View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17730_low_1 (Length: 201)

Name: NF17730_low_1
Description: NF17730
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17730_low_1
NF17730_low_1
[»] scaffold0243 (1 HSPs)
scaffold0243 (1-169)||(5932-6100)
[»] scaffold0530 (1 HSPs)
scaffold0530 (1-169)||(844-1011)
[»] chr7 (20 HSPs)
chr7 (1-173)||(16219523-16219694)
chr7 (1-159)||(810950-811108)
chr7 (1-169)||(47831951-47832119)
chr7 (1-169)||(67887-68056)
chr7 (1-169)||(16056471-16056638)
chr7 (1-168)||(9389507-9389674)
chr7 (1-159)||(18005789-18005947)
chr7 (26-169)||(16324174-16324316)
chr7 (1-149)||(22073059-22073207)
chr7 (54-163)||(15754704-15754813)
chr7 (1-159)||(44014318-44014474)
chr7 (54-158)||(15113140-15113243)
chr7 (54-159)||(15116677-15116781)
chr7 (1-149)||(12901468-12901620)
chr7 (54-159)||(11995850-11995954)
chr7 (54-159)||(28505121-28505225)
chr7 (54-163)||(34200980-34201088)
chr7 (123-159)||(9751370-9751406)
chr7 (123-159)||(39267466-39267502)
chr7 (123-159)||(2529873-2529909)
[»] chr3 (22 HSPs)
chr3 (1-169)||(14234631-14234801)
chr3 (1-169)||(15471068-15471235)
chr3 (62-163)||(32307872-32307973)
chr3 (54-155)||(12934135-12934236)
chr3 (1-169)||(1465220-1465388)
chr3 (54-157)||(49667906-49668009)
chr3 (49-157)||(16103971-16104079)
chr3 (54-157)||(1644505-1644608)
chr3 (54-159)||(16097525-16097630)
chr3 (54-159)||(9513104-9513209)
chr3 (54-159)||(9521079-9521184)
chr3 (54-155)||(49389453-49389554)
chr3 (67-159)||(13210148-13210240)
chr3 (5-149)||(37250996-37251140)
chr3 (92-159)||(12171925-12171992)
chr3 (42-149)||(22110180-22110287)
chr3 (46-149)||(43927322-43927425)
chr3 (123-163)||(12340017-12340057)
chr3 (123-159)||(14665870-14665906)
chr3 (123-159)||(14735383-14735419)
chr3 (123-159)||(4588608-4588644)
chr3 (123-159)||(14669025-14669061)
[»] chr5 (13 HSPs)
chr5 (1-159)||(21329316-21329474)
chr5 (1-159)||(21501974-21502133)
chr5 (1-149)||(26011864-26012012)
chr5 (34-169)||(21741354-21741489)
chr5 (54-159)||(19669094-19669199)
chr5 (62-159)||(21565747-21565844)
chr5 (54-159)||(22959354-22959459)
chr5 (1-159)||(20026760-20026917)
chr5 (54-150)||(19660666-19660762)
chr5 (123-159)||(5888996-5889032)
chr5 (123-159)||(22120013-22120049)
chr5 (46-133)||(22178064-22178151)
chr5 (123-159)||(24767157-24767193)
[»] chr8 (17 HSPs)
chr8 (1-149)||(6520511-6520659)
chr8 (1-169)||(38855061-38855229)
chr8 (1-149)||(21285741-21285889)
chr8 (1-159)||(21673847-21674005)
chr8 (62-159)||(26355519-26355616)
chr8 (1-159)||(23760661-23760822)
chr8 (54-159)||(5866097-5866201)
chr8 (54-150)||(17141110-17141206)
chr8 (54-159)||(21491189-21491293)
chr8 (1-132)||(983248-983382)
chr8 (5-149)||(17266821-17266965)
chr8 (1-133)||(20498707-20498839)
chr8 (83-159)||(21249607-21249682)
chr8 (46-149)||(22364851-22364954)
chr8 (51-149)||(37116543-37116641)
chr8 (83-159)||(21255445-21255520)
chr8 (46-149)||(24353210-24353316)
[»] scaffold0138 (2 HSPs)
scaffold0138 (1-169)||(13083-13250)
scaffold0138 (46-149)||(18066-18169)
[»] chr4 (17 HSPs)
chr4 (1-169)||(39706098-39706266)
chr4 (1-169)||(15190459-15190627)
chr4 (1-169)||(15099492-15099660)
chr4 (1-149)||(12288038-12288186)
chr4 (54-157)||(12774194-12774297)
chr4 (54-159)||(8846569-8846674)
chr4 (46-149)||(46640285-46640387)
chr4 (1-159)||(16596789-16596946)
chr4 (5-149)||(53081979-53082124)
chr4 (117-159)||(22634033-22634075)
chr4 (123-159)||(24029006-24029042)
chr4 (124-159)||(3332151-3332186)
chr4 (83-150)||(15552039-15552106)
chr4 (123-157)||(20157112-20157146)
chr4 (1-133)||(13695-13827)
chr4 (125-159)||(32851642-32851676)
chr4 (123-159)||(13812629-13812665)
[»] chr1 (16 HSPs)
chr1 (1-159)||(22921688-22921847)
chr1 (1-169)||(49261483-49261651)
chr1 (1-159)||(35981507-35981665)
chr1 (1-168)||(20636992-20637159)
chr1 (54-169)||(52927792-52927906)
chr1 (70-159)||(22237841-22237930)
chr1 (1-159)||(21861389-21861546)
chr1 (54-159)||(12271744-12271848)
chr1 (63-159)||(20248481-20248577)
chr1 (54-149)||(21754232-21754327)
chr1 (62-157)||(33681212-33681307)
chr1 (1-159)||(21896078-21896232)
chr1 (5-149)||(16368115-16368259)
chr1 (54-159)||(20918798-20918902)
chr1 (5-149)||(50686761-50686905)
chr1 (123-159)||(28194269-28194305)
[»] chr6 (13 HSPs)
chr6 (1-154)||(23019550-23019703)
chr6 (54-163)||(1561498-1561607)
chr6 (54-155)||(19652390-19652491)
chr6 (1-155)||(22080562-22080717)
chr6 (1-149)||(19668516-19668664)
chr6 (27-149)||(27333114-27333236)
chr6 (27-149)||(27393854-27393976)
chr6 (54-159)||(28496294-28496398)
chr6 (54-159)||(29808705-29808809)
chr6 (46-133)||(9098370-9098457)
chr6 (51-149)||(35008344-35008442)
chr6 (70-133)||(20109354-20109417)
chr6 (51-149)||(23076926-23077024)
[»] scaffold0476 (1 HSPs)
scaffold0476 (1-159)||(12910-13068)
[»] scaffold0078 (1 HSPs)
scaffold0078 (1-159)||(10671-10828)
[»] scaffold0034 (1 HSPs)
scaffold0034 (1-169)||(32679-32846)
[»] scaffold0207 (1 HSPs)
scaffold0207 (1-159)||(2464-2623)
[»] chr2 (9 HSPs)
chr2 (1-163)||(28406120-28406283)
chr2 (3-136)||(25175995-25176129)
chr2 (54-157)||(22134038-22134141)
chr2 (1-154)||(7556-7709)
chr2 (1-132)||(18786748-18786879)
chr2 (5-149)||(23791423-23791567)
chr2 (54-159)||(22459381-22459485)
chr2 (5-149)||(23207426-23207570)
chr2 (46-149)||(25109078-25109181)
[»] scaffold0333 (2 HSPs)
scaffold0333 (1-159)||(6755-6913)
scaffold0333 (1-159)||(14135-14293)
[»] scaffold1257 (1 HSPs)
scaffold1257 (1-159)||(2037-2196)
[»] scaffold0621 (2 HSPs)
scaffold0621 (1-159)||(6678-6836)
scaffold0621 (54-159)||(8666-8770)
[»] scaffold0023 (3 HSPs)
scaffold0023 (1-159)||(100517-100676)
scaffold0023 (1-159)||(39993-40152)
scaffold0023 (83-154)||(101619-101690)
[»] scaffold0556 (2 HSPs)
scaffold0556 (1-173)||(8159-8330)
scaffold0556 (1-159)||(6953-7111)
[»] scaffold0008 (1 HSPs)
scaffold0008 (1-169)||(14506-14675)
[»] scaffold0028 (2 HSPs)
scaffold0028 (1-159)||(62338-62496)
scaffold0028 (54-163)||(132848-132957)
[»] scaffold0020 (1 HSPs)
scaffold0020 (46-169)||(15641-15764)
[»] scaffold0218 (2 HSPs)
scaffold0218 (1-169)||(7886-8050)
scaffold0218 (54-159)||(29100-29204)
[»] scaffold0211 (1 HSPs)
scaffold0211 (54-159)||(28630-28735)
[»] scaffold0102 (1 HSPs)
scaffold0102 (1-169)||(19407-19576)
[»] scaffold0010 (1 HSPs)
scaffold0010 (54-159)||(130102-130207)
[»] scaffold0278 (1 HSPs)
scaffold0278 (1-159)||(5786-5944)
[»] scaffold0021 (2 HSPs)
scaffold0021 (1-149)||(136196-136345)
scaffold0021 (1-149)||(144904-145053)
[»] scaffold0628 (1 HSPs)
scaffold0628 (51-159)||(2623-2731)
[»] scaffold0040 (1 HSPs)
scaffold0040 (1-149)||(103467-103615)
[»] scaffold0125 (1 HSPs)
scaffold0125 (54-159)||(45611-45716)
[»] scaffold0555 (1 HSPs)
scaffold0555 (54-173)||(10347-10465)
[»] scaffold1765 (1 HSPs)
scaffold1765 (1-159)||(1226-1383)
[»] scaffold0413 (1 HSPs)
scaffold0413 (1-149)||(12712-12860)
[»] scaffold0150 (1 HSPs)
scaffold0150 (54-163)||(32288-32387)
[»] scaffold0001 (1 HSPs)
scaffold0001 (54-159)||(160880-160985)
[»] scaffold1351 (1 HSPs)
scaffold1351 (5-149)||(154-298)
[»] scaffold1137 (1 HSPs)
scaffold1137 (74-159)||(2122-2207)
[»] scaffold0037 (2 HSPs)
scaffold0037 (54-143)||(22509-22598)
scaffold0037 (123-159)||(80152-80188)
[»] scaffold1984 (1 HSPs)
scaffold1984 (62-169)||(334-440)
[»] scaffold0507 (1 HSPs)
scaffold0507 (57-148)||(7888-7979)
[»] scaffold0261 (2 HSPs)
scaffold0261 (1-159)||(15802-15959)
scaffold0261 (126-159)||(18163-18196)
[»] scaffold0175 (1 HSPs)
scaffold0175 (54-163)||(34317-34425)
[»] scaffold0420 (1 HSPs)
scaffold0420 (5-149)||(6111-6255)
[»] scaffold0022 (2 HSPs)
scaffold0022 (5-149)||(78470-78614)
scaffold0022 (51-111)||(128837-128896)
[»] scaffold0161 (1 HSPs)
scaffold0161 (54-159)||(2265-2369)
[»] scaffold0046 (1 HSPs)
scaffold0046 (62-159)||(11494-11591)
[»] scaffold0810 (1 HSPs)
scaffold0810 (123-159)||(3196-3232)
[»] scaffold0347 (1 HSPs)
scaffold0347 (123-159)||(293-329)
[»] scaffold0139 (1 HSPs)
scaffold0139 (46-146)||(38507-38607)
[»] scaffold0080 (1 HSPs)
scaffold0080 (53-149)||(19713-19809)
[»] scaffold0075 (2 HSPs)
scaffold0075 (123-159)||(8114-8150)
scaffold0075 (1-133)||(53393-53525)
[»] scaffold1403 (1 HSPs)
scaffold1403 (46-149)||(739-841)
[»] scaffold0192 (1 HSPs)
scaffold0192 (126-159)||(10178-10211)
[»] scaffold0006 (2 HSPs)
scaffold0006 (51-148)||(97201-97297)
scaffold0006 (51-148)||(106479-106575)
[»] scaffold0166 (1 HSPs)
scaffold0166 (123-159)||(9654-9690)
[»] scaffold0016 (1 HSPs)
scaffold0016 (123-159)||(207339-207375)
[»] scaffold0737 (1 HSPs)
scaffold0737 (46-149)||(1626-1729)
[»] scaffold0098 (1 HSPs)
scaffold0098 (125-159)||(26855-26889)


Alignment Details
Target: scaffold0243 (Bit Score: 137; Significance: 9e-72; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 137; E-Value: 9e-72
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 6100 - 5932
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  6100 atgtatatacaattatataacattagcaacaacattagattatacaattcaggcttactgaaacaataacagcaagataaataacttagtttttaacctc 6001  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtgactgg 169  Q
    |||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  6000 caagatcaactaacatcaacttgcgcgacaaagatcgcatttaacctaaacaaggcattatgtaactgg 5932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 121; Significance: 3e-62; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 1011 - 844
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    |||||||||||||||||||||||| ||||||| |||||||| ||||||| |||||||||||||||| |||| ||||||||||||||||||||||||| ||    
T  1011 atgtatatacaattatataacattagcaacaacattagatt-tacaattcaggcttactgaaacaacaacaacaagataaataacttagtttctaacttc 913  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtgactgg 169  Q
    |||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  912 caagatcaactaacatcaacttgcgcgacaaagatcgcatttaacctaaacaaggcattatgtaactgg 844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 117; Significance: 8e-60; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 16219694 - 16219523
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    ||||||||||||||||||||||||  |||||| ||||||||||| |||| |||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  16219694 atgtatatacaattatataacattaacaacaacattagattatataattcaggcttactgaaacaacaacagcaagataaacaacttagtttctaacctc 16219595  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtgactggacaa 173  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||| ||| ||| |||||    
T  16219594 caagatcaactaacatcaacttgtgcgacaaagatcgcatttaacct-aacaaggcattctgtaactagacaa 16219523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 811108 - 810950
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||| ||    
T  811108 atgtatatacaattatataacattagcaacaacattagattatacaattcaggcttactgaaactacaacagcaagataaataacttagtttctaacttc 811009  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcatt 159  Q
    |||| ||||||  |||||| ||| ||||||||||||||||||||| |||||||||||||    
T  811008 caaggtcaactcacatcaacttgcgcgacaaagatcgcatttaacttaaacaaggcatt 810950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 47831951 - 47832119
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    |||||||||||||||||||||||| || |||| |||||||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  47831951 atgtatatacaattatataacattagcgacaacattagattatacaattcaggcttactgaaacaacaacaacaagataaataacttagtttctaacctc 47832050  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtgactgg 169  Q
    |||||||||||  |||||| | || ||||||||||| |||||||||||||||| ||||| ||| |||||    
T  47832051 caagatcaactcacatcaactcgtccgacaaagatcacatttaacctaaacaaagcattctgtaactgg 47832119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 67887 - 68056
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatac-aatttaggcttactgaaacaataacagcaagataaataacttagtttctaacct 99  Q
    ||||||||||||||||||||||||  |||||| ||||||| |||  |||| ||||| |||||||||| |||||||||||||| |||||||||||||||||    
T  67887 atgtatatacaattatataacattaacaacaacattagatcatattaattcaggctcactgaaacaacaacagcaagataaacaacttagtttctaacct 67986  T
Q  100 ccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtgactgg 169  Q
    | ||||||||||  |||||| ||||||||||| ||||||||||||||||||||||||||| ||| |||||    
T  67987 ctaagatcaactcacatcaacttgtgcgacaaggatcgcatttaacctaaacaaggcattctgtaactgg 68056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 16056471 - 16056638
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    ||||||||||||||||||||||||  |||||| |||||||||||  ||| |||||||| ||||||| |||| ||||||||| |||||||||||| |||||    
T  16056471 atgtatatacaattatataacattaacaacaacattagattatatcattcaggcttaccgaaacaacaacatcaagataaacaacttagtttcttacctc 16056570  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtgactgg 169  Q
     ||||||||||  |||||| | |||| |||||||||||||||||||| ||||||||||| ||| |||||    
T  16056571 taagatcaactcacatcaactcgtgctacaaagatcgcatttaacct-aacaaggcattctgtaactgg 16056638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 9389674 - 9389507
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    ||||||||||||||||||||||||  || |||||||||| ||||||||  |||||||||| ||  | |||| |||| |  ||||||||||||||||||||    
T  9389674 atgtatatacaattatataacattatcatcaatattagaatatacaatccaggcttactggaatgacaacatcaaggtcgataacttagtttctaacctc 9389575  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtgactg 168  Q
    |||||||||||  |||||| | ||| |||||||||||| |||||||||||||||||||| ||| ||||    
T  9389574 caagatcaactcacatcaactcgtgtgacaaagatcgcttttaacctaaacaaggcattctgtaactg 9389507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 18005789 - 18005947
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatac-aatttaggcttactgaaacaataacagcaagataaataacttagtttctaacct 99  Q
    ||||||||||||||||||| ||||  |||||| ||||||| |||  || | |||||||||||||||| |||||||||||||| |||||||||||||||||    
T  18005789 atgtatatacaattatataccattaacaacaacattagatcatattaaatcaggcttactgaaacaacaacagcaagataaacaacttagtttctaacct 18005888  T
Q  100 ccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcatt 159  Q
    | ||||||||||   ||||| ||||||||||||||||||| ||| |||||||||||||||    
T  18005889 ctaagatcaactcatatcaacttgtgcgacaaagatcgca-ttatcctaaacaaggcatt 18005947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 26 - 169
Target Start/End: Original strand, 16324174 - 16324316
Alignment:
Q  26 gcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtg 125  Q
    ||||||| |||||||||||||||| |||||||||||||||| ||||||||||| || |||||||||||||||||| ||||||||||  |||||| |  ||    
T  16324174 gcaacaacattagattatacaattcaggcttactgaaacaacaacagcaagatcaacaacttagtttctaacctctaagatcaactcacatcaactcatg 16324273  T
Q  126 cgacaaagatcgcatttaacctaaacaaggcattatgtgactgg 169  Q
    |||||| |||| |||||||||| ||||||||||| ||| |||||    
T  16324274 cgacaaggatcacatttaacct-aacaaggcattctgtaactgg 16324316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 22073059 - 22073207
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    |||||||| |||||||||||||||  |||||| ||||||||||| |||| |||||||||||||||| |||| ||||| ||| ||||||||| || ||||     
T  22073059 atgtatatgcaattatataacattaacaacaacattagattatataattcaggcttactgaaacaacaacatcaagacaaacaacttagttccttacctg 22073158  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaa 149  Q
     ||||||||||  |||||| | ||||||||| |||||||||||||||||    
T  22073159 taagatcaactcacatcaactcgtgcgacaaggatcgcatttaacctaa 22073207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 54 - 163
Target Start/End: Complemental strand, 15754813 - 15754704
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| || | ||||||||||||||| |||||||||||||||||| | ||||||||  |||||| | |||||||||||||||||||||||||||||||    
T  15754813 cttactggaatattaacagcaagataaacaacttagtttctaacctctaggatcaactcacatcaactcgtgcgacaaagatcgcatttaacctaaacaa 15754714  T
Q  154 ggcattatgt 163  Q
    ||||||||||    
T  15754713 ggcattatgt 15754704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 44014318 - 44014474
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatac-aatttaggcttactgaaacaataacagcaagataaataacttagtttctaacct 99  Q
    ||||||||||| ||||||| ||||   ||||| ||||||| |||  |||| |||||||||||||||| |||||||||||||  |||||||||| ||||||    
T  44014318 atgtatatacagttatataccattaaaaacaacattagatcatattaattcaggcttactgaaacaacaacagcaagataac-aacttagtttttaacct 44014416  T
Q  100 ccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcatt 159  Q
    |   ||||||||  |||||| | ||||||||| |||||||||||||||||||||||||||    
T  44014417 ct--gatcaactcacatcaattcgtgcgacaatgatcgcatttaacctaaacaaggcatt 44014474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 54 - 158
Target Start/End: Original strand, 15113140 - 15113243
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||||||||||||||||| |||||| |||||||||||| ||||| ||||||||||  |||||| | ||||||||||| || |||||||||| |||||    
T  15113140 cttactgaaacaataacagcaggataaacaacttagtttcttacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacct-aacaa 15113238  T
Q  154 ggcat 158  Q
    |||||    
T  15113239 ggcat 15113243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 54 - 159
Target Start/End: Original strand, 15116677 - 15116781
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||||||||||||||| | |||||| |||||||||||| ||||| ||||||||||  |||||| | ||||||||||| || |||||||||| |||||    
T  15116677 cttactgaaacaataacagtaggataaacaacttagtttcttacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacct-aacaa 15116775  T
Q  154 ggcatt 159  Q
    ||||||    
T  15116776 ggcatt 15116781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 12901468 - 12901620
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttc-ta---a 96  Q
    |||||||||||| |||||||||||  |||||| |||| || ||| |||| | |||||||||||||| |||| ||||||||| ||||||||||| ||   |    
T  12901468 atgtatatacaactatataacattaacaacaacattaaatcatataattcaagcttactgaaacaacaacaacaagataaacaacttagtttcctacgta 12901567  T
Q  97 cctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaa 149  Q
    |||||||||||||||  |||||| | || |||||||  || ||||||||||||    
T  12901568 cctccaagatcaactcacatcaactcgtacgacaaatgtcacatttaacctaa 12901620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 54 - 159
Target Start/End: Complemental strand, 11995954 - 11995850
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    |||||||  ||| |||||||||| |||| || ||||||||||||||| ||||| ||||  |||||| | |  ||||||||||||||||||||||||| ||    
T  11995954 cttactgggacattaacagcaaggtaaacaaattagtttctaacctctaagataaactcacatcaactcgaacgacaaagatcgcatttaacctaaa-aa 11995856  T
Q  154 ggcatt 159  Q
    ||||||    
T  11995855 ggcatt 11995850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 54 - 159
Target Start/End: Complemental strand, 28505225 - 28505121
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| |||| | ||| |||| |||| |||||||||||||||||| ||||||||||  |||||| | |  |||||||||||||||| |||||||| ||    
T  28505225 cttactggaacattgacaacaaggtaaacaacttagtttctaacctctaagatcaactcacatcaactcgaacgacaaagatcgcattcaacctaaa-aa 28505127  T
Q  154 ggcatt 159  Q
    ||||||    
T  28505126 ggcatt 28505121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 54 - 163
Target Start/End: Original strand, 34200980 - 34201088
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    |||||||  ||| |||||||||| |||| |||||||||||||||||| ||||||||||  |||||| | |   ||||  |||||||||||||||||| ||    
T  34200980 cttactgggacattaacagcaaggtaaacaacttagtttctaacctctaagatcaactcacatcaactcgaatgacagggatcgcatttaacctaaa-aa 34201078  T
Q  154 ggcattatgt 163  Q
    ||||||||||    
T  34201079 ggcattatgt 34201088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 159
Target Start/End: Complemental strand, 9751406 - 9751370
Alignment:
Q  123 gtgcgacaaagatcgcatttaacctaaacaaggcatt 159  Q
    |||||||||||||||||||||| ||||||||||||||    
T  9751406 gtgcgacaaagatcgcatttaaactaaacaaggcatt 9751370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 159
Target Start/End: Complemental strand, 39267502 - 39267466
Alignment:
Q  123 gtgcgacaaagatcgcatttaacctaaacaaggcatt 159  Q
    |||||||||||||| ||||||||||||||||||||||    
T  39267502 gtgcgacaaagatcacatttaacctaaacaaggcatt 39267466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 159
Target Start/End: Complemental strand, 2529909 - 2529873
Alignment:
Q  123 gtgcgacaaagatcgcatttaacctaaacaaggcatt 159  Q
    |||||||||||||||||||||||||||  ||||||||    
T  2529909 gtgcgacaaagatcgcatttaacctaattaaggcatt 2529873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 112; Significance: 8e-57; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 14234631 - 14234801
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaa--acaataacagcaagataaataacttagtttctaacc 98  Q
    |||||||||||||||||||||||| ||||||| ||||||||| |||||| ||||||||||||  |||| |||| ||||||||||||||||||||||||||    
T  14234631 atgtatatacaattatataacattagcaacaacattagattaaacaattcaggcttactgaacaacaacaacaacaagataaataacttagtttctaacc 14234730  T
Q  99 tccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtgactgg 169  Q
    |||||||||||||| |||||| |||| ||||||||||| |||||||||||||||||||||| ||| |||||    
T  14234731 tccaagatcaactaacatcaacttgttcgacaaagatcacatttaacctaaacaaggcattctgtaactgg 14234801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 15471068 - 15471235
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    ||||||||||||||||||||||||  ||||||  |||||| ||| |||| |||||||||||||||| |||| ||||||||| ||||||||||||||||||    
T  15471068 atgtatatacaattatataacattaacaacaac-ttagatcatataattcaggcttactgaaacaacaacaacaagataaacaacttagtttctaacctc 15471166  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtgactgg 169  Q
    |||||||| ||| |||||| | ||||||||||||||||||||||||||||||| ||||| ||| |||||    
T  15471167 caagatcatctaacatcaactcgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgg 15471235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 62 - 163
Target Start/End: Original strand, 32307872 - 32307973
Alignment:
Q  62 aacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattat 161  Q
    |||||| ||||||||||||| |||||||||||||||||| ||||||||||  |||||| | |||||||||||||||||||||||||||||||||||||||    
T  32307872 aacaatgacagcaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcattat 32307971  T
Q  162 gt 163  Q
    ||    
T  32307972 gt 32307973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 54 - 155
Target Start/End: Complemental strand, 12934236 - 12934135
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| |||||| ||||||||||||| |||||||||||||||||| ||||||||||  |||||| | |||||||||||||||||||||||||||||||    
T  12934236 cttactggaacaatgacagcaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaagatcgcatttaacctaaacaa 12934137  T
Q  154 gg 155  Q
    ||    
T  12934136 gg 12934135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 1465388 - 1465220
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    |||||||||||||| |||||||||  || ||| |||||| || |||||  |||||||||| ||  | | || |||| |||||||||||||||||||||||    
T  1465388 atgtatatacaattgtataacattatcatcaacattagaataaacaatccaggcttactggaatgacagcatcaaggtaaataacttagtttctaacctc 1465289  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtgactgg 169  Q
    |||||||||||  |||||| | |||||||||||||  | |||||||||||||||||||| ||| |||||    
T  1465288 caagatcaactcacatcaactcgtgcgacaaagattacttttaacctaaacaaggcattctgtaactgg 1465220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 54 - 157
Target Start/End: Complemental strand, 49668009 - 49667906
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| |||||| ||||||||||||| |||||||||||||||||| ||||||||||  |||||| | ||||||||||||||| |||||||||||||||    
T  49668009 cttactggaacaatgacagcaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaagatcgtatttaacctaaacaa 49667910  T
Q  154 ggca 157  Q
    ||||    
T  49667909 ggca 49667906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 49 - 157
Target Start/End: Original strand, 16103971 - 16104079
Alignment:
Q  49 ttaggcttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaaccta 148  Q
    |||| ||||||| ||||| |||||||||||||| |||||||||||||||||| ||||| ||||  |||||| | |||||||||||| |||||||||||||    
T  16103971 ttagtcttactggaacaacaacagcaagataaacaacttagtttctaacctctaagattaactcacatcaactcgtgcgacaaagagcgcatttaaccta 16104070  T
Q  149 aacaaggca 157  Q
    |||||||||    
T  16104071 aacaaggca 16104079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 54 - 157
Target Start/End: Complemental strand, 1644608 - 1644505
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| |||||||||| ||||||||| |||||||||||||||||| ||||||||||  |||||| | ||||||||| ||||||||||||| |||||||    
T  1644608 cttactggaacaataacaacaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaggatcgcatttaacttaaacaa 1644509  T
Q  154 ggca 157  Q
    ||||    
T  1644508 ggca 1644505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 54 - 159
Target Start/End: Original strand, 16097525 - 16097630
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| ||||| |||||||||||||| |||||||||||||| ||| ||||||||||  |||||| | ||||||||||||||||||||||| |||||||    
T  16097525 cttactggaacaacaacagcaagataaacaacttagtttctaatctctaagatcaactcacatcaactcgtgcgacaaagatcgcatttaacataaacaa 16097624  T
Q  154 ggcatt 159  Q
    | ||||    
T  16097625 gacatt 16097630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 54 - 159
Target Start/End: Original strand, 9513104 - 9513209
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| |||||||||| |||| |||| |||||||||||||||||| ||||| ||||  ||| || ||||||||||||||||||||||||| ||| |||    
T  9513104 cttactggaacaataacaacaaggtaaacaacttagtttctaacctctaagattaactcacataaacttgtgcgacaaagatcgcatttaacataagcaa 9513203  T
Q  154 ggcatt 159  Q
    ||||||    
T  9513204 ggcatt 9513209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 54 - 159
Target Start/End: Original strand, 9521079 - 9521184
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| |||||||||| |||| |||| |||||||||||||||||| ||||| ||||  ||| || ||||||||||||||||||||||||| ||| |||    
T  9521079 cttactggaacaataacaacaaggtaaacaacttagtttctaacctctaagattaactcacataaacttgtgcgacaaagatcgcatttaacataagcaa 9521178  T
Q  154 ggcatt 159  Q
    ||||||    
T  9521179 ggcatt 9521184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 54 - 155
Target Start/End: Complemental strand, 49389554 - 49389453
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| ||||| |||| ||||||||| |||||||||||||||||| |||||||||   |||||| | ||||||||| |||||||||||||||||||||    
T  49389554 cttactggaacaacaacaacaagataaacaacttagtttctaacctctaagatcaacacacatcaactcgtgcgacaaggatcgcatttaacctaaacaa 49389455  T
Q  154 gg 155  Q
    ||    
T  49389454 gg 49389453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 67 - 159
Target Start/End: Complemental strand, 13210240 - 13210148
Alignment:
Q  67 taacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcatt 159  Q
    ||||| ||||||||| |||||||||||||||||| | ||||||||  |||||| | |||||||||||||| ||||||||||||||||||||||    
T  13210240 taacaacaagataaacaacttagtttctaacctctaggatcaactcacatcaactcgtgcgacaaagatcacatttaacctaaacaaggcatt 13210148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 149
Target Start/End: Complemental strand, 37251140 - 37250996
Alignment:
Q  5 atatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctccaag 104  Q
    ||||||| |||||| |||||   ||||| || | || ||| |||| || ||||||| ||||| ||||| |||||||| |||||||||||| ||| |||||    
T  37251140 atatacatttatatcacattattaacaacatcaaatcatataattcagacttactggaacaacaacagtaagataaacaacttagtttcttacccccaag 37251041  T
Q  105 atcaactagcatcaaattgtgcgacaaagatcgcatttaacctaa 149  Q
    |||||||  |||||| | ||||||||||| || | ||||||||||    
T  37251040 atcaactcacatcaactcgtgcgacaaaggtcacttttaacctaa 37250996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 92 - 159
Target Start/End: Complemental strand, 12171992 - 12171925
Alignment:
Q  92 tctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcatt 159  Q
    ||||||||| ||||||||||  |||||| |||||||||||  ||||||||||||||||||||||||||    
T  12171992 tctaacctctaagatcaactcacatcaacttgtgcgacaagaatcgcatttaacctaaacaaggcatt 12171925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 42 - 149
Target Start/End: Complemental strand, 22110287 - 22110180
Alignment:
Q  42 atacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatt 141  Q
    |||||||| |||||||||||||||| ||||| |||||||  |||||||||||| |||  || ||||||||  |||||| | ||||||||||| || ||||    
T  22110287 atacaattcaggcttactgaaacaacaacagtaagataagcaacttagtttcttaccctcatgatcaactcacatcaattcgtgcgacaaaggtcacatt 22110188  T
Q  142 taacctaa 149  Q
     |||||||    
T  22110187 aaacctaa 22110180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 46 - 149
Target Start/End: Original strand, 43927322 - 43927425
Alignment:
Q  46 aatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaac 145  Q
    |||| |||||||||||||||| ||||| |||||||  |||||||||||| ||| ||| ||||||||  |||||| | ||||||||||| || |||||| |    
T  43927322 aattcaggcttactgaaacaacaacagtaagataagcaacttagtttcttacccccatgatcaactcacatcaactcgtgcgacaaaggtcacatttatc 43927421  T
Q  146 ctaa 149  Q
    ||||    
T  43927422 ctaa 43927425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 12340017 - 12340057
Alignment:
Q  123 gtgcgacaaagatcgcatttaacctaaacaaggcattatgt 163  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  12340017 gtgcgacaaagatcacatttaacctaaacaaggcattatgt 12340057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 123 - 159
Target Start/End: Original strand, 14665870 - 14665906
Alignment:
Q  123 gtgcgacaaagatcgcatttaacctaaacaaggcatt 159  Q
    |||||||||||||||||||||||||||||||||||||    
T  14665870 gtgcgacaaagatcgcatttaacctaaacaaggcatt 14665906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 123 - 159
Target Start/End: Original strand, 14735383 - 14735419
Alignment:
Q  123 gtgcgacaaagatcgcatttaacctaaacaaggcatt 159  Q
    |||||||||||||||||||||||||||||||||||||    
T  14735383 gtgcgacaaagatcgcatttaacctaaacaaggcatt 14735419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 159
Target Start/End: Complemental strand, 4588644 - 4588608
Alignment:
Q  123 gtgcgacaaagatcgcatttaacctaaacaaggcatt 159  Q
    ||||||||||| |||||||||||||||||||||||||    
T  4588644 gtgcgacaaagctcgcatttaacctaaacaaggcatt 4588608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 159
Target Start/End: Original strand, 14669025 - 14669061
Alignment:
Q  123 gtgcgacaaagatcgcatttaacctaaacaaggcatt 159  Q
    ||||||||||||||| |||||||||||||||||||||    
T  14669025 gtgcgacaaagatcgaatttaacctaaacaaggcatt 14669061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 111; Significance: 3e-56; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 21329474 - 21329316
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||| |||| ||||||||| |||||||||||| |||||    
T  21329474 atgtatatacaattatataacattagcaacaacattagattatacaattcaggcttactgaaacaacaacaacaagataaacaacttagtttcttacctc 21329375  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcatt 159  Q
     ||||||||||  |||||| | |||||||||||||||||||||||||||||||||||||    
T  21329374 taagatcaactcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcatt 21329316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 21502133 - 21501974
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatac-aatttaggcttactgaaacaataacagcaagataaataacttagttt-ctaacc 98  Q
    ||||||||||||||||||||||||  |||||| ||||||| |||  |||| |||||||||||||||| |||||||||||||| |||||||||| |||||     
T  21502133 atgtatatacaattatataacattaacaacaacattagatcatattaattcaggcttactgaaacaacaacagcaagataaacaacttagttttctaact 21502034  T
Q  99 tccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcatt 159  Q
    |||||||||||||| |||||| | |||||||||| |||||||||||||  |||||||||||    
T  21502033 tccaagatcaactaacatcaactcgtgcgacaaatatcgcatttaacc-caacaaggcatt 21501974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 26012012 - 26011864
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    |||||||||||||||||||||||   |||||| || |||||||| | || |||||||||||||||| || | ||||||||| ||||||||||||||||||    
T  26012012 atgtatatacaattatataacatcaacaacaacatcagattatatagttcaggcttactgaaacaacaataacaagataaacaacttagtttctaacctc 26011913  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaa 149  Q
    |||||||||||  |||||| | ||| |||||||||| ||||||||||||    
T  26011912 caagatcaactcacatcaactcgtgtgacaaagatcacatttaacctaa 26011864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 34 - 169
Target Start/End: Complemental strand, 21741489 - 21741354
Alignment:
Q  34 attagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaag 133  Q
    |||||| ||||||||  |||||||||| ||  | |||| |||| ||| ||||||||||||||||||||||||||||||  |||||| | |||||||||||    
T  21741489 attagaatatacaatccaggcttactggaatgacaacatcaaggtaattaacttagtttctaacctccaagatcaactcacatcaactcgtgcgacaaag 21741390  T
Q  134 atcgcatttaacctaaacaaggcattatgtgactgg 169  Q
    ||||| ||||||||||||||| |||||||| |||||    
T  21741389 atcgcttttaacctaaacaagacattatgtaactgg 21741354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 54 - 159
Target Start/End: Original strand, 19669094 - 19669199
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| ||||| |||| |||||||||  ||||||||||||||||| ||||||||||  |||||| |||||||||||  ||| |||||| |||||||||    
T  19669094 cttactggaacaacaacaacaagataaacgacttagtttctaacctctaagatcaactcacatcaacttgtgcgacaagaatcacatttatcctaaacaa 19669193  T
Q  154 ggcatt 159  Q
    ||||||    
T  19669194 ggcatt 19669199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 62 - 159
Target Start/End: Original strand, 21565747 - 21565844
Alignment:
Q  62 aacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcatt 159  Q
    ||||| |||| ||||||||| |||||||||||||||||| ||||||||||  |||||| | |||||||||||||||||||| || |||||||| ||||    
T  21565747 aacaacaacaacaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaagatcgcattttacataaacaagtcatt 21565844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 54 - 159
Target Start/End: Complemental strand, 22959459 - 22959354
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| ||||| |||| ||||||||| ||||| |||| ||||||| ||||||||||  |||||| |||||| ||||  ||||||||||||||||||||    
T  22959459 cttactggaacaaaaacaacaagataaacaacttggtttttaacctctaagatcaactcacatcaacttgtgcaacaagaatcgcatttaacctaaacaa 22959360  T
Q  154 ggcatt 159  Q
    ||||||    
T  22959359 ggcatt 22959354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 20026917 - 20026760
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    |||||||||||| |||||| ||||  |||||| |||| |  ||| |||| ||||||||||||||||  ||| ||||||||| |||||||||||| |||||    
T  20026917 atgtatatacaactatatagcattatcaacaacattaaaacatataattcaggcttactgaaacaactacaacaagataaacaacttagtttcttacctc 20026818  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcatt 159  Q
     ||||||||||  |||| | | ||||||||| | || ||||||| || |||||||||||    
T  20026817 taagatcaactcacatcgactcgtgcgacaacggtcacatttaagct-aacaaggcatt 20026760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 54 - 150
Target Start/End: Complemental strand, 19660762 - 19660666
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaa 150  Q
    ||||||| |||| |||||||||| |||| |||||||||||||||||| ||||||||||  |||||| | |  |||||||||| ||||| ||||||||    
T  19660762 cttactggaacattaacagcaaggtaaacaacttagtttctaacctctaagatcaactcacatcaactcgaacgacaaagattgcattcaacctaaa 19660666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 123 - 159
Target Start/End: Complemental strand, 5889032 - 5888996
Alignment:
Q  123 gtgcgacaaagatcgcatttaacctaaacaaggcatt 159  Q
    |||||||||||||||||||||||||||||||||||||    
T  5889032 gtgcgacaaagatcgcatttaacctaaacaaggcatt 5888996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 123 - 159
Target Start/End: Complemental strand, 22120049 - 22120013
Alignment:
Q  123 gtgcgacaaagatcgcatttaacctaaacaaggcatt 159  Q
    |||||||||||||||||||||||||||||||||||||    
T  22120049 gtgcgacaaagatcgcatttaacctaaacaaggcatt 22120013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 133
Target Start/End: Complemental strand, 22178151 - 22178064
Alignment:
Q  46 aatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaag 133  Q
    |||||||| |||||||||||| ||||| |||||||  |||||||||||| ||| ||| ||||||||  |||||| | ||| |||||||    
T  22178151 aatttaggtttactgaaacaacaacagtaagataagcaacttagtttcttacccccatgatcaactcacatcaactcgtgtgacaaag 22178064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 159
Target Start/End: Complemental strand, 24767193 - 24767157
Alignment:
Q  123 gtgcgacaaagatcgcatttaacctaaacaaggcatt 159  Q
    |||||||||||||| ||||||||||||||||||||||    
T  24767193 gtgcgacaaagatcacatttaacctaaacaaggcatt 24767157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 109; Significance: 5e-55; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 6520511 - 6520659
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  6520511 atgtatatacaattatataacattagcaacaacattagattatacaattcaggcttactgaaacaacaacagcaagataaataacttagtttctaacctc 6520610  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaa 149  Q
    |||||||||||  |||||| |  ||| ||||||||||||||||||||||    
T  6520611 caagatcaactcacatcaactcatgcaacaaagatcgcatttaacctaa 6520659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 38855229 - 38855061
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||| ||||  ||    
T  38855229 atgtatatacaattatataacattagcaacaacattagattatacaattcaggcttactgaaacaacaacagcaagataaacaacttagttcctaatgtc 38855130  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtgactgg 169  Q
    ||||||||| |  |||||| | |||||||||||||||  |||||||||| ||||||||| ||| |||||    
T  38855129 caagatcaattcacatcaactcgtgcgacaaagatcgtgtttaacctaagcaaggcattctgtaactgg 38855061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 21285741 - 21285889
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    ||||||||||||||||||| ||||  |||||||||||||||||| |||| |||||||||||||||| |||| |||||||||  ||||||||||| |||||    
T  21285741 atgtatatacaattatatatcattaacaacaatattagattatataattcaggcttactgaaacaacaacaacaagataaagcacttagtttcttacctc 21285840  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaa 149  Q
     ||||||||||  |||||| | |||||| ||||||||||||||||||||    
T  21285841 taagatcaactcacatcaactcgtgcgataaagatcgcatttaacctaa 21285889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 21673847 - 21674005
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatac-aatttaggcttactgaaacaataacagcaagataaataacttagtttctaacct 99  Q
    ||||||||||||||||||| ||||  |||||| ||||||| |||  |||| | |||||||||||||| |||| ||||||||  |||||||||| ||||||    
T  21673847 atgtatatacaattatataccattaacaacaacattagatcatattaattcaagcttactgaaacaacaacaacaagataac-aacttagtttttaacct 21673945  T
Q  100 ccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcatt 159  Q
    | || |||||||  ||| || ||||||||||||||||||||||| |||||||||||||||    
T  21673946 ctaatatcaactcacattaacttgtgcgacaaagatcgcatttatcctaaacaaggcatt 21674005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 62 - 159
Target Start/End: Complemental strand, 26355616 - 26355519
Alignment:
Q  62 aacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcatt 159  Q
    ||||||||||  |||||||| |||||||||||||||||| ||||||||||  |||||| ||||||||||||||||||||||||| |||||||||||||    
T  26355616 aacaataacaaaaagataaacaacttagtttctaacctctaagatcaactcacatcaacttgtgcgacaaagatcgcatttaacataaacaaggcatt 26355519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 23760822 - 23760661
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattataca-atttaggcttactgaaacaataacagcaaga---taaataacttagtttctaa 96  Q
    ||||||||||||||||||| ||||  |||||| ||||||| |||   ||| |||||||||||||||| |||| ||| |   |||| |||||||||| |||    
T  23760822 atgtatatacaattatataccattaacaacaacattagatcatatttattcaggcttactgaaacaacaacaacaacaaggtaaacaacttagtttttaa 23760723  T
Q  97 cctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcatt 159  Q
    |||| ||||||||||  |||||| ||||||||||||||||||||||| ||| |||||||||||    
T  23760722 cctctaagatcaactcacatcaacttgtgcgacaaagatcgcatttatcct-aacaaggcatt 23760661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 54 - 159
Target Start/End: Complemental strand, 5866201 - 5866097
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| |||| |||||||||| |||| |||||||||||||||||| ||||||||||  |||||| | |  |||||||||||||||| |||||||| ||    
T  5866201 cttactggaacattaacagcaaggtaaacaacttagtttctaacctctaagatcaactcacatcaactcgaacgacaaagatcgcattcaacctaaa-aa 5866103  T
Q  154 ggcatt 159  Q
    ||||||    
T  5866102 ggcatt 5866097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 54 - 150
Target Start/End: Original strand, 17141110 - 17141206
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaa 150  Q
    ||||||| |||| |||||||||| |||| |||||||||||||||||| ||||||||||  |||||| | |   ||||||||||||||| ||||||||    
T  17141110 cttactggaacattaacagcaaggtaaacaacttagtttctaacctctaagatcaactcacatcaactcgaatgacaaagatcgcattcaacctaaa 17141206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 54 - 159
Target Start/End: Original strand, 21491189 - 21491293
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| |||| |||||||||| |||| |||||||||||||||||| ||||||||||  ||| || | |  | |||||||||||||| |||||||| ||    
T  21491189 cttactggaacattaacagcaaggtaaacaacttagtttctaacctctaagatcaactcacattaactcgaactacaaagatcgcattcaacctaaa-aa 21491287  T
Q  154 ggcatt 159  Q
    ||||||    
T  21491288 ggcatt 21491293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 983382 - 983248
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaa---gataaataacttagtttctaac 97  Q
    |||||||||||  |||||||||||  |||||| |||  || ||| |||| || ||||||||||||| |||| |||   |||||| |||||||||||  ||    
T  983382 atgtatatacagctatataacattatcaacaacattcaatcatataattcagacttactgaaacaacaacaacaacatgataaacaacttagtttcctac 983283  T
Q  98 ctccaagatcaactagcatcaaattgtgcgacaaa 132  Q
    ||||||||||||||   ||||| | ||||||||||    
T  983282 ctccaagatcaactcatatcaactcgtgcgacaaa 983248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 5 - 149
Target Start/End: Complemental strand, 17266965 - 17266821
Alignment:
Q  5 atatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctccaag 104  Q
    ||||||| |||||| |||||   ||||| || | || ||| |||| ||||| |||||||||| ||||| |||||||  |||||||||||| ||| ||  |    
T  17266965 atatacatttatatcacattattaacaacatcaaatcatataattcaggctcactgaaacaacaacagtaagataagcaacttagtttcttacccccgtg 17266866  T
Q  105 atcaactagcatcaaattgtgcgacaaagatcgcatttaacctaa 149  Q
    |||||||  |||||| | |||||| |||| || ||||||||||||    
T  17266865 atcaactcacatcaactcgtgcgataaaggtcacatttaacctaa 17266821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 20498707 - 20498839
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    |||||||||||||||||| |||||   ||||| || | || ||| |  | || ||||| ||||||  |||| ||||||||| |||||||||||| |||||    
T  20498707 atgtatatacaattatatcacattataaacaacatcaaatcatatacatcagtcttaccgaaacatcaacatcaagataaacaacttagtttcttacctc 20498806  T
Q  101 caagatcaactagcatcaaattgtgcgacaaag 133  Q
    |||||||||||  |||||| | ||| |||||||    
T  20498807 caagatcaactcacatcaactcgtgtgacaaag 20498839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 83 - 159
Target Start/End: Original strand, 21249607 - 21249682
Alignment:
Q  83 aacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcatt 159  Q
    ||||||||| |||||||| ||||| ||||  |||||| |||  ||||||||||||||||||||||||| ||||||||    
T  21249607 aacttagttcctaacctctaagataaactcacatcaacttgaacgacaaagatcgcatttaacctaaa-aaggcatt 21249682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 149
Target Start/End: Original strand, 22364851 - 22364954
Alignment:
Q  46 aatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaac 145  Q
    |||| |||||||||||||||| ||||| |||||||  |||||||||| | | | ||  ||||||||  |||||| | ||||||||||| || ||||||||    
T  22364851 aattcaggcttactgaaacaacaacagtaagataagcaacttagtttattatccccctgatcaactcacatcaactcgtgcgacaaaggtcacatttaac 22364950  T
Q  146 ctaa 149  Q
    ||||    
T  22364951 ctaa 22364954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 51 - 149
Target Start/End: Original strand, 37116543 - 37116641
Alignment:
Q  51 aggcttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaa 149  Q
    |||||||||||||||| ||||| |||||||  |||||||||||| ||| ||| ||||| ||  |||||| | || |||||||| || |||||| |||||    
T  37116543 aggcttactgaaacaacaacagtaagataagcaacttagtttcttacccccatgatcatctcacatcaactcgtacgacaaaggtcacatttatcctaa 37116641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 159
Target Start/End: Original strand, 21255445 - 21255520
Alignment:
Q  83 aacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcatt 159  Q
    ||||||||| |||||||| ||||| ||||  |||||| | |  ||||||||||||||||||||||||| ||||||||    
T  21255445 aacttagttcctaacctctaagataaactcacatcaactcgaacgacaaagatcgcatttaacctaaa-aaggcatt 21255520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 149
Target Start/End: Original strand, 24353210 - 24353316
Alignment:
Q  46 aatttaggcttactgaaacaataacagca---agataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcattt 142  Q
    |||| |||||||||||||||| |||| ||   ||||||  |||||||||||| | | ||| ||||||||  |||||| | ||||||||||| || |||||    
T  24353210 aattcaggcttactgaaacaacaacaacagtaagataagcaacttagtttcttatccccatgatcaactcacatcaactcgtgcgacaaaggtcacattt 24353309  T
Q  143 aacctaa 149  Q
    | |||||    
T  24353310 atcctaa 24353316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 101; Significance: 3e-50; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 13083 - 13250
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    |||||||||||||||||||||||| ||||||| |||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||| |||    
T  13083 atgtatatacaattatataacattagcaacaacattagattatccaattcaggcttactgaaacaacaacagcaagataaataacttagtttctaatctc 13182  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtgactgg 169  Q
    || ||||||||  |||||| | ||| |||||||||| |||||||||| ||||||||||| ||| |||||    
T  13183 catgatcaactcacatcaactcgtgtgacaaagatcacatttaacct-aacaaggcattctgtaactgg 13250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 46 - 149
Target Start/End: Complemental strand, 18169 - 18066
Alignment:
Q  46 aatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaac 145  Q
    |||| |||||||||||||||| |||||  ||||||  |||||||||||| ||| ||| ||||| ||  |||||| | ||||||||||| || ||||||||    
T  18169 aattcaggcttactgaaacaacaacagtgagataagcaacttagtttcttacccccatgatcatctcacatcaactcgtgcgacaaaggtcacatttaac 18070  T
Q  146 ctaa 149  Q
    ||||    
T  18069 ctaa 18066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 97; Significance: 7e-48; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 39706266 - 39706098
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    |||||||||||||||||||||||| ||||||| ||||||| ||| |||| ||||||||| |||||| |||||||||||||| |||||| || |||| |||    
T  39706266 atgtatatacaattatataacattagcaacaacattagatcatataattcaggcttactaaaacaacaacagcaagataaacaacttaattcctaatctc 39706167  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtgactgg 169  Q
    |||||||||||  |||||| | ||||||||||||||||||||||||||||||| ||||| ||| |||||    
T  39706166 caagatcaactcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgg 39706098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 15190459 - 15190627
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    ||||||||||||||||||||||||  || ||| |||||| ||||||||  |||||||||| ||  | |||| |||| ||||||||||||||||||||| |    
T  15190459 atgtatatacaattatataacattatcatcaacattagaatatacaatccaggcttactggaatgacaacatcaaggtaaataacttagtttctaacccc 15190558  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtgactgg 169  Q
    |||||||||||  |||||| | |||||||||||||||| |||||||||||||||||||| ||| |||||    
T  15190559 caagatcaactcacatcaactcgtgcgacaaagatcgcttttaacctaaacaaggcattctgtaactgg 15190627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 15099492 - 15099660
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    ||||||||||||||||||||||||  || ||| |||||| ||||||||  |||||||||| ||  | |||| |||| |||||||||||||||||||||||    
T  15099492 atgtatatacaattatataacattatcatcaacattagaatatacaatccaggcttactggaatgacaacatcaaggtaaataacttagtttctaacctc 15099591  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtgactgg 169  Q
    |||||||||||  |||||| |  ||||||||||||||| ||||||||||||||| |||| ||| |||||    
T  15099592 caagatcaactcacatcaactcatgcgacaaagatcgcttttaacctaaacaagacattctgtaactgg 15099660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 12288186 - 12288038
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    |||||||||||| |||||||||||  |||||| |||| || ||| |||| |||||||||||||||| |||||||||||||| |||||||||||  |||||    
T  12288186 atgtatatacaactatataacattaccaacaacattaaatcatataattcaggcttactgaaacaacaacagcaagataaacaacttagtttcctacctc 12288087  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaa 149  Q
    |||||||||||  |||||| || |||||||||  || |||| |||||||    
T  12288086 caagatcaactcacatcaacttatgcgacaaaagtcacattaaacctaa 12288038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 54 - 157
Target Start/End: Original strand, 12774194 - 12774297
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| ||||||||||  |||||| | ||||||||| |||||||||||||||||||||    
T  12774194 cttactggaacaacaacagcaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaggatcgcatttaacctaaacaa 12774293  T
Q  154 ggca 157  Q
    ||||    
T  12774294 ggca 12774297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 54 - 159
Target Start/End: Original strand, 8846569 - 8846674
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| ||||| |||  ||||||||| |||||||||||||| ||| ||| ||||||  |||||| | ||||||||||||||||||||||| |||||||    
T  8846569 cttactggaacaacaactacaagataaacaacttagtttctaatctctaagttcaactcacatcaactcgtgcgacaaagatcgcatttaacataaacaa 8846668  T
Q  154 ggcatt 159  Q
    | ||||    
T  8846669 gacatt 8846674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 46 - 149
Target Start/End: Complemental strand, 46640387 - 46640285
Alignment:
Q  46 aatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaac 145  Q
    |||| ||| |||||||||||||||||| |||||||  |||||||||||| ||| ||| ||||||||  |||||| | ||||||||||| || ||||||||    
T  46640387 aattcaggtttactgaaacaataacagtaagataagcaacttagtttcttacc-ccatgatcaactcacatcaactcgtgcgacaaaggtcacatttaac 46640289  T
Q  146 ctaa 149  Q
    ||||    
T  46640288 ctaa 46640285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 16596789 - 16596946
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    ||||||||||||||||||||||||   | ||| ||||  |||||    | || ||||||  |||| |||||||||| |||| ||||||||||||||||||    
T  16596789 atgtatatacaattatataacattataagcaacattaatttataagcatcagtcttacttgaacattaacagcaaggtaaacaacttagtttctaacctc 16596888  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcatt 159  Q
     ||||||||||  |||||| | |  ||||||||||| |||| |||||||| ||||||||    
T  16596889 taagatcaactcacatcaactcgaacgacaaagatcacattcaacctaaa-aaggcatt 16596946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 149
Target Start/End: Complemental strand, 53082124 - 53081979
Alignment:
Q  5 atatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttc-taacctccaa 103  Q
    ||||||| |||||| |||||   ||||| || | || ||| |||| |||||||||||||||| ||||| |||||||  ||||||||||| || || ||||    
T  53082124 atatacatttatatcacattattaacaacatcaaatcatataattcaggcttactgaaacaacaacagtaagataagcaacttagtttcttaccccccaa 53082025  T
Q  104 gatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaa 149  Q
    ||||||||  |||||| | ||||||||||  || ||||||||||||    
T  53082024 gatcaactcacatcaactcgtgcgacaaatgtcacatttaacctaa 53081979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 117 - 159
Target Start/End: Complemental strand, 22634075 - 22634033
Alignment:
Q  117 caaattgtgcgacaaagatcgcatttaacctaaacaaggcatt 159  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  22634075 caaatcgtgcgacaaagatcgcatttaacctaaacaaggcatt 22634033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 123 - 159
Target Start/End: Original strand, 24029006 - 24029042
Alignment:
Q  123 gtgcgacaaagatcgcatttaacctaaacaaggcatt 159  Q
    |||||||||||||||||||||||||||||||||||||    
T  24029006 gtgcgacaaagatcgcatttaacctaaacaaggcatt 24029042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 159
Target Start/End: Original strand, 3332151 - 3332186
Alignment:
Q  124 tgcgacaaagatcgcatttaacctaaacaaggcatt 159  Q
    ||||||||||||||||||||||||||||||||||||    
T  3332151 tgcgacaaagatcgcatttaacctaaacaaggcatt 3332186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 150
Target Start/End: Original strand, 15552039 - 15552106
Alignment:
Q  83 aacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaa 150  Q
    |||||||||||||||||| ||||||||||  |||||| | |  ||||||||||||||||| |||||||    
T  15552039 aacttagtttctaacctctaagatcaactcacatcaactcgaacgacaaagatcgcattttacctaaa 15552106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 123 - 157
Target Start/End: Complemental strand, 20157146 - 20157112
Alignment:
Q  123 gtgcgacaaagatcgcatttaacctaaacaaggca 157  Q
    |||||||||||||||||||||||||||||||||||    
T  20157146 gtgcgacaaagatcgcatttaacctaaacaaggca 20157112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 13827 - 13695
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    |||||||||||||||||| |||||   ||||| || | || ||| |  | || ||||||| ||||  ||||  |||||||| |||||||||||| |||||    
T  13827 atgtatatacaattatatcacattataaacaacatcaaatcataaacatcagtcttactggaacatcaacataaagataaacaacttagtttcttacctc 13728  T
Q  101 caagatcaactagcatcaaattgtgcgacaaag 133  Q
     ||||||||||  |||||| | |||||||||||    
T  13727 taagatcaactcacatcaactcgtgcgacaaag 13695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 159
Target Start/End: Original strand, 32851642 - 32851676
Alignment:
Q  125 gcgacaaagatcgcatttaacctaaacaaggcatt 159  Q
    ||||||||||||||||||||||||||| |||||||    
T  32851642 gcgacaaagatcgcatttaacctaaaccaggcatt 32851676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 159
Target Start/End: Complemental strand, 13812665 - 13812629
Alignment:
Q  123 gtgcgacaaagatcgcatttaacctaaacaaggcatt 159  Q
    |||||||||||||| |||||||||||||||| |||||    
T  13812665 gtgcgacaaagatcacatttaacctaaacaaagcatt 13812629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 96; Significance: 3e-47; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 22921847 - 22921688
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatac-aatttaggcttactgaaacaataacagcaagataaataacttagtttctaacct 99  Q
    ||||||||||||||||||||||||  |||||| ||||||| |||  |||| |||||||||||||||| |||||||||||||| |||||||||||||||||    
T  22921847 atgtatatacaattatataacattaacaacaacattagatcatattaattcaggcttactgaaacaacaacagcaagataaacaacttagtttctaacct 22921748  T
Q  100 ccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcatt 159  Q
    | ||||||||||  |||||| | |||||||||||||||||||||||| ||||||||||||    
T  22921747 ctaagatcaactcacatcaactcgtgcgacaaagatcgcatttaacccaaacaaggcatt 22921688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 49261483 - 49261651
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    ||||||||||||||||||||||||  || ||| |||||| |||||||||  ||||||||| ||  | |||| |||| |||||||||||||||||||||||    
T  49261483 atgtatatacaattatataacattatcatcaacattagaatatacaattccggcttactggaaggacaacatcaaggtaaataacttagtttctaacctc 49261582  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtgactgg 169  Q
    |||||||||||  |||||| | |||||||||||||||| |||||||||||||||||||| ||| |||||    
T  49261583 caagatcaactcacatcaactcgtgcgacaaagatcgcttttaacctaaacaaggcattctgtaactgg 49261651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 87; E-Value: 6e-42
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 35981665 - 35981507
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    |||||||| |||||||||||||||  || ||| |||||| ||||||||  |||||||||| ||  | |||| ||||||||||||||||||||||||||||    
T  35981665 atgtatatgcaattatataacattatcatcaacattagaatatacaatccaggcttactggaatgacaacatcaagataaataacttagtttctaacctc 35981566  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcatt 159  Q
    |||||||||||  |||||| | |||||||||||||||| ||||||||||||||||||||    
T  35981565 caagatcaactcacatcaattcgtgcgacaaagatcgcttttaacctaaacaaggcatt 35981507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 20636992 - 20637159
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    ||||||||||||||||||||||||  || ||| |||| |  |||||||| |||||||||| ||  | |||| |||| |||||||||||||||||||||||    
T  20636992 atgtatatacaattatataacattatcatcaacattaaaaaatacaattcaggcttactggaatgacaacatcaaggtaaataacttagtttctaacctc 20637091  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtgactg 168  Q
    |||||||||||  |||||| |  ||||||||||||||| ||||||||||||||| |||| ||| ||||    
T  20637092 caagatcaactcacatcaactcatgcgacaaagatcgcttttaacctaaacaagacattctgtaactg 20637159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 54 - 169
Target Start/End: Complemental strand, 52927906 - 52927792
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| ||||| || ||||||||||| |||||||||||||||||| ||||||||||  |||||| | ||||||||||||||||||||||||| |||||    
T  52927906 cttactggaacaacaatagcaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaagatcgcatttaacct-aacaa 52927808  T
Q  154 ggcattatgtgactgg 169  Q
    |||||| ||| |||||    
T  52927807 ggcattctgtaactgg 52927792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 70 - 159
Target Start/End: Original strand, 22237841 - 22237930
Alignment:
Q  70 cagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcatt 159  Q
    |||||||||||| |||||||||||||||||| ||||||||||  |||||| | |||||| ||||||||||||||||||||||||||||||    
T  22237841 cagcaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgaaaaagatcgcatttaacctaaacaaggcatt 22237930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 21861546 - 21861389
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    |||||||||||||||||| |||||   ||||| || | || |||  ||| |||||||||||||||| || ||||||||||| |||||||||||| |||||    
T  21861546 atgtatatacaattatatcacattataaacaacatcatatcataatattcaggcttactgaaacaacaatagcaagataaacaacttagtttcttacctc 21861447  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcatt 159  Q
     ||||||||||  |||||| | ||||||||||  || |||||||||| |||||||||||    
T  21861446 taagatcaactcacatcaactcgtgcgacaaatgtcacatttaacct-aacaaggcatt 21861389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 54 - 159
Target Start/End: Original strand, 12271744 - 12271848
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||||||||||||||||| |||||| |||||||||||| ||||| ||||||||||  |||||| | ||||||||||| || |||||||||| |||||    
T  12271744 cttactgaaacaataacagcaggataaacaacttagtttcttacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacct-aacaa 12271842  T
Q  154 ggcatt 159  Q
    ||||||    
T  12271843 ggcatt 12271848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 63 - 159
Target Start/End: Original strand, 20248481 - 20248577
Alignment:
Q  63 acaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcatt 159  Q
    |||| |||| |||||||||||||||||||||||||||| |||||||| |  |||||| |||||||||||  ||||||||||||||||| ||||||||    
T  20248481 acaacaacatcaagataaataacttagtttctaacctctaagatcaatttacatcaacttgtgcgacaagaatcgcatttaacctaaataaggcatt 20248577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 54 - 149
Target Start/End: Original strand, 21754232 - 21754327
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaa 149  Q
    ||||||| |||||| ||||||||||||| ||||||||||||||||||  |||||||||  |||||| | ||||||||| |||| ||||||||||||    
T  21754232 cttactggaacaatgacagcaagataaacaacttagtttctaacctctgagatcaactcacatcaactcgtgcgacaaggatcacatttaacctaa 21754327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 62 - 157
Target Start/End: Original strand, 33681212 - 33681307
Alignment:
Q  62 aacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggca 157  Q
    ||||| |||| ||||||||| |||||||||||||||||| ||||||||||  |||||| | ||| ||||||||||||||||||| ||| |||||||    
T  33681212 aacaacaacaacaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgtgacaaagatcgcatttaacataagcaaggca 33681307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 21896232 - 21896078
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    |||||||||||||||||| |||||   ||||| || | || |||  ||| |||||||||||||||| ||||   ||||||| |||||||||||| || ||    
T  21896232 atgtatatacaattatatcacattataaacaacatcaaatcataatattcaggcttactgaaacaacaaca---agataaacaacttagtttcttacatc 21896136  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcatt 159  Q
     ||||||||||  |||||| | ||||||||||| || |||||||||| |||||||||||    
T  21896135 taagatcaactcacatcaactcgtgcgacaaaggtcacatttaacct-aacaaggcatt 21896078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 149
Target Start/End: Complemental strand, 16368259 - 16368115
Alignment:
Q  5 atatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctccaag 104  Q
    ||||||| |||||| |||||   ||||| || | || ||| |||| |||||||||||||||| ||||| |||||||| |||||| ||||| ||| | | |    
T  16368259 atatacatttatatcacattattaacaacatcaaatcatataattcaggcttactgaaacaacaacagtaagataaacaacttaatttcttacccctatg 16368160  T
Q  105 atcaactagcatcaaattgtgcgacaaagatcgcatttaacctaa 149  Q
    |||||||  |||||| | ||||||||||| || ||||||||||||    
T  16368159 atcaactcacatcaactcgtgcgacaaaggtcacatttaacctaa 16368115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 54 - 159
Target Start/End: Original strand, 20918798 - 20918902
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| |||| ||||| |||| ||||  ||||||||||||||||| ||||||||||  |||||| | |  |||||||||||||||| |||||||| ||    
T  20918798 cttactggaacattaacaacaaggtaaacgacttagtttctaacctctaagatcaactcacatcaagtcgaacgacaaagatcgcattcaacctaaa-aa 20918896  T
Q  154 ggcatt 159  Q
    ||||||    
T  20918897 ggcatt 20918902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 149
Target Start/End: Original strand, 50686761 - 50686905
Alignment:
Q  5 atatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctccaag 104  Q
    ||||||| |||||| |||||   ||||| ||  ||| ||| |||| |||||||||||||||| ||||| |||||||  |||||||||||| ||| ||| |    
T  50686761 atatacatttatatcacattattaacaacatcggatcatataattcaggcttactgaaacaacaacagtaagataagcaacttagtttcttacccccatg 50686860  T
Q  105 atcaactagcatcaaattgtgcgacaaagatcgcatttaacctaa 149  Q
    |||||||  | |||| | ||||||||||| || |||||| |||||    
T  50686861 atcaactcacgtcaactcgtgcgacaaaggtcacatttatcctaa 50686905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 159
Target Start/End: Complemental strand, 28194305 - 28194269
Alignment:
Q  123 gtgcgacaaagatcgcatttaacctaaacaaggcatt 159  Q
    |||||||||||||||||| ||||||||||||| ||||    
T  28194305 gtgcgacaaagatcgcatgtaacctaaacaagacatt 28194269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 94; Significance: 4e-46; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 23019550 - 23019703
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    ||||||||||||||||||||||||  |||| | ||||||||||| | || |||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  23019550 atgtatatacaattatataacattaacaacgacattagattatatagttcaggcttactgaaacaacaacagcaagataaacaacttagtttctaacctc 23019649  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaag 154  Q
    |||||||||||  |||||| | || |||||||||||||||||||||||| ||||    
T  23019650 caagatcaactcacatcaactcgttcgacaaagatcgcatttaacctaaccaag 23019703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 54 - 163
Target Start/End: Original strand, 1561498 - 1561607
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| || | ||||||||||||||| |||||||||||||||||| | ||||||||  |||||| | |||||||||||||||||||||||||||||||    
T  1561498 cttactggaatattaacagcaagataaacaacttagtttctaacctctaggatcaactcacatcaactcgtgcgacaaagatcgcatttaacctaaacaa 1561597  T
Q  154 ggcattatgt 163  Q
    ||||||||||    
T  1561598 ggcattatgt 1561607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 54 - 155
Target Start/End: Original strand, 19652390 - 19652491
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||| ||||||||||  |||||| | ||||||||||||||||||||| |||||||||    
T  19652390 cttactggaacaataacagcaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaagatcgcatttatcctaaacaa 19652489  T
Q  154 gg 155  Q
    ||    
T  19652490 gg 19652491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 22080717 - 22080562
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattata-caatttaggcttactgaaacaataacagcaagataaataacttagtttctaacct 99  Q
    ||||||||||| ||||||||||||  |||||  ||||| | ||| |||||||||||||||||||||| || ||||||||||  |||||||||||||||||    
T  22080717 atgtatatacatttatataacattaacaacatcattaggtcatatcaatttaggcttactgaaacaacaagagcaagataagcaacttagtttctaacct 22080618  T
Q  100 ccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaagg 155  Q
    | ||||||||||  |||||| | ||||||||| |||||||||   |||||||||||    
T  22080617 ctaagatcaactcacatcaactcgtgcgacaaggatcgcattattcctaaacaagg 22080562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 19668516 - 19668664
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    |||||||||||| |||||||||||  |||||| | || || ||| |  | || ||||||||||||| |||||||||||||| |||||||||||| |||||    
T  19668516 atgtatatacaactatataacattatcaacaacactacatcatatacatcagacttactgaaacaacaacagcaagataaacaacttagtttcttacctc 19668615  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaa 149  Q
    |||||||||||  |||||| | ||||||||||| || ||||||||||||    
T  19668616 caagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaa 19668664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 27 - 149
Target Start/End: Complemental strand, 27333236 - 27333114
Alignment:
Q  27 caacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgc 126  Q
    |||||| ||| |||||||||||| |||||||||||||||  |||| ||||||||| || ||||||||||||||| ||||||||||  |||||| | ||||    
T  27333236 caacaacattggattatacaattcaggcttactgaaacagcaacatcaagataaacaatttagtttctaacctctaagatcaactcacatcaactcgtgc 27333137  T
Q  127 gacaaagatcgcatttaacctaa 149  Q
    ||||| |||| ||||||||||||    
T  27333136 gacaaggatcacatttaacctaa 27333114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 27 - 149
Target Start/End: Complemental strand, 27393976 - 27393854
Alignment:
Q  27 caacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgc 126  Q
    |||||| ||| |||||||||||| |||||||||||||||  |||| ||||||||| || ||||||||||||||| ||||||||||  |||||| | ||||    
T  27393976 caacaacattggattatacaattcaggcttactgaaacagcaacatcaagataaacaatttagtttctaacctctaagatcaactcacatcaactcgtgc 27393877  T
Q  127 gacaaagatcgcatttaacctaa 149  Q
    ||||| |||| ||||||||||||    
T  27393876 gacaaggatcacatttaacctaa 27393854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 54 - 159
Target Start/End: Complemental strand, 28496398 - 28496294
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| |||| |||||||||| |||| |||||||||||||| ||| ||||||||||  |||||| | ||||||||||||||||| |||||||||||||    
T  28496398 cttactggaacattaacagcaaggtaaacaacttagtttctaaactctaagatcaactcacatcaactcgtgcgacaaagatcgca-ttaacctaaacaa 28496300  T
Q  154 ggcatt 159  Q
    ||||||    
T  28496299 ggcatt 28496294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 54 - 159
Target Start/End: Complemental strand, 29808809 - 29808705
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| |||| |||||||||| |||| |||||||||||||| ||| ||||||||||  |||||| | ||||||||||||||||| |||||||||||||    
T  29808809 cttactggaacattaacagcaaggtaaacaacttagtttctaaactctaagatcaactcacatcaactcgtgcgacaaagatcgca-ttaacctaaacaa 29808711  T
Q  154 ggcatt 159  Q
    ||||||    
T  29808710 ggcatt 29808705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 46 - 133
Target Start/End: Complemental strand, 9098457 - 9098370
Alignment:
Q  46 aatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaag 133  Q
    |||| |||||||||||||||||||| |||||||||| || ||||||||| ||||| ||||||||||  |||||| | |||||||||||    
T  9098457 aattcaggcttactgaaacaataactgcaagataaacaaattagtttcttacctctaagatcaactcacatcaactcgtgcgacaaag 9098370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 51 - 149
Target Start/End: Original strand, 35008344 - 35008442
Alignment:
Q  51 aggcttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaa 149  Q
    |||||||||||||||||||||| |||||||  |||||||||||| ||| ||| ||||||||  |||||| | |||| |||||| || |||||| |||||    
T  35008344 aggcttactgaaacaataacagtaagataagcaacttagtttcttacccccatgatcaactcacatcaactcgtgcaacaaaggtcacatttatcctaa 35008442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 133
Target Start/End: Original strand, 20109354 - 20109417
Alignment:
Q  70 cagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaag 133  Q
    |||||||||||| |||||||||||| ||||| ||||||||||  |||||| | |||||||||||    
T  20109354 cagcaagataaacaacttagtttcttacctctaagatcaactcacatcaactcgtgcgacaaag 20109417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 149
Target Start/End: Original strand, 23076926 - 23077024
Alignment:
Q  51 aggcttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaa 149  Q
    |||||||||||||||| ||||| |||||||  || ||||||||| ||| ||| ||||||||  |||||| |  ||| |||||| || |||||| |||||    
T  23076926 aggcttactgaaacaacaacagtaagataagcaaattagtttcttacccccatgatcaactcacatcaactcatgcaacaaaggtcacatttatcctaa 23077024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 12910 - 13068
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    ||||||||||||||||||||||||   ||||| ||||||| ||| |||| |||||||||| ||||| ||||||||||||||  |||||||||||||||||    
T  12910 atgtatatacaattatataacattaataacaacattagatcatataattcaggcttactggaacaacaacagcaagataaaccacttagtttctaacctc 13009  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcatt 159  Q
     ||||||||||  |||||| | ||||||||||||| |||||||||||||||||||||||    
T  13010 taagatcaactcacatcaactcgtgcgacaaagattgcatttaacctaaacaaggcatt 13068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 10671 - 10828
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    |||||||||||||||||| |||||  |||||| ||||||||||| |||| |||||||||||||||| |||||||||||||| |||||||||||| |||||    
T  10671 atgtatatacaattatatgacattaacaacaacattagattatataattcaggcttactgaaacaacaacagcaagataaacaacttagtttcttacctc 10770  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcatt 159  Q
     ||||||||||  |||||| | |||||||| |||||||||||||||| |||||||||||    
T  10771 taagatcaactcacatcaactcgtgcgacagagatcgcatttaacct-aacaaggcatt 10828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 89; Significance: 4e-43; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 32679 - 32846
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    |||||||||||| |||||||||||  ||| || ||||||||||| |||| ||||||||||||||||||||| ||||||||| |||||||||||| |||||    
T  32679 atgtatatacaactatataacattaacaaaaacattagattatataattcaggcttactgaaacaataacaacaagataaacaacttagtttcttacctc 32778  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtgactgg 169  Q
     ||||||||||  |||||| | ||||||||||||||||||||||||  ||||||||||| ||| |||||    
T  32779 taagatcaactcacatcaactcgtgcgacaaagatcgcatttaacc-caacaaggcattctgtaactgg 32846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 2623 - 2464
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatac-aatttaggcttactgaaacaataacagcaagataaataacttagtttctaacct 99  Q
    ||||||||||||||||||| ||||  |||||| ||||||| |||  |||| |||||||||||||||| | |||||||||||| |||||| ||||||||||    
T  2623 atgtatatacaattatataccattaacaacaacattagatcatattaattcaggcttactgaaacaacatcagcaagataaacaacttaatttctaacct 2524  T
Q  100 ccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcatt 159  Q
    | ||||||||||  |||||| ||||||||||||||||||||||| |||||||||||||||    
T  2523 ctaagatcaactcacatcaacttgtgcgacaaagatcgcatttatcctaaacaaggcatt 2464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 88; Significance: 2e-42; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 28406120 - 28406283
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatac-aatttaggcttactgaaacaataacagcaagataaataacttagtttctaacct 99  Q
    ||||||||||||||||||| ||||  |||||| | ||||| |||  || ||||||||||| |||||| |||||||||||||| |||||||||||||||||    
T  28406120 atgtatatacaattatataccattaacaacaacaatagatcatattaaattaggcttactaaaacaacaacagcaagataaacaacttagtttctaacct 28406219  T
Q  100 ccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgt 163  Q
    | ||||||||||  |||||| | ||||||||| |||||||||||||||||||||||||||||||    
T  28406220 ctaagatcaactcacatcaactcgtgcgacaaggatcgcatttaacctaaacaaggcattatgt 28406283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 3 - 136
Target Start/End: Original strand, 25175995 - 25176129
Alignment:
Q  3 gtatatacaattatataacattcgcaacaatattagattatac-aatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctcc 101  Q
    ||||||| ||||||||||||||  |||||| ||||||| |||  |||| |||||||||||||||| |||||||||||||| ||||||||||||||||||     
T  25175995 gtatatataattatataacattaacaacaacattagatcatattaattcaggcttactgaaacaacaacagcaagataaacaacttagtttctaacctct 25176094  T
Q  102 aagatcaactagcatcaaattgtgcgacaaagatc 136  Q
    ||||||||||  |||||| | ||||||||||||||    
T  25176095 aagatcaacttacatcaattcgtgcgacaaagatc 25176129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 54 - 157
Target Start/End: Complemental strand, 22134141 - 22134038
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| || ||| ||||||||||||| |||||||||||||||||| ||||||||||  |||||| | |||||||||||||||||||||||||||||||    
T  22134141 cttactggaaaaatgacagcaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaagatcgcatttaacctaaacaa 22134042  T
Q  154 ggca 157  Q
    ||||    
T  22134041 ggca 22134038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 7709 - 7556
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    |||||||||||||||||| |||||  |||||| |||| || ||| |||| |||||||||||||||| |||| || |||||| |||||||||||  |||||    
T  7709 atgtatatacaattatatcacattaacaacaacattaaatcatataattcaggcttactgaaacaacaacaacatgataaacaacttagtttcctacctc 7610  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaag 154  Q
    |||||||||||  |||||| | ||||||||||| || |||| ||||||| ||||    
T  7609 caagatcaactcacatcaactcgtgcgacaaaggtcacattaaacctaaccaag 7556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 18786879 - 18786748
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    |||||||||||| |||||||||||  ||| || |||  || ||| ||||||||||||||||||||| ||||||| |||||| |||||||||||  |||||    
T  18786879 atgtatatacaactatataacattatcaataacattcaatcatataatttaggcttactgaaacaacaacagcatgataaacaacttagtttcctacctc 18786780  T
Q  101 caagatcaactagcatcaaattgtgcgacaaa 132  Q
    |||||||||||  |||||| | ||||||||||    
T  18786779 caagatcaactcacatcaactcgtgcgacaaa 18786748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 5 - 149
Target Start/End: Original strand, 23791423 - 23791567
Alignment:
Q  5 atatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctccaag 104  Q
    ||||||| |||||| |||||   ||||| || | || ||| |||| |||||||||||||||| |||| ||||||||| ||||||||||| |||| |||||    
T  23791423 atatacatttatatcacattattaacaacatcaaatcatataattcaggcttactgaaacaacaacaacaagataaacaacttagtttccaacccccaag 23791522  T
Q  105 atcaactagcatcaaattgtgcgacaaagatcgcatttaacctaa 149  Q
    |||||||  |||||| | ||||||||||| || ||||||||||||    
T  23791523 atcaactcacatcaactcgtgcgacaaaggtcacatttaacctaa 23791567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 54 - 159
Target Start/End: Complemental strand, 22459485 - 22459381
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||| ||| ||||||  |||||| | ||  ||||||| || |||||||||| |||||    
T  22459485 cttactgaaacaataacagcaagataaacaacttagtttcttacctctaaggtcaactcacatcaactcgtaggacaaaggtcacatttaacct-aacaa 22459387  T
Q  154 ggcatt 159  Q
    ||||||    
T  22459386 ggcatt 22459381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 149
Target Start/End: Original strand, 23207426 - 23207570
Alignment:
Q  5 atatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctccaag 104  Q
    ||||||| |||||| |||||   ||||| || | || ||| |||| |||||||||  ||||| ||||| |||||||  |||||||||||| ||| |||||    
T  23207426 atatacatttatatcacattattaacaacatcaaatcatataattcaggcttacttgaacaacaacagtaagataagcaacttagtttcttacccccaag 23207525  T
Q  105 atcaactagcatcaaattgtgcgacaaagatcgcatttaacctaa 149  Q
    |||||||  |||||| | ||||||||||| || ||||||||||||    
T  23207526 atcaactcacatcaactcgtgcgacaaaggtcacatttaacctaa 23207570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 46 - 149
Target Start/End: Original strand, 25109078 - 25109181
Alignment:
Q  46 aatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaac 145  Q
    |||| |||||||||||||||| ||||| |||||||  |||||||||||| | | ||| ||||||||  |||||| | ||||||||||| || ||||||||    
T  25109078 aattcaggcttactgaaacaacaacagtaagataagcaacttagtttcttatccccatgatcaacttacatcaactcgtgcgacaaaggtcacatttaac 25109177  T
Q  146 ctaa 149  Q
    ||||    
T  25109178 ctaa 25109181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 87; Significance: 6e-42; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 87; E-Value: 6e-42
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 6755 - 6913
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    ||||||||||||||||||||||||  |||||| ||||||| ||| |||| | ||||||| |||||| |||||||||||||| ||||||| |||||| |||    
T  6755 atgtatatacaattatataacattaacaacaacattagatcatataattcaagcttactaaaacaacaacagcaagataaacaacttagattctaatctc 6854  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcatt 159  Q
    |||| ||||||  |||||| | ||||||||||||||||||||||||||||||| |||||    
T  6855 caagttcaactcacatcaactcgtgcgacaaagatcgcatttaacctaaacaatgcatt 6913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 87; E-Value: 6e-42
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 14135 - 14293
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    ||||||||||||||||||||||||  |||||| ||||||| ||| |||| | ||||||| |||||| |||||||||||||| ||||||| |||||| |||    
T  14135 atgtatatacaattatataacattaacaacaacattagatcatataattcaagcttactaaaacaacaacagcaagataaacaacttagattctaatctc 14234  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcatt 159  Q
    |||| ||||||  |||||| | ||||||||||||||||||||||||||||||| |||||    
T  14235 caagttcaactcacatcaactcgtgcgacaaagatcgcatttaacctaaacaatgcatt 14293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1257 (Bit Score: 84; Significance: 4e-40; HSPs: 1)
Name: scaffold1257
Description:

Target: scaffold1257; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 2196 - 2037
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatac-aatttaggcttactgaaacaataacagcaagataaataacttagtttctaacct 99  Q
    ||||||||||||||||||| ||||  |||||| ||| ||| |||  || | |||||||||||||||| |||||||||||||| |||||| ||||||||||    
T  2196 atgtatatacaattatataccattaacaacaacattggatcatattaaatcaggcttactgaaacaacaacagcaagataaacaacttattttctaacct 2097  T
Q  100 ccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcatt 159  Q
    | ||||||||||  |||||| | |||||||||||||||||||||||||||||||||||||    
T  2096 ctaagatcaactcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcatt 2037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 84; Significance: 4e-40; HSPs: 2)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 6678 - 6836
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatac-aatttaggcttactgaaacaataacagcaagataaataacttagtttctaacct 99  Q
    ||||||||||||||||||| ||||  |||||| ||||||| |||  |||| |||||||||||||||| |||||||||||||  |||||||||| ||||||    
T  6678 atgtatatacaattatataccattaacaacaacattagatcatattaattcaggcttactgaaacaacaacagcaagataac-aacttagtttttaacct 6776  T
Q  100 ccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcatt 159  Q
    | ||||||||||  |||||| ||||||||||||||||||||||| |||||||||||||||    
T  6777 ctaagatcaactcacatcaacttgtgcgacaaagatcgcatttatcctaaacaaggcatt 6836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 54 - 159
Target Start/End: Original strand, 8666 - 8770
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| ||||| | |||||||||||| |||||||||||| ||||| |||||||| |  |||||| | ||||||||||| || |||||||||| |||||    
T  8666 cttactggaacaacatcagcaagataaacaacttagtttcttacctctaagatcaattcacatcaactcgtgcgacaaaggtcacatttaacct-aacaa 8764  T
Q  154 ggcatt 159  Q
    ||||||    
T  8765 ggcatt 8770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 84; Significance: 4e-40; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 100517 - 100676
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatac-aatttaggcttactgaaacaataacagcaagataaataacttagtttctaacct 99  Q
    ||||||||||||||||||||||||  |||||| ||||||| |||  ||||||||||||||||||||| |||| ||||||||| |||||||||||||||||    
T  100517 atgtatatacaattatataacattaacaacaacattagatcatattaatttaggcttactgaaacaacaacaacaagataaacaacttagtttctaacct 100616  T
Q  100 ccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcatt 159  Q
    | |||| ||| |  |||||| | ||||||||||||||||||||||| || ||||||||||    
T  100617 ctaagagcaagtcacatcaactcgtgcgacaaagatcgcatttaacttagacaaggcatt 100676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 40152 - 39993
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatac-aatttaggcttactgaaacaataacagcaagataaataacttagtttctaacct 99  Q
    ||||||||||||||||||| ||||  |||||| || |||| |||  |||| |||||||||||||||| |||| |||| |||| |||||||||||||||||    
T  40152 atgtatatacaattatataccattaacaacaacataagatcatattaattcaggcttactgaaacaacaacatcaaggtaaacaacttagtttctaacct 40053  T
Q  100 ccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcatt 159  Q
    | ||||||||||  |||||| | |||| ||||||||||||||||||||||| ||||||||    
T  40052 ctaagatcaactcacatcaactcgtgcaacaaagatcgcatttaacctaaataaggcatt 39993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 83 - 154
Target Start/End: Original strand, 101619 - 101690
Alignment:
Q  83 aacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaag 154  Q
    |||||||||||||||||| ||||||||||  |||||| | ||||||||| |||| |||||||||||||||||    
T  101619 aacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaggatcacatttaacctaaacaag 101690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 81; Significance: 2e-38; HSPs: 2)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 8159 - 8330
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    ||||||||||||||||||||||||  |||||| ||||||||||| |||| |||||||||||||||| ||||||| |||||| ||||||||| || |||||    
T  8159 atgtatatacaattatataacattaacaacaacattagattatataattcaggcttactgaaacaacaacagcaggataaacaacttagttccttacctc 8258  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtgactggacaa 173  Q
     ||||||||||  |||||| | ||| |||||||||| ||||  |||| ||||| ||||||||| |||||||||    
T  8259 taagatcaactcacatcaactcgtgagacaaagatcacattatacct-aacaaagcattatgtaactggacaa 8330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556; HSP #2
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 6953 - 7111
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    ||||||||||||||||||||||||   ||||| ||||  | |||    | || ||||||| ||||| |||||||||||||| ||||||||||||||||||    
T  6953 atgtatatacaattatataacattataaacaacattaattcatatgcatcagtcttactggaacaacaacagcaagataaacaacttagtttctaacctc 7052  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcatt 159  Q
     ||||||||||  |||||| |||||||||||  ||||||||||||||||||||||||||    
T  7053 taagatcaactcacatcaacttgtgcgacaagaatcgcatttaacctaaacaaggcatt 7111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 14675 - 14506
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatac-aatttaggcttactgaaacaataacagcaagataaataacttagtttctaacct 99  Q
    |||||||||| |||||||| ||||  ||| || ||||||| |||  || | |||||||||||||||| |||||||||||| | |||||||||||||||||    
T  14675 atgtatatactattatataccattaacaaaaacattagatcatattaaatcaggcttactgaaacaacaacagcaagatatacaacttagtttctaacct 14576  T
Q  100 ccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtgactgg 169  Q
    | ||||||||||  |||||| ||||||||| ||||||||||||| ||||||||||||||| ||| |||||    
T  14575 ctaagatcaactcacatcaacttgtgcgaccaagatcgcatttatcctaaacaaggcattctgtaactgg 14506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 76; Significance: 2e-35; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 62338 - 62496
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattata-caatttaggcttactgaaacaataacagcaagataaataacttagtttctaacct 99  Q
    ||||||||||||||||||||||||  |||||  ||||| | ||| ||||| |||||||||||||||| |||||||||||||| |||||||||||||||||    
T  62338 atgtatatacaattatataacattaacaacatcattagttcataacaattcaggcttactgaaacaacaacagcaagataaacaacttagtttctaacct 62437  T
Q  100 ccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcatt 159  Q
    | ||||||||||  |||| ||| | ||||||| ||||||| ||||| |||||||||||||    
T  62438 ctaagatcaactcacatcgaatcgggcgacaaggatcgca-ttaacataaacaaggcatt 62496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 54 - 163
Target Start/End: Original strand, 132848 - 132957
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| ||||| ||||| |||||||| |||||||||||||||||| ||||||||||  |||||| | |||||||||||||| ||||||||||||||||    
T  132848 cttactggaacaacaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaagatcacatttaacctaaacaa 132947  T
Q  154 ggcattatgt 163  Q
    ||||||||||    
T  132948 ggcattatgt 132957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 76; Significance: 2e-35; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 46 - 169
Target Start/End: Complemental strand, 15764 - 15641
Alignment:
Q  46 aatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaac 145  Q
    |||| |||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||  |||||| | |||||||||||||| ||||||||    
T  15764 aattcaggcttactgaaacaacaacagcaagataaacaacttagtttctaatctccaagatcaactcacatcaactcgtgcgacaaagatcacatttaac 15665  T
Q  146 ctaaacaaggcattatgtgactgg 169  Q
     ||||||||||||| ||| |||||    
T  15664 ataaacaaggcattctgtaactgg 15641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 75; Significance: 9e-35; HSPs: 2)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 8050 - 7886
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    |||||||||||| |||||||||||  |||||| |||| || ||| |||| ||||||||||||||||   |||||||||||| |||||||||||| |||||    
T  8050 atgtatatacaactatataacattatcaacaacattaaatcatataattcaggcttactgaaacaa---cagcaagataaacaacttagtttcttacctc 7954  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtgactgg 169  Q
     ||||||||||  |||||| | ||||||||||||||||||||| ||| ||||||||||| ||| |||||    
T  7953 taagatcaactcacatcaactcgtgcgacaaagatcgcatttaccct-aacaaggcattttgtaactgg 7886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 54 - 159
Target Start/End: Complemental strand, 29204 - 29100
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| |||| |||||||||| |||| |||||||||||||||||| ||||||||||  |||||| | |  |||||||||||||||| |||||||| ||    
T  29204 cttactggaacattaacagcaaggtaaacaacttagtttctaacctctaagatcaactcacatcaactcgaacgacaaagatcgcattcaacctaaa-aa 29106  T
Q  154 ggcatt 159  Q
    ||||||    
T  29105 ggcatt 29100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 54 - 159
Target Start/End: Complemental strand, 28735 - 28630
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| |||||| ||||||||||||| |||||||||||||||||| ||||||||||  |||||| | |||||||||||||||||||||||||||||||    
T  28735 cttactggaacaatgacagcaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaagatcgcatttaacctaaacaa 28636  T
Q  154 ggcatt 159  Q
    ||||||    
T  28635 ggcatt 28630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 19407 - 19576
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatac-aatttaggcttactgaaacaataacagcaagataaataacttagtttctaacct 99  Q
    ||||||||||||||||||| ||||  |||||| ||||||| |||  || | ||| |||||||||||| |||| ||||||||| |||||||||||||||||    
T  19407 atgtatatacaattatataccattaacaacaacattagatcatattaaatcagggttactgaaacaacaacatcaagataaacaacttagtttctaacct 19506  T
Q  100 ccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtgactgg 169  Q
    | ||||||||||  |||||| ||||||||||| ||||||||||||| ||| |||| |||| ||| |||||    
T  19507 ctaagatcaactcacatcaacttgtgcgacaaggatcgcatttaacataagcaagacattctgtaactgg 19576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 70; Significance: 9e-32; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 54 - 159
Target Start/End: Original strand, 130102 - 130207
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| ||||||||||  |||||| | ||||||||||||||||||||| |||||||||    
T  130102 cttactggaacaacaacagcaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaagatcgcatttatcctaaacaa 130201  T
Q  154 ggcatt 159  Q
    ||||||    
T  130202 ggcatt 130207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 68; Significance: 1e-30; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 5786 - 5944
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatac-aatttaggcttactgaaacaataacagcaagataaataacttagtttctaacct 99  Q
    ||||||||||||||||||| ||||  |||||| ||||||| |||  |||| |||||||||||||||| |||| ||||||||| |||||||||| ||||||    
T  5786 atgtatatacaattatataccattaacaacaacattagatcatattaattcaggcttactgaaacaacaacaacaagataaa-aacttagtttttaacct 5884  T
Q  100 ccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcatt 159  Q
    | ||||||||||  |||||| |||||||||||  ||| |||||| |||||| ||||||||    
T  5885 ctaagatcaactcacatcaacttgtgcgacaagaatcacatttagcctaaataaggcatt 5944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 66; Significance: 2e-29; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 136345 - 136196
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagatt-atacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacct 99  Q
    |||||||||||| |||||||||||  |||||| |||| | | ||| |||| |||||||||||||||| |||||||||||||| |||||||||||  ||||    
T  136345 atgtatatacaactatataacattaacaacaacattaaaatcatataattcaggcttactgaaacaacaacagcaagataaacaacttagtttcctacct 136246  T
Q  100 ccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaa 149  Q
    ||||||||||||  |||||| | || |||||||| || ||||||||||||    
T  136245 ccaagatcaactcacatcaactcgtacgacaaaggtcacatttaacctaa 136196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 145053 - 144904
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagatt-atacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacct 99  Q
    |||||||||||| |||||||||||  |||||| |||| | | ||| |||| |||||||||||||||| |||||||||||||| |||||||||||  ||||    
T  145053 atgtatatacaactatataacattaacaacaacattaaaatcatataattcaggcttactgaaacaacaacagcaagataaacaacttagtttcctacct 144954  T
Q  100 ccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaa 149  Q
    ||||||||||||  |||||| | || |||||||| || ||||||||||||    
T  144953 ccaagatcaactcacatcaactcgtacgacaaaggtcacatttaacctaa 144904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 65; Significance: 9e-29; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 51 - 159
Target Start/End: Complemental strand, 2731 - 2623
Alignment:
Q  51 aggcttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaa 150  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||  |||||| | ||||||||| |||| |||||  ||||||    
T  2731 aggcttactgaaacaacaacagcaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaggatcacatttttcctaaa 2632  T
Q  151 caaggcatt 159  Q
    |||||||||    
T  2631 caaggcatt 2623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 65; Significance: 9e-29; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 103615 - 103467
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    |||||||||||| || ||||||||  |||||| |||| || ||| |||| |||||||||||||||| ||||| |||||||| |||||||||||  |||||    
T  103615 atgtatatacaactacataacattaacaacaacattaaatcatataattcaggcttactgaaacaacaacaggaagataaagaacttagtttcctacctc 103516  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaa 149  Q
    |||||||||||  |||||| | || |||||||| || ||||||||||||    
T  103515 caagatcaactcacatcaactcgtacgacaaaggtcacatttaacctaa 103467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 62; Significance: 5e-27; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 54 - 159
Target Start/End: Complemental strand, 45716 - 45611
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| |||||| ||||||| ||||| |||||||||||||||||| ||||||||||  |||||| | ||||||||||||||||||||| |||||||||    
T  45716 cttactggaacaattacagcaatataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaagatcgcatttatcctaaacaa 45617  T
Q  154 ggcatt 159  Q
    | ||||    
T  45616 gacatt 45611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 60; Significance: 8e-26; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 54 - 173
Target Start/End: Complemental strand, 10465 - 10347
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| ||||| |||| ||||||||| |||||||||||||||||| ||||||||||  |||||| | |||| |||||||||||||||||||| |||||    
T  10465 cttactggaacaacaacaacaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcaacaaagatcgcatttaacct-aacaa 10367  T
Q  154 ggcattatgtgactggacaa 173  Q
    |||| ||||| || ||||||    
T  10366 ggcagtatgtaacaggacaa 10347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1765 (Bit Score: 59; Significance: 3e-25; HSPs: 1)
Name: scaffold1765
Description:

Target: scaffold1765; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 1226 - 1383
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    |||||||||||| |||||||||||  |||||| || | || ||| |  | || ||||||| ||||| |||| ||||||||| |||||||||||| |||||    
T  1226 atgtatatacaactatataacattaacaacaacatcaaatcatatacatcagtcttactggaacaacaacaacaagataaaaaacttagtttcttacctc 1325  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcatt 159  Q
     ||||||||||  |||||| | ||| ||||||||||||||||||||| |||||||||||    
T  1326 taagatcaactcacatcaactcgtgtgacaaagatcgcatttaacct-aacaaggcatt 1383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 57; Significance: 5e-24; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 12712 - 12860
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    |||||||||||||||||| |||||   ||||| || | || |||||  |||| ||||||||||||| |||||||||||||| |||||||||| | |||||    
T  12712 atgtatatacaattatatcacattataaacaacatcaaataatacacattagacttactgaaacaacaacagcaagataaacaacttagtttattacctc 12811  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaa 149  Q
     ||||||||||  |||| | | ||||||||||| || ||||||||||||    
T  12812 taagatcaactcacatccactcgtgcgacaaaggtcacatttaacctaa 12860  T

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Target: scaffold0150 (Bit Score: 55; Significance: 8e-23; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 54 - 163
Target Start/End: Original strand, 32288 - 32387
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| ||||| ||||| |||||||| |||||||||||||||||| ||||||||||||          ||||||||||||||||||||||||||||||    
T  32288 cttactggaacaacaacagtaagataaacaacttagtttctaacctctaagatcaactag----------tgcgacaaagatcgcatttaacctaaacaa 32377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 54 - 159
Target Start/End: Original strand, 160880 - 160985
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||| ||||||| |||| ||||||||| |||||||||||||||||| ||||||||||  |||||| | |||||||||||||| |||||| ||||| |||    
T  160880 cttaccgaaacaacaacaacaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaagatcacatttatcctaaccaa 160979  T
Q  154 ggcatt 159  Q
    | ||||    
T  160980 gacatt 160985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1351 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold1351
Description:

Target: scaffold1351; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 5 - 149
Target Start/End: Original strand, 154 - 298
Alignment:
Q  5 atatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctccaag 104  Q
    ||||||| ||||||||||||   ||||| || | || ||  ||||||||||||||||||||| ||||| ||||||   |||||||||||| ||| ||| |    
T  154 atatacatttatataacattattaacaacatcaaatcatttaatttaggcttactgaaacaacaacagtaagatatgcaacttagtttcttacccccatg 253  T
Q  105 atcaactagcatcaaattgtgcgacaaagatcgcatttaacctaa 149  Q
    |||||||  |||||| ||||||||||||| || ||||||||||||    
T  254 atcaactcacatcaacttgtgcgacaaaggtcacatttaacctaa 298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1137 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold1137
Description:

Target: scaffold1137; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 74 - 159
Target Start/End: Complemental strand, 2207 - 2122
Alignment:
Q  74 aagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcatt 159  Q
    |||||||| |||||||||||||||||| ||||| ||||  |||| | | ||||||||| |||||||||||||||||||||||||||    
T  2207 aagataaacaacttagtttctaacctctaagattaactcacatccactcgtgcgacaaggatcgcatttaacctaaacaaggcatt 2122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 54 - 143
Target Start/End: Complemental strand, 22598 - 22509
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcattta 143  Q
    ||||||| ||||  |||| ||||| ||| |||||||||||||||||| ||||||||||  |||||| | |||||||||||||||||||||    
T  22598 cttactggaacagcaacatcaagacaaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaagatcgcattta 22509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 159
Target Start/End: Complemental strand, 80188 - 80152
Alignment:
Q  123 gtgcgacaaagatcgcatttaacctaaacaaggcatt 159  Q
    ||||||| |||||||||||||||||||||||||||||    
T  80188 gtgcgacgaagatcgcatttaacctaaacaaggcatt 80152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1984 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold1984
Description:

Target: scaffold1984; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 62 - 169
Target Start/End: Original strand, 334 - 440
Alignment:
Q  62 aacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattat 161  Q
    ||||| |||||||||||||  |||| ||||||||||||| ||||||||||  |||||| | || |||||||||||||||||||| ||| |||| |||| |    
T  334 aacaacaacagcaagataac-aactcagtttctaacctctaagatcaactcacatcaactcgtacgacaaagatcgcatttaacataagcaagacattct 432  T
Q  162 gtgactgg 169  Q
    || |||||    
T  433 gtaactgg 440  T

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Target: scaffold0507 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 57 - 148
Target Start/End: Complemental strand, 7979 - 7888
Alignment:
Q  57 actgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaaccta 148  Q
    |||| ||||| | |||||||||||| |||||||||||  ||||| ||||||||||  |||||| |  |||||||||||||||||||||||||    
T  7979 actggaacaacatcagcaagataaacaacttagtttcatacctctaagatcaactcacatcaattcttgcgacaaagatcgcatttaaccta 7888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 15802 - 15959
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    ||||||||||||||||||||||||   | ||| ||||  | |||  | | || ||||||| | || |||||||||| |||| ||||||||||||||||||    
T  15802 atgtatatacaattatataacattataagcaacattatttcataagaatcagtcttactggatcattaacagcaaggtaaacaacttagtttctaacctc 15901  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcatt 159  Q
     ||||||||||  |||||| | |  ||||||||||||||||  ||||||| ||||||||    
T  15902 taagatcaactcacatcaactcgaacgacaaagatcgcattccacctaaa-aaggcatt 15959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 159
Target Start/End: Complemental strand, 18196 - 18163
Alignment:
Q  126 cgacaaagatcgcatttaacctaaacaaggcatt 159  Q
    |||||||||| |||||||||||||||||||||||    
T  18196 cgacaaagattgcatttaacctaaacaaggcatt 18163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 54 - 163
Target Start/End: Original strand, 34317 - 34425
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| || | |||||||||| |||| |||||||||||||||||| ||||||||||  |||||| | |  | |||||||||||||| |||||||| ||    
T  34317 cttactggaaaattaacagcaaggtaaacaacttagtttctaacctctaagatcaactcacatcaactagaacaacaaagatcgcattcaacctaaa-aa 34415  T
Q  154 ggcattatgt 163  Q
    || |||||||    
T  34416 ggaattatgt 34425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 149
Target Start/End: Complemental strand, 6255 - 6111
Alignment:
Q  5 atatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctccaag 104  Q
    ||||||| |||||| |||||   ||||| || | || ||| |||| |||||||||||||||| |||||  ||||||  |||||||||||| ||| ||| |    
T  6255 atatacatttatatcacattaataacaacatcaaatcatataattcaggcttactgaaacaacaacagtgagataagcaacttagtttcttacccccatg 6156  T
Q  105 atcaactagcatcaaattgtgcgacaaagatcgcatttaacctaa 149  Q
    |||| ||  |||||| | ||||||||||| || ||||||||||||    
T  6155 atcatctcacatcaactcgtgcgacaaaggtcacatttaacctaa 6111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 149
Target Start/End: Original strand, 78470 - 78614
Alignment:
Q  5 atatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctccaag 104  Q
    ||||||| |||||| |||||   ||||| || | || ||| |||| |||||||||||||||| ||||| |||||||  ||||||||| || ||| ||| |    
T  78470 atatacatttatatcacattattaacaacatcaaatcatataattcaggcttactgaaacaacaacagtaagataagcaacttagttgcttacccccatg 78569  T
Q  105 atcaactagcatcaaattgtgcgacaaagatcgcatttaacctaa 149  Q
    |||||||  |||||| |  |||||||||| || ||||||||||||    
T  78570 atcaactcacatcaactcatgcgacaaaggtcacatttaacctaa 78614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 128896 - 128837
Alignment:
Q  51 aggcttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaact 111  Q
    |||||||||||||||| ||||| |||||||  |||||||||||| ||| ||| ||||||||    
T  128896 aggcttactgaaacaacaacagtaagataagcaacttagtttcttacc-ccatgatcaact 128837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 159
Target Start/End: Complemental strand, 2369 - 2265
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| |||| ||| |||||| |||| |||||||||||||||||| ||||||||||  ||| || | |  || ||||||||||||| |||||||| ||    
T  2369 cttactggaacattaatagcaaggtaaaaaacttagtttctaacctctaagatcaactcacataaactcgaacggcaaagatcgcattcaacctaaa-aa 2271  T
Q  154 ggcatt 159  Q
    ||||||    
T  2270 ggcatt 2265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 159
Target Start/End: Original strand, 11494 - 11591
Alignment:
Q  62 aacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcatt 159  Q
    |||| ||||| |||| |||| |||||||||||||||||| ||||| ||||  |||||| | |  |||||||||||||||| |||||||| | ||||||    
T  11494 aacattaacaccaaggtaaacaacttagtttctaacctctaagattaactcacatcaactcgaacgacaaagatcgcattcaacctaaaaagggcatt 11591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0810 (Bit Score: 37; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 123 - 159
Target Start/End: Original strand, 3196 - 3232
Alignment:
Q  123 gtgcgacaaagatcgcatttaacctaaacaaggcatt 159  Q
    |||||||||||||||||||||||||||||||||||||    
T  3196 gtgcgacaaagatcgcatttaacctaaacaaggcatt 3232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 37; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 123 - 159
Target Start/End: Original strand, 293 - 329
Alignment:
Q  123 gtgcgacaaagatcgcatttaacctaaacaaggcatt 159  Q
    |||||||||||||||||||||||||||||||||||||    
T  293 gtgcgacaaagatcgcatttaacctaaacaaggcatt 329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 37; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 46 - 146
Target Start/End: Original strand, 38507 - 38607
Alignment:
Q  46 aatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaac 145  Q
    |||| |||||||||||||||| ||||| |||||||  |||||||||||| ||| ||  ||||||||  |||||| | |||||| |||| || ||||||||    
T  38507 aattcaggcttactgaaacaacaacagtaagataagcaacttagtttcttacccccgtgatcaactcacatcaactcgtgcgataaaggtctcatttaac 38606  T
Q  146 c 146  Q
    |    
T  38607 c 38607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 37; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 53 - 149
Target Start/End: Complemental strand, 19809 - 19713
Alignment:
Q  53 gcttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaa 149  Q
    |||||||| ||||| ||||| |||||||  |||||||||||| ||| ||||||||||||   |||||   ||||||||||| || ||||||||||||    
T  19809 gcttactggaacaacaacagtaagataagcaacttagtttcttacccccaagatcaactcatatcaacccgtgcgacaaaggtcacatttaacctaa 19713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 37; Significance: 0.000000000004; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 123 - 159
Target Start/End: Complemental strand, 8150 - 8114
Alignment:
Q  123 gtgcgacaaagatcgcatttaacctaaacaaggcatt 159  Q
    |||||||||||||||||||||||||||||||||||||    
T  8150 gtgcgacaaagatcgcatttaacctaaacaaggcatt 8114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 53525 - 53393
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    |||||||||||||||||| |||||   ||||| || | || ||| |  | || ||||||| ||||  ||||  |||||||| |||||||||||| |||||    
T  53525 atgtatatacaattatatcacattataaacaacatcaaatcataaacatcagtcttactggaacatcaacataaagataaacaacttagtttcttacctc 53426  T
Q  101 caagatcaactagcatcaaattgtgcgacaaag 133  Q
     ||||||||||  |||||| | |||||||||||    
T  53425 taagatcaactcacatcaactcgtgcgacaaag 53393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1403 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1403
Description:

Target: scaffold1403; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 149
Target Start/End: Original strand, 739 - 841
Alignment:
Q  46 aatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaac 145  Q
    |||| |||||||||||||||| |||||  ||||||| |||||||||||| |||   | ||||||||  |||||| | ||||||||||| || ||||||||    
T  739 aattcaggcttactgaaacaacaacagttagataaacaacttagtttcttacc-atatgatcaactcacatcaactcgtgcgacaaaggtctcatttaac 837  T
Q  146 ctaa 149  Q
    ||||    
T  838 ctaa 841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 159
Target Start/End: Original strand, 10178 - 10211
Alignment:
Q  126 cgacaaagatcgcatttaacctaaacaaggcatt 159  Q
    ||||||||||||||||||||||||||||||||||    
T  10178 cgacaaagatcgcatttaacctaaacaaggcatt 10211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 148
Target Start/End: Original strand, 97201 - 97297
Alignment:
Q  51 aggcttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaaccta 148  Q
    |||||||||||||||| ||||| |||| ||  |||||||||||| ||| ||| ||||||||  |||||| | ||||||||||| || |||||| ||||    
T  97201 aggcttactgaaacaacaacagtaagaaaagcaacttagtttcttacc-ccatgatcaactcacatcaactcgtgcgacaaaggtcacatttatccta 97297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 148
Target Start/End: Original strand, 106479 - 106575
Alignment:
Q  51 aggcttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaaccta 148  Q
    |||||||||||||||| ||||| |||| ||  |||||||||||| ||| ||| ||||||||  |||||| | ||||||||||| || |||||| ||||    
T  106479 aggcttactgaaacaacaacagtaagaaaagcaacttagtttcttacc-ccatgatcaactcacatcaactcgtgcgacaaaggtcacatttatccta 106575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 159
Target Start/End: Complemental strand, 9690 - 9654
Alignment:
Q  123 gtgcgacaaagatcgcatttaacctaaacaaggcatt 159  Q
    |||||||||||||| ||||||||||||||||||||||    
T  9690 gtgcgacaaagatcacatttaacctaaacaaggcatt 9654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 159
Target Start/End: Complemental strand, 207375 - 207339
Alignment:
Q  123 gtgcgacaaagatcgcatttaacctaaacaaggcatt 159  Q
    ||||||||||||||||||||||||||||||| |||||    
T  207375 gtgcgacaaagatcgcatttaacctaaacaaagcatt 207339  T

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Target: scaffold0737 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 46 - 149
Target Start/End: Complemental strand, 1729 - 1626
Alignment:
Q  46 aatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaac 145  Q
    |||| |||||||||| ||||| || || ||||||   |||||||||||| |||  |||||||||||  |||||| | ||||||||||| || ||| ||||    
T  1729 aattcaggcttactggaacaacaatagtaagataggcaacttagtttcttaccctcaagatcaactcacatcaactcgtgcgacaaaggtcacatgtaac 1630  T
Q  146 ctaa 149  Q
    ||||    
T  1629 ctaa 1626  T

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Target: scaffold0098 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 159
Target Start/End: Original strand, 26855 - 26889
Alignment:
Q  125 gcgacaaagatcgcatttaacctaaacaaggcatt 159  Q
    |||||||||||| ||||||||||||||||||||||    
T  26855 gcgacaaagatcacatttaacctaaacaaggcatt 26889  T

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