View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17723_low_35 (Length: 238)

Name: NF17723_low_35
Description: NF17723
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17723_low_35
NF17723_low_35
[»] chr8 (5 HSPs)
chr8 (17-238)||(2262696-2262917)
chr8 (153-235)||(12310816-12310898)
chr8 (155-220)||(4360859-4360924)
chr8 (165-220)||(15081540-15081595)
chr8 (170-230)||(38082156-38082216)
[»] chr5 (6 HSPs)
chr5 (149-228)||(7775378-7775457)
chr5 (149-238)||(19677179-19677268)
chr5 (149-220)||(15385003-15385074)
chr5 (165-220)||(35160792-35160847)
chr5 (149-235)||(14504073-14504159)
chr5 (151-228)||(36844381-36844458)
[»] chr3 (5 HSPs)
chr3 (153-228)||(19949964-19950039)
chr3 (153-228)||(4580524-4580599)
chr3 (149-235)||(33528061-33528147)
chr3 (152-238)||(20398451-20398537)
chr3 (188-238)||(40593530-40593580)
[»] chr1 (4 HSPs)
chr1 (153-220)||(12033603-12033670)
chr1 (149-228)||(11923851-11923930)
chr1 (189-238)||(12486314-12486363)
chr1 (165-202)||(45085734-45085771)
[»] chr7 (7 HSPs)
chr7 (152-238)||(32936812-32936898)
chr7 (149-228)||(22572437-22572516)
chr7 (153-238)||(31577235-31577320)
chr7 (149-202)||(32053028-32053081)
chr7 (165-219)||(5678277-5678331)
chr7 (165-219)||(5703329-5703383)
chr7 (165-228)||(4303411-4303475)
[»] chr2 (3 HSPs)
chr2 (151-228)||(5841265-5841342)
chr2 (165-238)||(44675286-44675359)
chr2 (165-220)||(8781482-8781537)
[»] chr4 (2 HSPs)
chr4 (156-238)||(13085147-13085230)
chr4 (151-238)||(54239558-54239645)
[»] scaffold0251 (1 HSPs)
scaffold0251 (173-220)||(8228-8275)
[»] chr6 (4 HSPs)
chr6 (149-228)||(8568639-8568718)
chr6 (154-228)||(26571111-26571185)
chr6 (149-228)||(19474671-19474750)
chr6 (170-230)||(13645879-13645939)


Alignment Details
Target: chr8 (Bit Score: 218; Significance: 1e-120; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 17 - 238
Target Start/End: Complemental strand, 2262917 - 2262696
Alignment:
Q  17 agtttgaagggtgaaagtgcaaaatgggactctgaactattaaaatgatttaactcttcctttctatgtatattcatttagtcattatccggtataggtt 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2262917 agtttgaagggtgaaagtgcaaaatgggactctgaactattaaaatgatttaactcttcctttctatgtatattcatttagtcattatccggtataggtt 2262818  T
Q  117 attttcctttgtttttacgctaaaattgacgcaggattagcaagcgtaaaacttaaaagataaacaaacaagttgcaagcgacaaacttgtaaaataagg 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2262817 attttcctttgtttttacgctaaaattgacgcaggattagcaagcgtaaaacttaaaagataaacaaacaagttgcaagcgacaaacttgtaaaataagg 2262718  T
Q  217 gttttcggaatctaccaaaatt 238  Q
    ||||||||||||||| ||||||    
T  2262717 gttttcggaatctactaaaatt 2262696  T

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Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 153 - 235
Target Start/End: Complemental strand, 12310898 - 12310816
Alignment:
Q  153 ttagcaagcgtaaaacttaaaagataaacaaacaagttgcaagcgacaaacttgtaaaataagggttttcggaatctaccaaa 235  Q
    ||||||||||  |||| ||||||||||||| ||||||||  |||||||||| | ||||| ||||||||||||| || ||||||    
T  12310898 ttagcaagcgctaaacctaaaagataaacagacaagttgtgagcgacaaacctataaaaaaagggttttcggagtccaccaaa 12310816  T

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Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 220
Target Start/End: Original strand, 4360859 - 4360924
Alignment:
Q  155 agcaagcgtaaaacttaaaagataaacaaacaagttgcaagcgacaaacttgtaaaataagggttt 220  Q
    ||||||||| |||||||||||||||| | ||| |||||||||||||||| | | |||||| |||||    
T  4360859 agcaagcgttaaacttaaaagataaatacacaggttgcaagcgacaaacctattaaataaaggttt 4360924  T

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Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 220
Target Start/End: Complemental strand, 15081595 - 15081540
Alignment:
Q  165 aaacttaaaagataaacaaacaagttgcaagcgacaaacttgtaaaataagggttt 220  Q
    |||| ||| ||||||||| |||||||||||||||||||| ||| |||||| |||||    
T  15081595 aaacataagagataaacacacaagttgcaagcgacaaacctgtcaaataaaggttt 15081540  T

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Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 230
Target Start/End: Original strand, 38082156 - 38082216
Alignment:
Q  170 taaaagataaacaaacaagttgcaagcgacaaacttgtaaaataagggttttcggaatcta 230  Q
    ||||||||||||| | | |||||||||||||||| | | ||||||||||||  ||||||||    
T  38082156 taaaagataaacagagaggttgcaagcgacaaacatatcaaataagggtttcaggaatcta 38082216  T

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Target: chr5 (Bit Score: 44; Significance: 4e-16; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 149 - 228
Target Start/End: Complemental strand, 7775457 - 7775378
Alignment:
Q  149 aggattagcaagcgtaaaacttaaaagataaacaaacaagttgcaagcgacaaacttgtaaaataagggttttcggaatc 228  Q
    ||||||||||| ||| |||| ||||||||||||| ||||||||||||| |||||| ||| ||| || |||||||||||||    
T  7775457 aggattagcaaacgttaaacctaaaagataaacagacaagttgcaagctacaaacctgtcaaaaaaaggttttcggaatc 7775378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 238
Target Start/End: Original strand, 19677179 - 19677268
Alignment:
Q  149 aggattagcaagcgtaaaacttaaaagataaacaaacaagttgcaagcgacaaacttgtaaaataagggttttcggaatctaccaaaatt 238  Q
    ||||||||||||||  || | ||||||||||||| | | |||||||||||||||| | | |||||||||||||||||||| |||| ||||    
T  19677179 aggattagcaagcgctaagcctaaaagataaacagataggttgcaagcgacaaacctttcaaataagggttttcggaatccaccagaatt 19677268  T

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Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 220
Target Start/End: Original strand, 15385003 - 15385074
Alignment:
Q  149 aggattagcaagcgtaaaacttaaaagataaacaaacaagttgcaagcgacaaacttgtaaaataagggttt 220  Q
    ||||||||| ||||| |||||||||||||||||| |||||| ||||||||||||  ||| ||||||| ||||    
T  15385003 aggattagcgagcgttaaacttaaaagataaacagacaagtcgcaagcgacaaatctgttaaataagagttt 15385074  T

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Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 220
Target Start/End: Original strand, 35160792 - 35160847
Alignment:
Q  165 aaacttaaaagataaacaaacaagttgcaagcgacaaacttgtaaaataagggttt 220  Q
    |||| ||||||||||||| ||||||||||| |||||||| ||| ||||||||||||    
T  35160792 aaacctaaaagataaacagacaagttgcaaacgacaaacctgtcaaataagggttt 35160847  T

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Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 149 - 235
Target Start/End: Complemental strand, 14504159 - 14504073
Alignment:
Q  149 aggattagcaagcgtaaaacttaaaagataaacaaacaagttgcaagcgacaaacttgtaaaataagggttttcggaatctaccaaa 235  Q
    |||| |||||||||| |||| || ||||||||  |||||||||||||| |||||| ||| ||||||| |||| | ||||| ||||||    
T  14504159 aggaatagcaagcgttaaacctagaagataaaacaacaagttgcaagcaacaaacctgtcaaataagagtttccagaatccaccaaa 14504073  T

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Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 228
Target Start/End: Original strand, 36844381 - 36844458
Alignment:
Q  151 gattagcaagcgtaaaacttaaaagataaacaaacaagttgcaagcgacaaacttgtaaaataagggttttcggaatc 228  Q
    |||||| |||| | |||| ||| |||||| || |||| ||| ||| ||||||| ||| ||||||||||||||||||||    
T  36844381 gattaggaagcattaaacctaagagataatcagacaaattgtaagtgacaaacctgtcaaataagggttttcggaatc 36844458  T

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Target: chr3 (Bit Score: 44; Significance: 4e-16; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 153 - 228
Target Start/End: Complemental strand, 19950039 - 19949964
Alignment:
Q  153 ttagcaagcgtaaaacttaaaagataaacaaacaagttgcaagcgacaaacttgtaaaataagggttttcggaatc 228  Q
    ||||||||||  |||| ||||||||||||| | |||||||||||||||||||| | ||||||||||||| ||||||    
T  19950039 ttagcaagcgctaaacctaaaagataaacagataagttgcaagcgacaaacttatcaaataagggtttttggaatc 19949964  T

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Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 153 - 228
Target Start/End: Complemental strand, 4580599 - 4580524
Alignment:
Q  153 ttagcaagcgtaaaacttaaaagataaacaaacaagttgcaagcgacaaacttgtaaaataagggttttcggaatc 228  Q
    ||||||||||  |||| ||||||||||||| ||| |||||||||||||||| | | |||||||||||||| |||||    
T  4580599 ttagcaagcgctaaacctaaaagataaacacacaggttgcaagcgacaaacctatcaaataagggttttcagaatc 4580524  T

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Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 149 - 235
Target Start/End: Original strand, 33528061 - 33528147
Alignment:
Q  149 aggattagcaagcgtaaaacttaaaagataaacaaacaagttgcaagcgacaaacttgtaaaataagggttttcggaatctaccaaa 235  Q
    ||||||||||||||| |||||||||||||||| | | |||||| ||||||||||| ||| ||| | ||| ||  |||||||||||||    
T  33528061 aggattagcaagcgttaaacttaaaagataaatagataagttgtaagcgacaaacctgtcaaaaagggggttatggaatctaccaaa 33528147  T

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Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 20398451 - 20398537
Alignment:
Q  152 attagcaagcgtaaaacttaaaagataaacaaacaagttgcaagcgacaaacttgtaaaataagggttttcggaatctaccaaaatt 238  Q
    |||||||||||  |||| |||||||||| || ||| ||||||||||||||   | | |||||||||||||||||||| |||| ||||    
T  20398451 attagcaagcgctaaacctaaaagataatcagacaggttgcaagcgacaagtctatcaaataagggttttcggaatccaccagaatt 20398537  T

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Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 188 - 238
Target Start/End: Original strand, 40593530 - 40593580
Alignment:
Q  188 gttgcaagcgacaaacttgtaaaataagggttttcggaatctaccaaaatt 238  Q
    |||||||||||||||| | | |||||||||||||||||||| |||||||||    
T  40593530 gttgcaagcgacaaacctatcaaataagggttttcggaatccaccaaaatt 40593580  T

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Target: chr1 (Bit Score: 44; Significance: 4e-16; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 153 - 220
Target Start/End: Original strand, 12033603 - 12033670
Alignment:
Q  153 ttagcaagcgtaaaacttaaaagataaacaaacaagttgcaagcgacaaacttgtaaaataagggttt 220  Q
    ||||||| ||| ||| ||||||||||||||||||||||||||||||||||||| | |||| |||||||    
T  12033603 ttagcaaacgtcaaaattaaaagataaacaaacaagttgcaagcgacaaacttatcaaatgagggttt 12033670  T

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Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 228
Target Start/End: Complemental strand, 11923930 - 11923851
Alignment:
Q  149 aggattagcaagcgtaaaacttaaaagataaacaaacaagttgcaagcgacaaacttgtaaaataagggttttcggaatc 228  Q
    ||||||||||| ||| |||| ||||||||||||| |||| ||| |||| |||||| ||| ||| || |||||||| ||||    
T  11923930 aggattagcaaacgttaaacctaaaagataaacagacaatttgtaagctacaaacctgtcaaaaaaaggttttcgtaatc 11923851  T

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Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 12486314 - 12486363
Alignment:
Q  189 ttgcaagcgacaaacttgtaaaataagggttttcggaatctaccaaaatt 238  Q
    |||||||| |||||| | | |||||||||||||||||||| |||||||||    
T  12486314 ttgcaagcaacaaacctattaaataagggttttcggaatccaccaaaatt 12486363  T

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Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 202
Target Start/End: Complemental strand, 45085771 - 45085734
Alignment:
Q  165 aaacttaaaagataaacaaacaagttgcaagcgacaaa 202  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  45085771 aaacctaaaagataaacagacaagttgcaagcgacaaa 45085734  T

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Target: chr7 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 32936812 - 32936898
Alignment:
Q  152 attagcaagcgtaaaacttaaaagataaacaaacaagttgcaagcgacaaacttgtaaaataagggttttcggaatctaccaaaatt 238  Q
    ||||||||| || |||| ||| || |||||||||||||||||||| |||||  ||| |||||||||||||||||||| |||| ||||    
T  32936812 attagcaagagttaaacctaagagctaaacaaacaagttgcaagcaacaaatatgtcaaataagggttttcggaatccaccataatt 32936898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 228
Target Start/End: Original strand, 22572437 - 22572516
Alignment:
Q  149 aggattagcaagcgtaaaacttaaaagataaacaaacaagttgcaagcgacaaacttgtaaaataagggttttcggaatc 228  Q
    ||||||||||||||  |||| ||||||||||||| ||| |||||||||||||||  | | |||||||||||| |||||||    
T  22572437 aggattagcaagcgctaaacctaaaagataaacagacaggttgcaagcgacaaatctatcaaataagggtttccggaatc 22572516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 238
Target Start/End: Original strand, 31577235 - 31577320
Alignment:
Q  153 ttagcaagcgtaaaacttaaaagataaacaaacaagttgcaagcgacaaacttgtaaaataagggttttcggaatctaccaaaatt 238  Q
    ||||||||||  |||| ||||||||||||| | | |||||||||||||||| | | |||||||||||| || |||| |||| ||||    
T  31577235 ttagcaagcgctaaacctaaaagataaacagataggttgcaagcgacaaacctatcaaataagggtttccgaaatccaccagaatt 31577320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 202
Target Start/End: Complemental strand, 32053081 - 32053028
Alignment:
Q  149 aggattagcaagcgtaaaacttaaaagataaacaaacaagttgcaagcgacaaa 202  Q
    ||||||||||||||  |||| ||||||||||||| |||| ||||||||||||||    
T  32053081 aggattagcaagcgctaaacctaaaagataaacagacaatttgcaagcgacaaa 32053028  T

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Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 219
Target Start/End: Original strand, 5678277 - 5678331
Alignment:
Q  165 aaacttaaaagataaacaaacaagttgcaagcgacaaacttgtaaaataagggtt 219  Q
    |||||||||||||||||| ||| ||| |||||||||||| | | |||||||||||    
T  5678277 aaacttaaaagataaacagacaggttacaagcgacaaacctatcaaataagggtt 5678331  T

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Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 219
Target Start/End: Original strand, 5703329 - 5703383
Alignment:
Q  165 aaacttaaaagataaacaaacaagttgcaagcgacaaacttgtaaaataagggtt 219  Q
    |||||||||||||||||| ||| ||| |||||||||||| | | |||||||||||    
T  5703329 aaacttaaaagataaacagacaggttacaagcgacaaacctatcaaataagggtt 5703383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 228
Target Start/End: Complemental strand, 4303475 - 4303411
Alignment:
Q  165 aaacttaaaagataaacaaacaagttgcaagcga-caaacttgtaaaataagggttttcggaatc 228  Q
    |||| ||||||||||| | ||| ||||||||||| ||||| | | ||||||||||||||||||||    
T  4303475 aaacctaaaagataaagagacaggttgcaagcgaacaaacctattaaataagggttttcggaatc 4303411  T

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Target: chr2 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 151 - 228
Target Start/End: Complemental strand, 5841342 - 5841265
Alignment:
Q  151 gattagcaagcgtaaaacttaaaagataaacaaacaagttgcaagcgacaaacttgtaaaataagggttttcggaatc 228  Q
    ||||||||| ||  |||| ||||||||||||| |||||||||||||||||||| ||| ||| | ||||||||||||||    
T  5841342 gattagcaaacgctaaacctaaaagataaacatacaagttgcaagcgacaaacctgtcaaacaggggttttcggaatc 5841265  T

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Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 238
Target Start/End: Original strand, 44675286 - 44675359
Alignment:
Q  165 aaacttaaaagataaacaaacaagttgcaagcgacaaacttgtaaaataagggttttcggaatctaccaaaatt 238  Q
    |||| ||||||||||||| ||| ||||||||||||| || | | |||||||||||||||||||| |||| ||||    
T  44675286 aaacataaaagataaacagacaggttgcaagcgacatacctatcaaataagggttttcggaatccaccagaatt 44675359  T

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Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 220
Target Start/End: Complemental strand, 8781537 - 8781482
Alignment:
Q  165 aaacttaaaagataaacaaacaagttgcaagcgacaaacttgtaaaataagggttt 220  Q
    |||| ||||||||||||| ||| |||||||||||||||| | | ||||||||||||    
T  8781537 aaacctaaaagataaacagacaggttgcaagcgacaaacctatcaaataagggttt 8781482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 156 - 238
Target Start/End: Original strand, 13085147 - 13085230
Alignment:
Q  156 gcaagcgtaaaacttaaaagataaacaaacaagttgcaagcgacaaacttgt-aaaataagggttttcggaatctaccaaaatt 238  Q
    |||||||  |||| ||||||||||||  ||| |||||||||||||||| | | ||||||||||||||||||||| |||||||||    
T  13085147 gcaagcgctaaacctaaaagataaactgacaggttgcaagcgacaaacctatcaaaataagggttttcggaatccaccaaaatt 13085230  T

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Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 238
Target Start/End: Complemental strand, 54239645 - 54239558
Alignment:
Q  151 gattagcaagcgtaaaacttaaaagataaacaaacaagttgcaagcgacaaacttgtaaaataagggttttcggaatctaccaaaatt 238  Q
    ||||||||| ||  |||| ||| || |||||| ||||||| |||| ||||||| | | |||||||||||||||||||| |||||||||    
T  54239645 gattagcaaacgctaaacctaagaggtaaacagacaagttacaagggacaaacctatcaaataagggttttcggaatccaccaaaatt 54239558  T

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Target: scaffold0251 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 220
Target Start/End: Original strand, 8228 - 8275
Alignment:
Q  173 aagataaacaaacaagttgcaagcgacaaacttgtaaaataagggttt 220  Q
    |||||||||| |||||||||||||||||||| ||| ||||||||||||    
T  8228 aagataaacagacaagttgcaagcgacaaacctgtcaaataagggttt 8275  T

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Target: chr6 (Bit Score: 36; Significance: 0.00000000002; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 228
Target Start/End: Original strand, 8568639 - 8568718
Alignment:
Q  149 aggattagcaagcgtaaaacttaaaagataaacaaacaagttgcaagcgacaaacttgtaaaataagggttttcggaatc 228  Q
    ||||||||||| ||  |||| ||||||||||||| ||||||||||||| |||||| ||| ||| ||  ||||||||||||    
T  8568639 aggattagcaaacgctaaacctaaaagataaacagacaagttgcaagctacaaacctgtcaaaaaaaagttttcggaatc 8568718  T

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Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 154 - 228
Target Start/End: Complemental strand, 26571185 - 26571111
Alignment:
Q  154 tagcaagcgtaaaacttaaaagataaacaaacaagttgcaagcgacaaacttgtaaaataagggttttcggaatc 228  Q
    |||||||||  |||||||||||||||| | ||| |||||||||||||||  | | ||||| ||||||||||||||    
T  26571185 tagcaagcgctaaacttaaaagataaatagacaggttgcaagcgacaaatctattaaataggggttttcggaatc 26571111  T

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Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 228
Target Start/End: Original strand, 19474671 - 19474750
Alignment:
Q  149 aggattagcaagcgtaaaacttaaaagataaacaaacaagttgcaagcgacaaacttgtaaaataagggttttcggaatc 228  Q
    ||||||||||||||  |||  ||||||||||||| | | |||||||| ||||||| | | ||||||||||||||| ||||    
T  19474671 aggattagcaagcgctaaagctaaaagataaacatataggttgcaagagacaaacctattaaataagggttttcgaaatc 19474750  T

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Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 230
Target Start/End: Original strand, 13645879 - 13645939
Alignment:
Q  170 taaaagataaacaaacaagttgcaagcgacaaacttgtaaaataagggttttcggaatcta 230  Q
    ||||||||||||| |||  |||||||| |||||| | | |||||||||||| |||||||||    
T  13645879 taaaagataaacagacagattgcaagcaacaaacctattaaataagggtttccggaatcta 13645939  T

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