View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17723_high_11 (Length: 418)
Name: NF17723_high_11
Description: NF17723
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17723_high_11 |
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Alignment Details
Target: chr8 (Bit Score: 376; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 376; E-Value: 0
Query Start/End: Original strand, 10 - 401
Target Start/End: Complemental strand, 128314 - 127923
Alignment:
| Q |
10 |
aagaaaataatagcacaaaatctgctagtatttggacagaatgaaccaaatttgcctagtatttggctttttaatatgacaacctttcacaaattcaaaa |
109 |
Q |
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| T |
128314 |
aagaaaataatagcacaaaatctgctagtatttggacagaatgaaccaaatttgcctagtatttggctttttaatatgacaacctttcacaaattcaaaa |
128215 |
T |
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| Q |
110 |
atgggtaacgtaaataacatttatgagaacgagttcattatactacttttattcccgagtacacctgaatagttttttgaagaggttatcgcacatcctc |
209 |
Q |
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| T |
128214 |
atgggtaacgtaaataacatttatgagaacgagttcattatactacttttattcccgtgtacacctgaatagttttttgaagaggttatcgcacatcctc |
128115 |
T |
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| Q |
210 |
caccgccggcctaaatatatagattattgtcaaaaagttctattcagaaattattataattctttcagcgtttaaactactgctacaaaacacaatatat |
309 |
Q |
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| T |
128114 |
cacagccggcctaaatatatagattattgtcaaaaagttctattcagaaattattataattctttcagcgtttaaactactgctacaaaacacaatatag |
128015 |
T |
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| Q |
310 |
aagaaaataacataagattccattttatatatcttcaacagatcccgaatatacctttaccactctatatatctccaacaaaacctgtaagt |
401 |
Q |
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| T |
128014 |
aagaaaataacataagattccatcttatatatcttcaacagatcccgaatatacctttaccactctatatatctccaacaaaacctgtaagt |
127923 |
T |
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