View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17726_low_11 (Length: 311)
Name: NF17726_low_11
Description: NF17726
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17726_low_11 |
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Alignment Details
Target: chr3 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 16 - 296
Target Start/End: Original strand, 54176999 - 54177279
Alignment:
| Q |
16 |
atccaagctacacagaatttgtcaacaaaataaccactggtgtaagtactgccttataaacctgatcctctatgtatgctaacaaatatgatttaggttc |
115 |
Q |
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| T |
54176999 |
atccaagctacacagaatttgtcaacaaaataaccactggtgtaagtactgccttataaacctgatcctctatgtatgctaacaaatatgatttagcttc |
54177098 |
T |
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| Q |
116 |
attattttatcccaactggctaattctttcatttataccgaacagtattttgatggcgctgttggtgacattgccattgtcacaaatcggacaaggattg |
215 |
Q |
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| T |
54177099 |
attattttatcccaactggctaattctttcatttataccgaacagtattttgatggcgctgtaggtgacattgccattgtcacaaatcggacaaggattg |
54177198 |
T |
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| Q |
216 |
tagattttacacagccatatgctgcatctggacttgttgtggttgctccttttaagaagatcaattctggtggatggtctt |
296 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| |
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| T |
54177199 |
tagattttacacagccatatgctgcatctggacttgttgtggttgctccttttaagaagatcaattccggcggatggtctt |
54177279 |
T |
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