View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17727_high_17 (Length: 237)
Name: NF17727_high_17
Description: NF17727
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17727_high_17 |
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Alignment Details
Target: chr6 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 34860435 - 34860215
Alignment:
| Q |
1 |
ctattctaaagatattagctggcttgccttgacatgatggataatttctctattttaacagtcttccctacataaatactactctatctgttgcataaat |
100 |
Q |
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| T |
34860435 |
ctattctaaagatattagctggcttgccttgacatgatggataatttctctattttaacagtcttccctacataaatactactctatctgttgcataaat |
34860336 |
T |
|
| Q |
101 |
actctcggtgatgaatccaccaagaaaatttgcaagtaaaccttcagaaaggaccaattttgttttttaatcctagtactacataactttgtttgcactt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34860335 |
actctcggtgatgaatccaccaagaaaatttgcaagtaaaccttcagaaaggaccaattttgttttttaatcctagtactacataactttgtttgcactt |
34860236 |
T |
|
| Q |
201 |
gttgtattgaatgtcattcat |
221 |
Q |
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||||||||||||||||||||| |
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| T |
34860235 |
gttgtattgaatgtcattcat |
34860215 |
T |
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