View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17723_low_2 (Length: 671)

Name: NF17723_low_2
Description: NF17723
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17723_low_2
NF17723_low_2
[»] chr4 (21 HSPs)
chr4 (19-582)||(5035063-5035628)
chr4 (46-534)||(2533805-2534294)
chr4 (19-522)||(2525259-2525763)
chr4 (23-510)||(2490641-2491130)
chr4 (46-435)||(2518821-2519212)
chr4 (46-302)||(2486021-2486286)
chr4 (155-353)||(2467212-2467413)
chr4 (214-346)||(2547221-2547353)
chr4 (229-352)||(2621417-2621540)
chr4 (229-274)||(2361217-2361262)
chr4 (225-274)||(2381641-2381690)
chr4 (225-274)||(2391269-2391318)
chr4 (234-274)||(12124594-12124634)
chr4 (46-109)||(2467446-2467509)
chr4 (244-274)||(2482529-2482559)
chr4 (293-347)||(5106632-5106686)
chr4 (390-435)||(2477156-2477201)
chr4 (293-345)||(2367981-2368033)
chr4 (218-269)||(2393836-2393888)
chr4 (470-510)||(2460107-2460147)
chr4 (470-506)||(2482279-2482315)


Alignment Details
Target: chr4 (Bit Score: 319; Significance: 1e-180; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 319; E-Value: 1e-180
Query Start/End: Original strand, 19 - 582
Target Start/End: Complemental strand, 5035628 - 5035063
Alignment:
Q  19 tcttggtcaaaatctccaaagctacactccctttccttaatcgtctctttgaaaggttccctaatattacatcacttaatatcactctctctccttaagg 118  Q
    ||||||||||||||||  | || ||| |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| || |  | |     
T  5035628 tcttggtcaaaatctctgaggcaacaatccctttccttagtcgtctctttgaaaggttccctaatattacatcactcaatatcactctcacttccaatgc 5035529  T
Q  119 --gggaccgagaagccgacctcggcgagtttctagcccaaatctctacttcccctttagacctcaaatcactcactctctaccaccctgacagtgtgcct 216  Q
      ||  |||||||||  |||||||||||||||||||  |||||||  ||||||||||| |||||||||| |||||||| |||||| ||| ||| || |||    
T  5035528 ctggtcccgagaagctcacctcggcgagtttctagcgaaaatctccgcttcccctttaaacctcaaatcgctcactctttaccacgctgtcagggttcct 5035429  T
Q  217 gaaaatgagttccgagctttgtccaagaagatgaaaaatttgacatctctcacttgttatcaaatgagatttatcaacaagaatgatctcaacatcattg 316  Q
    ||||||||||| |||||||||||| |||||||||||| ||| || |||||| |||||||||||||||||||||||||||||||||||||   | | ||||    
T  5035428 gaaaatgagttgcgagctttgtccgagaagatgaaaagtttaacgtctctcgcttgttatcaaatgagatttatcaacaagaatgatcttttcttgattg 5035329  T
Q  317 ctgattgtttcccttccctcgaagaactcatccttaccgacactggttgtccccataattgtgctatagatagtgatgatcgattcctggcgcttcccaa 416  Q
    |||||||||||||||  ||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||    
T  5035328 ctgattgtttccctttactcgaagaactaatccttactgatactggttgtccccataattgtgctatagatagtgatgatcaattcttagcgcttcccaa 5035229  T
Q  417 actccgcaggattgctttaactcgcaataacgtctgtgggcactcaattaagaatctctgcaagaactgtgaacttcttcaagaggtcaaagtggttggt 516  Q
    |||||||||||||||||||||| | |||| |||| |||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  5035228 actccgcaggattgctttaactagtaatatcgtcggtggacactcaattaagaatctctgcaagagctgtgaccttcttcaagaggtcaaagtggttggt 5035129  T
Q  517 ggttgtgttgcacgatatgcgtatggtggtcctcttcctcctctacaatatcaatgagcttcaaga 582  Q
    ||| ||||||| |||||||||| | ||||||||| |||||||||||||||||||||||||||||||    
T  5035128 ggtcgtgttgctcgatatgcgtttcgtggtcctcgtcctcctctacaatatcaatgagcttcaaga 5035063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 297; E-Value: 1e-166
Query Start/End: Original strand, 46 - 534
Target Start/End: Complemental strand, 2534294 - 2533805
Alignment:
Q  46 tccctttccttaatcgtctctttgaaaggttccctaatattacatcacttaatatcactctctctccttaagggg---gaccgagaagccgacctc-ggc 141  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||| |  |  | ||   | ||| |||||||||||| |||    
T  2534294 tccctttccttaaccgcctctttgaaaggttccctaatattacatcactcaatatcactctctcccgatgggtggtttgtccgtgaagccgacctctggc 2534195  T
Q  142 gagtttctagcccaaatctctacttcccctttagacctcaaatcactcactctctaccaccctgacagtgtgcctgaaaatgagttccgagctttgtcca 241  Q
    |||||||||||| || ||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  2534194 gagtttctagccgaactctctacttccactttagacctcaaatcgctcactctctaccaccctgacagtgttcctgaaaatgagttccgagctttgtcca 2534095  T
Q  242 agaagatgaaaaatttgacatctctcacttgttatcaaatgagatttatcaacaagaatgatctcaacatcattgctgattgtttcccttccctcgaaga 341  Q
    |||||||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||  | | |||||||||||||||||||  || |||||    
T  2534094 agaagatgaaaaatttaacatctctcacttgttatcaaatgagctatatcaacaagaatgatctcttcttgattgctgattgtttccctttacttgaaga 2533995  T
Q  342 actcatccttaccgacactggttgtccccataattgtgctatagatagtgatgatcgattcctggcgcttcccaaactccgcaggattgctttaactcgc 441  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||      
T  2533994 actcatccttaccgactctggttgtccccataattgtgcgatagatagtgatgatcaattcttggcgcttcccaaactccgcaggattgctttaactcat 2533895  T
Q  442 aataacgtctgtgggcactcaattaagaatctctgcaagaactgtgaacttcttcaagaggtcaaagtggttggtggttgtgttgcacgatat 534  Q
    |||| |||| ||| |||||||||||| ||||||||||||||||||||    ||||||||| |||||||||||||||||||  |||||||||||    
T  2533894 aatatcgtcagtgagcactcaattaaaaatctctgcaagaactgtga---ccttcaagagctcaaagtggttggtggttgctttgcacgatat 2533805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 19 - 522
Target Start/End: Complemental strand, 2525763 - 2525259
Alignment:
Q  19 tcttggtcaaaatctccaaagctacactccctttccttaatcgtctctttgaaaggttccctaatattacatcacttaatatcactctctctc-cttaa- 116  Q
    ||||||||| ||||||||| || ||  ||||||| ||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||| ||  |     
T  2525763 tcttggtcacaatctccaatgcaactatcccttttcttaatcgtctctttgaaaggttccctaacattgcatcactcaatatcactctctctctctcgat 2525664  T
Q  117 --gggggaccgagaagccgacctcggcgagtttctagcccaaatctctacttcccctttagacctcaaatcactcactctctaccaccctgacagtgtgc 214  Q
      ||||| ||||||||| |||||| | |||||||||  ||||||||| |||| |||||||||||||||||| |||||||||||||||||   ||  || |    
T  2525663 gcgggggcccgagaagctgacctcagtgagtttctaaaccaaatctccactttccctttagacctcaaatcgctcactctctaccacccccccaaggttc 2525564  T
Q  215 ctgaaaatgagttccgagctttgtccaagaagatgaaaaatttgacatctctcacttgttatcaaatgagatttatcaacaagaatgatctcaacatcat 314  Q
    || |||||||||| || | |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||   | ||||    
T  2525563 ctcaaaatgagttgcgtgttttgtccaagaaaatgaaaaatttgacatctctcacttgttatcaactgagatttattaacaagaatgatctgctcttcat 2525464  T
Q  315 tgctgattgtttcccttccctcgaagaactcatccttaccgacactggttgtccccataattgtgctatagatagtgatgatcgattcctggcgcttccc 414  Q
    ||||||||||||||||   ||||||||||||||||||||||||||||||||||    ||| ||||  |||||||||||||||| |||| |||||||||||    
T  2525463 tgctgattgtttccctctactcgaagaactcatccttaccgacactggttgtcgtagtaactgtgtgatagatagtgatgatcaattcttggcgcttccc 2525364  T
Q  415 aaactccgcaggattgctttaactcgcaataacgtctgtgggcactcaattaagaatctctgcaagaactgtgaacttcttcaagaggtcaaagtggttg 514  Q
    |||||||||||||||||||||||||  | || ||   ||   |||||| ||||||||||||||| |||||||||    ||||||||||||||||||||||    
T  2525363 aaactccgcaggattgctttaactcatactatcgcgggtcaacactcagttaagaatctctgcaggaactgtga---ccttcaagaggtcaaagtggttg 2525267  T
Q  515 gtggttgt 522  Q
    ||||||||    
T  2525266 gtggttgt 2525259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 23 - 510
Target Start/End: Complemental strand, 2491130 - 2490641
Alignment:
Q  23 ggtcaaaatctccaaagctacactccctttccttaatcgtctctttgaaaggttccctaatattacatcacttaatatcactctctct--ccttaagggg 120  Q
    ||||| ||||||| | || ||| ||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||| ||||||  ||   |  ||    
T  2491130 ggtcacaatctccgatgcaacaatccctttccttaatcgtctctttgaaaggttccctaacattacatcaatcaatatcaccctctcttcccgatacagg 2491031  T
Q  121 gaccgagaagccgacctcggcgagtttctagcccaaatctctacttcccctttagacctcaaatcactcactctctaccaccctgacagtgtgcctgaaa 220  Q
     ||| |||||  |||||| ||||| |||| |  |||||||| |||| |||||| ||||||||||| ||| |||||||| | ||   ||| || || | ||    
T  2491030 aacctagaagttgacctcagcgagcttcttggacaaatctccactttccctttggacctcaaatcgctcgctctctacgagccaatcagggttcccgcaa 2490931  T
Q  221 atgagttccgagctttgtccaagaagatgaaaaatttgacatctctcacttgttatcaaatgagatttatcaacaagaatgatctcaacatcattgctga 320  Q
    |||| || ||||||||||||  || |||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||    | ||||||||    
T  2490930 atgaattgcgagctttgtccgggacgatgaaaaatttgacatctctcacttgttatcgaatgaggtttatcaacaagaatgatctcttttttattgctga 2490831  T
Q  321 ttgtttcccttccctcgaagaactcatccttaccgacactggttgtccccataattgtgctatagatagtgatgatcgattcctggcgcttcccaaactc 420  Q
    |||||||||||  ||||| ||||||||||| |||||||  |||  |||||| |||| ||   |||| | |||||||| |||  ||| |||||||||||||    
T  2490830 ttgtttccctttactcgacgaactcatcctaaccgacaacggtaatccccaaaattatgtgctagacaatgatgatcaattattggtgcttcccaaactc 2490731  T
Q  421 cgcaggattgctttaactcgcaataacgtctgtgggcactcaattaagaatctctgcaagaactgtgaacttcttcaagaggtcaaagtg 510  Q
    |||| |||||||||| |||  |||  | |  ||   |||||| ||||  ||||||||||||||||||| ||||||||||||| |||||||    
T  2490730 cgcaagattgctttatctcttaatttcattggtaatcactcagttaaagatctctgcaagaactgtgaccttcttcaagaggccaaagtg 2490641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 46 - 435
Target Start/End: Complemental strand, 2519212 - 2518821
Alignment:
Q  46 tccctttccttaatcgtctctttgaaaggttccctaatattacatcacttaatatcactctctctccttaagg--gggaccgagaagccgacctcggcga 143  Q
    ||||||||||| ||||||||||||| |||||||| ||  |||||||||| || |||||||||||| |  |||   ||  |||||||| | ||||| ||||    
T  2519212 tccctttccttcatcgtctctttgataggttccccaacgttacatcactcaacatcactctctcttcccaagacaggctccgagaagacaacctcagcga 2519113  T
Q  144 gtttctagcccaaatctctacttcccctttagacctcaaatcactcactctctaccaccctgacagtgtgcctgaaaatgagttccgagctttgtccaag 243  Q
    | ||||| || |||| |  |||| |||||||||||||| ||| |||||||||||||| |||  ||   | ||| || | | ||| | |||||||||  |     
T  2519112 gcttctaaccaaaatatgcactttccctttagacctcatatcgctcactctctaccatcctatcacccttcctaaagaagggttgcaagctttgtctcaa 2519013  T
Q  244 aagatgaaaaatttgacatctctcacttgttatcaaatgagatttatcaacaagaatgatctcaacatcattgctgattgtttcccttccctcgaagaac 343  Q
    || |||||||||||||||| ||||||||||||| |||||| || |||| ||||||||||||||  | |||||||||||||||||||||  ||| ||||||    
T  2519012 aacatgaaaaatttgacatatctcacttgttattaaatgaaatatatccacaagaatgatctcttcttcattgctgattgtttccctttactcaaagaac 2518913  T
Q  344 tcatccttaccgacactggttgtccccataattgtgctatagatagtgatgatcgattcctggcgcttcccaaactccgcaggattgcttta 435  Q
    ||||||||||||| ||   || | || || |||  |  ||||||| ||||  || |||| |||||||||| |||||||||| ||||||||||    
T  2518912 tcatccttaccgataccatttataccaatgatttggtgatagatattgattttcaattcttggcgcttcctaaactccgcaagattgcttta 2518821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 46 - 302
Target Start/End: Complemental strand, 2486286 - 2486021
Alignment:
Q  46 tccctttccttaatcgtctctttgaaaggttccctaatattacatcacttaatatcactctctctccttaagg--gggaccgagaagccgacctcggcga 143  Q
    ||||||||||| ||||||||||| |  ||||||||||| ||||||| |  ||||||||||||||| |  |||   || || |||||   |||||||||||    
T  2486286 tccctttccttcatcgtctcttttatgggttccctaatgttacatcccacaatatcactctctcttcccaagacaggaacagagaaagtgacctcggcga 2486187  T
Q  144 gtttctagcccaaatctctacttcccctttagacctcaaatcactcactctctaccaccctgacagtgtgcctgaaaatgagttccgagctttgtccaag 243  Q
    | ||||  | || ||||| |||| |||||| |||||||||||||||||||||||| | ||   |||  | |||| |||||   | ||||||||||||||     
T  2486186 gcttcttacacatatctccactttccctttggacctcaaatcactcactctctacgagcccatcaggcttcctgcaaatgctctgcgagctttgtccaaa 2486087  T
Q  244 aagatgaaaaatttgacatctc-------tcacttgttatcaaatgagatttatcaacaagaatga 302  Q
    ||||||||||||||||||||||       ||| ||||||| |||| ||||||||||||||||||||    
T  2486086 aagatgaaaaatttgacatctctcaatagtcaattgttataaaattagatttatcaacaagaatga 2486021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 155 - 353
Target Start/End: Complemental strand, 2467413 - 2467212
Alignment:
Q  155 aaatctctacttcccctttagacctcaaatcactcactctctaccaccctgacagtgtgcctgaaaatgagttccgagctttgtccaagaagatgaaaaa 254  Q
    ||||||| |||| |||||| ||||||||||| |||||||||||||||||    |  || |||| | ||| ||| |||||||| |||||  ||||||||||    
T  2467413 aaatctccactttccctttggacctcaaatccctcactctctaccaccccataacggttcctgcagatgggttgcgagctttctccaaagagatgaaaaa 2467314  T
Q  255 tttgacatctctcacttgttatcaaatgagatt---tatcaacaagaatgatctcaacatcattgctgattgtttcccttccctcgaagaactcatcctt 351  Q
    ||||||||| ||||||||||| | |||    ||   |||| ||||||| |||||   | |||||||||||||||||||||  |||||||| |||||||||    
T  2467313 tttgacatcactcacttgttaccgaattgcttttgatatcgacaagaacgatcttttcttcattgctgattgtttccctttactcgaagagctcatcctt 2467214  T
Q  352 ac 353  Q
    ||    
T  2467213 ac 2467212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 214 - 346
Target Start/End: Complemental strand, 2547353 - 2547221
Alignment:
Q  214 cctgaaaatgagttccgagctttgtccaagaagatgaaaaatttgacatctctcacttgttatcaaatgagatttatcaacaagaatgatctcaacatca 313  Q
    |||| ||||| ||| |||||||||||  | ||||||||||||||||| ||||||| |||||   |||| |  ||||||| |||||||||| |   | |||    
T  2547353 cctgcaaatgggttgcgagctttgtctgaaaagatgaaaaatttgacgtctctcatttgttccaaaatcacctttatcagcaagaatgatttattcttca 2547254  T
Q  314 ttgctgattgtttcccttccctcgaagaactca 346  Q
    ||||||||||||||||||  || ||||||||||    
T  2547253 ttgctgattgtttccctttacttgaagaactca 2547221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 229 - 352
Target Start/End: Original strand, 2621417 - 2621540
Alignment:
Q  229 cgagctttgtccaagaagatgaaaaatttgacatctctcacttgttatcaaatgagatttatcaacaagaatgatctcaacatcattgctgattgtttcc 328  Q
    |||||||| ||||| || ||||||||||||||||||||||||||||| | ||| |     |||  ||||||||||||   | || |||||||||||||||    
T  2621417 cgagctttctccaaaaatatgaaaaatttgacatctctcacttgttaccgaattaataaaatccgcaagaatgatctattcttccttgctgattgtttcc 2621516  T
Q  329 cttccctcgaagaactcatcctta 352  Q
    |||  ||||||||||||| |||||    
T  2621517 ctttactcgaagaactcaacctta 2621540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 229 - 274
Target Start/End: Original strand, 2361217 - 2361262
Alignment:
Q  229 cgagctttgtccaagaagatgaaaaatttgacatctctcacttgtt 274  Q
    |||||||||||||| || ||||||||||||||||||||||||||||    
T  2361217 cgagctttgtccaaaaaaatgaaaaatttgacatctctcacttgtt 2361262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 225 - 274
Target Start/End: Original strand, 2381641 - 2381690
Alignment:
Q  225 gttccgagctttgtccaagaagatgaaaaatttgacatctctcacttgtt 274  Q
    |||||||||||||||||| ||||||||||||||||| ||||| |||||||    
T  2381641 gttccgagctttgtccaaaaagatgaaaaatttgacctctcttacttgtt 2381690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 225 - 274
Target Start/End: Original strand, 2391269 - 2391318
Alignment:
Q  225 gttccgagctttgtccaagaagatgaaaaatttgacatctctcacttgtt 274  Q
    |||||||||||||||||| ||||||||||||||||| ||||| |||||||    
T  2391269 gttccgagctttgtccaaaaagatgaaaaatttgacctctcttacttgtt 2391318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 234 - 274
Target Start/End: Complemental strand, 12124634 - 12124594
Alignment:
Q  234 tttgtccaagaagatgaaaaatttgacatctctcacttgtt 274  Q
    ||||||||| ||||||||||||||||| |||||||||||||    
T  12124634 tttgtccaaaaagatgaaaaatttgacctctctcacttgtt 12124594  T

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Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 109
Target Start/End: Complemental strand, 2467509 - 2467446
Alignment:
Q  46 tccctttccttaatcgtctctttgaaaggttccctaatattacatcacttaatatcactctctc 109  Q
    ||||||| ||| |||||||||||||||||||||| ||||| | |||| || | |||||||||||    
T  2467509 tccctttacttcatcgtctctttgaaaggttccccaatatcagatcaattgacatcactctctc 2467446  T

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Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 244 - 274
Target Start/End: Complemental strand, 2482559 - 2482529
Alignment:
Q  244 aagatgaaaaatttgacatctctcacttgtt 274  Q
    |||||||||||||||||||||||||||||||    
T  2482559 aagatgaaaaatttgacatctctcacttgtt 2482529  T

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Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 293 - 347
Target Start/End: Original strand, 5106632 - 5106686
Alignment:
Q  293 acaagaatgatctcaacatcattgctgattgtttcccttccctcgaagaactcat 347  Q
    |||||| |||||||  | |||||||||||||||||||||  ||||||||||||||    
T  5106632 acaagagtgatctcttcttcattgctgattgtttccctttactcgaagaactcat 5106686  T

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Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 390 - 435
Target Start/End: Complemental strand, 2477201 - 2477156
Alignment:
Q  390 tgatgatcgattcctggcgcttcccaaactccgcaggattgcttta 435  Q
    |||||||| |||  ||||||||||||||||||||| ||||||||||    
T  2477201 tgatgatcaattgttggcgcttcccaaactccgcaagattgcttta 2477156  T

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Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 293 - 345
Target Start/End: Original strand, 2367981 - 2368033
Alignment:
Q  293 acaagaatgatctcaacatcattgctgattgtttcccttccctcgaagaactc 345  Q
    |||||| |||||||  | |||||||||||||||||||||  ||||||||||||    
T  2367981 acaagagtgatctcttcttcattgctgattgtttccctttactcgaagaactc 2368033  T

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Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 218 - 269
Target Start/End: Original strand, 2393836 - 2393888
Alignment:
Q  218 aaaatgagttccgagctttgtccaagaagatg-aaaaatttgacatctctcac 269  Q
    |||||| ||| |||||||||||| | |||||| ||||||||||||||||||||    
T  2393836 aaaatgggttgcgagctttgtcccaaaagatgaaaaaatttgacatctctcac 2393888  T

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Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 470 - 510
Target Start/End: Complemental strand, 2460147 - 2460107
Alignment:
Q  470 atctctgcaagaactgtgaacttcttcaagaggtcaaagtg 510  Q
    |||| |||||||| ||||| |||||||||||||||||||||    
T  2460147 atctttgcaagaattgtgaccttcttcaagaggtcaaagtg 2460107  T

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Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 470 - 506
Target Start/End: Complemental strand, 2482315 - 2482279
Alignment:
Q  470 atctctgcaagaactgtgaacttcttcaagaggtcaa 506  Q
    |||||||| |||||||||| |||||||||||||||||    
T  2482315 atctctgccagaactgtgagcttcttcaagaggtcaa 2482279  T

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