View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17731_low_4 (Length: 325)

Name: NF17731_low_4
Description: NF17731
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17731_low_4
NF17731_low_4
[»] chr4 (55 HSPs)
chr4 (111-325)||(54152901-54153115)
chr4 (111-325)||(32238074-32238290)
chr4 (118-325)||(14072366-14072573)
chr4 (185-325)||(51922870-51923011)
chr4 (198-325)||(48550442-48550570)
chr4 (179-325)||(16566229-16566376)
chr4 (185-325)||(26651863-26652004)
chr4 (178-325)||(43772138-43772286)
chr4 (112-325)||(30841983-30842202)
chr4 (185-325)||(43781534-43781674)
chr4 (112-325)||(48407713-48407932)
chr4 (178-325)||(39636708-39636856)
chr4 (178-325)||(42944913-42945061)
chr4 (179-325)||(19592246-19592393)
chr4 (179-325)||(46830084-46830231)
chr4 (179-325)||(49136446-49136593)
chr4 (179-325)||(4954066-4954213)
chr4 (180-325)||(9889350-9889495)
chr4 (205-325)||(29149322-29149443)
chr4 (225-325)||(39187704-39187805)
chr4 (179-325)||(15619541-15619685)
chr4 (197-325)||(28986963-28987089)
chr4 (212-325)||(6138635-6138749)
chr4 (112-321)||(31520390-31520604)
chr4 (187-325)||(26426130-26426268)
chr4 (178-325)||(2175162-2175310)
chr4 (132-325)||(9893583-9893782)
chr4 (178-325)||(49519653-49519801)
chr4 (185-325)||(14564161-14564302)
chr4 (179-325)||(6505125-6505272)
chr4 (115-325)||(38693904-38694119)
chr4 (206-325)||(13167476-13167596)
chr4 (200-325)||(25312660-25312786)
chr4 (211-325)||(48908231-48908344)
chr4 (185-325)||(13183065-13183206)
chr4 (112-325)||(15603211-15603431)
chr4 (179-325)||(56241850-56241997)
chr4 (178-264)||(54735727-54735813)
chr4 (185-264)||(30887230-30887309)
chr4 (200-325)||(54150471-54150597)
chr4 (178-325)||(14075938-14076085)
chr4 (206-325)||(38305962-38306082)
chr4 (206-325)||(54488556-54488676)
chr4 (200-325)||(14054796-14054922)
chr4 (179-260)||(55638868-55638949)
chr4 (207-325)||(46926000-46926119)
chr4 (8-47)||(54152744-54152783)
chr4 (1-47)||(32238383-32238429)
chr4 (211-325)||(48550173-48550288)
chr4 (211-245)||(5025485-5025519)
chr4 (287-321)||(33574211-33574245)
chr4 (200-241)||(47384950-47384991)
chr4 (193-245)||(5937397-5937449)
chr4 (274-325)||(16492946-16492998)
chr4 (205-233)||(43628685-43628713)
[»] chr2 (40 HSPs)
chr2 (111-325)||(14821043-14821257)
chr2 (179-325)||(5916255-5916401)
chr2 (179-325)||(36312225-36312371)
chr2 (180-325)||(8170262-8170407)
chr2 (119-325)||(7472687-7472896)
chr2 (185-325)||(28261248-28261389)
chr2 (212-325)||(1945052-1945166)
chr2 (188-325)||(9988514-9988652)
chr2 (211-325)||(39141483-39141597)
chr2 (205-325)||(2213480-2213601)
chr2 (205-325)||(28127300-28127421)
chr2 (179-325)||(32501934-32502080)
chr2 (112-325)||(36548075-36548294)
chr2 (179-315)||(25940264-25940401)
chr2 (185-325)||(26207942-26208083)
chr2 (179-325)||(28641590-28641737)
chr2 (200-325)||(31562700-31562823)
chr2 (179-325)||(42515989-42516135)
chr2 (205-325)||(23358232-23358353)
chr2 (241-325)||(31224690-31224775)
chr2 (205-325)||(44619074-44619195)
chr2 (185-325)||(7296109-7296250)
chr2 (200-325)||(42089541-42089671)
chr2 (200-325)||(3853869-3853995)
chr2 (1-46)||(14820903-14820948)
chr2 (205-264)||(2234901-2234959)
chr2 (211-325)||(25747895-25748009)
chr2 (242-325)||(2213658-2213742)
chr2 (179-325)||(7295361-7295506)
chr2 (200-325)||(27911375-27911501)
chr2 (206-325)||(18511077-18511197)
chr2 (274-325)||(34433319-34433371)
chr2 (211-325)||(16467066-16467181)
chr2 (205-325)||(2215228-2215347)
chr2 (211-325)||(3602473-3602587)
chr2 (274-321)||(30007570-30007618)
chr2 (275-325)||(23359943-23359994)
chr2 (185-243)||(39106764-39106822)
chr2 (179-224)||(2212769-2212814)
chr2 (200-265)||(3552920-3552985)
[»] chr1 (44 HSPs)
chr1 (111-321)||(6464503-6464713)
chr1 (111-325)||(45709944-45710158)
chr1 (179-325)||(25229970-25230116)
chr1 (112-313)||(40821722-40821922)
chr1 (180-325)||(10470554-10470699)
chr1 (185-325)||(31223343-31223484)
chr1 (179-325)||(20800293-20800440)
chr1 (179-325)||(35569218-35569365)
chr1 (188-321)||(1199799-1199933)
chr1 (112-325)||(13055888-13056107)
chr1 (185-325)||(48510877-48511018)
chr1 (112-325)||(50977356-50977575)
chr1 (185-325)||(43728894-43729034)
chr1 (179-325)||(4369819-4369965)
chr1 (179-325)||(42850235-42850382)
chr1 (169-325)||(12468166-12468322)
chr1 (179-325)||(6166073-6166219)
chr1 (180-325)||(40229486-40229632)
chr1 (179-325)||(7826370-7826517)
chr1 (179-325)||(11023346-11023492)
chr1 (211-325)||(12247415-12247529)
chr1 (179-325)||(5410603-5410749)
chr1 (120-321)||(35535973-35536177)
chr1 (198-325)||(13931605-13931732)
chr1 (208-325)||(25061218-25061336)
chr1 (206-325)||(15884216-15884337)
chr1 (216-319)||(9447533-9447636)
chr1 (179-261)||(31933690-31933772)
chr1 (200-325)||(47123370-47123496)
chr1 (179-264)||(36205154-36205239)
chr1 (200-324)||(50406114-50406239)
chr1 (178-258)||(11051395-11051474)
chr1 (112-179)||(11561739-11561806)
chr1 (8-47)||(45709605-45709644)
chr1 (1-47)||(6464367-6464413)
chr1 (220-321)||(11561826-11561928)
chr1 (217-325)||(23628722-23628830)
chr1 (275-325)||(4347033-4347084)
chr1 (211-325)||(26058236-26058351)
chr1 (118-171)||(4487411-4487464)
chr1 (113-150)||(43729072-43729109)
chr1 (269-325)||(49242998-49243055)
chr1 (297-325)||(43134532-43134560)
chr1 (193-245)||(46033210-46033262)
[»] chr6 (16 HSPs)
chr6 (111-325)||(6208078-6208292)
chr6 (179-325)||(16548078-16548225)
chr6 (179-325)||(13739145-13739291)
chr6 (185-325)||(13744651-13744791)
chr6 (196-325)||(17830013-17830143)
chr6 (178-325)||(10826029-10826177)
chr6 (190-325)||(29409266-29409402)
chr6 (180-325)||(16442365-16442511)
chr6 (179-325)||(21455821-21455966)
chr6 (185-324)||(7215520-7215658)
chr6 (113-321)||(31132334-31132545)
chr6 (179-325)||(33899020-33899167)
chr6 (206-325)||(1312454-1312574)
chr6 (211-325)||(699529-699642)
chr6 (8-47)||(6208394-6208433)
chr6 (211-325)||(21254894-21255008)
[»] chr3 (47 HSPs)
chr3 (111-325)||(44939431-44939644)
chr3 (112-325)||(8424745-8424958)
chr3 (112-325)||(35425206-35425419)
chr3 (112-325)||(30811547-30811760)
chr3 (180-325)||(48189457-48189602)
chr3 (185-325)||(38172322-38172463)
chr3 (112-325)||(42318196-42318415)
chr3 (179-325)||(10334077-10334224)
chr3 (112-325)||(38125457-38125676)
chr3 (179-325)||(16246109-16246256)
chr3 (112-325)||(15511391-15511610)
chr3 (169-325)||(53179778-53179934)
chr3 (206-325)||(53074869-53074988)
chr3 (185-325)||(10853282-10853423)
chr3 (179-319)||(20813085-20813226)
chr3 (112-325)||(38340673-38340891)
chr3 (179-325)||(52966824-52966971)
chr3 (179-325)||(23496263-23496403)
chr3 (179-325)||(3348182-3348329)
chr3 (180-325)||(50664699-50664844)
chr3 (205-325)||(26519629-26519750)
chr3 (179-325)||(31084147-31084293)
chr3 (179-325)||(44224701-44224848)
chr3 (189-325)||(21224939-21225076)
chr3 (211-325)||(23207083-23207196)
chr3 (185-288)||(31618940-31619043)
chr3 (159-321)||(25847946-25848114)
chr3 (193-325)||(34561061-34561194)
chr3 (200-325)||(42475669-42475795)
chr3 (179-325)||(35930677-35930824)
chr3 (208-325)||(30809960-30810078)
chr3 (179-264)||(22736920-22737005)
chr3 (272-325)||(55154534-55154587)
chr3 (8-47)||(44939739-44939778)
chr3 (211-325)||(45423784-45423898)
chr3 (193-325)||(49526684-49526817)
chr3 (251-325)||(4984592-4984667)
chr3 (263-325)||(19877440-19877503)
chr3 (179-260)||(14959658-14959739)
chr3 (211-264)||(32357482-32357535)
chr3 (200-245)||(37698485-37698530)
chr3 (213-250)||(55087593-55087630)
chr3 (275-325)||(7012675-7012726)
chr3 (276-325)||(49330378-49330428)
chr3 (296-325)||(10852728-10852757)
chr3 (193-246)||(44610311-44610363)
chr3 (193-245)||(30811277-30811329)
[»] scaffold0007 (1 HSPs)
scaffold0007 (112-325)||(29138-29351)
[»] chr5 (38 HSPs)
chr5 (112-325)||(2430309-2430522)
chr5 (112-325)||(33953914-33954127)
chr5 (179-325)||(22482142-22482289)
chr5 (179-325)||(41834845-41834992)
chr5 (178-325)||(13253095-13253242)
chr5 (179-325)||(32454490-32454636)
chr5 (211-325)||(10058059-10058174)
chr5 (169-325)||(40495370-40495526)
chr5 (179-325)||(9275496-9275643)
chr5 (205-325)||(3667833-3667954)
chr5 (112-325)||(24045711-24045930)
chr5 (176-325)||(40885160-40885311)
chr5 (187-325)||(40791082-40791220)
chr5 (187-325)||(42146269-42146407)
chr5 (205-325)||(35760168-35760289)
chr5 (196-325)||(4292119-4292249)
chr5 (132-325)||(7714841-7715040)
chr5 (185-325)||(32030675-32030814)
chr5 (185-325)||(3060236-3060375)
chr5 (112-288)||(28869553-28869733)
chr5 (185-325)||(27021087-27021228)
chr5 (208-325)||(39987979-39988097)
chr5 (169-325)||(16158477-16158634)
chr5 (208-325)||(7385944-7386062)
chr5 (208-325)||(8049063-8049181)
chr5 (205-288)||(41740643-41740726)
chr5 (212-325)||(5710398-5710511)
chr5 (217-325)||(34106959-34107068)
chr5 (211-313)||(7178763-7178865)
chr5 (276-325)||(2483726-2483776)
chr5 (211-264)||(2694834-2694887)
chr5 (276-325)||(4569092-4569141)
chr5 (275-325)||(22811075-22811126)
chr5 (211-321)||(41959446-41959556)
chr5 (296-325)||(19784884-19784913)
chr5 (205-245)||(3747683-3747723)
chr5 (205-261)||(16843517-16843573)
chr5 (193-245)||(40979985-40980037)
[»] chr8 (47 HSPs)
chr8 (111-325)||(36121560-36121763)
chr8 (179-325)||(43550838-43550985)
chr8 (185-325)||(22936808-22936949)
chr8 (179-325)||(28425487-28425634)
chr8 (211-325)||(25697975-25698089)
chr8 (179-325)||(44926788-44926934)
chr8 (206-325)||(41289073-41289193)
chr8 (179-325)||(40742071-40742218)
chr8 (179-325)||(8124918-8125064)
chr8 (178-325)||(3467479-3467627)
chr8 (178-325)||(27649692-27649839)
chr8 (188-325)||(3097221-3097359)
chr8 (205-325)||(33627049-33627170)
chr8 (179-325)||(6399123-6399270)
chr8 (179-325)||(40742310-40742455)
chr8 (218-325)||(24897603-24897710)
chr8 (211-325)||(38114424-38114538)
chr8 (185-325)||(440204-440345)
chr8 (189-325)||(4941796-4941933)
chr8 (205-325)||(42148978-42149099)
chr8 (211-325)||(36114056-36114170)
chr8 (206-325)||(15206670-15206790)
chr8 (207-264)||(41981132-41981189)
chr8 (206-325)||(31246330-31246450)
chr8 (205-288)||(29023212-29023295)
chr8 (271-325)||(25497731-25497785)
chr8 (1-46)||(36121829-36121874)
chr8 (179-259)||(30081732-30081812)
chr8 (185-264)||(16915014-16915093)
chr8 (219-325)||(42143379-42143486)
chr8 (211-319)||(45147271-45147380)
chr8 (200-264)||(3619145-3619209)
chr8 (187-261)||(38152254-38152328)
chr8 (179-288)||(26125519-26125628)
chr8 (190-321)||(34342873-34343002)
chr8 (215-288)||(11126499-11126572)
chr8 (200-245)||(24297687-24297732)
chr8 (275-325)||(19649229-19649280)
chr8 (252-325)||(26490953-26491027)
chr8 (210-245)||(41408168-41408203)
chr8 (287-325)||(10552924-10552962)
chr8 (206-244)||(26243065-26243103)
chr8 (287-325)||(30759320-30759358)
chr8 (195-241)||(37458403-37458449)
chr8 (113-150)||(25698153-25698190)
chr8 (237-325)||(26243129-26243218)
chr8 (193-261)||(42600490-42600558)
[»] chr7 (43 HSPs)
chr7 (178-325)||(44967401-44967549)
chr7 (185-325)||(3342756-3342897)
chr7 (187-325)||(38230036-38230175)
chr7 (179-325)||(37639390-37639537)
chr7 (119-325)||(9456001-9456211)
chr7 (193-325)||(10371960-10372093)
chr7 (179-325)||(39391139-39391286)
chr7 (179-325)||(47021879-47022026)
chr7 (178-325)||(48459669-48459817)
chr7 (179-325)||(3622462-3622609)
chr7 (179-325)||(3750647-3750793)
chr7 (180-325)||(37562531-37562677)
chr7 (112-325)||(34365984-34366203)
chr7 (185-325)||(386483-386624)
chr7 (179-322)||(12632088-12632232)
chr7 (178-325)||(34010299-34010446)
chr7 (179-325)||(48134540-48134686)
chr7 (178-263)||(47301622-47301707)
chr7 (178-325)||(42740351-42740499)
chr7 (178-325)||(47217543-47217691)
chr7 (179-325)||(43737941-43738088)
chr7 (200-325)||(43631698-43631823)
chr7 (179-321)||(3375450-3375593)
chr7 (112-325)||(32205812-32206032)
chr7 (231-325)||(37008353-37008447)
chr7 (185-325)||(46541566-46541707)
chr7 (211-300)||(19095929-19096017)
chr7 (211-325)||(1766417-1766532)
chr7 (213-325)||(36920180-36920293)
chr7 (206-325)||(39634167-39634287)
chr7 (211-325)||(32186932-32187047)
chr7 (211-325)||(41715649-41715764)
chr7 (275-325)||(42752193-42752244)
chr7 (207-244)||(37886854-37886891)
chr7 (197-264)||(34011025-34011093)
chr7 (293-325)||(38494291-38494323)
chr7 (206-325)||(42904540-42904660)
chr7 (210-325)||(4228538-4228654)
chr7 (211-325)||(40903170-40903284)
chr7 (296-325)||(7169018-7169047)
chr7 (213-325)||(24770913-24771026)
chr7 (193-245)||(4035908-4035960)
chr7 (200-248)||(43581616-43581664)
[»] scaffold0369 (1 HSPs)
scaffold0369 (175-325)||(8384-8535)
[»] scaffold0381 (1 HSPs)
scaffold0381 (180-325)||(9051-9196)
[»] scaffold0394 (1 HSPs)
scaffold0394 (185-325)||(5845-5987)
[»] scaffold0005 (1 HSPs)
scaffold0005 (185-325)||(253073-253214)
[»] scaffold0983 (1 HSPs)
scaffold0983 (176-325)||(2283-2433)
[»] scaffold0217 (1 HSPs)
scaffold0217 (179-325)||(2042-2189)
[»] scaffold0184 (1 HSPs)
scaffold0184 (193-245)||(9254-9306)
[»] scaffold0041 (1 HSPs)
scaffold0041 (211-325)||(46734-46848)


Alignment Details
Target: chr4 (Bit Score: 191; Significance: 1e-104; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 111 - 325
Target Start/End: Original strand, 54152901 - 54153115
Alignment:
Q  111 caaaatccatttatgattttagataagtttaaataattattttaattcagaatgaaatatttagttttaattataaggataatttagtcattagacattt 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||     
T  54152901 caaaatccatttatgattttagataagtttaaataattattttaattaagattgaaatatttagttttaattataaggataatttagtcattagacattc 54153000  T
Q  211 aaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacataatctattcacattcaactcactt 310  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  54153001 aaaatcaattttgattcaaactattcaaacaacatcaactcatgagaatcacttctagtaaagtgtattcaaacataatcaattcacattcaactcactt 54153100  T
Q  311 ttaaccaaaatcaat 325  Q
    |||||||||||||||    
T  54153101 ttaaccaaaatcaat 54153115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 111 - 325
Target Start/End: Complemental strand, 32238290 - 32238074
Alignment:
Q  111 caaaatccatttatgattttagataagtttaaataattattttaattcagaatgaaatatttagtttt--aattataaggataatttagtcattagacat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  32238290 caaaatccatttatgattttagataagtttaaataattattttaattaagaatgaaatatttagttttttaattataaggataatttagtcattagacat 32238191  T
Q  209 ttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacataatctattcacattcaactcac 308  Q
    | ||||||| |||||||||||||||| ||||||||||||||||||| |||||||||||| || ||||||||||||||||| | |||||||||||||||||    
T  32238190 tcaaaatcagttttgattcaaactatccaaacaacatcaactcatatgaatcacttctaatatagtgtatccaaacataaccaattcacattcaactcac 32238091  T
Q  309 ttttaaccaaaatcaat 325  Q
    |||||||||||||||||    
T  32238090 ttttaaccaaaatcaat 32238074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 118 - 325
Target Start/End: Original strand, 14072366 - 14072573
Alignment:
Q  118 catttatgattttagataagtttaaataattattttaattcagaatgaaatatttagttttaattataaggataatttagtcattagacatttaaaatca 217  Q
    |||||||||||||||||| ||| ||||||||||||||| | ||||||| ||| ||||||||||||| ||||||||||||||||||| ||||| |||||||    
T  14072366 catttatgattttagatatgttcaaataattattttaagtaagaatgagatagttagttttaattaaaaggataatttagtcattacacattcaaaatca 14072465  T
Q  218 attttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacataatctattcacattcaactcacttttaacca 317  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||| || |||||||||||||||| ||    
T  14072466 attttgattcaaactatccaaacaacatcaactcattagaatcacttctattaaagtgtatccaaacataatcaatttaccttcaactcacttttaaaca 14072565  T
Q  318 aaatcaat 325  Q
    ||||||||    
T  14072566 aaatcaat 14072573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 185 - 325
Target Start/End: Original strand, 51922870 - 51923011
Alignment:
Q  185 aaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaac 284  Q
    ||||||| ||| ||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||    
T  51922870 aaggatagtttggtcattatacattcaaaatcaattttgattcaaactatccaaacaacatcaactcataagaattacttttagtaaagtgtatccaaac 51922969  T
Q  285 at-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    || |||| ||||| ||||||||||||||||||||||||||||    
T  51922970 ataaatcaattcagattcaactcacttttaaccaaaatcaat 51923011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 198 - 325
Target Start/End: Complemental strand, 48550570 - 48550442
Alignment:
Q  198 tcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacat-aatctattca 296  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||| |||| |||||    
T  48550570 tcattacacatttaaaatcaattttgattcaaactatccaaacaacatcaactcataagaatcacttctattaaagtttatccaaacataaatcaattca 48550471  T
Q  297 cattcaactcacttttaaccaaaatcaat 325  Q
    ||| |||||||||||||||||||||||||    
T  48550470 catccaactcacttttaaccaaaatcaat 48550442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 179 - 325
Target Start/End: Original strand, 16566229 - 16566376
Alignment:
Q  179 aattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtat 278  Q
    ||||| ||||||| ||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||| || | ||||||||| || ||||||||||    
T  16566229 aattaaaaggatagtttagtcattacacattcaaaatcaattttgattcaaactatccaaacaacatcaacccacatgaatcacttttaataaagtgtat 16566328  T
Q  279 ccaaacat-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||    
T  16566329 ccaaacataaatcaattcacattcaactcacttttaaccaaaatcaat 16566376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 185 - 325
Target Start/End: Complemental strand, 26652004 - 26651863
Alignment:
Q  185 aaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaac 284  Q
    ||||||| ||| ||||||| ||||| |||||||||||||||||||||||| |||| |||||| |||||||||||| |||| |||||||||||||| ||||    
T  26652004 aaggatagtttggtcattatacattcaaaatcaattttgattcaaactatccaaataacatcgactcataagaattacttttagtaaagtgtatctaaac 26651905  T
Q  285 at-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    || |||| ||||||||||||||||||||||||||||||||||    
T  26651904 ataaatcaattcacattcaactcacttttaaccaaaatcaat 26651863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 178 - 325
Target Start/End: Complemental strand, 43772286 - 43772138
Alignment:
Q  178 taattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgta 277  Q
    |||||| ||||||| ||| ||||||| ||| |||||||||||||||||||| | ||| |||||||||||||||| |||||||||||||||  ||||||||    
T  43772286 taattaaaaggatagtttggtcattacacacttaaaatcaattttgattcatattatccaaacaacatcaactcgtaagaatcacttctaaaaaagtgta 43772187  T
Q  278 tccaaacat-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    ||||||||| |||| |||||||| |||||||||||||||||||||||||    
T  43772186 tccaaacataaatcgattcacatccaactcacttttaaccaaaatcaat 43772138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 112 - 325
Target Start/End: Original strand, 30841983 - 30842202
Alignment:
Q  112 aaaatccatttatgattttagataagtttaaataattattttaattcagaatgaaatatttagttttaa------ttataaggataatttagtcattaga 205  Q
    |||||||||||||||||||||||||||| |||||| ||| | || | ||||||  || |||||||||||      ||| ||||||||||| ||||||  |    
T  30841983 aaaatccatttatgattttagataagttcaaataagtatctaaaataagaatgggatgtttagttttaaatacaattaaaaggataattttgtcatttta 30842082  T
Q  206 catttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacataatctattcacattcaact 305  Q
    |||| |||||||||||||||||||||||| ||||  | |||||||||||||||||||||  |   |||||||||||||||||||| |||||| |  ||||    
T  30842083 cattcaaaatcaattttgattcaaactatccaaatgaaatcaactcataagaatcactttcaaacaagtgtatccaaacataatcaattcacctcaaact 30842182  T
Q  306 cacttttaaccaaaatcaat 325  Q
    ||||||||| ||||||||||    
T  30842183 cacttttaatcaaaatcaat 30842202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 185 - 325
Target Start/End: Complemental strand, 43781674 - 43781534
Alignment:
Q  185 aaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaac 284  Q
    ||||||||||| ||||||  ||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||   ||||||||||||||    
T  43781674 aaggataatttggtcattttacattcaaaattaattttgattcaaactatccaaacaacatcaactcataagaatcacttttaaacaagtgtatccaaac 43781575  T
Q  285 ataatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||||| |||||| |  ||||||||||||||||||||||||    
T  43781574 ataatcaattcacctcaaactcacttttaaccaaaatcaat 43781534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 112 - 325
Target Start/End: Complemental strand, 48407932 - 48407713
Alignment:
Q  112 aaaatccatttatgattttagataagtttaaataattattttaattcagaatgaaatatttagttttaa------ttataaggataatttagtcattaga 205  Q
    |||||||| ||||||||||||||||||| |||||| ||| | || | ||||||  || |||||||||||      ||| ||||||||||| ||||||  |    
T  48407932 aaaatccacttatgattttagataagttcaaataagtatctaaaataagaatgggatgtttagttttaaatacaattaaaaggataattttgtcatttta 48407833  T
Q  206 catttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacataatctattcacattcaact 305  Q
    |||| |||||||||||||||||||||||| ||||  | |||||||||||||||||||||  |   |||||||||||||||||||| |||||| |  ||||    
T  48407832 cattcaaaatcaattttgattcaaactatccaaatgaaatcaactcataagaatcactttcaaacaagtgtatccaaacataatcaattcacctcaaact 48407733  T
Q  306 cacttttaaccaaaatcaat 325  Q
    ||||||||||||||||||||    
T  48407732 cacttttaaccaaaatcaat 48407713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 178 - 325
Target Start/End: Original strand, 39636708 - 39636856
Alignment:
Q  178 taattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgta 277  Q
    |||||| ||||||| ||| ||| ||| |||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||||| ||   |||||||    
T  39636708 taattaaaaggatattttggtcgttacacatttaaaatcaattttgattcatactatccaaacaacatcaactcgtaagaatcacttttaagtaagtgta 39636807  T
Q  278 tccaaacat-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    ||||||||| |||| |||||||| |||||||||||||| ||||||||||    
T  39636808 tccaaacataaatcaattcacatccaactcacttttaatcaaaatcaat 39636856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 178 - 325
Target Start/End: Complemental strand, 42945061 - 42944913
Alignment:
Q  178 taattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgta 277  Q
    |||||| ||||||| ||| ||||||| ||||||||||||||||||||| || ||||| |||||||||||||| |||||||||||||| ||   |||| ||    
T  42945061 taattaaaaggatagtttggtcattatacatttaaaatcaattttgatacatactatccaaacaacatcaacacataagaatcacttttaagtaagtata 42944962  T
Q  278 tccaaacat-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    || |||||| |||| ||||||||||||||||||||||||||||||||||    
T  42944961 tctaaacataaatcaattcacattcaactcacttttaaccaaaatcaat 42944913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 179 - 325
Target Start/End: Complemental strand, 19592393 - 19592246
Alignment:
Q  179 aattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtat 278  Q
    ||||| ||| ||||||| ||||||  ||||| |||||||||||| ||||||||||| |||||||| |||| || |||||||||||| |||||||||||||    
T  19592393 aattaaaagaataatttggtcattgtacattcaaaatcaattttcattcaaactatccaaacaacgtcaattcgtaagaatcacttttagtaaagtgtat 19592294  T
Q  279 ccaaacat-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||||||| |||| |||||| | |||||||||||||||||||||||||    
T  19592293 ccaaacataaatcaattcacttccaactcacttttaaccaaaatcaat 19592246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 179 - 325
Target Start/End: Complemental strand, 46830231 - 46830084
Alignment:
Q  179 aattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtat 278  Q
    ||||| ||||||||||| |||| || |||||||||||||||||||||  | | ||| |||||||||||||||||||||||||| || ||  |||||||||    
T  46830231 aattaaaaggataatttggtcaatacacatttaaaatcaattttgatgtagaatatccaaacaacatcaactcataagaatcaattttaagaaagtgtat 46830132  T
Q  279 ccaaacat-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||||||| |||| |||||||| |||||||||||||||||||||||||    
T  46830131 ccaaacataaatcaattcacatccaactcacttttaaccaaaatcaat 46830084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 179 - 325
Target Start/End: Original strand, 49136446 - 49136593
Alignment:
Q  179 aattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtat 278  Q
    ||||| ||||||||||| ||||||  ||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||| ||    |||||||    
T  49136446 aattaaaaggataatttggtcattgtacattcaaaatcaattttgattaaaattattcaaacaacatcaactcataagaatcacttttaagtgagtgtat 49136545  T
Q  279 ccaaacat-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||||||| |||| ||||||||  |||||||||||||||| |||||||    
T  49136546 ccaaacataaatcaattcacatcaaactcacttttaaccataatcaat 49136593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 179 - 325
Target Start/End: Complemental strand, 4954213 - 4954066
Alignment:
Q  179 aattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtat 278  Q
    ||||| ||||||||||  ||||||| ||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||| ||    || |||     
T  4954213 aattaaaaggataattaggtcattacacatttaaaattaattttgattcaacctatccaaacaacatcaactcataagaatcacttttaagtgagggtac 4954114  T
Q  279 ccaaacat-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||||||| |||| ||||||||  ||||||||||||||||||||||||    
T  4954113 ccaaacataaatcaattcacatcaaactcacttttaaccaaaatcaat 4954066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 180 - 325
Target Start/End: Complemental strand, 9889495 - 9889350
Alignment:
Q  180 attataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcac-ttctagtaaagtgtat 278  Q
    |||| ||||||||||||||||||| ||||| |||||||||||| ||||||||||| ||||||||||| ||||||||||||||| ||| |||  |||||||    
T  9889495 attaaaaggataatttagtcattatacattcaaaatcaattttaattcaaactatccaaacaacatctactcataagaatcactttcaagt-gagtgtat 9889397  T
Q  279 ccaaacataatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||||||||  | ||||| ||  ||||||||||||| ||||||||||    
T  9889396 ccaaacatatacaattcatatctaactcacttttaatcaaaatcaat 9889350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 205 - 325
Target Start/End: Complemental strand, 29149443 - 29149322
Alignment:
Q  205 acatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacat-aatctattcacattcaa 303  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||| |||| |||||||| || |  ||||||||||||||| |||| ||||||||||||    
T  29149443 acatttaaaatcaattttgattcaaactatccaaacaatatcaactaataaaaatcacttttaattgagtgtatccaaacataaatcaattcacattcaa 29149344  T
Q  304 ctcacttttaaccaaaatcaat 325  Q
    ||||||||| | ||||||||||    
T  29149343 ctcactttttagcaaaatcaat 29149322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 225 - 325
Target Start/End: Original strand, 39187704 - 39187805
Alignment:
Q  225 ttcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacat-aatctattcacattcaactcacttttaaccaaaatca 323  Q
    |||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||| |||| |||||||||||| | |||||||||||||||||    
T  39187704 ttcaaattattcaaacaacatcaactaacaagaatcacttctagtaaagtgtatccaaacataaatcaattcacattcaaattacttttaaccaaaatca 39187803  T
Q  324 at 325  Q
    ||    
T  39187804 at 39187805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 179 - 325
Target Start/End: Original strand, 15619541 - 15619685
Alignment:
Q  179 aattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtat 278  Q
    ||||| || |||||||||||||||| ||||| || |||| |||||||||||||||| |||||||||||||| || | ||||||||| ||||||  |||||    
T  15619541 aattaaaatgataatttagtcattacacattcaagatca-ttttgattcaaactatccaaacaacatcaacccacatgaatcacttatagtaa--tgtat 15619637  T
Q  279 ccaaacata-atctattcacattcaactcacttttaaccaaaatcaat 325  Q
    ||||||||| ||| |||||||| |||||||||||| ||||||||||||    
T  15619638 ccaaacatacatcaattcacatccaactcactttttaccaaaatcaat 15619685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 197 - 325
Target Start/End: Original strand, 28986963 - 28987089
Alignment:
Q  197 gtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacataatctattca 296  Q
    |||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||  |||  ||||||| ||||||||||| |||||    
T  28986963 gtcattacccatttaaaatcaattttgattcaaactatccaaacaacatcaactcataaaaatcactt-aagt-gagtgtattcaaacataatcaattca 28987060  T
Q  297 cattcaactcacttttaaccaaaatcaat 325  Q
    | |  ||||||||||||||||||||||||    
T  28987061 cctcaaactcacttttaaccaaaatcaat 28987089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 212 - 325
Target Start/End: Complemental strand, 6138749 - 6138635
Alignment:
Q  212 aaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacat-aatctattcacattcaactcactt 310  Q
    ||||||||||| ||||||||||| ||||||||||||||||||| |||||| || ||   |||||||||||||||| |||| |||||||| ||||||||||    
T  6138749 aaatcaattttcattcaaactatccaaacaacatcaactcatatgaatcatttttaaataagtgtatccaaacataaatcaattcacatccaactcactt 6138650  T
Q  311 ttaaccaaaatcaat 325  Q
    |||||||||||||||    
T  6138649 ttaaccaaaatcaat 6138635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 112 - 321
Target Start/End: Complemental strand, 31520604 - 31520390
Alignment:
Q  112 aaaatccatttatgattttagataagtttaaataattattttaattcagaatgaaatatttagttt-----taattataaggataatttagtcattagac 206  Q
    ||||| || ||||||||||||||||||| |||||||||| | || | |||| || ||||||| |||     |||| | || ||| |||| ||||||| ||    
T  31520604 aaaattcaattatgattttagataagttcaaataattatctaaaataagaaagagatatttaatttatatataataaaaatgatgatttggtcattacac 31520505  T
Q  207 atttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacat-aatctattcacattcaact 305  Q
    |||||||||||||||| ||||||||||  |||| ||||||||||||||| |||||||| || | |||  |||| |||||| |||| |||||||  |||||    
T  31520504 atttaaaatcaatttttattcaaactacccaaaaaacatcaactcataaaaatcacttttaat-aagcatatctaaacataaatccattcacacccaact 31520406  T
Q  306 cacttttaaccaaaat 321  Q
    ||||||||||||||||    
T  31520405 cacttttaaccaaaat 31520390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 187 - 325
Target Start/End: Complemental strand, 26426268 - 26426130
Alignment:
Q  187 ggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacat 286  Q
    ||||||| | ||||||| ||||| | |||||||||||||||||  ||| ||||||| ||||||||| ||||||||||| || | ||| ||||||||||||    
T  26426268 ggataatatggtcattatacattcacaatcaattttgattcaatgtatccaaacaatatcaactcaaaagaatcacttttaattaagcgtatccaaacat 26426169  T
Q  287 aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||| ||| | ||  ||||||||||||||||||||||||    
T  26426168 aatcaatttatatctaactcacttttaaccaaaatcaat 26426130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 178 - 325
Target Start/End: Complemental strand, 2175310 - 2175162
Alignment:
Q  178 taattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgta 277  Q
    |||||| ||||||||||||||||||  || || |||||||||||| ||||||||||| |||||||||||||| ||| | |||||||| ||    |||| |    
T  2175310 taattaaaaggataatttagtcattgtacgttcaaaatcaattttaattcaaactatccaaacaacatcaacccatcaaaatcacttttaagcgagtgca 2175211  T
Q  278 tccaaacat-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    ||||||||| |||| ||||||||  ||||||||||||| ||||||||||    
T  2175210 tccaaacataaatcaattcacatcaaactcacttttaatcaaaatcaat 2175162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 132 - 325
Target Start/End: Original strand, 9893583 - 9893782
Alignment:
Q  132 gataagtttaaataattattttaattcagaatgaaatatttagttttaat-----tataaggataatttagtcattagacatttaaaatcaattttgatt 226  Q
    |||||||| |||||||||| | || | | ||||| ||||||| |||||||     || |||||||||||| |||||| ||||| |||||||||||| |||    
T  9893583 gataagttcaaataattatctaaaatgaaaatgagatatttatttttaataacattaaaaggataatttaatcattatacattcaaaatcaattttaatt 9893682  T
Q  227 caaactattcaaacaacatcaactcataagaatcac-ttctagtaaagtgtatccaaacata-atctattcacattcaactcacttttaaccaaaatcaa 324  Q
     ||||||| ||||||||||||||||||||||||||| ||| |||   ||||||||||||||| ||| ||||| ||  ||||||||||| || ||||||||    
T  9893683 taaactatccaaacaacatcaactcataagaatcactttcaagt-gggtgtatccaaacatatatcaattcatatctaactcacttttgacaaaaatcaa 9893781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 178 - 325
Target Start/End: Original strand, 49519653 - 49519801
Alignment:
Q  178 taattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgta 277  Q
    |||||| || |||| ||| ||||||| ||| |||||||||||||| || || ||||| ||||||| ||||| |||||||||||| || ||   |||||||    
T  49519653 taattaaaatgatagtttggtcattacacacttaaaatcaattttaatacatactatccaaacaatatcaattcataagaatcatttttaagcaagtgta 49519752  T
Q  278 tccaaacat-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    ||||||||| |||  |||||||| |||||||||||||||||||||||||    
T  49519753 tccaaacataaataaattcacatccaactcacttttaaccaaaatcaat 49519801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 185 - 325
Target Start/End: Complemental strand, 14564302 - 14564161
Alignment:
Q  185 aaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttct-agtaaagtgtatccaaa 283  Q
    |||||||| || ||||||| | ||| ||||||||||||||||||| |||| |||||||||| |||||||||||||||||| | | | ||| |||||||||    
T  14564302 aaggataagttggtcattatatattcaaaatcaattttgattcaatctatccaaacaacattaactcataagaatcacttttaactgaag-gtatccaaa 14564204  T
Q  284 cat-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    ||| |||| ||||| || |||||||| ||||||||||||||||    
T  14564203 cataaatcaattcatatccaactcacatttaaccaaaatcaat 14564161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 179 - 325
Target Start/End: Original strand, 6505125 - 6505272
Alignment:
Q  179 aattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtat 278  Q
    ||||| |||||||||| |||||||| | ||| |||||||||||||| | ||||||| ||||||||||||| |||| | |||||||| ||    |||||||    
T  6505125 aattaaaaggataattcagtcattatatattcaaaatcaattttgacttaaactatccaaacaacatcaagtcatgataatcacttttatatgagtgtat 6505224  T
Q  279 ccaaacat-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    | |||||| |||| ||||||||  |||||| |||||||||||||||||    
T  6505225 ctaaacataaatcaattcacatcaaactcatttttaaccaaaatcaat 6505272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 115 - 325
Target Start/End: Original strand, 38693904 - 38694119
Alignment:
Q  115 atccatttatgattttagataagtttaaataattattttaattcagaatgaaatatttagtttta------attataaggataatttagtcattagacat 208  Q
    ||||||||||||||||||||||||| ||||||| |||| || | ||| ||| || ||||||||||      |||| ||| ||||||| |||||||  |||    
T  38693904 atccatttatgattttagataagttgaaataatcatttaaaatgagattgagatgtttagttttatatataattaaaagtataatttggtcatta--cat 38694001  T
Q  209 ttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacataatct-attcacattcaactca 307  Q
    | ||||| |||||||||| ||| ||||||| ||| |||||| |||||||||||||| ||    ||||||||||||||||| || |||  || |||||| |    
T  38694002 tcaaaattaattttgatttaaattattcaagcaagatcaacccataagaatcacttttaagcgagtgtatccaaacataaactaatttgcactcaactta 38694101  T
Q  308 cttttaaccaaaatcaat 325  Q
    ||||||  ||||||||||    
T  38694102 cttttagacaaaatcaat 38694119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 206 - 325
Target Start/End: Original strand, 13167476 - 13167596
Alignment:
Q  206 catttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacataa-tctattcacattcaac 304  Q
    ||||||||| |||||||||||||| |||| |||||| ||| ||  |||||||||||||| ||     ||||||||||| |||| || |||||||||||||    
T  13167476 catttaaaagcaattttgattcaatctatccaaacatcattaatacataagaatcacttttaaatgggtgtatccaaatataaatcaattcacattcaac 13167575  T
Q  305 tcacttttaaccaaaatcaat 325  Q
    |||||||||||||||||||||    
T  13167576 tcacttttaaccaaaatcaat 13167596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 200 - 325
Target Start/End: Original strand, 25312660 - 25312786
Alignment:
Q  200 attagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaac-ataatctattcaca 298  Q
    |||| |||| ||||| ||||||||||||||  ||| ||||||||| ||| ||||||||||| ||| ||  ||||||||||||||| | |||| |||||||    
T  25312660 attatacatctaaaagcaattttgattcaatgtatccaaacaacaacaattcataagaatcgcttttaacaaagtgtatccaaacaaaaatcaattcaca 25312759  T
Q  299 ttcaactcacttttaaccaaaatcaat 325  Q
    |  ||||||||||||| ||||||||||    
T  25312760 tctaactcacttttaatcaaaatcaat 25312786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 211 - 325
Target Start/End: Original strand, 48908231 - 48908344
Alignment:
Q  211 aaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacataatctattcacattcaactcactt 310  Q
    ||||||||||||||||||| |||| ||||||||||||||| ||| |||| |||| ||    || |||||||||||||| | ||||||||  |||||||||    
T  48908231 aaaatcaattttgattcaagctatccaaacaacatcaacttatatgaattacttttaagcgag-gtatccaaacataaccaattcacatcaaactcactt 48908329  T
Q  311 ttaaccaaaatcaat 325  Q
    |||||||||||||||    
T  48908330 ttaaccaaaatcaat 48908344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 185 - 325
Target Start/End: Complemental strand, 13183206 - 13183065
Alignment:
Q  185 aaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaac 284  Q
    ||||||| ||| ||||||  ||||| |||||||||||||||| ||| ||| |||| |||||||||| |||| ||||| || ||   ||||||||||||||    
T  13183206 aaggatagtttggtcattttacattcaaaatcaattttgatttaaattatccaaaaaacatcaacttataaaaatcatttttaaataagtgtatccaaac 13183107  T
Q  285 at-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    || |||| |||||| || ||||  ||||||||||||||||||    
T  13183106 ataaatcaattcaccttaaacttgcttttaaccaaaatcaat 13183065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 112 - 325
Target Start/End: Original strand, 15603211 - 15603431
Alignment:
Q  112 aaaatccatttatgattttagataagtttaaataattattttaattcagaatgaaatatttagttttaa------ttataaggataatttagtcattaga 205  Q
    ||||| |||||||||||||||||||||| ||||||| ||   || | | ||||| ||||||||||||||      | | |||||||||||  |||||       
T  15603211 aaaatgcatttatgattttagataagttgaaataatcatcaaaaatgataatgagatatttagttttaaaaacaatcaaaaggataatttgatcattgtg 15603310  T
Q  206 catttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaaca-taatctattcacattcaac 304  Q
    |||| |||||||||||||| | ||| ||| |||||||||||||||||||||||||| || ||   |||| |||| |||||  |||| ||||||||  |||    
T  15603311 cattcaaaatcaattttgacttaaattatccaaacaacatcaactcataagaatcatttttaagcaagtatatctaaacacaaatcaattcacatcaaac 15603410  T
Q  305 tcacttttaaccaaaatcaat 325  Q
    |||||||| |||| |||||||    
T  15603411 tcactttttaccataatcaat 15603431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 179 - 325
Target Start/End: Complemental strand, 56241997 - 56241850
Alignment:
Q  179 aattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtat 278  Q
    ||||| ||||||| ||| ||||||| ||||| |||||||||||||||| |||  ||  |||||  ||||||||||||||||||||| ||    | |||||    
T  56241997 aattaaaaggatattttggtcattatacattcaaaatcaattttgatttaaatcatctaaacattatcaactcataagaatcacttttacattaatgtat 56241898  T
Q  279 ccaaacat-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||||||| |||| ||||| ||  ||||||||||||| ||||||||||    
T  56241897 ccaaacataaatcaattcatatcaaactcacttttaatcaaaatcaat 56241850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 178 - 264
Target Start/End: Complemental strand, 54735813 - 54735727
Alignment:
Q  178 taattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcactt 264  Q
    |||||| | ||||| ||| ||||||| ||||| || ||||||||||||| ||| || ||||||||||||||||||||||||||||||    
T  54735813 taattaaagggatactttggtcattacacattcaagatcaattttgatttaaaatactcaaacaacatcaactcataagaatcactt 54735727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 185 - 264
Target Start/End: Complemental strand, 30887309 - 30887230
Alignment:
Q  185 aaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcactt 264  Q
    |||| |||||| ||||||| ||||| ||||||||||||||| ||||| || |||||| ||| ||||||||||||||||||    
T  30887309 aaggttaatttggtcattacacattcaaaatcaattttgatacaaaccatccaaacatcattaactcataagaatcactt 30887230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 200 - 325
Target Start/End: Original strand, 54150471 - 54150597
Alignment:
Q  200 attagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaac-ataatctattcaca 298  Q
    |||| |||| ||||| ||||||||||| ||  ||| ||||||||| ||||| |||||||||| || ||   |||||||||||||| | |||| |||||||    
T  54150471 attatacatctaaaagcaattttgatttaatgtatccaaacaacaccaacttataagaatcatttttaacgaagtgtatccaaacaaaaatcaattcaca 54150570  T
Q  299 ttcaactcacttttaaccaaaatcaat 325  Q
    |  ||||||||||||| ||||||||||    
T  54150571 tctaactcacttttaatcaaaatcaat 54150597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 178 - 325
Target Start/End: Original strand, 14075938 - 14076085
Alignment:
Q  178 taattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttct-agtaaagtgt 276  Q
    |||||| | ||||| ||| ||||||| ||||| || || |||||||||| ||| || |||||||||||||| ||||||||||||||| | |||| | |||    
T  14075938 taattaaagggatactttggtcattacacattcaagattaattttgatttaaagtactcaaacaacatcaattcataagaatcacttttaagtata-tgt 14076036  T
Q  277 atccaaacat-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
     ||||||||| |||| ||| ||||  ||||||| ||||||||||||||||    
T  14076037 ttccaaacataaatcaatttacatcaaactcac-tttaaccaaaatcaat 14076085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 206 - 325
Target Start/End: Original strand, 38305962 - 38306082
Alignment:
Q  206 catttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacataa-tctattcacattcaac 304  Q
    |||| ||||||||||||||| |||  ||| |||||||||| || | ||||||||||||| |  |  |  |||||||||||||| || |||| ||||||||    
T  38305962 cattcaaaatcaattttgatccaagttatccaaacaacatgaatttataagaatcacttttgctttaaggtatccaaacataaatcaattcgcattcaac 38306061  T
Q  305 tcacttttaaccaaaatcaat 325  Q
    ||||||||||| |||||||||    
T  38306062 tcacttttaacaaaaatcaat 38306082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 206 - 325
Target Start/End: Original strand, 54488556 - 54488676
Alignment:
Q  206 catttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacataa-tctattcacattcaac 304  Q
    |||||||||||||||||||| |||  ||| ||||||| || || | ||||||||||||| |  |  |  |||| ||||||||| || |||||||||||||    
T  54488556 catttaaaatcaattttgatccaagttatccaaacaaaatgaatttataagaatcacttttgctttaaggtattcaaacataaatcaattcacattcaac 54488655  T
Q  305 tcacttttaaccaaaatcaat 325  Q
    ||||||||||| |||||||||    
T  54488656 tcacttttaacaaaaatcaat 54488676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 200 - 325
Target Start/End: Original strand, 14054796 - 14054922
Alignment:
Q  200 attagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacat-aatctattcaca 298  Q
    |||||||||  |||||||||||| ||| ||| |||||||||||||||||||   || |||||||| ||   |||| ||||||||||| |||| |||||||    
T  14054796 attagacatccaaaatcaattttaatttaaagtattcaaacaacatcaacttgaaataatcacttttatataagtttatccaaacataaatcaattcaca 14054895  T
Q  299 ttcaactcacttttaaccaaaatcaat 325  Q
    |  ||||||||||| || ||| |||||    
T  14054896 tcaaactcacttttgactaaactcaat 14054922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 260
Target Start/End: Complemental strand, 55638949 - 55638868
Alignment:
Q  179 aattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatc 260  Q
    ||||| || |||| ||| ||||||| | ||| |||||||||||||||||| | ||| ||||||| |||||||||||||||||    
T  55638949 aattaaaatgatagtttggtcattacatattcaaaatcaattttgattcatattatccaaacaatatcaactcataagaatc 55638868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 325
Target Start/End: Original strand, 46926000 - 46926119
Alignment:
Q  207 atttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacataa-tctattcacattcaact 305  Q
    ||||||||  |||||||||||||| |||  ||| || || || |||||| |||||||| ||    ||||||||||||||||| || ||||||||  ||||    
T  46926000 atttaaaagtaattttgattcaaaatatataaataaaattaattcataaaaatcacttttaaacgagtgtatccaaacataaatcaattcacatctaact 46926099  T
Q  306 cacttttaaccaaaatcaat 325  Q
    ||||||||||||||| ||||    
T  46926100 cacttttaaccaaaaacaat 46926119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 47
Target Start/End: Original strand, 54152744 - 54152783
Alignment:
Q  8 gggagacgtgagggagttattaaaaataactcaattgatc 47  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  54152744 gggagacgtgagggagttattaaaaataacttaattgatc 54152783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 32238429 - 32238383
Alignment:
Q  1 ggggagtgggagacgtgagggagttattaaaaataactcaattgatc 47  Q
    |||||||||||||||| ||||| ||||||||||||||||| ||||||    
T  32238429 ggggagtgggagacgtaagggaattattaaaaataactcatttgatc 32238383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 211 - 325
Target Start/End: Original strand, 48550173 - 48550288
Alignment:
Q  211 aaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacat-aatctattcacattcaactcact 309  Q
    |||||||||||| || ||| |||| ||||||| ||||| ||||| |||| |||| ||    |||| |||||||||| |||| ||| ||||  ||||||||    
T  48550173 aaaatcaattttaatccaatctatccaaacaatatcaattcatatgaattacttttaaatgagtgcatccaaacataaatcaatttacatctaactcact 48550272  T
Q  310 tttaaccaaaatcaat 325  Q
    ||||| ||||||||||    
T  48550273 tttaatcaaaatcaat 48550288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 245
Target Start/End: Original strand, 5025485 - 5025519
Alignment:
Q  211 aaaatcaattttgattcaaactattcaaacaacat 245  Q
    |||||||||||||||||||||||| ||||||||||    
T  5025485 aaaatcaattttgattcaaactatccaaacaacat 5025519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 321
Target Start/End: Original strand, 33574211 - 33574245
Alignment:
Q  287 aatctattcacattcaactcacttttaaccaaaat 321  Q
    |||| ||||||||||||||||||||||||||||||    
T  33574211 aatcaattcacattcaactcacttttaaccaaaat 33574245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 241
Target Start/End: Original strand, 47384950 - 47384991
Alignment:
Q  200 attagacatttaaaatcaattttgattcaaactattcaaaca 241  Q
    |||| |||| |||||||||||||||||||||||||| |||||    
T  47384950 attatacatctaaaatcaattttgattcaaactatttaaaca 47384991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 245
Target Start/End: Complemental strand, 5937449 - 5937397
Alignment:
Q  193 tttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacat 245  Q
    |||||| |||| ||||| |||||||||||||||  ||| ||||||||||||||    
T  5937449 tttagtaattatacattcaaaatcaattttgatcaaaaatattcaaacaacat 5937397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 274 - 325
Target Start/End: Original strand, 16492946 - 16492998
Alignment:
Q  274 tgtatccaaacataa-tctattcacattcaactcacttttaaccaaaatcaat 325  Q
    ||||||||||||||| |  ||||||||||||||||||||||| |||| |||||    
T  16492946 tgtatccaaacataaataaattcacattcaactcacttttaatcaaactcaat 16492998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 233
Target Start/End: Original strand, 43628685 - 43628713
Alignment:
Q  205 acatttaaaatcaattttgattcaaacta 233  Q
    |||||||||||||||||||||||||||||    
T  43628685 acatttaaaatcaattttgattcaaacta 43628713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 187; Significance: 1e-101; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 111 - 325
Target Start/End: Original strand, 14821043 - 14821257
Alignment:
Q  111 caaaatccatttatgattttagataagtttaaataattattttaattcagaatgaaatatttagttttaattataaggataatttagtcattagacattt 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  14821043 caaaatccatttatgattttagataagtttaaataattattttaattaagaatgaaatatttagttttaattataaggataatttagtcattagacattc 14821142  T
Q  211 aaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacataatctattcacattcaactcactt 310  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  14821143 aaaatcaattttgattcaaaatatccaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacataatcaattcacattaaactcactt 14821242  T
Q  311 ttaaccaaaatcaat 325  Q
    ||||| |||||||||    
T  14821243 ttaactaaaatcaat 14821257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 179 - 325
Target Start/End: Complemental strand, 5916401 - 5916255
Alignment:
Q  179 aattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtat 278  Q
    ||||| ||||||| ||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||| | ||||||||| || ||||||||||    
T  5916401 aattaaaaggatagtttagtcattacacattcaaaatcaattttgattcaaactatccaaacaacatcaactcacatgaatcacttttaataaagtgtat 5916302  T
Q  279 ccaaacataatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||    
T  5916301 ccaaacataatcaattcacattcaactcacttttaaccaaaatcaat 5916255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 179 - 325
Target Start/End: Original strand, 36312225 - 36312371
Alignment:
Q  179 aattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtat 278  Q
    ||||| ||||||| ||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||| | ||||||||| || ||||||||||    
T  36312225 aattaaaaggatagtttagtcattacacattcaaaatcaattttgattcaaactatccaaacaacatcaactcacatgaatcacttttaataaagtgtat 36312324  T
Q  279 ccaaacataatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||    
T  36312325 ccaaacataatcaattcacattcaactcacttttaaccaaaatcaat 36312371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 180 - 325
Target Start/End: Original strand, 8170262 - 8170407
Alignment:
Q  180 attataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatc 279  Q
    |||| ||||||||||||||||||| ||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||  ||| |||||||    
T  8170262 attagaaggataatttagtcattatacattcaaaatcaattttaattcaaactatccaaacaacatcaactcataagaatcacatctgttaacgtgtatc 8170361  T
Q  280 caaacataatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    ||||||||||| ||| ||||||||||||||||||| ||||||||||    
T  8170362 caaacataatcaatttacattcaactcacttttaatcaaaatcaat 8170407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 119 - 325
Target Start/End: Complemental strand, 7472896 - 7472687
Alignment:
Q  119 atttatgattttagataagtttaaataattattttaattcagaatgaaata---tttagttttaattataaggataatttagtcattagacatttaaaat 215  Q
    ||||||||| ||||||||||| |||||||||| | || | | ||||| ||    |||| ||  ||||| ||||||||||| ||||||  ||||| |||||    
T  7472896 atttatgatattagataagttaaaataattatctaaaatgaaaatgatattagttttaattacaattacaaggataatttggtcattttacattcaaaat 7472797  T
Q  216 caattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacataatctattcacattcaactcacttttaac 315  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||   |||||||||||||||||||| ||||||||  ||||||||||||||    
T  7472796 caattttgattcaaactatccaaacaacatcaactcataagaatcacttttaaataagtgtatccaaacataatcaattcacatcaaactcacttttaac 7472697  T
Q  316 caaaatcaat 325  Q
    ||||||||||    
T  7472696 caaaatcaat 7472687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 185 - 325
Target Start/End: Original strand, 28261248 - 28261389
Alignment:
Q  185 aaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaac 284  Q
    |||||||| || ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    || |||||||||     
T  28261248 aaggataagttggtcattatacatttaaaattaattttgattcaaactattcaaacaacatcaactcataagaatcacttctatgtgagagtatccaaat 28261347  T
Q  285 at-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    || |||| |||||||| |||||||||||||| ||||||||||    
T  28261348 ataaatcaattcacatccaactcacttttaagcaaaatcaat 28261389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 212 - 325
Target Start/End: Complemental strand, 1945166 - 1945052
Alignment:
Q  212 aaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacat-aatctattcacattcaactcactt 310  Q
    ||||||||||||||||||||||| |||||||||||||| || | ||||||||| || |||||||||||||||||| |||| |||||||||||||||||||    
T  1945166 aaatcaattttgattcaaactatccaaacaacatcaacccacatgaatcacttttaataaagtgtatccaaacataaatcaattcacattcaactcactt 1945067  T
Q  311 ttaaccaaaatcaat 325  Q
    |||||||||||||||    
T  1945066 ttaaccaaaatcaat 1945052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 188 - 325
Target Start/End: Complemental strand, 9988652 - 9988514
Alignment:
Q  188 gataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacat- 286  Q
    |||| ||| ||||||| ||||| |||||||||||| ||||||||||| ||||||||||||||||||| ||||||||| ||   ||||||||||||||||     
T  9988652 gatagtttggtcattacacattcaaaatcaattttcattcaaactatccaaacaacatcaactcatatgaatcacttttaaataagtgtatccaaacata 9988553  T
Q  287 aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||| |||||||| ||||||||||||||| |||||||||    
T  9988552 aatcaattcacatccaactcacttttaacaaaaatcaat 9988514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 211 - 325
Target Start/End: Complemental strand, 39141597 - 39141483
Alignment:
Q  211 aaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacataatctattcacattcaactcactt 310  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| || ||    ||||||||||||||||||| ||||| || ||||||||||    
T  39141597 aaaatcaattttgattcaaactatccaaacaacatcaactcataagaatcatttttaaatgagtgtatccaaacataatcaattcatatccaactcactt 39141498  T
Q  311 ttaaccaaaatcaat 325  Q
    |||||||||||||||    
T  39141497 ttaaccaaaatcaat 39141483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 205 - 325
Target Start/End: Original strand, 2213480 - 2213601
Alignment:
Q  205 acatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacat-aatctattcacattcaa 303  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||| |||| |||||||| || |  ||||||||||||||| |||| ||||||||||||    
T  2213480 acatttaaaatcaattttgattcaaactatccaaacaatatcaactaataaaaatcacttttaattgagtgtatccaaacataaatcaattcacattcaa 2213579  T
Q  304 ctcacttttaaccaaaatcaat 325  Q
    ||||||||| | ||||||||||    
T  2213580 ctcactttttagcaaaatcaat 2213601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 205 - 325
Target Start/End: Complemental strand, 28127421 - 28127300
Alignment:
Q  205 acatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacat-aatctattcacattcaa 303  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||| |||| |||||||| || |  ||||||||||||||| |||| ||||||||||||    
T  28127421 acatttaaaatcaattttgattcaaactatccaaacaatatcaactaataaaaatcacttttaattgagtgtatccaaacataaatcaattcacattcaa 28127322  T
Q  304 ctcacttttaaccaaaatcaat 325  Q
    ||||||||| | ||||||||||    
T  28127321 ctcactttttagcaaaatcaat 28127300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 179 - 325
Target Start/End: Original strand, 32501934 - 32502080
Alignment:
Q  179 aattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtat 278  Q
    ||||| |||| ||| || |||||||  ||||||||||||||||||||||||||||  ||||||| |||||||| ||| ||| |||| || |  | |||||    
T  32501934 aattaaaagggtaagttggtcattacccatttaaaatcaattttgattcaaactacccaaacaatatcaactcgtaaaaattacttttaattgaatgtat 32502033  T
Q  279 ccaaacataatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||||||||||| |||||| |  ||||||||||||||||||||||||    
T  32502034 ccaaacataatcaattcacctaaaactcacttttaaccaaaatcaat 32502080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 112 - 325
Target Start/End: Original strand, 36548075 - 36548294
Alignment:
Q  112 aaaatccatttatgattttagataagtttaaataattattttaattcagaatgaaatatttagttttaattataa------ggataatttagtcattaga 205  Q
    ||||| |||||||||||||||||||||| |||||||||| | || |  |||| | |||||||||||||| |||||      ||||||||||||||||  |    
T  36548075 aaaatgcatttatgattttagataagttaaaataattatctgaaatatgaataagatatttagttttaaatataattaaaaggataatttagtcattgta 36548174  T
Q  206 catttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacat-aatctattcacattcaac 304  Q
    | || |||||||||||| ||| ||| ||| |||||||||||||| ||||| ||||| ||  |||  || |||||||||||| |||| ||||||||   ||    
T  36548175 cgttcaaaatcaattttaatttaaattatccaaacaacatcaacccataaaaatcattttaagt-gagagtatccaaacataaatcaattcacatcagac 36548273  T
Q  305 tcacttttaaccaaaatcaat 325  Q
    |||||||||| ||||||||||    
T  36548274 tcacttttaatcaaaatcaat 36548294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 179 - 315
Target Start/End: Complemental strand, 25940401 - 25940264
Alignment:
Q  179 aattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtat 278  Q
    ||||| ||||||||||| ||||||| | ||| |||||||||||||||||||||| | |||||||||||| ||||||| |||||||||||    |||||||    
T  25940401 aattagaaggataatttggtcattatatattcaaaatcaattttgattcaaactgtccaaacaacatcatctcataataatcacttctatacgagtgtat 25940302  T
Q  279 ccaaacat-aatctattcacattcaactcacttttaac 315  Q
     |||| || |||| ||||||||  ||||||||||||||    
T  25940301 tcaaatataaatcaattcacatcaaactcacttttaac 25940264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 185 - 325
Target Start/End: Complemental strand, 26208083 - 26207942
Alignment:
Q  185 aaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaac 284  Q
    ||||||| ||| ||||||  |||||||||||||||||||||||| |  || |||||||||||||||  ||||||||| || || | ||||||||| ||||    
T  26208083 aaggatagtttggtcattgtacatttaaaatcaattttgattcatataatccaaacaacatcaacttgtaagaatcaattttaattaagtgtatcaaaac 26207984  T
Q  285 at-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    || |||| |||||||| ||||| |||||||||||||| ||||    
T  26207983 ataaatcaattcacatccaactgacttttaaccaaaaccaat 26207942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 179 - 325
Target Start/End: Original strand, 28641590 - 28641737
Alignment:
Q  179 aattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttct-agtaaagtgta 277  Q
    ||||| ||||||||||| ||||||| |||||||||||||||||| ||||||  ||| ||||||||||||||| |||| |||||||| | | | |||| ||    
T  28641590 aattaaaaggataatttggtcattacacatttaaaatcaattttaattcaacatatccaaacaacatcaacttataataatcacttttaaatgaagt-ta 28641688  T
Q  278 tccaaacat-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
     ||||| || |||| |||||||| |||||||| ||||||||||||||||    
T  28641689 cccaaatataaatcaattcacatccaactcacatttaaccaaaatcaat 28641737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 200 - 325
Target Start/End: Complemental strand, 31562823 - 31562700
Alignment:
Q  200 attagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacataatctattcacat 299  Q
    |||| ||||| |||||||||||||||||||| ||| ||||||| || |||||||||||||||||| ||  || | || ||||||||||||| |||||| |    
T  31562823 attacacattcaaaatcaattttgattcaaattatccaaacaatataaactcataagaatcactttta--aacgagtgtccaaacataatcaattcacct 31562726  T
Q  300 tcaactcacttttaaccaaaatcaat 325  Q
      || |||||||||||||||||||||    
T  31562725 caaattcacttttaaccaaaatcaat 31562700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 179 - 325
Target Start/End: Complemental strand, 42516135 - 42515989
Alignment:
Q  179 aattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtat 278  Q
    ||||| || |||||||| || |||| ||||| |||||||||||| ||||||||||| ||||||||||||||||  |||||||| || |     ||| |||    
T  42516135 aattaaaaagataatttggttattatacattcaaaatcaattttaattcaaactatccaaacaacatcaactcgaaagaatcattttttaatgagtatat 42516036  T
Q  279 ccaaacataatctattcacattcaactcacttttaaccaaaatcaat 325  Q
     ||||||||||| ||||||||  |||||||||||||| |||||||||    
T  42516035 tcaaacataatcaattcacatcaaactcacttttaactaaaatcaat 42515989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 205 - 325
Target Start/End: Original strand, 23358232 - 23358353
Alignment:
Q  205 acatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacataatctatt-cacattcaa 303  Q
    ||||| |||||||||||||||||||||||| |||||||||| ||||||| | |||||||| ||   |||||||||||||||||| ||||| ||  |  ||    
T  23358232 acattcaaaatcaattttgattcaaactatccaaacaacattaactcatcacaatcacttttaaacaagtgtatccaaacataaactatttcatctcaaa 23358331  T
Q  304 ctcacttttaaccaaaatcaat 325  Q
    ||||||||||| ||||||||||    
T  23358332 ctcacttttaatcaaaatcaat 23358353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 241 - 325
Target Start/End: Original strand, 31224690 - 31224775
Alignment:
Q  241 aacatcaactcataagaatcacttctagtaaagtgtatccaaacat-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||||||||||||||||||||||| ||||||| | ||||||||||| |||| |||||||| ||||||||||||||| |||||||||    
T  31224690 aacatcaactcataagaatcacttttagtaaaatatatccaaacataaatcaattcacatccaactcacttttaactaaaatcaat 31224775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 205 - 325
Target Start/End: Complemental strand, 44619195 - 44619074
Alignment:
Q  205 acatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacat-aatctattcacattcaa 303  Q
    ||||| |||||| ||||| ||||||||||| |||||||||||||||||||| ||||| || ||   |||||||||||||||| |||| |||| | |  ||    
T  44619195 acattcaaaatcgattttaattcaaactatccaaacaacatcaactcataataatcatttttaaacaagtgtatccaaacataaatcaattcccctcaaa 44619096  T
Q  304 ctcacttttaaccaaaatcaat 325  Q
    ||||||||||||||||||||||    
T  44619095 ctcacttttaaccaaaatcaat 44619074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 185 - 325
Target Start/End: Original strand, 7296109 - 7296250
Alignment:
Q  185 aaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaac 284  Q
    ||||||||||  ||||||| | ||| |||||||||||||| | ||||||| |||| |||||||| |||| | |||||||| ||    |||||||||||||    
T  7296109 aaggataattcggtcattatatattcaaaatcaattttgacttaaactatccaaataacatcaagtcatgataatcacttttatatgagtgtatccaaac 7296208  T
Q  285 at-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    || |||| ||||||||  |||||| |||||||||||||||||    
T  7296209 ataaatcaattcacatcaaactcatttttaaccaaaatcaat 7296250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 200 - 325
Target Start/End: Complemental strand, 42089671 - 42089541
Alignment:
Q  200 attagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtg----tatccaaacat-aatctatt 294  Q
    |||| |||| ||||| || ||||||||| |  ||| ||||||||||||||||||||||||||||| ||   |||||    ||||||||||| |||| |||    
T  42089671 attatacatctaaaagcagttttgattcgatttatccaaacaacatcaactcataagaatcacttttaaataagtgtatctatccaaacataaatcaatt 42089572  T
Q  295 cacattcaactcacttttaaccaaaatcaat 325  Q
    |||||||||||||||||||| ||||||||||    
T  42089571 cacattcaactcacttttaatcaaaatcaat 42089541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 200 - 325
Target Start/End: Original strand, 3853869 - 3853995
Alignment:
Q  200 attagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacataa-tctattcaca 298  Q
    |||| ||||| |||| ||||||||||||||||||| ||||||||||  | | |||||||||| || ||    | ||||||||||||||| || ||| |||    
T  3853869 attacacattcaaaagcaattttgattcaaactatccaaacaacatagattgataagaatcaattttacatgaatgtatccaaacataaatcaatttaca 3853968  T
Q  299 ttcaactcacttttaaccaaaatcaat 325  Q
    |||||||||||||||| ||||||||||    
T  3853969 ttcaactcacttttaatcaaaatcaat 3853995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 14820903 - 14820948
Alignment:
Q  1 ggggagtgggagacgtgagggagttattaaaaataactcaattgat 46  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  14820903 ggggagtgggagacgtgagggagttattaaaaataactcaattgat 14820948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 205 - 264
Target Start/End: Original strand, 2234901 - 2234959
Alignment:
Q  205 acatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcactt 264  Q
    ||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||    
T  2234901 acatttaaaattaattttgattcaaactatccaaacaacat-aactcataagaatcactt 2234959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 211 - 325
Target Start/End: Complemental strand, 25748009 - 25747895
Alignment:
Q  211 aaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacat-aatctattcacattcaactcact 309  Q
    |||| ||||||||||||||||||  |||||||||| || | |||||||||| || |||   | ||||||||||||| |||| ||| ||||||||||||||    
T  25748009 aaaagcaattttgattcaaactacccaaacaacataaattgataagaatcaattttaggttattgtatccaaacataaatcaatt-acattcaactcact 25747911  T
Q  310 tttaaccaaaatcaat 325  Q
    ||||| ||||||||||    
T  25747910 tttaatcaaaatcaat 25747895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 242 - 325
Target Start/End: Original strand, 2213658 - 2213742
Alignment:
Q  242 acatcaactcataagaatcacttctagtaaagtgtatccaaacataa-tctattcacattcaactcacttttaaccaaaatcaat 325  Q
    ||||||||||||||||||||||| ||   ||||||||||||| | || || ||||||||  ||||||||||||||||||||||||    
T  2213658 acatcaactcataagaatcacttttaaataagtgtatccaaagacaaatcaattcacatcaaactcacttttaaccaaaatcaat 2213742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 179 - 325
Target Start/End: Complemental strand, 7295506 - 7295361
Alignment:
Q  179 aattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtat 278  Q
    ||||| ||||||||||  ||||||| | ||| |||||||| ||||| | ||||||| |||||||||||||||||| | |||||||| ||   | ||||||    
T  7295506 aattaaaaggataattcggtcattatatattcaaaatcaagtttgacttaaactatccaaacaacatcaactcatgataatcactttta--tatgtgtat 7295409  T
Q  279 ccaaacat-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||||||| |||| ||| || |  |||||| ||||||||| |||||||    
T  7295408 ccaaacataaatcaatttacgtcaaactcatttttaaccagaatcaat 7295361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 200 - 325
Target Start/End: Original strand, 27911375 - 27911501
Alignment:
Q  200 attagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacat-aatctattcaca 298  Q
    ||||||||| ||||||||||||| ||| ||| ||| |||| ||||||||||   || |||||||| ||    ||| ||||||||||| |||| |||||||    
T  27911375 attagacatctaaaatcaattttaatttaaagtatccaaataacatcaacttgaaataatcacttttaaatgagtatatccaaacataaatcaattcaca 27911474  T
Q  299 ttcaactcacttttaaccaaaatcaat 325  Q
    |  |||||||||||||||||| |||||    
T  27911475 tcaaactcacttttaaccaaactcaat 27911501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 206 - 325
Target Start/End: Original strand, 18511077 - 18511197
Alignment:
Q  206 catttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacataa-tctattcacattcaac 304  Q
    |||| |||||||||||||||| ||| ||| ||||||||||||  | |||||||||| || ||      ||||||||||||||| || ||| ||||| ||     
T  18511077 cattcaaaatcaattttgatttaaattatccaaacaacatcactttataagaatcatttttacattgatgtatccaaacataaatcaattaacatttaaa 18511176  T
Q  305 tcacttttaaccaaaatcaat 325  Q
    |||||||||||||||||||||    
T  18511177 tcacttttaaccaaaatcaat 18511197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 274 - 325
Target Start/End: Complemental strand, 34433371 - 34433319
Alignment:
Q  274 tgtatccaaacataa-tctattcacattcaactcacttttaaccaaaatcaat 325  Q
    ||||||||||||||| || ||||||||||||||||||||||| ||||||||||    
T  34433371 tgtatccaaacataaatcaattcacattcaactcacttttaatcaaaatcaat 34433319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 211 - 325
Target Start/End: Original strand, 16467066 - 16467181
Alignment:
Q  211 aaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacat-aatctattcacattcaactcact 309  Q
    ||||| |||||||||  ||||||| ||||| |||||||| |||||||||||||| ||    |   ||||||||||| |||| ||| ||||  ||||||||    
T  16467066 aaaattaattttgatctaaactatccaaactacatcaacccataagaatcacttttacattatcatatccaaacataaatcaatttacatctaactcact 16467165  T
Q  310 tttaaccaaaatcaat 325  Q
    ||||||||||||||||    
T  16467166 tttaaccaaaatcaat 16467181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 325
Target Start/End: Original strand, 2215228 - 2215347
Alignment:
Q  205 acatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacataa-tctattcacattcaa 303  Q
    ||||| |||||||||| | ||| ||| ||| ||||||||||||||||| ||  || | || ||   |||||||||||||||||| || |||||| |  ||    
T  2215228 acattcaaaatcaattctaatttaaattatccaaacaacatcaactcaaaa--attatttttaaacaagtgtatccaaacataaatcaattcacctcaaa 2215325  T
Q  304 ctcacttttaaccaaaatcaat 325  Q
    ||||||||||||||||||||||    
T  2215326 ctcacttttaaccaaaatcaat 2215347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 325
Target Start/End: Complemental strand, 3602587 - 3602473
Alignment:
Q  211 aaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacataatctattcacattcaactcactt 310  Q
    |||||||||||| ||||||||||| |||||||||| || | |||| |||||||| || |  | | ||||||||||||||  | | |  ||||||||||||    
T  3602587 aaaatcaattttaattcaaactatccaaacaacatgaattaataaaaatcacttttattttaatatatccaaacataattcaattaagttcaactcactt 3602488  T
Q  311 ttaaccaaaatcaat 325  Q
    |||  ||||||||||    
T  3602487 ttagacaaaatcaat 3602473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 321
Target Start/End: Complemental strand, 30007618 - 30007570
Alignment:
Q  274 tgtatccaaacataa-tctattcacattcaactcacttttaaccaaaat 321  Q
    |||| |||||||||| || ||||||||||||||||||||||||||||||    
T  30007618 tgtaaccaaacataaatcaattcacattcaactcacttttaaccaaaat 30007570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 275 - 325
Target Start/End: Complemental strand, 23359994 - 23359943
Alignment:
Q  275 gtatccaaacataa-tctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||||||||||||| ||  || ||||||||||||||||||||||||||||||    
T  23359994 gtatccaaacataaatcactttacattcaactcacttttaaccaaaatcaat 23359943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 243
Target Start/End: Complemental strand, 39106822 - 39106764
Alignment:
Q  185 aaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaac 243  Q
    ||||||||||| ||||||  | |||||||||||||||||||||||| |||  |||||||    
T  39106822 aaggataatttggtcattgtatatttaaaatcaattttgattcaaattatctaaacaac 39106764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 2212769 - 2212814
Alignment:
Q  179 aattataaggataatttagtcattagacatttaaaatcaattttga 224  Q
    ||||| ||||||||||| ||||||  ||||||||||||||||||||    
T  2212769 aattaaaaggataatttggtcattgcacatttaaaatcaattttga 2212814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 265
Target Start/End: Complemental strand, 3552985 - 3552920
Alignment:
Q  200 attagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttc 265  Q
    |||| |||||||| ||||||||||||||||| ||| ||||||| || || | |||||||| |||||    
T  3552985 attacacatttaagatcaattttgattcaaattatccaaacaatatgaaatgataagaattacttc 3552920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 183; Significance: 6e-99; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 111 - 321
Target Start/End: Original strand, 6464503 - 6464713
Alignment:
Q  111 caaaatccatttatgattttagataagtttaaataattattttaattcagaatgaaatatttagttttaattataaggataatttagtcattagacattt 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  6464503 caaaatccatttatgattttagataagtttaaataattattttaattaagaatgaaatatttagttttaattataaggataatttagtcattagacattc 6464602  T
Q  211 aaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacataatctattcacattcaactcactt 310  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||||| |||||||||    
T  6464603 aaaatcaattttgattcaaactatccaaacaacatcaactcataagaatcacttctagtaaagtgtataaaaacataatcaattcacattaaactcactt 6464702  T
Q  311 ttaaccaaaat 321  Q
    |||||||||||    
T  6464703 ttaaccaaaat 6464713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 111 - 325
Target Start/End: Original strand, 45709944 - 45710158
Alignment:
Q  111 caaaatccatttatgattttagataagtttaaataattattttaattcagaatgaaatatttagttttaattataaggataatttagtcattagacattt 210  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||     
T  45709944 caaaatccatttatgattttagataaatttaaataattattttaattaagattgaaatatttagttttaattataaggataatttagtcattagacattc 45710043  T
Q  211 aaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacataatctattcacattcaactcactt 310  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||    
T  45710044 aaaatcaattttgattcaaactatccaaacaacatcaactcataagaatcacttctagtaaagtgtattcaaacataatcaattcacatacaactcactt 45710143  T
Q  311 ttaaccaaaatcaat 325  Q
    |||| ||||||||||    
T  45710144 ttaatcaaaatcaat 45710158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 179 - 325
Target Start/End: Original strand, 25229970 - 25230116
Alignment:
Q  179 aattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtat 278  Q
    ||||| ||||||||||| ||||||| ||| | |||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||    
T  25229970 aattaaaaggataatttggtcattacacactcaaaatcaattttcattcaaactatccaaacaacatcaactaataagaatcacttctattaaagtgtat 25230069  T
Q  279 ccaaacataatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||    
T  25230070 ccaaacataatcaattcacattcaactcacttttaactaaaatcaat 25230116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 112 - 313
Target Start/End: Original strand, 40821722 - 40821922
Alignment:
Q  112 aaaatccatttatgattttagataagtttaaataattattttaattcagaatgaaatatttagttttaattataaggataatttagtcattagacattta 211  Q
    ||||| ||||||| |||||||||||||| ||||||||||||||| | | ||||  ||||||||||||||||| ||||||||||||||||||  ||||| |    
T  40821722 aaaattcatttataattttagataagtt-aaataattattttaactaaaaatgggatatttagttttaattaaaaggataatttagtcattgcacattca 40821820  T
Q  212 aaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacataatctattcacattcaactcacttt 311  Q
    || |||||||||||||||| ||| |||| |||||||||  ||||||||||||| |  |||||||||||| ||||||||| |||||||||||||||| |||    
T  40821821 aactcaattttgattcaaattatccaaataacatcaacaaataagaatcacttatgttaaagtgtatcctaacataatcaattcacattcaactcatttt 40821920  T
Q  312 ta 313  Q
    ||    
T  40821921 ta 40821922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 180 - 325
Target Start/End: Original strand, 10470554 - 10470699
Alignment:
Q  180 attataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatc 279  Q
    |||| |||||||||||||||| || ||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||  ||| |||||||    
T  10470554 attagaaggataatttagtcactatacattcaaaatcaattttaattcaaactatccaaacaacatcaactcataagaatcacttctgttaacgtgtatc 10470653  T
Q  280 caaacataatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    ||||||||||| ||| ||||||||||||||||||| ||||||||||    
T  10470654 caaacataatcaatttacattcaactcacttttaatcaaaatcaat 10470699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 185 - 325
Target Start/End: Original strand, 31223343 - 31223484
Alignment:
Q  185 aaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaac 284  Q
    ||||||| ||| ||||||| ||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  31223343 aaggatagtttggtcattacacattcaaaatcaattttaattcaaactatccaaacaacatcaactcataagaatcacttctattaaagtgtatccaaac 31223442  T
Q  285 at-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    || |||| |||||||| |||||||||||||||||||||||||    
T  31223443 ataaatcaattcacatccaactcacttttaaccaaaatcaat 31223484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 179 - 325
Target Start/End: Complemental strand, 20800440 - 20800293
Alignment:
Q  179 aattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtat 278  Q
    ||||| ||||||||||||||||||| ||||| ||||||||| |||||||||||||| |||||||||||||| || | ||||||||| || ||||||||||    
T  20800440 aattaaaaggataatttagtcattatacattcaaaatcaatattgattcaaactatccaaacaacatcaacccacatgaatcacttttaataaagtgtat 20800341  T
Q  279 ccaaacat-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||    
T  20800340 ccaaacataaatcaattcacattcaactcacttttaaccaaaatcaat 20800293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 179 - 325
Target Start/End: Complemental strand, 35569365 - 35569218
Alignment:
Q  179 aattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtat 278  Q
    ||||| || |||| ||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||| || | ||||||||| || ||||||||||    
T  35569365 aattaaaatgatagtttagtcattatacattcaaaatcaattttgattcaaactatccaaacaacatcaacccacatgaatcacttttaataaagtgtat 35569266  T
Q  279 ccaaacat-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||    
T  35569265 ccaaacataaatcaattcacattcaactcacttttaaccaaaatcaat 35569218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 188 - 321
Target Start/End: Original strand, 1199799 - 1199933
Alignment:
Q  188 gataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacat- 286  Q
    |||| ||||||||||| || || |||||||||||||||||||||||| |||||||||||||  || |||||||||||||| ||||||||||||||||||     
T  1199799 gatagtttagtcattacacgttcaaaatcaattttgattcaaactatccaaacaacatcaatccacaagaatcacttctaataaagtgtatccaaacata 1199898  T
Q  287 aatctattcacattcaactcacttttaaccaaaat 321  Q
    |||| ||||||||||||||||||||||||||||||    
T  1199899 aatcaattcacattcaactcacttttaaccaaaat 1199933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 112 - 325
Target Start/End: Original strand, 13055888 - 13056107
Alignment:
Q  112 aaaatccatttatgattttagataagtttaaataattattttaattcagaatgaaatatttagttttaa------ttataaggataatttagtcattaga 205  Q
    ||||||||||||||||||||||||| || |||| ||||| | |||| ||||||| ||||||| ||||||      ||| |||| |||||| |||||||      
T  13055888 aaaatccatttatgattttagataaattcaaatgattatctaaattaagaatgagatatttaattttaaacacagttaaaagggtaatttcgtcattacg 13055987  T
Q  206 catttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacat-aatctattcacattcaac 304  Q
    |||| |||||||||||| ||||||||||| ||||||| |||||||||||| |||||||| || | ||| |||| ||||||| |||| ||||||| |||||    
T  13055988 cattcaaaatcaatttttattcaaactatccaaacaatatcaactcataaaaatcacttttaat-aagcgtattcaaacataaatcaattcacactcaac 13056086  T
Q  305 tcacttttaaccaaaatcaat 325  Q
    |||||||||||||||||||||    
T  13056087 tcacttttaaccaaaatcaat 13056107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 185 - 325
Target Start/End: Original strand, 48510877 - 48511018
Alignment:
Q  185 aaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaac 284  Q
    ||||||| |||  |||||| ||| ||||||||||||||||| || ||||||||||||||||||| ||||||||||||||| ||   ||||||||||||||    
T  48510877 aaggatagtttgatcattacacacttaaaatcaattttgatacatactattcaaacaacatcaattcataagaatcacttttaagcaagtgtatccaaac 48510976  T
Q  285 at-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    || |||| ||||||||||||||||||||||||||||||||||    
T  48510977 ataaatcaattcacattcaactcacttttaaccaaaatcaat 48511018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 112 - 325
Target Start/End: Complemental strand, 50977575 - 50977356
Alignment:
Q  112 aaaatccatttatgattttagataagtttaaataattattttaattcagaatgaaatatttagttttaa------ttataaggataatttagtcattaga 205  Q
    ||||||||||||||||||||||||| || |||| ||||| | |||| ||||||| ||||||| ||||||      ||| |||| |||||||||||||| |    
T  50977575 aaaatccatttatgattttagataaattcaaatgattatctaaattaagaatgagatatttaattttaaacacagttaaaagggtaatttagtcattaca 50977476  T
Q  206 catttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacat-aatctattcacattcaac 304  Q
    |||| |||||||||||| ||||||||||| ||||||| ||| |||||||| |||||||| || | ||| |||||||||||| || | |||||||   |||    
T  50977475 cattcaaaatcaatttttattcaaactatccaaacaatatctactcataaaaatcacttgtaat-aagcgtatccaaacataaaacaattcacaccaaac 50977377  T
Q  305 tcacttttaaccaaaatcaat 325  Q
    |||||||||||||||||||||    
T  50977376 tcacttttaaccaaaatcaat 50977356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 185 - 325
Target Start/End: Complemental strand, 43729034 - 43728894
Alignment:
Q  185 aaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaac 284  Q
    |||| |||||| ||||||  | ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||   |||| |||||||||    
T  43729034 aagggtaatttggtcatttaatattcaaaatcaattttgattcaaactatccaaacaacatcaactcataagaatcacttttaaataagtttatccaaac 43728935  T
Q  285 ataatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||||| |||||||| |||||||||||||| ||||||||||    
T  43728934 ataatcaattcacatccaactcacttttaagcaaaatcaat 43728894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 179 - 325
Target Start/End: Complemental strand, 4369965 - 4369819
Alignment:
Q  179 aattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtat 278  Q
    ||||| ||||||||||| ||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||    || |||     
T  4369965 aattaaaaggataatttggtcattacacatttaaaatcaattttgattcaacctatccaaacaacatcaactcataagaatcacttttaagtgagggtac 4369866  T
Q  279 ccaaacat-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||||||| |||| ||||||| ||||||||||||||||||||||||||    
T  4369865 ccaaacataaatcaattcaca-tcaactcacttttaaccaaaatcaat 4369819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 179 - 325
Target Start/End: Complemental strand, 42850382 - 42850235
Alignment:
Q  179 aattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtat 278  Q
    ||||| ||||||||||| |||| || ||||| |||||||||||||||  ||| ||| ||||||||||||||||||||||||||||| ||   ||||||||    
T  42850382 aattaaaaggataatttggtcaatacacattcaaaatcaattttgatgtaaaatatccaaacaacatcaactcataagaatcacttttaaggaagtgtat 42850283  T
Q  279 ccaaacat-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||||||| |||| |||||||| |||||||||||||||||||||||||    
T  42850282 ccaaacataaatcaattcacatccaactcacttttaaccaaaatcaat 42850235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 169 - 325
Target Start/End: Original strand, 12468166 - 12468322
Alignment:
Q  169 atttagttttaattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctag 268  Q
    |||| |||||||||| ||||||||||| ||||||  ||||| |||||||||||||||||||||||| ||||||| |||||||||||| |||||||| ||     
T  12468166 atttggttttaattaaaaggataatttggtcattgtacattcaaaatcaattttgattcaaactatccaaacaa-atcaactcataaaaatcacttttaa 12468264  T
Q  269 taaagtgtatccaaacat-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
     |||||||||||||| || |||| ||| ||||  ||||||||||||||||||||||||    
T  12468265 aaaagtgtatccaaatataaatcaatttacatcaaactcacttttaaccaaaatcaat 12468322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 179 - 325
Target Start/End: Original strand, 6166073 - 6166219
Alignment:
Q  179 aattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtat 278  Q
    ||||| |||| ||| || |||||||  ||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||| ||    |||||||    
T  6166073 aattaaaagggtaagttggtcattacccatttaaaatcaattttgattcaaactacccaaacaacatcaactcctaagaatcacttttaaatgagtgtat 6166172  T
Q  279 ccaaacataatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||||||||||| ||||| ||  ||||||||| ||||||||||||||    
T  6166173 ccaaacataatcaattcagatcaaactcacttctaaccaaaatcaat 6166219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 180 - 325
Target Start/End: Complemental strand, 40229632 - 40229486
Alignment:
Q  180 attataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatc 279  Q
    |||| ||||||| ||| ||||||| || || |||||||||||||||||||| ||| ||||||||||||||||| ||||||||| | ||  ||||||||||    
T  40229632 attaaaaggatagtttggtcattacacgttcaaaatcaattttgattcaaattatccaaacaacatcaactcagaagaatcacctgtaagaaagtgtatc 40229533  T
Q  280 caaacat-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    ||||||| |||| |||||| |  ||||||||||||||||||||||||    
T  40229532 caaacataaatcaattcacctcaaactcacttttaaccaaaatcaat 40229486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 179 - 325
Target Start/End: Complemental strand, 7826517 - 7826370
Alignment:
Q  179 aattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtat 278  Q
    ||||| |||||||| || ||||||| ||||||||||||||||||||||||| |||| ||||||||||||| ||||||||||||||| ||    || |||     
T  7826517 aattaaaaggataacttggtcattacacatttaaaatcaattttgattcaacctatccaaacaacatcaattcataagaatcacttttaagtgagggtac 7826418  T
Q  279 ccaaacat-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||||||| |||| ||||||||  | ||||||||||||||||||||||    
T  7826417 ccaaacataaatcaattcacatcaagctcacttttaaccaaaatcaat 7826370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 179 - 325
Target Start/End: Complemental strand, 11023492 - 11023346
Alignment:
Q  179 aattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtat 278  Q
    ||||| |||| ||| || |||||||  ||||||||||||||||||||||||||||  ||||||| |||||||| ||| ||| |||| || |  | |||||    
T  11023492 aattaaaagggtaagttggtcattacccatttaaaatcaattttgattcaaactacccaaacaatatcaactcgtaaaaattacttttaattgaatgtat 11023393  T
Q  279 ccaaacataatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||||||||||| |||||| |  ||||||||||||||||||||||||    
T  11023392 ccaaacataatcaattcacctaaaactcacttttaaccaaaatcaat 11023346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 211 - 325
Target Start/End: Original strand, 12247415 - 12247529
Alignment:
Q  211 aaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacataatctattcacattcaactcactt 310  Q
    |||||||||||||||||||| | | |||||||||||||||||||| |||||||| ||   |||||||||||||||||||  ||| |||| ||||||||||    
T  12247415 aaaatcaattttgattcaaattctccaaacaacatcaactcataaaaatcacttttaaacaagtgtatccaaacataattaatttacatccaactcactt 12247514  T
Q  311 ttaaccaaaatcaat 325  Q
    ||||||| |||||||    
T  12247515 ttaaccagaatcaat 12247529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 179 - 325
Target Start/End: Original strand, 5410603 - 5410749
Alignment:
Q  179 aattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttct-agtaaagtgta 277  Q
    ||||| ||||||| ||| ||||||| | ||| |||||||||| ||||||||||||| ||||||||||||| ||||||||||||||| | |||  ||||||    
T  5410603 aattaaaaggatagtttggtcattacatattcaaaatcaattatgattcaaactatccaaacaacatcaagtcataagaatcacttttaagt--agtgta 5410700  T
Q  278 tccaaacat-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    | ||||||| |||| ||| |||| |||||||||||||| ||||||||||    
T  5410701 ttcaaacataaatcaatttacatccaactcacttttaatcaaaatcaat 5410749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 120 - 321
Target Start/End: Original strand, 35535973 - 35536177
Alignment:
Q  120 tttatgattttagataagtttaaataattattttaattcagaatgaaatatttagtttta----attataaggataatttagtcattagacatttaaaat 215  Q
    ||||||||||||||||| || |||||||||| | || | |||||| || ||||||||  |    |||| |||| |||||| ||||||  |  || |||||    
T  35535973 tttatgattttagataatttgaaataattatctaaaatgagaatggaa-atttagttaaatacaattaaaagggtaatttggtcatttaatgttcaaaat 35536071  T
Q  216 caattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacataatctattcacattcaactcacttttaac 315  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||| ||    |||||||| |||||||| | |||||| |  || ||||||||||     
T  35536072 caattttgattcaaattatccaaacaacatcaactcataagaatcacttttaaacgagtgtatctaaacataaccaattcacgtcaaagtcacttttaat 35536171  T
Q  316 caaaat 321  Q
    ||||||    
T  35536172 caaaat 35536177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 198 - 325
Target Start/End: Original strand, 13931605 - 13931732
Alignment:
Q  198 tcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacataatctattcac 297  Q
    |||||| | ||| |||||||||||||||||||||||| |||||||||||||||  |||||||||  | ||    ||| ||||||||||||||| ||||||    
T  13931605 tcattacatattcaaaatcaattttgattcaaactatccaaacaacatcaacttgtaagaatcatgtttaagtgagtatatccaaacataatcaattcac 13931704  T
Q  298 attcaactcacttttaaccaaaatcaat 325  Q
    ||  |||||| |||||| ||||||||||    
T  13931705 atcaaactcatttttaaacaaaatcaat 13931732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 208 - 325
Target Start/End: Original strand, 25061218 - 25061336
Alignment:
Q  208 tttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttcta-gtaaagtgtatccaaacat-aatctattcacattcaact 305  Q
    ||||||||||||||||||||||| ||| |||||| |||||| | ||||||||||||| || || ||| |||||||||||| |||| ||| |  |||||||    
T  25061218 tttaaaatcaattttgattcaaattatccaaacatcatcaattgataagaatcacttttatgttaag-gtatccaaacataaatcaatttatgttcaact 25061316  T
Q  306 cacttttaaccaaaatcaat 325  Q
    ||||||||||||||||||||    
T  25061317 cacttttaaccaaaatcaat 25061336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 206 - 325
Target Start/End: Original strand, 15884216 - 15884337
Alignment:
Q  206 catttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttct-agtaaagtgtatccaaacataa-tctattcacattcaa 303  Q
    |||| ||||||||||||||| |||||||| |||||||||| || | |||| |||||||| | | |  | ||||||||||||||| || |||||||| |||    
T  15884216 cattcaaaatcaattttgatccaaactatccaaacaacatgaatttataaaaatcactttttactttattgtatccaaacataaatcaattcacatccaa 15884315  T
Q  304 ctcacttttaaccaaaatcaat 325  Q
    ||||||||||||||||||||||    
T  15884316 ctcacttttaaccaaaatcaat 15884337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 216 - 319
Target Start/End: Original strand, 9447533 - 9447636
Alignment:
Q  216 caattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacataatctattcacattcaactcacttttaac 315  Q
    ||||||| ||||||||||| ||||||||||||||||  ||||||||||| ||    ||| |||| |||||||||| ||||||||  ||||||||||||||    
T  9447533 caattttaattcaaactatccaaacaacatcaactcgaaagaatcacttttaaatgagtatatctaaacataatccattcacatcaaactcacttttaac 9447632  T
Q  316 caaa 319  Q
    ||||    
T  9447633 caaa 9447636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 179 - 261
Target Start/End: Original strand, 31933690 - 31933772
Alignment:
Q  179 aattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatca 261  Q
    ||||| ||||||||||| |||| || ||||| |||||||||||||||  ||| ||| ||||||||||||||||||||||||||    
T  31933690 aattaaaaggataatttggtcaatacacattcaaaatcaattttgatgtaaaatatccaaacaacatcaactcataagaatca 31933772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 200 - 325
Target Start/End: Original strand, 47123370 - 47123496
Alignment:
Q  200 attagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaac-ataatctattcaca 298  Q
    |||| |||| ||||| ||||||||||| ||  ||| ||||||||| ||||| ||||||||||||| ||   |||||||||||||| | |||| |||||||    
T  47123370 attatacatctaaaagcaattttgatttaatgtatccaaacaacaccaacttataagaatcacttttaacgaagtgtatccaaacaaaaatcaattcaca 47123469  T
Q  299 ttcaactcacttttaaccaaaatcaat 325  Q
    |  ||||||||||||| ||||||||||    
T  47123470 tctaactcacttttaatcaaaatcaat 47123496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 179 - 264
Target Start/End: Original strand, 36205154 - 36205239
Alignment:
Q  179 aattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcactt 264  Q
    ||||| |||| |||||| ||||||| ||||| |||||||||||||||||||||||| ||| ||||||  |||| ||||||||||||    
T  36205154 aattaaaaggttaatttggtcattaaacattcaaaatcaattttgattcaaactatccaagcaacattcactcgtaagaatcactt 36205239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 200 - 324
Target Start/End: Original strand, 50406114 - 50406239
Alignment:
Q  200 attagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaac-ataatctattcaca 298  Q
    |||| |||||||||| ||||||||||||||  ||| ||||||||| ||||| |||||||||| || ||   ||||| |||||||| | |||| |||||||    
T  50406114 attatacatttaaaaacaattttgattcaatgtatccaaacaacaacaacttataagaatcatttttaacgaagtgcatccaaacaaaaatcaattcaca 50406213  T
Q  299 ttcaactcacttttaaccaaaatcaa 324  Q
    |  ||||||||||||| |||||||||    
T  50406214 tctaactcacttttaatcaaaatcaa 50406239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 258
Target Start/End: Complemental strand, 11051474 - 11051395
Alignment:
Q  178 taattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaa 258  Q
    |||||| ||||||||||| ||||||| ||||| |||||||||||| ||||||||||| |||||||||| ||||| ||||||    
T  11051474 taattaaaaggataatttggtcattacacattcaaaatcaatttttattcaaactatccaaacaacat-aactcttaagaa 11051395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 11561739 - 11561806
Alignment:
Q  112 aaaatccatttatgattttagataagtttaaataattattttaattcagaatgaaatatttagtttta 179  Q
    |||||||| |||||||||||||||||||||||||||||| | || | |||| || |||||||||||||    
T  11561739 aaaatccaattatgattttagataagtttaaataattatctaaaataagaaagagatatttagtttta 11561806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 47
Target Start/End: Original strand, 45709605 - 45709644
Alignment:
Q  8 gggagacgtgagggagttattaaaaataactcaattgatc 47  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  45709605 gggagacgtgagggagttattaaaaataactcaattgatc 45709644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 6464367 - 6464413
Alignment:
Q  1 ggggagtgggagacgtgagggagttattaaaaataactcaattgatc 47  Q
    |||||||| || |||||||||||||||||||||||||||||||||||    
T  6464367 ggggagtgagatacgtgagggagttattaaaaataactcaattgatc 6464413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 220 - 321
Target Start/End: Original strand, 11561826 - 11561928
Alignment:
Q  220 tttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacataa-tctattcacattcaactcacttttaaccaa 318  Q
    ||||| ||||||||| ||||  | || |||||||||||||||||| ||  | ||| ||| |||| |||| || |||||||||||||||||||||||||||    
T  11561826 tttgagtcaaactatccaaattaaatgaactcataagaatcacttttaaaatagtatattcaaatataaatcaattcacattcaactcacttttaaccaa 11561925  T
Q  319 aat 321  Q
    |||    
T  11561926 aat 11561928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 217 - 325
Target Start/End: Complemental strand, 23628830 - 23628722
Alignment:
Q  217 aattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacataa-tctattcacattcaactcacttttaac 315  Q
    ||||||||||||||| |  |||||||||| || | |||||||||| || |||   | ||||||||||||||| || ||| ||||||||||||||||||      
T  23628830 aattttgattcaaaccacccaaacaacataaattgataagaatcaattttaggttattgtatccaaacataaatcaatt-acattcaactcacttttagt 23628732  T
Q  316 caaaatcaat 325  Q
    ||||||||||    
T  23628731 caaaatcaat 23628722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 275 - 325
Target Start/End: Original strand, 4347033 - 4347084
Alignment:
Q  275 gtatccaaacataa-tctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||||||||||||| ||  || ||||||||||||||||||||||||||||||    
T  4347033 gtatccaaacataaatcactttacattcaactcacttttaaccaaaatcaat 4347084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 211 - 325
Target Start/End: Original strand, 26058236 - 26058351
Alignment:
Q  211 aaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacat-aatctattcacattcaactcact 309  Q
    |||||||||||| || ||| |||| ||||||||||||| ||||| |||| |||| ||    |||| |||||||||| |||| ||| ||||  || |||||    
T  26058236 aaaatcaattttaatccaatctatccaaacaacatcaattcatatgaattacttttaaatgagtgcatccaaacataaatcaatttacatctaattcact 26058335  T
Q  310 tttaaccaaaatcaat 325  Q
    ||||| ||||||||||    
T  26058336 tttaatcaaaatcaat 26058351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 171
Target Start/End: Original strand, 4487411 - 4487464
Alignment:
Q  118 catttatgattttagataagtttaaataattattttaattcagaatgaaatatt 171  Q
    |||||||||||||||||||||| |||||||||| | || | ||||||| |||||    
T  4487411 catttatgattttagataagttgaaataattatctaaaatgagaatgagatatt 4487464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 150
Target Start/End: Complemental strand, 43729109 - 43729072
Alignment:
Q  113 aaatccatttatgattttagataagtttaaataattat 150  Q
    |||| |||||||||||||||||||||| ||||||||||    
T  43729109 aaattcatttatgattttagataagttcaaataattat 43729072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 325
Target Start/End: Complemental strand, 49243055 - 49242998
Alignment:
Q  269 taaagtgtatccaaacataa-tctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||| ||||| ||||||||| || |||||||| ||||||| |||||||||||||||||    
T  49243055 taaaatgtattcaaacataaatcaattcacatccaactcatttttaaccaaaatcaat 49242998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 297 - 325
Target Start/End: Original strand, 43134532 - 43134560
Alignment:
Q  297 cattcaactcacttttaaccaaaatcaat 325  Q
    |||||||||||||||||||||||||||||    
T  43134532 cattcaactcacttttaaccaaaatcaat 43134560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 245
Target Start/End: Complemental strand, 46033262 - 46033210
Alignment:
Q  193 tttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacat 245  Q
    |||||| |||| ||||| |||||||||||||||  ||||||| ||||||||||    
T  46033262 tttagtaattatacattcaaaatcaattttgataaaaactatccaaacaacat 46033210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 175; Significance: 3e-94; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 111 - 325
Target Start/End: Complemental strand, 6208292 - 6208078
Alignment:
Q  111 caaaatccatttatgattttagataagtttaaataattattttaattcagaatgaaatatttagttttaattataaggataatttagtcattagacattt 210  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||     
T  6208292 caaaattcatttatgattttagataagtttaaataattattttaattaagattgaaatatttagttttaattataaggataatttagtcattagacattc 6208193  T
Q  211 aaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacataatctattcacattcaactcactt 310  Q
    ||||| ||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  6208192 aaaattaattttgattcaaactatctaaacaacatcaactcataagaatcacttttagtaaagtgtatccaaacataatcaattcacattcaactcactt 6208093  T
Q  311 ttaaccaaaatcaat 325  Q
    |||| ||||||||||    
T  6208092 ttaatcaaaatcaat 6208078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 179 - 325
Target Start/End: Original strand, 16548078 - 16548225
Alignment:
Q  179 aattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtat 278  Q
    ||||| ||||||| ||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||| || | ||||||||| || ||||||||||    
T  16548078 aattaaaaggatagtttagtcattacacattcaaaatcaattttgattcaaactatccaaacaacatcaacccacatgaatcacttttaataaagtgtat 16548177  T
Q  279 ccaaacat-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||    
T  16548178 ccaaacataaatcaattcacattcaactcacttttaaccaaaatcaat 16548225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 179 - 325
Target Start/End: Original strand, 13739145 - 13739291
Alignment:
Q  179 aattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtat 278  Q
    ||||| ||||||||||| ||||||  ||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||   ||||||||    
T  13739145 aattacaaggataatttggtcattttacattcaaaattaattttgattcaaactatccaaacaacatcaactcataagaatcacttttaaacaagtgtat 13739244  T
Q  279 ccaaacataatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||||||||||| |||||| |  ||||||||||||||||||||||||    
T  13739245 ccaaacataatcaattcacctcaaactcacttttaaccaaaatcaat 13739291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 185 - 325
Target Start/End: Original strand, 13744651 - 13744791
Alignment:
Q  185 aaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaac 284  Q
    ||||||||||| ||||||  ||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||   ||||||||||||||    
T  13744651 aaggataatttggtcattttacattcaaaattaattttgattcaaactatccaaacaacatcaactcataagaatcacttttaaacaagtgtatccaaac 13744750  T
Q  285 ataatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||||| |||||| |  ||||||||||||||||||||||||    
T  13744751 ataatcaattcacctcaaactcacttttaaccaaaatcaat 13744791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 196 - 325
Target Start/End: Complemental strand, 17830143 - 17830013
Alignment:
Q  196 agtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacat-aatctatt 294  Q
    |||||||| ||||| |||||||||||||||||||||||| |||||||||||||| || |||||  ||||||| |||| |||| | |||||| |||| |||    
T  17830143 agtcattacacattcaaaatcaattttgattcaaactatccaaacaacatcaacccacaagaacgacttctaataaactgtaactaaacataaatcaatt 17830044  T
Q  295 cacattcaactcacttttaaccaaaatcaat 325  Q
    |||||||||||||||||||||||||||||||    
T  17830043 cacattcaactcacttttaaccaaaatcaat 17830013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 178 - 325
Target Start/End: Original strand, 10826029 - 10826177
Alignment:
Q  178 taattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgta 277  Q
    |||||| ||||||| ||| ||||||  | ||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||| ||   |||| ||    
T  10826029 taattaaaaggatagtttggtcattccatatttaaaattaattttgattcaaactatccaaacaaaatcaactcataagaatcacttttaaataagtata 10826128  T
Q  278 tccaaac-ataatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    ||||||| | |||| ||||| ||||||||||||||||||||||||||||    
T  10826129 tccaaacaaaaatcaattcaaattcaactcacttttaaccaaaatcaat 10826177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 190 - 325
Target Start/End: Complemental strand, 29409402 - 29409266
Alignment:
Q  190 taatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacat-aa 288  Q
    |||||| ||||||| ||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||| || ||  ||| ||||||||||||| ||    
T  29409402 taatttggtcattatacattcaaaattaattttgattcaaactatccaaacaacatcaactcataagaatcatttttaaaaaactgtatccaaacataaa 29409303  T
Q  289 tctattcacattcaactcacttttaaccaaaatcaat 325  Q
    || ||||||||  ||||||||||||| ||||||||||    
T  29409302 tcaattcacatcaaactcacttttaatcaaaatcaat 29409266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 180 - 325
Target Start/End: Complemental strand, 16442511 - 16442365
Alignment:
Q  180 attataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatc 279  Q
    |||| ||||||| ||| ||||||| ||||| |||||||||||| ||||||| ||| ||||||| ||||||||||| ||||||||| ||   |||||||||    
T  16442511 attaaaaggatagtttggtcattacacattcaaaatcaattttcattcaaattatccaaacaatatcaactcatatgaatcacttttaaataagtgtatc 16442412  T
Q  280 caaacat-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    ||||||| |||| ||||||||||||||||||| |||| |||||||||    
T  16442411 caaacataaatcaattcacattcaactcacttgtaactaaaatcaat 16442365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 179 - 325
Target Start/End: Original strand, 21455821 - 21455966
Alignment:
Q  179 aattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtat 278  Q
    ||||| || ||||||||| |||||| ||||||||||| |||||||||||||||||| |||||||||| ||||||| |||||||||| || | ||||||||    
T  21455821 aattaaaaagataatttaatcattacacatttaaaattaattttgattcaaactatgcaaacaacattaactcatgagaatcacttttaat-aagtgtat 21455919  T
Q  279 ccaaacataatctattcacattcaactcacttttaaccaaaatcaat 325  Q
     |||||| |||  |||||||| ||||| ||||||||| |||||||||    
T  21455920 acaaacacaattgattcacatccaacttacttttaactaaaatcaat 21455966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 185 - 324
Target Start/End: Original strand, 7215520 - 7215658
Alignment:
Q  185 aaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaac 284  Q
    |||||||||||| |||||| | ||||||||| |||||||||||||  ||| |||||||||| ||||||| |||||||||| || | |||||||| |||||    
T  7215520 aaggataatttaatcattacatatttaaaattaattttgattcaatttatgcaaacaacattaactcatgagaatcacttttaat-aagtgtatacaaac 7215618  T
Q  285 ataatctattcacattcaactcacttttaaccaaaatcaa 324  Q
    |||||  |||||| | ||| ||||||||||| ||||||||    
T  7215619 ataattgattcacgtccaattcacttttaactaaaatcaa 7215658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 113 - 321
Target Start/End: Original strand, 31132334 - 31132545
Alignment:
Q  113 aaatccatttatgattttagataagtttaaataattattttaattcagaatgaaatatttagtttta----attataaggataatttagtcattagacat 208  Q
    |||||||||  | |||||||||||||| |||||||||| | || | ||||| ||| ||||||||  |    |||| |||| |||||| ||||||  |  |    
T  31132334 aaatccattattaattttagataagttgaaataattatctaaaatgagaataaaa-atttagttaaagacaattaaaagggtaatttggtcatttaaagt 31132432  T
Q  209 ttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacataatctattcacattcaactcac 308  Q
    | |||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||   ||||||||||||| ||||   ||| |||| |||||||     
T  31132433 tcaaaatcaattttgattcaaactatccaaacaacatcaacccataagaatcacttttaaataagtgtatccaaaaataacgaattaacatccaactcat 31132532  T
Q  309 ttttaaccaaaat 321  Q
    ||||| |||||||    
T  31132533 ttttagccaaaat 31132545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 179 - 325
Target Start/End: Complemental strand, 33899167 - 33899020
Alignment:
Q  179 aattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtat 278  Q
    ||||| ||||||| ||| ||||||| ||||| |||||||||||||||| |||| || ||||||  || |||||||||||||||||| ||    |||||||    
T  33899167 aattaaaaggatattttggtcattacacattcaaaatcaattttgatttaaaccatccaaacattattaactcataagaatcacttttacattagtgtat 33899068  T
Q  279 ccaaacat-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||||||| |||| ||||| ||  ||||||||||||| ||||||||||    
T  33899067 ccaaacataaatcaattcatatcaaactcacttttaatcaaaatcaat 33899020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 206 - 325
Target Start/End: Complemental strand, 1312574 - 1312454
Alignment:
Q  206 catttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttcta-gtaaagtgtatccaaacataa-tctattcacattcaa 303  Q
    |||| |||||||||||||  ||||||||| |||||||||| || |  ||||||||| ||||| || || ||||||| ||||||| || |||| |||||||    
T  1312574 cattcaaaatcaattttgggtcaaactatccaaacaacattaatttttaagaatcaattctaagtcaa-tgtatccgaacataaatcaattcgcattcaa 1312476  T
Q  304 ctcacttttaaccaaaatcaat 325  Q
    ||||||||||||||||||||||    
T  1312475 ctcacttttaaccaaaatcaat 1312454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 211 - 325
Target Start/End: Original strand, 699529 - 699642
Alignment:
Q  211 aaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacat-aatctattcacattcaactcact 309  Q
    |||||| ||||||||||||||||| ||| |||||| |||| |||||||| |||| |||||||||| |||||||||| |||| ||||  || ||||||||     
T  699529 aaaatcgattttgattcaaactatccaa-caacattaacttataagaattacttttagtaaagtgcatccaaacataaatcaattcttatccaactcac- 699626  T
Q  310 tttaaccaaaatcaat 325  Q
    |||||| |||||||||    
T  699627 tttaactaaaatcaat 699642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 47
Target Start/End: Complemental strand, 6208433 - 6208394
Alignment:
Q  8 gggagacgtgagggagttattaaaaataactcaattgatc 47  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  6208433 gggagacgtgagggagttattaaaaataactcaattgatc 6208394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 211 - 325
Target Start/End: Complemental strand, 21255008 - 21254894
Alignment:
Q  211 aaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacat-aatctattcacattcaactcact 309  Q
    |||| ||||||||||||||||||   ||||||||| || | |||||||||| || |||   | ||||||||||||| |||| ||| ||||||||||||||    
T  21255008 aaaagcaattttgattcaaactaccgaaacaacataaattgataagaatcaattttaggttattgtatccaaacataaatcaatt-acattcaactcact 21254910  T
Q  310 tttaaccaaaatcaat 325  Q
    ||||| |||| |||||    
T  21254909 tttaatcaaattcaat 21254894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 171; Significance: 8e-92; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 171; E-Value: 8e-92
Query Start/End: Original strand, 111 - 325
Target Start/End: Complemental strand, 44939644 - 44939431
Alignment:
Q  111 caaaatccatttatgattttagataagtttaaataattattttaattcagaatgaaatatttagttttaattataaggataatttagtcattagacattt 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||     
T  44939644 caaaatccatttatgattttagataagtttaaataattattttaattaagattgaaatatttagttttaattataaggataatttagtcattagacattc 44939545  T
Q  211 aaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacataatctattcacattcaactcactt 310  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||| |||||||||||||    
T  44939544 aaaattaattttgattaaaactattcaaacaacatcaactcataagaatcacttatagtaaa-tgtatccaaacataatcaattcatattcaactcactt 44939446  T
Q  311 ttaaccaaaatcaat 325  Q
    |||| ||||||||||    
T  44939445 ttaatcaaaatcaat 44939431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 112 - 325
Target Start/End: Complemental strand, 8424958 - 8424745
Alignment:
Q  112 aaaatccatttatgattttagataagtttaaataattattttaattcagaatgaaatatttagttttaattataaggataatttagtcattagacattta 211  Q
    ||||||||||| |||||||||||||||| ||||||||||||||| | ||||| | ||||||||||||||||  ||||||||||||||||||| ||| | |    
T  8424958 aaaatccatttttgattttagataagttcaaataattattttaagtaagaataagatatttagttttaatttgaaggataatttagtcattacacactca 8424859  T
Q  212 aaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacataatctattcacattcaactcacttt 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||||| |||||||||||||    
T  8424858 aaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctattgaagtgtatccaaacataatcaattcacgttcaactcacttt 8424759  T
Q  312 taaccaaaatcaat 325  Q
    ||||||||||||||    
T  8424758 taaccaaaatcaat 8424745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 112 - 325
Target Start/End: Original strand, 35425206 - 35425419
Alignment:
Q  112 aaaatccatttatgattttagataagtttaaataattattttaattcagaatgaaatatttagttttaattataaggataatttagtcattagacattta 211  Q
    ||||||||||||| |||||||||||||| |||||| |||||||| | ||||| ||||||||||||||||| | ||||||||||||||||||| ||||| |    
T  35425206 aaaatccatttataattttagataagttcaaataaatattttaagtaagaataaaatatttagttttaatcaaaaggataatttagtcattacacattca 35425305  T
Q  212 aaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacataatctattcacattcaactcacttt 311  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||    
T  35425306 aaatcaattttgattcaaactatccaaacaatatcaactcataagaatcacttctgttaaagtgtatccaaacataatcaattcacattcaactcacttt 35425405  T
Q  312 taaccaaaatcaat 325  Q
    ||| ||||||||||    
T  35425406 taatcaaaatcaat 35425419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 112 - 325
Target Start/End: Complemental strand, 30811760 - 30811547
Alignment:
Q  112 aaaatccatttatgattttagataagtttaaataattattttaattcagaatgaaatatttagttttaattataaggataatttagtcattagacattta 211  Q
    ||||||||||||| |||||||||||||| |||||| |||||||| | ||||||||||||||||||||||||| ||| |||||||| |||||| ||||| |    
T  30811760 aaaatccatttataattttagataagttcaaataaatattttaagtaagaatgaaatatttagttttaattaaaagaataatttaatcattacacattca 30811661  T
Q  212 aaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacataatctattcacattcaactcacttt 311  Q
    ||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||    
T  30811660 aaatcaattttgattcaaactatccaaacaatatcaagtcataagaatcacttctgttaaagtgtatccaaacataatcaattcacattcaactcacttt 30811561  T
Q  312 taaccaaaatcaat 325  Q
    ||| ||||||||||    
T  30811560 taatcaaaatcaat 30811547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 180 - 325
Target Start/End: Complemental strand, 48189602 - 48189457
Alignment:
Q  180 attataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatc 279  Q
    |||| ||||||||||||||||||| ||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||  ||| |||||||    
T  48189602 attagaaggataatttagtcattatacattcaaaatcaattttaattcaaactatccaaacaacatcaactcataagaatcacttctgttaacgtgtatc 48189503  T
Q  280 caaacataatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    ||||||||||| ||| ||||||||||||||||||| ||||||||||    
T  48189502 caaacataatcaatttacattcaactcacttttaatcaaaatcaat 48189457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 185 - 325
Target Start/End: Complemental strand, 38172463 - 38172322
Alignment:
Q  185 aaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaac 284  Q
    ||||||| ||| ||||||| ||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  38172463 aaggatagtttggtcattacacattcaaaatcaattttaattcaaactatccaaacaacatcaactcataagaatcacttctattaaagtgtatccaaac 38172364  T
Q  285 at-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    || |||| |||||||| | |||||||||||||||||||||||    
T  38172363 ataaatcaattcacatcccactcacttttaaccaaaatcaat 38172322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 112 - 325
Target Start/End: Original strand, 42318196 - 42318415
Alignment:
Q  112 aaaatccatttatgattttagataagtttaaataattattttaattcagaatgaaatatttagttttaa------ttataaggataatttagtcattaga 205  Q
    |||||||||||||||||||||||||||| |||||| ||| | || | ||||||  || |||||||||||      ||| ||||||||||| ||||||  |    
T  42318196 aaaatccatttatgattttagataagttcaaataagtatctaaaataagaatgggatgtttagttttaaatacaattaaaaggataattttgtcatttta 42318295  T
Q  206 catttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacataatctattcacattcaact 305  Q
    |||| |||||||||||||||||||||||| ||||| | |||||||||||||||||||||  |   |||||||||||||||||||| |||||| |  ||||    
T  42318296 cattcaaaatcaattttgattcaaactatccaaacgaaatcaactcataagaatcactttcaaacaagtgtatccaaacataatcaattcacctcaaact 42318395  T
Q  306 cacttttaaccaaaatcaat 325  Q
    ||||||||||||||||||||    
T  42318396 cacttttaaccaaaatcaat 42318415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 179 - 325
Target Start/End: Original strand, 10334077 - 10334224
Alignment:
Q  179 aattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtat 278  Q
    ||||| ||||||| ||| ||||||| | ||| |||||||||||||||||||||||| |||||||| ||||||||||||||| |||| |||||||||||||    
T  10334077 aattaaaaggatagtttggtcattataaattcaaaatcaattttgattcaaactatccaaacaacgtcaactcataagaattacttttagtaaagtgtat 10334176  T
Q  279 ccaaacat-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||||||| |||| ||||| |||||||| |||||||||||||||||||    
T  10334177 ccaaacataaatcaattcatattcaactgacttttaaccaaaatcaat 10334224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 112 - 325
Target Start/End: Complemental strand, 38125676 - 38125457
Alignment:
Q  112 aaaatccatttatgattttagataagtttaaataattattttaattcagaatgaaatatttagttttaa------ttataaggataatttagtcattaga 205  Q
    |||||||||||||||||||||||||||| |||||| ||| | || | ||||||  || |||||||||||      ||| ||||||||||| ||||||  |    
T  38125676 aaaatccatttatgattttagataagttcaaataagtatctaaaataagaatgggatgtttagttttaaatacaattaaaaggataattttgtcatttta 38125577  T
Q  206 catttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacataatctattcacattcaact 305  Q
    |||| ||||| |||||||||||||||||| ||||| | |||||||||||||||||||||  |   |||||||||||||||||||| |||||| |  |||     
T  38125576 cattcaaaattaattttgattcaaactatccaaacgaaatcaactcataagaatcactttcaaacaagtgtatccaaacataatcaattcacctcaaacc 38125477  T
Q  306 cacttttaaccaaaatcaat 325  Q
    ||||||||||||||||||||    
T  38125476 cacttttaaccaaaatcaat 38125457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 179 - 325
Target Start/End: Complemental strand, 16246256 - 16246109
Alignment:
Q  179 aattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtat 278  Q
    ||||| ||||||| |||  |||||| ||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| |||||||| |    
T  16246256 aattaaaaggatagtttgatcattacacattcaaaatcaattttgattcaaactatccaaacaacatcaactcctaagaatcacttctattaaagtgttt 16246157  T
Q  279 ccaaacat-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||||||| |||| ||| ||||  |||||||||||||| |||||||||    
T  16246156 ccaaacataaatcaatttacatctaactcacttttaactaaaatcaat 16246109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 112 - 325
Target Start/End: Complemental strand, 15511610 - 15511391
Alignment:
Q  112 aaaatccatttatgattttagataagtttaaataattattttaattcagaatgaaatatttagttttaa------ttataaggataatttagtcattaga 205  Q
    ||||| ||||||||||||||||||| || |||| ||||| | |||| ||||||| ||||||| ||||||      ||| |||  |||||| |||||||      
T  15511610 aaaattcatttatgattttagataaattcaaatgattatctaaattaagaatgagatatttaattttaaacacaattaaaagagtaatttcgtcattacg 15511511  T
Q  206 catttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacat-aatctattcacattcaac 304  Q
    |||| |||||||||||| ||||||||||| ||||||| |||||||||||| |||||||| || | ||| |||||||||||| |||| |||||||  ||||    
T  15511510 cattcaaaatcaatttttattcaaactatccaaacaatatcaactcataaaaatcacttttaat-aagcgtatccaaacataaatcaattcacacccaac 15511412  T
Q  305 tcacttttaaccaaaatcaat 325  Q
    |||||||||||||||||||||    
T  15511411 tcacttttaaccaaaatcaat 15511391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 169 - 325
Target Start/End: Original strand, 53179778 - 53179934
Alignment:
Q  169 atttagttttaattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctag 268  Q
    |||| |||||||||| ||||||||||| ||||||  ||||| |||||||||||||||| ||||||| ||||||| |||||||||||| |||||||| ||     
T  53179778 atttggttttaattaaaaggataatttggtcattgtacattcaaaatcaattttgatttaaactatccaaacaa-atcaactcataaaaatcacttttaa 53179876  T
Q  269 taaagtgtatccaaacat-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
     ||||||||||||||||| |||| ||| ||||  ||||||||||||||||||||||||    
T  53179877 aaaagtgtatccaaacataaatcaatttacatcaaactcacttttaaccaaaatcaat 53179934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 206 - 325
Target Start/End: Original strand, 53074869 - 53074988
Alignment:
Q  206 catttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacataatctattcacattcaact 305  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||    ||||||||||||||||||| |||||| |  ||||    
T  53074869 catttaaaatcaattttgattcaaactatccaaacaacatccactcataagaatcacttttaagtgagtgtatccaaacataatcaattcacctcaaact 53074968  T
Q  306 cacttttaaccaaaatcaat 325  Q
    ||||||||||||||||||||    
T  53074969 cacttttaaccaaaatcaat 53074988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 185 - 325
Target Start/End: Complemental strand, 10853423 - 10853282
Alignment:
Q  185 aaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaac 284  Q
    ||||||||||| |||| || ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||    ||| |||||||||    
T  10853423 aaggataatttggtcaatacacattcaaaatcaattttgattcaaactatccaaacaacatcaactcataagaatcacttttaagtgagtatatccaaac 10853324  T
Q  285 at-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    || |||| ||| | ||| ||||||||||||||||||||||||    
T  10853323 ataaatcaatttatattaaactcacttttaaccaaaatcaat 10853282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 179 - 319
Target Start/End: Original strand, 20813085 - 20813226
Alignment:
Q  179 aattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtat 278  Q
    ||||| ||||||| ||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |    |||| |||    
T  20813085 aattaaaaggatagtttagtcattacacattcaaaatcaattttgattcaaactatccaaacaacatcaactcataagaatcacttttgaataagtatat 20813184  T
Q  279 ccaaac-ataatctattcacattcaactcacttttaaccaaa 319  Q
    |||||| | |||| ||||| || |||||||||||||||||||    
T  20813185 ccaaacaaaaatcaattcaaatccaactcacttttaaccaaa 20813226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 112 - 325
Target Start/End: Original strand, 38340673 - 38340891
Alignment:
Q  112 aaaatccatttatgattttagataagtttaaataattattttaattcagaatgaaatatttagttttaattataa------ggataatttagtcattaga 205  Q
    |||||||| ||||||||| ||||||||| |||||||||| | || | |||| || |||||||||||||  |||||      ||||||||| |||| || |    
T  38340673 aaaatccaattatgattt-agataagttcaaataattatctaaaataagaaagagatatttagttttatatataataaaaaggataatttggtcactaca 38340771  T
Q  206 catttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacat-aatctattcacattcaac 304  Q
    ||||||||||||||||| ||||||||||| |||||||| |||||| |||| ||| |||| || | |||  ||||||||||| |||| |||||||| ||||    
T  38340772 catttaaaatcaatttttattcaaactatccaaacaacgtcaacttataaaaattacttttaat-aagcatatccaaacataaatcaattcacatccaac 38340870  T
Q  305 tcacttttaaccaaaatcaat 325  Q
    |||||||||||||||||||||    
T  38340871 tcacttttaaccaaaatcaat 38340891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 179 - 325
Target Start/End: Complemental strand, 52966971 - 52966824
Alignment:
Q  179 aattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtat 278  Q
    ||||| ||||||||||| ||||||| ||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||| ||    || |||     
T  52966971 aattaaaaggataatttggtcattacacatttaaaatcaattttgattcaacctatctaaacaacatcaactcataagaatcacttttaagtgagggtac 52966872  T
Q  279 ccaaacat-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||||||| |||| ||||||||  || |||||||||||||||||||||    
T  52966871 ccaaacataaatcaattcacatcaaagtcacttttaaccaaaatcaat 52966824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 179 - 325
Target Start/End: Original strand, 23496263 - 23496403
Alignment:
Q  179 aattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtat 278  Q
    ||||| || |||| ||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||| |  ||||||||||| ||       ||||    
T  23496263 aattaaaatgatagtttagtcattatacattcaaaatcaattttgattcaaactatccaaacaacatcaacccgcaagaatcactttta-------gtat 23496355  T
Q  279 ccaaacat-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||    
T  23496356 ccaaacataaatcaattcacattcaactcacttttaaccaaaatcaat 23496403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 179 - 325
Target Start/End: Original strand, 3348182 - 3348329
Alignment:
Q  179 aattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtat 278  Q
    ||||| ||||||||||| |||| || ||||| |||||||||||||||  ||| ||| |||||||||||||||||||||||| |||| ||   ||||||||    
T  3348182 aattaaaaggataatttggtcaatacacattcaaaatcaattttgatataaaatatccaaacaacatcaactcataagaattacttttaaggaagtgtat 3348281  T
Q  279 ccaaacat-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||||||| |||| ||| |||| |||||||||| ||||||||||||||    
T  3348282 ccaaacataaatcaatttacatccaactcacttctaaccaaaatcaat 3348329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 180 - 325
Target Start/End: Original strand, 50664699 - 50664844
Alignment:
Q  180 attataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatc 279  Q
    |||| |||||||||||  |||||| ||||| |||||||||||| ||| |||||||  ||||||||| ||||| |||||||||||||||     |||||||    
T  50664699 attaaaaggataatttgatcattacacattcaaaatcaattttaatttaaactatctaaacaacat-aactcttaagaatcacttctaagtgtgtgtatc 50664797  T
Q  280 caaacataa-tctattcacattcaactcacttttaaccaaaatcaat 325  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||    
T  50664798 caaacataaatcaattcacattcaactcacttttaaccaaaatcaat 50664844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 205 - 325
Target Start/End: Original strand, 26519629 - 26519750
Alignment:
Q  205 acatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacat-aatctattcacattcaa 303  Q
    ||||||||||||||||||| |||||||||| ||||||| ||||||| |||| |||||||| || |  ||||||||||||||| |||| ||||||||||||    
T  26519629 acatttaaaatcaattttgtttcaaactatccaaacaatatcaactaataaaaatcacttttaattgagtgtatccaaacataaatcaattcacattcaa 26519728  T
Q  304 ctcacttttaaccaaaatcaat 325  Q
    ||||||||| | ||||||||||    
T  26519729 ctcactttttagcaaaatcaat 26519750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 179 - 325
Target Start/End: Original strand, 31084147 - 31084293
Alignment:
Q  179 aattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtat 278  Q
    ||||| || |||| ||| ||||||| | ||| |||||||||| ||||||||||||| |||| || ||||| ||||||||||||||| ||   ||||||||    
T  31084147 aattaaaatgatagtttggtcattacatattcaaaatcaattatgattcaaactatccaaataatatcaagtcataagaatcactttta-agaagtgtat 31084245  T
Q  279 ccaaacat-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||||||| |||| ||||||||||||||||||||||| ||||||||||    
T  31084246 ccaaacataaatcaattcacattcaactcacttttaatcaaaatcaat 31084293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 179 - 325
Target Start/End: Original strand, 44224701 - 44224848
Alignment:
Q  179 aattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtat 278  Q
    ||||| ||||||||||| ||||||  ||||| |||||||||||||| | ||| ||| ||||||||||||||||||||||||||||| ||    |||||||    
T  44224701 aattaaaaggataatttggtcattgcacattcaaaatcaattttgactaaaattatccaaacaacatcaactcataagaatcacttttaagtgagtgtat 44224800  T
Q  279 ccaaacat-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||||||| |||| ||||| ||  |||||||||||||||| |||||||    
T  44224801 ccaaacataaatcaattcatatcaaactcacttttaaccataatcaat 44224848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 189 - 325
Target Start/End: Original strand, 21224939 - 21225076
Alignment:
Q  189 ataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacata- 287  Q
    ||||||| ||||||| ||| | | ||||||||||||||||||||||  |||| |||||||||| |||||||| ||| ||  ||||||||||||||||||     
T  21224939 ataatttggtcattatacactcataatcaattttgattcaaactatcaaaacgacatcaactcgtaagaatcgcttttaagaaagtgtatccaaacatat 21225038  T
Q  288 atctattcacattcaactcacttttaaccaaaatcaat 325  Q
    ||| ||| ||||  ||||||||||||||||||||||||    
T  21225039 atcaatttacatcaaactcacttttaaccaaaatcaat 21225076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 211 - 325
Target Start/End: Complemental strand, 23207196 - 23207083
Alignment:
Q  211 aaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacataa-tctattcacattcaactcact 309  Q
    ||||| |||||||||||||||||| |||||||||||||||||||| |||||||| ||  ||||||||||||||||||| || ||||||||  |||||| |    
T  23207196 aaaattaattttgattcaaactat-caaacaacatcaactcataa-aatcacttgtaaaaaagtgtatccaaacataaatcaattcacatcaaactcatt 23207099  T
Q  310 tttaaccaaaatcaat 325  Q
    ||||||||||||||||    
T  23207098 tttaaccaaaatcaat 23207083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 185 - 288
Target Start/End: Complemental strand, 31619043 - 31618940
Alignment:
Q  185 aaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaac 284  Q
    |||||||| ||  |||||| ||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||    || ||||||||||    
T  31619043 aaggataagttgatcattatacattcaaaattaattttgattcaaactatccaaacaacatcaactcataagaatcacttctaagtgagagtatccaaac 31618944  T
Q  285 ataa 288  Q
    ||||    
T  31618943 ataa 31618940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 159 - 321
Target Start/End: Original strand, 25847946 - 25848114
Alignment:
Q  159 agaatgaaatatttagtttt------aattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactca 252  Q
    ||||||||||||||||||||      ||||  ||| ||||||| ||||||| |||||||||||||||||| |||| |||||| |||||||||  ||||||    
T  25847946 agaatgaaatatttagtttttaatacaatttaaagtataatttggtcattacacatttaaaatcaatttttattc-aactatccaaacaacacaaactca 25848044  T
Q  253 taagaatcacttct-agtaaagtgtatccaaacat-aatctattcacattcaactcacttttaaccaaaat 321  Q
    ||||||||| || | ||| ||| |||||||||||| |||| ||||| ||| ||||||||||| ||||||||    
T  25848045 taagaatcatttttaagtgaag-gtatccaaacataaatcaattcatattaaactcactttttaccaaaat 25848114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 193 - 325
Target Start/End: Original strand, 34561061 - 34561194
Alignment:
Q  193 tttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttcta-gtaaagtgtatccaaacataa-tc 290  Q
    |||||| ||||  |||| |||||||||||||  ||||||||| ||| |||||| || |  ||||||||| ||||| || || ||||||||||||||| ||    
T  34561061 tttagtaattatgcattcaaaatcaattttgggtcaaactatccaaccaacattaatttttaagaatcaattctaagtcaa-tgtatccaaacataaatc 34561159  T
Q  291 tattcacattcaactcacttttaaccaaaatcaat 325  Q
     |||| |||||||||||||||||||||||||||||    
T  34561160 aattcgcattcaactcacttttaaccaaaatcaat 34561194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 200 - 325
Target Start/End: Original strand, 42475669 - 42475795
Alignment:
Q  200 attagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaac-ataatctattcaca 298  Q
    |||| |||| ||||| ||||||||||||||  ||| ||||||||| ||| ||||||||||| ||| ||  ||||||||| ||||| | |||| |||||||    
T  42475669 attatacatctaaaagcaattttgattcaatgtatccaaacaacaacaattcataagaatcgcttttaacaaagtgtattcaaacaaaaatcaattcaca 42475768  T
Q  299 ttcaactcacttttaaccaaaatcaat 325  Q
    |  ||||||||||||| ||||||||||    
T  42475769 tctaactcacttttaatcaaaatcaat 42475795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 179 - 325
Target Start/End: Original strand, 35930677 - 35930824
Alignment:
Q  179 aattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtat 278  Q
    ||||| || |||| ||| ||||||| ||||| |||||||||||||||| |||| || ||||||  |||||||||||||||| |||| ||    |||||||    
T  35930677 aattaaaatgatattttggtcattacacattcaaaatcaattttgatttaaaccatccaaacattatcaactcataagaatgacttatacattagtgtat 35930776  T
Q  279 ccaaacat-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||| ||| |||| ||||| ||  |||||||||||||  |||||||||    
T  35930777 ccaagcataaatcaattcatatcaaactcacttttaataaaaatcaat 35930824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 325
Target Start/End: Complemental strand, 30810078 - 30809960
Alignment:
Q  208 tttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacat-aatctattcacattcaactc 306  Q
    |||||||  |||||||||||||||||| |||||| |||||| | ||||||||||||| ||   ||| |||  ||| ||| |||| ||||||||| |||||    
T  30810078 tttaaaagtaattttgattcaaactatccaaacatcatcaatttataagaatcacttttaagtaagcgtaatcaatcataaatcaattcacatttaactc 30809979  T
Q  307 acttttaaccaaaatcaat 325  Q
    ||||||||||||| |||||    
T  30809978 acttttaaccaaactcaat 30809960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 179 - 264
Target Start/End: Original strand, 22736920 - 22737005
Alignment:
Q  179 aattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcactt 264  Q
    ||||| ||| |||||||  |||||| ||||| ||||||||||||||||||||| || | |||||||| ||||||||| ||||||||    
T  22736920 aattaaaagtataatttgttcattacacattcaaaatcaattttgattcaaaccatcccaacaacattaactcataataatcactt 22737005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 272 - 325
Target Start/End: Original strand, 55154534 - 55154587
Alignment:
Q  272 agtgtatccaaacataatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||||||| |||||||||| |||||||||||||||||||||||| |||||||||    
T  55154534 agtgtatctaaacataatcaattcacattcaactcacttttaactaaaatcaat 55154587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 47
Target Start/End: Complemental strand, 44939778 - 44939739
Alignment:
Q  8 gggagacgtgagggagttattaaaaataactcaattgatc 47  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  44939778 gggagacgtgagggagttattaaaaataactcaattgatc 44939739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 211 - 325
Target Start/End: Complemental strand, 45423898 - 45423784
Alignment:
Q  211 aaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacataatctattcacattcaactcactt 310  Q
    ||||||||||||||||||| |||| |||||||||| || | ||||||||||||| || |  | | ||||||||||||| | | | |  ||||||||||||    
T  45423898 aaaatcaattttgattcaagctatccaaacaacatgaattgataagaatcacttttactttaatatatccaaacataaaccaattaagttcaactcactt 45423799  T
Q  311 ttaaccaaaatcaat 325  Q
    |||  ||||||||||    
T  45423798 ttaggcaaaatcaat 45423784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 325
Target Start/End: Complemental strand, 49526817 - 49526684
Alignment:
Q  193 tttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacat-aatct 291  Q
    |||||| |||| ||||| |||| ||||||||||| | |||||| ||||||||| || | |||||||||| || ||    | ||||||||||||| ||||     
T  49526817 tttagtaattacacattcaaaagcaattttgatttagactatttaaacaacataaattgataagaatcaattttacatgaatgtatccaaacataaatca 49526718  T
Q  292 attcacattcaactcacttttaaccaaaatcaat 325  Q
    ||| ||| |||| |||||||||| ||||||||||    
T  49526717 atttacaatcaattcacttttaatcaaaatcaat 49526684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 325
Target Start/End: Original strand, 4984592 - 4984667
Alignment:
Q  251 cataagaatcacttctagtaaagtgtatccaaacataa-tctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||||||||||||| ||    ||||||||||||||||| || ||||||||  ||||||||||||||||||||||||    
T  4984592 cataagaatcacttttaaacgagtgtatccaaacataaatcaattcacatctaactcacttttaaccaaaatcaat 4984667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 263 - 325
Target Start/End: Original strand, 19877440 - 19877503
Alignment:
Q  263 ttctagtaaagtgtatccaaacataa-tctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||||||||||| |||| |||||||| || ||| |||| |||||||||||||||||||||||||    
T  19877440 ttctagtaaagtatatctaaacataaatcaatttacatccaactcacttttaaccaaaatcaat 19877503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 179 - 260
Target Start/End: Original strand, 14959658 - 14959739
Alignment:
Q  179 aattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatc 260  Q
    ||||| || ||||||||| || ||| ||||| |||||||| |||||||||||  ||  ||||||||||||||||||| ||||    
T  14959658 aattaaaaagataatttaatcgttacacattcaaaatcaagtttgattcaaatcatctaaacaacatcaactcataaaaatc 14959739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 32357482 - 32357535
Alignment:
Q  211 aaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcactt 264  Q
    |||||||||||| ||||||| ||  |||||||||||||| ||||||||||||||    
T  32357482 aaaatcaattttaattcaaagtacccaaacaacatcaacacataagaatcactt 32357535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 200 - 245
Target Start/End: Complemental strand, 37698530 - 37698485
Alignment:
Q  200 attagacatttaaaatcaattttgattcaaactattcaaacaacat 245  Q
    |||| |||| ||||||||||||||||||||||||| ||||||||||    
T  37698530 attatacatgtaaaatcaattttgattcaaactatccaaacaacat 37698485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 213 - 250
Target Start/End: Complemental strand, 55087630 - 55087593
Alignment:
Q  213 aatcaattttgattcaaactattcaaacaacatcaact 250  Q
    |||||||||||||||||||||| |||||||||||||||    
T  55087630 aatcaattttgattcaaactatccaaacaacatcaact 55087593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 275 - 325
Target Start/End: Original strand, 7012675 - 7012726
Alignment:
Q  275 gtatccaaacataa-tctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||||||||||||| ||  || ||||||||||||||||||||||||||||||    
T  7012675 gtatccaaacataaatcactttacattcaactcacttttaaccaaaatcaat 7012726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 325
Target Start/End: Complemental strand, 49330428 - 49330378
Alignment:
Q  276 tatccaaacataatcta-ttcacattcaactcacttttaaccaaaatcaat 325  Q
    |||||||||||||| || ||||| ||||||| |||||||||||||||||||    
T  49330428 tatccaaacataatttagttcactttcaactaacttttaaccaaaatcaat 49330378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 325
Target Start/End: Complemental strand, 10852757 - 10852728
Alignment:
Q  296 acattcaactcacttttaaccaaaatcaat 325  Q
    ||||||||||||||||||||||||||||||    
T  10852757 acattcaactcacttttaaccaaaatcaat 10852728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 44610363 - 44610311
Alignment:
Q  193 tttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatc 246  Q
    |||||| |||| ||||| |||||||||||||| ||||||||| |||||||||||    
T  44610363 tttagtaattatacattcaaaatcaattttga-tcaaactatccaaacaacatc 44610311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 30811277 - 30811329
Alignment:
Q  193 tttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacat 245  Q
    |||||| |||| ||||| |||||||||||||||  ||||||| ||||||||||    
T  30811277 tttagtaattatacattcaaaatcaattttgatcaaaactatccaaacaacat 30811329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 154; Significance: 1e-81; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 112 - 325
Target Start/End: Complemental strand, 29351 - 29138
Alignment:
Q  112 aaaatccatttatgattttagataagtttaaataattattttaattcagaatgaaatatttagttttaattataaggataatttagtcattagacattta 211  Q
    |||||||||| ||||||||||||||||| ||||||||||||||| |  |||||| ||||||||||||||||  ||||||||||||||||||| ||||| |    
T  29351 aaaatccattaatgattttagataagttcaaataattattttaagtaggaatgagatatttagttttaatttgaaggataatttagtcattacacattca 29252  T
Q  212 aaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacataatctattcacattcaactcacttt 311  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  29251 aaatcaattttgattcaaactatccaaacaacatcaattcataagaataacttctattaaagtgtatccaaacataatcaattcacattcaactcacttt 29152  T
Q  312 taaccaaaatcaat 325  Q
    ||||||||||||||    
T  29151 taaccaaaatcaat 29138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 154; Significance: 1e-81; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 112 - 325
Target Start/End: Complemental strand, 2430522 - 2430309
Alignment:
Q  112 aaaatccatttatgattttagataagtttaaataattattttaattcagaatgaaatatttagttttaattataaggataatttagtcattagacattta 211  Q
    |||||||||||||||||||||||||||| ||||||||||||||| | ||||||| ||||||||||||||||  ||||||||||||||||||| ||| | |    
T  2430522 aaaatccatttatgattttagataagttaaaataattattttaagtaagaatgagatatttagttttaatttgaaggataatttagtcattacacactca 2430423  T
Q  212 aaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacataatctattcacattcaactcacttt 311  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||||  |||||||||||||    
T  2430422 aaatcaattttgattcaaactatccaaacaacatcaactcataagaatcacttctattgaagtgtatccaaacataatcaattcatgttcaactcacttt 2430323  T
Q  312 taaccaaaatcaat 325  Q
    ||||||||||||||    
T  2430322 taaccaaaatcaat 2430309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 112 - 325
Target Start/End: Complemental strand, 33954127 - 33953914
Alignment:
Q  112 aaaatccatttatgattttagataagtttaaataattattttaattcagaatgaaatatttagttttaattataaggataatttagtcattagacattta 211  Q
    |||||||||||||||||||||||| ||| ||||||||||||||| | ||||||| ||| ||||||||||||| ||||||||||||||||||| ||||| |    
T  33954127 aaaatccatttatgattttagatatgttcaaataattattttaagtaagaatgagatagttagttttaattaaaaggataatttagtcattacacattca 33954028  T
Q  212 aaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacataatctattcacattcaactcacttt 311  Q
    |||| |||||||||||||||||| | |||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||| || |||||||||||||    
T  33954027 aaattaattttgattcaaactatccgaacaacatcaactcatcagaatcacttctattaaagtgtatccaaacataatcaatttacgttcaactcacttt 33953928  T
Q  312 taaccaaaatcaat 325  Q
    |||  |||||||||    
T  33953927 taaataaaatcaat 33953914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 179 - 325
Target Start/End: Original strand, 22482142 - 22482289
Alignment:
Q  179 aattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtat 278  Q
    ||||| ||||||| ||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||| || | ||||||||| || ||||||||||    
T  22482142 aattaaaaggatagtttagtcattatacattcaaaatcaattttgattcaaactatccaaacaacatcaacccacatgaatcacttttaataaagtgtat 22482241  T
Q  279 ccaaacat-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||    
T  22482242 ccaaacataaatcaattcacattcaactcacttttaaccaaaatcaat 22482289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 179 - 325
Target Start/End: Original strand, 41834845 - 41834992
Alignment:
Q  179 aattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtat 278  Q
    ||||| ||||||||||| ||||||  ||||| |||||||||||| ||||||||||| ||||||||||||| || ||||||||||||||||||||||||||    
T  41834845 aattaaaaggataatttggtcattgcacattcaaaatcaattttcattcaaactatccaaacaacatcaattcgtaagaatcacttctagtaaagtgtat 41834944  T
Q  279 ccaaacat-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||||||| |||| |||||| | |||||||||||||||||||||||||    
T  41834945 ccaaacataaatcaattcacttccaactcacttttaaccaaaatcaat 41834992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 178 - 325
Target Start/End: Complemental strand, 13253242 - 13253095
Alignment:
Q  178 taattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgta 277  Q
    |||||| |||| |||||| ||||||  |  || |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    ||||||    
T  13253242 taattaaaagggtaatttggtcatttaatgttcaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttttaaatgagtgta 13253143  T
Q  278 tccaaacataatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  13253142 tccaaacataatcaattcatattcaactcacttttaaccaaaatcaat 13253095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 179 - 325
Target Start/End: Original strand, 32454490 - 32454636
Alignment:
Q  179 aattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtat 278  Q
    ||||| ||||||||||| ||||||  ||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||   ||||||||    
T  32454490 aattacaaggataatttggtcattttacattcaaaattaattttgattcaaactatccaaacaacatcaactcataagaatcacttttaaacaagtgtat 32454589  T
Q  279 ccaaacataatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||||||||||| |||||| |  ||||||||||||||||||||||||    
T  32454590 ccaaacataatcaattcacctcaaactcacttttaaccaaaatcaat 32454636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 211 - 325
Target Start/End: Original strand, 10058059 - 10058174
Alignment:
Q  211 aaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacat-aatctattcacattcaactcact 309  Q
    |||||||||||| ||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||||| |||| |||||  | |||||||||    
T  10058059 aaaatcaattttcattcaaactatccaaacaacatcaattcgtaagaatcacttctagtaaagtgtatccaaacataaatcaattcatttccaactcact 10058158  T
Q  310 tttaaccaaaatcaat 325  Q
    ||||||||||||||||    
T  10058159 tttaaccaaaatcaat 10058174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 169 - 325
Target Start/End: Complemental strand, 40495526 - 40495370
Alignment:
Q  169 atttagttttaattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctag 268  Q
    |||| |||||||||| |||||||||||  |||||  |||||  ||||||||||||||| ||||||||||||||| |||||||||||| |||||||| ||     
T  40495526 atttggttttaattaaaaggataatttgatcattgtacattccaaatcaattttgatttaaactattcaaacaa-atcaactcataaaaatcacttttaa 40495428  T
Q  269 taaagtgtatccaaacat-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
     ||||||||||||||||| |||| ||| ||||  ||||||||||||||||||||||||    
T  40495427 aaaagtgtatccaaacataaatcaatttacatcaaactcacttttaaccaaaatcaat 40495370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 179 - 325
Target Start/End: Complemental strand, 9275643 - 9275496
Alignment:
Q  179 aattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtat 278  Q
    ||||| || |||||||| ||||||| ||||| |||||||| ||| |||||||  || |||||||||||||||||||||||||| || || ||||||||||    
T  9275643 aattaaaaagataatttggtcattacacattcaaaatcaagtttcattcaaatcatccaaacaacatcaactcataagaatcaattttattaaagtgtat 9275544  T
Q  279 ccaaacat-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||||||| |||| ||| ||||  ||||||||||||||||||||||||    
T  9275543 ccaaacataaatcaattaacatctaactcacttttaaccaaaatcaat 9275496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 205 - 325
Target Start/End: Original strand, 3667833 - 3667954
Alignment:
Q  205 acatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacat-aatctattcacattcaa 303  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||| |||| |||||||| || |  ||||||||||||||| |||| ||||||||||||    
T  3667833 acatttaaaatcaattttgattcaaactatccaaacaatatcaactaataaaaatcacttttaattgagtgtatccaaacataaatcaattcacattcaa 3667932  T
Q  304 ctcacttttaaccaaaatcaat 325  Q
    ||||||||| | ||||||||||    
T  3667933 ctcactttttaacaaaatcaat 3667954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 112 - 325
Target Start/End: Original strand, 24045711 - 24045930
Alignment:
Q  112 aaaatccatttatgattttagataagtttaaataattattttaattcagaatgaaatatttagttttaa------ttataaggataatttagtcattaga 205  Q
    ||||| |||||||||||||||||||||| |||||||||| | || |  |||||| ||||||||||||||      ||| ||||||||||||||||||  |    
T  24045711 aaaatgcatttatgattttagataagttaaaataattatctaaaatatgaatgagatatttagttttaaatctaattaaaaggataatttagtcattgta 24045810  T
Q  206 catttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacat-aatctattcacattcaac 304  Q
    | || |||||||||||| ||||||| ||| |||||||||||||| ||||| ||||| ||  |||  || | |||||||||| |||| ||||||||   ||    
T  24045811 cgttcaaaatcaattttaattcaaattatccaaacaacatcaacccataaaaatcattttaagt-gagagcatccaaacataaatcaattcacatcagac 24045909  T
Q  305 tcacttttaaccaaaatcaat 325  Q
    |||||||||||||||||||||    
T  24045910 tcacttttaaccaaaatcaat 24045930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 176 - 325
Target Start/End: Original strand, 40885160 - 40885311
Alignment:
Q  176 tttaattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaa-tcacttctagtaaagt 274  Q
    |||||||| |||||||||||  |||||| | ||| |||||||||||||||||||||||| ||||||| |||||||||||| || |||||| ||   ||||    
T  40885160 tttaattaaaaggataatttgatcattacatattcaaaatcaattttgattcaaactatccaaacaatatcaactcataaaaactcacttttaaacaagt 40885259  T
Q  275 gtatccaaacat-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    || ||||||||| |||| |||||||| |||||||||||||| ||||||||||    
T  40885260 gtgtccaaacataaatcaattcacatccaactcacttttaatcaaaatcaat 40885311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 187 - 325
Target Start/End: Complemental strand, 40791220 - 40791082
Alignment:
Q  187 ggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacat 286  Q
    ||||||| | ||||||| ||||| | |||||||||||||||||  ||| ||||||| ||||||||| ||||||||||| || | ||| ||||||||||||    
T  40791220 ggataatatggtcattatacattcacaatcaattttgattcaatgtatccaaacaatatcaactcaaaagaatcacttttaattaagcgtatccaaacat 40791121  T
Q  287 aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||| ||||| ||  ||||||||||||||||||||||||    
T  40791120 aatcaattcatatctaactcacttttaaccaaaatcaat 40791082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 187 - 325
Target Start/End: Original strand, 42146269 - 42146407
Alignment:
Q  187 ggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacat 286  Q
    ||||||| | ||||||| ||||| | |||||||||||||||||  ||| ||||||| ||||||||| ||||||||||| || | ||| ||||||||||||    
T  42146269 ggataatatggtcattatacattcacaatcaattttgattcaatgtatccaaacaatatcaactcaaaagaatcacttttaattaagcgtatccaaacat 42146368  T
Q  287 aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||| ||||| ||  ||||||||||||||||||||||||    
T  42146369 aatcaattcatatctaactcacttttaaccaaaatcaat 42146407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 205 - 325
Target Start/End: Original strand, 35760168 - 35760289
Alignment:
Q  205 acatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacat-aatctattcacattcaa 303  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||| |||| ||||| || || |  ||||||||||||||| |||| ||||||||||||    
T  35760168 acatttaaaatcaattttgattcaaactatccaaacaatatcaactaataaaaatcagttttaattgagtgtatccaaacataaatcaattcacattcaa 35760267  T
Q  304 ctcacttttaaccaaaatcaat 325  Q
    ||||||||| | ||||||||||    
T  35760268 ctcactttttagcaaaatcaat 35760289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 196 - 325
Target Start/End: Original strand, 4292119 - 4292249
Alignment:
Q  196 agtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacat-aatctatt 294  Q
    |||||||| ||||| ||||| |||||||||||||| ||| ||||||| ||||||  | |||||||||||||| | |||||||||||||||| |||| |||    
T  4292119 agtcattacacattcaaaattaattttgattcaaattatccaaacaatatcaaccaacaagaatcacttctaattaagtgtatccaaacataaatcaatt 4292218  T
Q  295 cacattcaactcacttttaaccaaaatcaat 325  Q
    ||||||||||| | |||||| ||||||||||    
T  4292219 cacattcaacttatttttaatcaaaatcaat 4292249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 132 - 325
Target Start/End: Original strand, 7714841 - 7715040
Alignment:
Q  132 gataagtttaaataattattttaattcagaatgaaatatttagttttaat-----tataaggataatttagtcattagacatttaaaatcaattttgatt 226  Q
    |||||||| |||||||||| | || | | ||||| ||||||| |||||||     || ||||||||||||||||||| || || |||||||||||| |||    
T  7714841 gataagttcaaataattatctaaaatgaaaatgagatatttatttttaataacattaaaaggataatttagtcattatactttcaaaatcaattttaatt 7714940  T
Q  227 caaactattcaaacaacatcaactcataagaatc-acttctagtaaagtgtatccaaacata-atctattcacattcaactcacttttaaccaaaatcaa 324  Q
    |||||||| ||||||||||||||| ||||||||| | ||| |||  ||||| || ||||||| ||| ||||| ||  |||||||||||||||||||||||    
T  7714941 caaactatccaaacaacatcaacttataagaatcaatttcaagt-gagtgtgtcaaaacatatatcaattcatatctaactcacttttaaccaaaatcaa 7715039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 185 - 325
Target Start/End: Original strand, 32030675 - 32030814
Alignment:
Q  185 aaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaac 284  Q
    ||||||| ||||||||||| || || ||||||||||||||||||||||||||||||||||||||  |||||||||||||| |    |||| |||| ||||    
T  32030675 aaggatagtttagtcattacaccttcaaaatcaattttgattcaaactattcaaacaacatcaa--cataagaatcacttttgaataagtatatcaaaac 32030772  T
Q  285 -ataatctattcacattcaactcacttttaaccaaaatcaat 325  Q
     | |||| ||||||||  |||| |||||||||||||||||||    
T  32030773 aaaaatcaattcacatctaacttacttttaaccaaaatcaat 32030814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 185 - 325
Target Start/End: Complemental strand, 3060375 - 3060236
Alignment:
Q  185 aaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaac 284  Q
    ||||||||||| |||| || ||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||||  |||  ||| |||||||||    
T  3060375 aaggataatttggtcaatacacattcaaaatcaattttgattcaaactatccaaacaacat-aactcataagaatcactttaagt-gagtatatccaaac 3060278  T
Q  285 at-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    || |||  ||||| ||  ||||||||||||| ||||||||||    
T  3060277 ataaattaattcatataaaactcacttttaatcaaaatcaat 3060236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 112 - 288
Target Start/End: Complemental strand, 28869733 - 28869553
Alignment:
Q  112 aaaatccatttatgattttagataagtttaaataattattttaattcagaatgaaatatttagttttaa------ttataaggataatttagtcattaga 205  Q
    ||||| ||||||||||||||||||| || |||| ||||| | |||| ||||| | ||||||||||||||      ||| ||||||||||| ||||||| |    
T  28869733 aaaattcatttatgattttagataaattcaaatgattatct-aattaagaataagatatttagttttaaatacaattaaaaggataatttggtcattaca 28869635  T
Q  206 catttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacataa 288  Q
    || |  ||||| ||||| | ||||||||| ||||||||||||||||||||||||||||| ||   |||||||| |||||||||    
T  28869634 cactcgaaatctatttt-actcaaactatccaaacaacatcaactcataagaatcacttttaagtaagtgtattcaaacataa 28869553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 185 - 325
Target Start/End: Original strand, 27021087 - 27021228
Alignment:
Q  185 aaggataatttagtcattagacatttaaaatcaattttgattcaaac-tattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaa 283  Q
    ||||||||||| ||||||| ||||| ||||||||||||||||||| | ||| |||||||||||||||  |||||||||||| ||    ||| || |||||    
T  27021087 aaggataatttcgtcattatacattcaaaatcaattttgattcaatcttatccaaacaacatcaacttctaagaatcacttttaagtgagtata-ccaaa 27021185  T
Q  284 cat-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    ||| |||| ||||||||| |||||| |||||||||||||||||    
T  27021186 cataaatcaattcacatttaactcatttttaaccaaaatcaat 27021228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 208 - 325
Target Start/End: Complemental strand, 39988097 - 39987979
Alignment:
Q  208 tttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacat-aatctattcacattcaactc 306  Q
    |||||||  |||||||||| |||  || ||||||||||||||||||||||||||||| ||   |||||||||||||||| |||| |||||| |  |||||    
T  39988097 tttaaaagaaattttgatttaaatcatccaaacaacatcaactcataagaatcacttttaaataagtgtatccaaacataaatcaattcacctcaaactc 39987998  T
Q  307 acttttaaccaaaatcaat 325  Q
    |||||||||||||||||||    
T  39987997 acttttaaccaaaatcaat 39987979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 169 - 325
Target Start/End: Complemental strand, 16158634 - 16158477
Alignment:
Q  169 atttagttttaattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctag 268  Q
    |||| |||||||||| ||| ||| |||  |||||| ||||| ||||||||||||||||||||  || |||| |||||||| || |||||||||||| ||     
T  16158634 atttcgttttaattaaaagaatattttgatcattacacattcaaaatcaattttgattcaaatcatccaaagaacatcaattcctaagaatcacttttaa 16158535  T
Q  269 taaagtgtatccaaacat-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
     |||||| ||||||| || |||  ||||||||  ||||||||||||| ||||||||||    
T  16158534 aaaagtgcatccaaatataaattaattcacatcaaactcacttttaatcaaaatcaat 16158477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 208 - 325
Target Start/End: Complemental strand, 7386062 - 7385944
Alignment:
Q  208 tttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacat-aatctattcacattcaactc 306  Q
    ||||||| ||||||||||| ||| ||| ||||||||||||||||||||||||||||| ||   ||||||||  |||||| |||| |||||| |  ||| |    
T  7386062 tttaaaagcaattttgatttaaattatccaaacaacatcaactcataagaatcacttttaaataagtgtatttaaacataaatcaattcacctcaaaccc 7385963  T
Q  307 acttttaaccaaaatcaat 325  Q
    |||||||||||||||||||    
T  7385962 acttttaaccaaaatcaat 7385944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 208 - 325
Target Start/End: Complemental strand, 8049181 - 8049063
Alignment:
Q  208 tttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacat-aatctattcacattcaactc 306  Q
    ||||||| ||||||||||| |||  || ||||||||| ||||||||||||||||||| ||   |||||||||||||||| |||| ||| || |  |||||    
T  8049181 tttaaaagcaattttgatttaaatcatccaaacaacaacaactcataagaatcacttttaaataagtgtatccaaacataaatcaattaacctcaaactc 8049082  T
Q  307 acttttaaccaaaatcaat 325  Q
    |||||||||||||||||||    
T  8049081 acttttaaccaaaatcaat 8049063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 205 - 288
Target Start/End: Complemental strand, 41740726 - 41740643
Alignment:
Q  205 acatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacataa 288  Q
    ||||| |||||||||||||||| ||||||| |||||||||||||||||||| |||||||| ||   |||||||| |||||||||    
T  41740726 acattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaatcacttttaaacaagtgtattcaaacataa 41740643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 212 - 325
Target Start/End: Complemental strand, 5710511 - 5710398
Alignment:
Q  212 aaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacat-aatctattcacattcaactcactt 310  Q
    ||||||||||| ||||||||||| ||||||| ||| |||||||| |||||||| || | ||| |||||||||||| || | |||||||   |||||||||    
T  5710511 aaatcaatttttattcaaactatccaaacaatatctactcataaaaatcacttgtaat-aagcgtatccaaacataaagcaattcacaccaaactcactt 5710413  T
Q  311 ttaaccaaaatcaat 325  Q
    |||||||||||||||    
T  5710412 ttaaccaaaatcaat 5710398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 325
Target Start/End: Complemental strand, 34107068 - 34106959
Alignment:
Q  217 aattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaaca-taatctattcacattcaactcacttttaac 315  Q
    ||||||||||||| ||||||||||||||| || |||||||||| |||| ||    | |||||  ||||| ||||| ||||||||  ||||||||||||||    
T  34107068 aattttgattcaacctattcaaacaacattaattcataagaattacttttaaatgaatgtatttaaacattaatcaattcacatctaactcacttttaac 34106969  T
Q  316 caaaatcaat 325  Q
    ||||| ||||    
T  34106968 caaaaacaat 34106959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 211 - 313
Target Start/End: Original strand, 7178763 - 7178865
Alignment:
Q  211 aaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacat-aatctattcacattcaactcact 309  Q
    |||| ||||||||||||||||||  |||||||||| || | |||||||||| || |||   | ||||||||||||| |||| ||| ||||||||||||||    
T  7178763 aaaagcaattttgattcaaactacccaaacaacataaattgataagaatcaattttaggttattgtatccaaacataaatcaatt-acattcaactcact 7178861  T
Q  310 ttta 313  Q
    ||||    
T  7178862 ttta 7178865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 276 - 325
Target Start/End: Complemental strand, 2483776 - 2483726
Alignment:
Q  276 tatccaaacataa-tctattcacattcaactcacttttaaccaaaatcaat 325  Q
    ||||||||||||| || |||||||||||||||||||||||| |||||||||    
T  2483776 tatccaaacataaatcaattcacattcaactcacttttaactaaaatcaat 2483726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 2694887 - 2694834
Alignment:
Q  211 aaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcactt 264  Q
    |||||||||||||||||||| ||| |||||| |||||| | |||||||||||||    
T  2694887 aaaatcaattttgattcaaattatacaaacatcatcaattgataagaatcactt 2694834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 276 - 325
Target Start/End: Complemental strand, 4569141 - 4569092
Alignment:
Q  276 tatccaaacataatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||||||| |||||| ||||||| ||||||||||||||| ||||||||||    
T  4569141 tatccaaatataatcaattcacactcaactcacttttaatcaaaatcaat 4569092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 275 - 325
Target Start/End: Original strand, 22811075 - 22811126
Alignment:
Q  275 gtatccaaacataa-tctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||||||||||||| ||  || ||||||||||||||||||||||||||||||    
T  22811075 gtatccaaacataaatcactttacattcaactcacttttaaccaaaatcaat 22811126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 211 - 321
Target Start/End: Original strand, 41959446 - 41959556
Alignment:
Q  211 aaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacat-aatctattcacattcaactcact 309  Q
    |||||||||| |  ||||||||||  ||||||||| |||||||||||||||||| || |   |||| ||||||||| |||  |||||| || ||||||||    
T  41959446 aaaatcaattctatttcaaactatgaaaacaacattaactcataagaatcactttta-tgtggtgtttccaaacataaattaattcacttttaactcact 41959544  T
Q  310 tttaaccaaaat 321  Q
    |||||| |||||    
T  41959545 tttaactaaaat 41959556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 325
Target Start/End: Original strand, 19784884 - 19784913
Alignment:
Q  296 acattcaactcacttttaaccaaaatcaat 325  Q
    ||||||||||||||||||||||||||||||    
T  19784884 acattcaactcacttttaaccaaaatcaat 19784913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 245
Target Start/End: Complemental strand, 3747723 - 3747683
Alignment:
Q  205 acatttaaaatcaattttgattcaaactattcaaacaacat 245  Q
    |||| ||||||||||||||||| ||||||| ||||||||||    
T  3747723 acatgtaaaatcaattttgattaaaactatccaaacaacat 3747683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 261
Target Start/End: Original strand, 16843517 - 16843573
Alignment:
Q  205 acatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatca 261  Q
    ||||| |||||||||| | ||| ||||||| |||||||||||||||| ||| |||||    
T  16843517 acattcaaaatcaattatcatttaaactatccaaacaacatcaactcgtaaaaatca 16843573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 40979985 - 40980037
Alignment:
Q  193 tttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacat 245  Q
    |||||| |||| ||||| |||||||||||||||  ||||||| ||||||||||    
T  40979985 tttagtaattatacattcaaaatcaattttgatcaaaactatccaaacaacat 40980037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 153; Significance: 4e-81; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 111 - 325
Target Start/End: Complemental strand, 36121763 - 36121560
Alignment:
Q  111 caaaatccatttatgattttagataagtttaaataattattttaattcagaatgaaatatttagttttaattataaggataatttagtcattagacattt 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||     
T  36121763 caaaatccatttatgattttagataagtttaaataattattttaattaagaatgaaatatttagttttaattataaggataatttagttattagacattc 36121664  T
Q  211 aaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacataatctattcacattcaactcactt 310  Q
    ||||| |||||||||||||||||||||||           ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  36121663 aaaattaattttgattcaaactattcaaa-----------catgagaatcacttatagtaaagtgtatccaaacataatctattcacattcaactcactt 36121575  T
Q  311 ttaaccaaaatcaat 325  Q
    |||||||||||||||    
T  36121574 ttaaccaaaatcaat 36121560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 179 - 325
Target Start/End: Original strand, 43550838 - 43550985
Alignment:
Q  179 aattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtat 278  Q
    ||||| ||||||| ||||||| ||| ||||| |||||||||||||||||||| ||| |||||||||||||| || ||||||||||| || ||||||||||    
T  43550838 aattaaaaggatagtttagtctttacacattcaaaatcaattttgattcaaattatccaaacaacatcaacccacaagaatcacttttaataaagtgtat 43550937  T
Q  279 ccaaacat-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||    
T  43550938 ccaaacataaatcaattcacattcaactcacttttaaccaaaatcaat 43550985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 185 - 325
Target Start/End: Complemental strand, 22936949 - 22936808
Alignment:
Q  185 aaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaac 284  Q
    ||||||| ||||||||||| | ||| |||| ||| ||||||||||||||| |||||||||||||  || |||||||||||||| ||||||||||||||||    
T  22936949 aaggatagtttagtcattatatattcaaaaccaaatttgattcaaactatccaaacaacatcaatccacaagaatcacttctaataaagtgtatccaaac 22936850  T
Q  285 at-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    || |||| ||||||||||||||||||||||||||||||||||    
T  22936849 ataaatcaattcacattcaactcacttttaaccaaaatcaat 22936808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 179 - 325
Target Start/End: Complemental strand, 28425634 - 28425487
Alignment:
Q  179 aattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtat 278  Q
    ||||| ||||||| ||| ||||||| || || |||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||  |||||||||    
T  28425634 aattaaaaggatagtttggtcattacacgttcaaaatcaattttgattcaaactatccaaacaacgtcaactcataagaatcacttgtaagaaagtgtat 28425535  T
Q  279 ccaaacat-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||||||| |||| |||||| |  ||||||||||||||||||||||||    
T  28425534 ccaaacataaatcaattcacctcaaactcacttttaaccaaaatcaat 28425487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 211 - 325
Target Start/End: Complemental strand, 25698089 - 25697975
Alignment:
Q  211 aaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacataatctattcacattcaactcactt 310  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||   |||| ||||||||||||||| |||||||| ||||||||||    
T  25698089 aaaatcaattttgattcaaactatccaaacaacatcaactcataagaatcacttttaaataagtttatccaaacataatcaattcacatccaactcactt 25697990  T
Q  311 ttaaccaaaatcaat 325  Q
    |||| ||||||||||    
T  25697989 ttaagcaaaatcaat 25697975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 179 - 325
Target Start/End: Original strand, 44926788 - 44926934
Alignment:
Q  179 aattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtat 278  Q
    ||||| || |||||||| ||||||  ||||| ||||| |||||||||||||||||| |||| |||||||||||||||||||||||| ||   ||||||||    
T  44926788 aattacaaagataatttggtcattttacattcaaaattaattttgattcaaactatccaaataacatcaactcataagaatcacttttaaacaagtgtat 44926887  T
Q  279 ccaaacataatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||||||||||| |||||| |  ||||||||||||||||||||||||    
T  44926888 ccaaacataatcaattcacctcaaactcacttttaaccaaaatcaat 44926934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 206 - 325
Target Start/End: Complemental strand, 41289193 - 41289073
Alignment:
Q  206 catttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacat-aatctattcacattcaac 304  Q
    |||| |||||||||||||||||||||||| ||||||||||||||  ||||||||||||| ||||||||||||||||||||| |||| ||||||| |||||    
T  41289193 cattcaaaatcaattttgattcaaactatccaaacaacatcaacctataagaatcacttttagtaaagtgtatccaaacataaatcaattcacaatcaac 41289094  T
Q  305 tcacttttaaccaaaatcaat 325  Q
    ||||||||||  |||||||||    
T  41289093 tcacttttaattaaaatcaat 41289073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 179 - 325
Target Start/End: Original strand, 40742071 - 40742218
Alignment:
Q  179 aattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtat 278  Q
    ||||| |||||||||||  |||||| ||||| |||||||| ||| |||||||  || ||||||| |||||||||||||||||| || || ||||||||||    
T  40742071 aattaaaaggataatttgatcattacacattcaaaatcaagtttcattcaaatcatccaaacaatatcaactcataagaatcaattttattaaagtgtat 40742170  T
Q  279 ccaaacat-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||||||| |||| |||||||| |||||||||||||||||||||||||    
T  40742171 ccaaacataaatcaattcacatccaactcacttttaaccaaaatcaat 40742218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 179 - 325
Target Start/End: Original strand, 8124918 - 8125064
Alignment:
Q  179 aattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtat 278  Q
    ||||| |||| ||| || |||||||  ||||||||||||||||||||||||||||| |||||||| ||||||| |||||||||||| ||    |||||||    
T  8124918 aattaaaagggtaagttggtcattatccatttaaaatcaattttgattcaaactatccaaacaacttcaactcctaagaatcacttttaaatgagtgtat 8125017  T
Q  279 ccaaacataatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||||||||||| ||||||||  ||||||||| ||||||||||||||    
T  8125018 ccaaacataatcaattcacatcaaactcacttctaaccaaaatcaat 8125064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 178 - 325
Target Start/End: Original strand, 3467479 - 3467627
Alignment:
Q  178 taattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgta 277  Q
    |||||| ||||||| ||| ||||||  | |||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||| ||   || | ||    
T  3467479 taattaaaaggatagtttggtcattccatatttaaaatcaattttgattcaaactatccaaccaacatcaattcataagaatcacttttaaataaatata 3467578  T
Q  278 tccaaaca-taatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    ||||||||  |||| ||||||||||||||||||||||||||||||||||    
T  3467579 tccaaacagaaatcaattcacattcaactcacttttaaccaaaatcaat 3467627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 178 - 325
Target Start/End: Original strand, 27649692 - 27649839
Alignment:
Q  178 taattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgta 277  Q
    |||||| |||| |||||| ||||||  |  || |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||    ||||||    
T  27649692 taattaaaagggtaatttggtcattcaatgttcaaaatcaattttgattcaaactatccaaacaacatcaactcataagaatcacttttaaatgagtgta 27649791  T
Q  278 tccaaacataatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    || ||||||| || ||||| || ||| |||||||||||||||||||||    
T  27649792 tctaaacatattcaattcatatccaaatcacttttaaccaaaatcaat 27649839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 188 - 325
Target Start/End: Complemental strand, 3097359 - 3097221
Alignment:
Q  188 gataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacat- 286  Q
    |||||||| |||| || || || |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||    ||| |||||||||||     
T  3097359 gataatttggtcaatacacgttcaaaatcaattttgattcaaactatccaaacaacatcaactcataagaatcacttttaagtgagtatatccaaacata 3097260  T
Q  287 aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||| ||||| ||  ||||||||||||||||||||||||    
T  3097259 aatcaattcatatcaaactcacttttaaccaaaatcaat 3097221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 205 - 325
Target Start/End: Complemental strand, 33627170 - 33627049
Alignment:
Q  205 acatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacat-aatctattcacattcaa 303  Q
    ||||| |||||| ||||||||||||||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||| |||| ||||  || |||    
T  33627170 acattcaaaatcgattttgattcaaactatccaaacaacattaactcataagaatcacttttagtaaagtgtatccaaacataaatcaattcttatccaa 33627071  T
Q  304 ctcacttttaaccaaaatcaat 325  Q
    |||| ||||||  |||||||||    
T  33627070 ctcagttttaaataaaatcaat 33627049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 179 - 325
Target Start/End: Complemental strand, 6399270 - 6399123
Alignment:
Q  179 aattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtat 278  Q
    ||||| || |||||||| ||||||  ||||| |||||||||||||||| ||| ||| ||||||||||||||||||||||||||||| ||    |||||||    
T  6399270 aattaaaaagataatttggtcattgcacattcaaaatcaattttgattaaaattatccaaacaacatcaactcataagaatcacttttaagtgagtgtat 6399171  T
Q  279 ccaaacat-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    | |||||| |||| ||||||||  |||||||||||||||| |||||||    
T  6399170 cgaaacataaatcaattcacatcaaactcacttttaaccataatcaat 6399123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 179 - 325
Target Start/End: Complemental strand, 40742455 - 40742310
Alignment:
Q  179 aattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtat 278  Q
    ||||| |||| |||||| |||| || |||||||||||||||||||||| ||| ||| |||||| ||||||||||||||||||||||  | |  |||||||    
T  40742455 aattaaaagggtaatttggtcactacacatttaaaatcaattttgatttaaaatatccaaacatcatcaactcataagaatcacttacatt--agtgtat 40742358  T
Q  279 ccaaacat-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||||||| |||| ||||| ||  |||||||||||||| |||||||||    
T  40742357 ccaaacataaatcaattcagatcaaactcacttttaacgaaaatcaat 40742310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 218 - 325
Target Start/End: Complemental strand, 24897710 - 24897603
Alignment:
Q  218 attttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacataatctattcacattcaactcacttttaacca 317  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| || ||   || ||||||||||||||||  ||||| || |||||||||||||||||    
T  24897710 attttgattcaaattatccaaacaacatcaactcataagaatcaattttaaataaatgtatccaaacataattcattcatatccaactcacttttaacca 24897611  T
Q  318 aaatcaat 325  Q
    ||||||||    
T  24897610 aaatcaat 24897603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 211 - 325
Target Start/End: Original strand, 38114424 - 38114538
Alignment:
Q  211 aaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacataatctattcacattcaactcactt 310  Q
    ||||||||||||  ||| || |||||||||||| ||||||||||||||||||||  |    ||||||||||||||||||| |||||||| ||||| ||||    
T  38114424 aaaatcaatttttgttcgaaatattcaaacaacctcaactcataagaatcacttgaaaccgagtgtatccaaacataatcaattcacatccaacttactt 38114523  T
Q  311 ttaaccaaaatcaat 325  Q
    |||||||||||||||    
T  38114524 ttaaccaaaatcaat 38114538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 185 - 325
Target Start/End: Complemental strand, 440345 - 440204
Alignment:
Q  185 aaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaac 284  Q
    |||||||| || ||||||| ||||| ||||||| ||||||||||| |||| |||||||| | ||||||||||||||| || ||    | |||||||||||    
T  440345 aaggataagttggtcattatacattcaaaatcagttttgattcaatctatccaaacaacgttaactcataagaatcatttttaactgaatgtatccaaac 440246  T
Q  285 at-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    || |||| |||||||| |||||||| ||||||||||||||||    
T  440245 ataaatcaattcacatccaactcacatttaaccaaaatcaat 440204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 189 - 325
Target Start/End: Complemental strand, 4941933 - 4941796
Alignment:
Q  189 ataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacat-a 287  Q
    ||||||| ||||||  ||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||| ||| ||   || | ||||||||||| |    
T  4941933 ataatttggtcattttacattcaaaatcaattttaattcaaattattcaaacaacatcaactcataagaatcgcttttaaataattttatccaaacataa 4941834  T
Q  288 atctattcacattcaactcacttttaaccaaaatcaat 325  Q
    ||| |||||| |  ||||||||||||| ||||||||||    
T  4941833 atcaattcacctcaaactcacttttaatcaaaatcaat 4941796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 205 - 325
Target Start/End: Original strand, 42148978 - 42149099
Alignment:
Q  205 acatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacat-aatctattcacattcaa 303  Q
    ||||| |||||||||||||||||||| |||  |||||||||||||||||| ||||||||| ||   |||| ||||||||||| |||| |||||| |  ||    
T  42148978 acattcaaaatcaattttgattcaaattatctaaacaacatcaactcatacgaatcacttttaaataagtctatccaaacataaatcaattcacctcaaa 42149077  T
Q  304 ctcacttttaaccaaaatcaat 325  Q
    ||||||||||||||||||||||    
T  42149078 ctcacttttaaccaaaatcaat 42149099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 211 - 325
Target Start/End: Complemental strand, 36114170 - 36114056
Alignment:
Q  211 aaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacataatctattcacattcaactcactt 310  Q
    |||||||||||||||||||| ||| ||||||| ||||||||||||||||||||| ||    ||||||||||||||||| | ||  ||||  |||| ||||    
T  36114170 aaaatcaattttgattcaaattatccaaacaatatcaactcataagaatcacttttaaacgagtgtatccaaacataaccaatctacatcaaacttactt 36114071  T
Q  311 ttaaccaaaatcaat 325  Q
    |||| ||||||||||    
T  36114070 ttaatcaaaatcaat 36114056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 206 - 325
Target Start/End: Original strand, 15206670 - 15206790
Alignment:
Q  206 catttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttcta-gtaaagtgtatccaaacataa-tctattcacattcaa 303  Q
    |||| |||||||||||||   |||||||| |||||||||| || |  ||||||||||||||| || || ||||||||||||||| || ||||||||||||    
T  15206670 cattcaaaatcaattttgggccaaactatccaaacaacatgaatttttaagaatcacttctaagtcaa-tgtatccaaacataaatcaattcacattcaa 15206768  T
Q  304 ctcacttttaaccaaaatcaat 325  Q
    |||||||||| |||||||||||    
T  15206769 ctcacttttacccaaaatcaat 15206790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 207 - 264
Target Start/End: Original strand, 41981132 - 41981189
Alignment:
Q  207 atttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcactt 264  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  41981132 atttaaaatcaattttgattcaaagtatccaaacaacatcaactcataagaatcactt 41981189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 206 - 325
Target Start/End: Complemental strand, 31246450 - 31246330
Alignment:
Q  206 catttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacataa-tctattcacattcaac 304  Q
    |||||||||||||||||||| |||  ||| |||||||||| || | ||||||||||||| |  |  |  |||||||||||||| || |||||||||||||    
T  31246450 catttaaaatcaattttgatccaagttatccaaacaacatgaatttataagaatcacttttgctttaaggtatccaaacataaatcaattcacattcaac 31246351  T
Q  305 tcacttttaaccaaaatcaat 325  Q
    ||||||||||| |||||||||    
T  31246350 tcacttttaacaaaaatcaat 31246330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 205 - 288
Target Start/End: Original strand, 29023212 - 29023295
Alignment:
Q  205 acatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacataa 288  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||| || ||   ||||||||||||| ||||    
T  29023212 acattcaaaatcaattttgattcaaactatccaaacaacatcaactcataacaatcaattttaaacaagtgtatccaaatataa 29023295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 271 - 325
Target Start/End: Original strand, 25497731 - 25497785
Alignment:
Q  271 aagtgtatccaaacataatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  25497731 aagtgtatccaaacataatcaattcacatccaactcacttttaaccaaaatcaat 25497785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 36121874 - 36121829
Alignment:
Q  1 ggggagtgggagacgtgagggagttattaaaaataactcaattgat 46  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  36121874 ggggagtgggagacgtgagggagttattaaaaataactcaattgat 36121829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 179 - 259
Target Start/End: Complemental strand, 30081812 - 30081732
Alignment:
Q  179 aattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaat 259  Q
    ||||| ||||||||||| ||||||| |||| |||||||||||||||  |||||||| |||||||||||| | |||||||||    
T  30081812 aattaaaaggataatttggtcattacacatctaaaatcaattttgaaacaaactatccaaacaacatcagcccataagaat 30081732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 185 - 264
Target Start/End: Original strand, 16915014 - 16915093
Alignment:
Q  185 aaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcactt 264  Q
    |||| |||||||||||||| ||||| ||||||||||||||| ||||| |  |||||| ||| ||||||||||||||||||    
T  16915014 aaggttaatttagtcattacacattcaaaatcaattttgatacaaaccaaccaaacatcattaactcataagaatcactt 16915093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 219 - 325
Target Start/End: Complemental strand, 42143486 - 42143379
Alignment:
Q  219 ttttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacat-aatctattcacattcaactcacttttaacca 317  Q
    ||||| |||||| ||| |||||||| |||||||||||||||||||| ||   |||| ||||||||||| |||| |||||| |  |||||||||||||| |    
T  42143486 ttttgtttcaaattatccaaacaacgtcaactcataagaatcacttttaaataagtttatccaaacataaatcaattcacctcaaactcacttttaacta 42143387  T
Q  318 aaatcaat 325  Q
    ||||||||    
T  42143386 aaatcaat 42143379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 211 - 319
Target Start/End: Complemental strand, 45147380 - 45147271
Alignment:
Q  211 aaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacataatc-tattcacattcaactcact 309  Q
    |||||||||||||||||||  ||||||||||| ||||||| ||||||||||||| ||    || || ||||||||||| |  |||  |||||||||||||    
T  45147380 aaaatcaattttgattcaagttattcaaacaatatcaacttataagaatcacttttaaatgagagtgtccaaacataaccaaatttgcattcaactcact 45147281  T
Q  310 tttaaccaaa 319  Q
    ||||||||||    
T  45147280 tttaaccaaa 45147271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 264
Target Start/End: Complemental strand, 3619209 - 3619145
Alignment:
Q  200 attagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcactt 264  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||  | | |||||||||||||    
T  3619209 attatacatttaaaatcaattttgattcaaactatccaaacaacatacattgataagaatcactt 3619145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 187 - 261
Target Start/End: Complemental strand, 38152328 - 38152254
Alignment:
Q  187 ggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatca 261  Q
    ||||| ||| ||||||| || || |||||||||||||||| ||| ||| ||||| ||||||||||||||||||||    
T  38152328 ggatactttggtcattacacgttcaaaatcaattttgatttaaagtatccaaaccacatcaactcataagaatca 38152254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 288
Target Start/End: Original strand, 26125519 - 26125628
Alignment:
Q  179 aattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtat 278  Q
    ||||| || |||| ||| ||||||| ||||| |||||||||||||||| ||||  | ||||||  |||||||||||||||||| || ||    |||||||    
T  26125519 aattaaaaagatattttcgtcattacacattcaaaatcaattttgatttaaaccgtccaaacattatcaactcataagaatcatttttacattagtgtat 26125618  T
Q  279 ccaaacataa 288  Q
    ||||||||||    
T  26125619 ccaaacataa 26125628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 190 - 321
Target Start/End: Complemental strand, 34343002 - 34342873
Alignment:
Q  190 taatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaac-ataa 288  Q
    |||||| ||||||| || || |||||||||||||||||||| ||| ||||||||||| ||| ||||||||||||| ||   || | ||||||||| | ||    
T  34343002 taatttggtcattacac-ttcaaaatcaattttgattcaaattatccaaacaacatccact-ataagaatcacttttaaataaatttatccaaacaaaaa 34342905  T
Q  289 tctattcacattcaactcacttttaaccaaaat 321  Q
    || ||||| | || |||||||||||||||||||    
T  34342904 tcaattcata-tctactcacttttaaccaaaat 34342873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 215 - 288
Target Start/End: Original strand, 11126499 - 11126572
Alignment:
Q  215 tcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacataa 288  Q
    |||||||||||||||||||| |||||||||  ||||||| | |||||||| |    ||||||||||||||||||    
T  11126499 tcaattttgattcaaactatccaaacaacacaaactcatgaaaatcacttatttataagtgtatccaaacataa 11126572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 200 - 245
Target Start/End: Complemental strand, 24297732 - 24297687
Alignment:
Q  200 attagacatttaaaatcaattttgattcaaactattcaaacaacat 245  Q
    |||| |||| ||||||||||||||||||||||||| ||||||||||    
T  24297732 attatacatgtaaaatcaattttgattcaaactatccaaacaacat 24297687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 275 - 325
Target Start/End: Original strand, 19649229 - 19649280
Alignment:
Q  275 gtatccaaacataa-tctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||||||||||||| ||  || ||||||||||||||||||||||||||||||    
T  19649229 gtatccaaacataaatcactttacattcaactcacttttaaccaaaatcaat 19649280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 252 - 325
Target Start/End: Original strand, 26490953 - 26491027
Alignment:
Q  252 ataagaatcacttctag-taaagtgtatccaaacataa-tctattcacattcaactcacttttaaccaaaatcaat 325  Q
    ||||||||||||||||  ||||| ||||||||||| || || ||| ||| ||||||||||||||||||||||||||    
T  26490953 ataagaatcacttctatataaag-gtatccaaacacaaatcaatttacactcaactcacttttaaccaaaatcaat 26491027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 245
Target Start/End: Original strand, 41408168 - 41408203
Alignment:
Q  210 taaaatcaattttgattcaaactattcaaacaacat 245  Q
    ||||||||||||||||| ||||||||||||||||||    
T  41408168 taaaatcaattttgatttaaactattcaaacaacat 41408203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 325
Target Start/End: Complemental strand, 10552962 - 10552924
Alignment:
Q  287 aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||| ||| ||||||||||||||||||||||||||||||    
T  10552962 aatcaatttacattcaactcacttttaaccaaaatcaat 10552924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 244
Target Start/End: Original strand, 26243065 - 26243103
Alignment:
Q  206 catttaaaatcaattttgattcaaactattcaaacaaca 244  Q
    |||| |||||||||||||||||||||||| |||||||||    
T  26243065 cattcaaaatcaattttgattcaaactatccaaacaaca 26243103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 325
Target Start/End: Complemental strand, 30759358 - 30759320
Alignment:
Q  287 aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||| |||||||| |||||||||||||||||||||||||    
T  30759358 aatcaattcacatccaactcacttttaaccaaaatcaat 30759320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 241
Target Start/End: Complemental strand, 37458449 - 37458403
Alignment:
Q  195 tagtcattagacatttaaaatcaattttgattcaaactattcaaaca 241  Q
    |||| |||| ||||| |||||||||||||||||||||||| ||||||    
T  37458449 tagtaattatacattcaaaatcaattttgattcaaactatccaaaca 37458403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 150
Target Start/End: Complemental strand, 25698190 - 25698153
Alignment:
Q  113 aaatccatttatgattttagataagtttaaataattat 150  Q
    |||| |||||||||||||||||||||| ||||||||||    
T  25698190 aaattcatttatgattttagataagttcaaataattat 25698153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 325
Target Start/End: Original strand, 26243129 - 26243218
Alignment:
Q  237 aaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacat-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    ||||| || ||||||||||||||||||| ||   || | ||||||||||| |||| ||||| ||  |||||||||||||| |||||||||    
T  26243129 aaacatcaccaactcataagaatcacttttaaacaattatatccaaacataaatcaattcatatcaaactcacttttaacaaaaatcaat 26243218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 261
Target Start/End: Original strand, 42600490 - 42600558
Alignment:
Q  193 tttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatca 261  Q
    |||||| ||||  |||| ||||||||||||||| |||  |||||||||||||| || | ||||||||||    
T  42600490 tttagtaattatgcattcaaaatcaattttgatccaagttattcaaacaacatgaatttataagaatca 42600558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 97; Significance: 1e-47; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 178 - 325
Target Start/End: Complemental strand, 44967549 - 44967401
Alignment:
Q  178 taattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgta 277  Q
    |||||| ||||||||||| ||||||| | | | |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| |||||||||    
T  44967549 taattaaaaggataatttggtcattacaaactcaaaatcaattttgattcaaattatccaaacaacatcaactcataagaatcacttctattaaagtgta 44967450  T
Q  278 tccaaacat-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    | ||||||| |||| ||||||||||||||||||||||||||||||||||    
T  44967449 ttcaaacataaatcaattcacattcaactcacttttaaccaaaatcaat 44967401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 185 - 325
Target Start/End: Original strand, 3342756 - 3342897
Alignment:
Q  185 aaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaac 284  Q
    ||||||| ||| ||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  3342756 aaggatagtttggtcattacatattcaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctattaaagtgtatccaaac 3342855  T
Q  285 at-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    || |||| ||||| || ||||||||||||||| |||||||||    
T  3342856 ataaatcaattcatatccaactcacttttaactaaaatcaat 3342897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 187 - 325
Target Start/End: Original strand, 38230036 - 38230175
Alignment:
Q  187 ggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacat 286  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| || | ||||||||| || |||| |||||||||||||    
T  38230036 ggatagtttagtcattacacatttaaaatcaattttgattcaaactatccaaacaacatcaacccacatgaatcacttttaataaaatgtatccaaacat 38230135  T
Q  287 -aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
     |||| ||||||||||||||||||||||||||||||||||    
T  38230136 aaatcaattcacattcaactcacttttaaccaaaatcaat 38230175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 179 - 325
Target Start/End: Original strand, 37639390 - 37639537
Alignment:
Q  179 aattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtat 278  Q
    ||||| ||||||| ||||||||||| ||||||||||| |||||||||||||||||| |||||||||||||| || ||||||||||| || |||||| | |    
T  37639390 aattaaaaggatagtttagtcattacacatttaaaattaattttgattcaaactatccaaacaacatcaacccacaagaatcacttttaataaagtttct 37639489  T
Q  279 ccaaacat-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||||||| |||| |||||||||||| |||||||||||||||||||||    
T  37639490 ccaaacataaatcaattcacattcaattcacttttaaccaaaatcaat 37639537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 119 - 325
Target Start/End: Original strand, 9456001 - 9456211
Alignment:
Q  119 atttatgattttagataagtttaaataattattttaattcagaatgaaatatttagttttaa------ttataaggataatttagtcattagacatttaa 212  Q
    ||||||||| ||||||||||| |||||||||| | || | | |||||  |||||||||||||      ||| || |||||||| ||||||  ||||| ||    
T  9456001 atttatgatattagataagttaaaataattatctaaaatgaaaatga--tatttagttttaaatacaattaaaaagataatttggtcattttacattcaa 9456098  T
Q  213 aatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacataatctattcacattcaactcactttt 312  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||   |||||||||||||||||||| ||| || |  |||||||||||    
T  9456099 aatcaattttgattcaaactatccaaacaagatcaactcataagaatcacttttaaacaagtgtatccaaacataatcaatttacctcaaactcactttt 9456198  T
Q  313 aaccaaaatcaat 325  Q
    |||||||||||||    
T  9456199 aaccaaaatcaat 9456211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 193 - 325
Target Start/End: Complemental strand, 10372093 - 10371960
Alignment:
Q  193 tttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacat-aatct 291  Q
    |||||||||||  |||| |||||||||||||||||||||||| | |||||||||||| || |||||||||||||| |||| |||| |||||||| ||||     
T  10372093 tttagtcattacgcattcaaaatcaattttgattcaaactatccgaacaacatcaacccacaagaatcacttctaataaactgtaaccaaacataaatca 10371994  T
Q  292 attcacattcaactcacttttaaccaaaatcaat 325  Q
    ||||||||||||||||||||||||||||||||||    
T  10371993 attcacattcaactcacttttaaccaaaatcaat 10371960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 179 - 325
Target Start/End: Complemental strand, 39391286 - 39391139
Alignment:
Q  179 aattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtat 278  Q
    ||||| ||||||| ||  ||||||| || || |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||  |||||||||    
T  39391286 aattaaaaggatagttaggtcattacacgttcaaaatcaattttgattcaaactattcaaacaacatcaattcataagaatcacttgtaagaaagtgtat 39391187  T
Q  279 ccaaacat-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||||||| |||| |||||| |  ||||||||||||||||||||||||    
T  39391186 ccaaacataaatcaattcacctcaaactcacttttaaccaaaatcaat 39391139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 179 - 325
Target Start/End: Original strand, 47021879 - 47022026
Alignment:
Q  179 aattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtat 278  Q
    ||||| || |||||||| ||||||  ||||| |||||||||||| ||||||| ||| ||||||||||||| || |||||||||| |||||||||||||||    
T  47021879 aattaaaatgataatttggtcattgcacattcaaaatcaattttcattcaaattatccaaacaacatcaattcgtaagaatcacatctagtaaagtgtat 47021978  T
Q  279 ccaaacat-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||||||| |||| |||||| ||||||| |||||||||||||||||||    
T  47021979 ccaaacataaatcaattcactttcaacttacttttaaccaaaatcaat 47022026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 178 - 325
Target Start/End: Original strand, 48459669 - 48459817
Alignment:
Q  178 taattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgta 277  Q
    |||||| ||||||| ||| ||||||| ||| |||||||||||||| || || ||||| ||||||||||| | ||||||||||||||| ||   |||||||    
T  48459669 taattaaaaggatagtttggtcattacacacttaaaatcaattttaatacatactatccaaacaacatccattcataagaatcacttttaagtaagtgta 48459768  T
Q  278 tccaaacat-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  48459769 tccaaacataaatcaattcacattcaactcacttttaaccaaaatcaat 48459817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 179 - 325
Target Start/End: Complemental strand, 3622609 - 3622462
Alignment:
Q  179 aattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtat 278  Q
    ||||| ||||||| |||  || ||| |||||||||||||||||||||| | ||||| |||||||||||||||| |||||||||||| ||   ||||||||    
T  3622609 aattaaaaggatactttgatcgttacacatttaaaatcaattttgatttatactatccaaacaacatcaactcgtaagaatcacttttaagtaagtgtat 3622510  T
Q  279 ccaaacat-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||||||| |||| |||||||| |||||||||||||||||||||||||    
T  3622509 ccaaacataaatcaattcacatccaactcacttttaaccaaaatcaat 3622462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 179 - 325
Target Start/End: Original strand, 3750647 - 3750793
Alignment:
Q  179 aattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtat 278  Q
    ||||| ||||||| ||| ||||||| ||||| ||||| |||||||||| ||||||| ||||||||||||| |||||||| ||| || || ||||||||||    
T  3750647 aattaaaaggatagtttggtcattacacatt-aaaattaattttgatttaaactatccaaacaacatcaattcataagattcaattatattaaagtgtat 3750745  T
Q  279 ccaaacat-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||||||| |||| |||||||| |||||||||||||||||||||||||    
T  3750746 ccaaacataaatcaattcacatccaactcacttttaaccaaaatcaat 3750793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 180 - 325
Target Start/End: Original strand, 37562531 - 37562677
Alignment:
Q  180 attataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatc 279  Q
    |||| ||||||| ||| ||||||| ||||  |||||||||||| ||||||||||| ||||||||||||||||||| ||||||||| ||   |||||||||    
T  37562531 attaaaaggatagtttggtcattacacatacaaaatcaattttcattcaaactatccaaacaacatcaactcatatgaatcacttttaaataagtgtatc 37562630  T
Q  280 caaacat-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    ||||||| |||| |||||||| ||||||||||||||| |||||||||    
T  37562631 caaacataaatcaattcacatccaactcacttttaacaaaaatcaat 37562677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 112 - 325
Target Start/End: Complemental strand, 34366203 - 34365984
Alignment:
Q  112 aaaatccatttatgattttagataagtttaaataattattttaattcagaatgaaatatttagttttaa------ttataaggataatttagtcattaga 205  Q
    ||||| ||||||||||||||||||| || |||| ||||| | |||| ||||||| ||||||| ||||||      ||| |||| |||||| |||||||      
T  34366203 aaaattcatttatgattttagataaattcaaatgattatctaaattaagaatgagatatttaattttaaacacagttaaaagggtaatttggtcattacg 34366104  T
Q  206 catttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacat-aatctattcacattcaac 304  Q
    | || |||||||||||| ||||||||||| |||||||||||||||||||| |||||||| || | ||| |||||||||||| |||| |||||||  ||||    
T  34366103 ccttcaaaatcaatttttattcaaactatccaaacaacatcaactcataaaaatcacttttaat-aagcgtatccaaacataaatcaattcacacccaac 34366005  T
Q  305 tcacttttaaccaaaatcaat 325  Q
    | ||||||||| |||||||||    
T  34366004 taacttttaactaaaatcaat 34365984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 185 - 325
Target Start/End: Complemental strand, 386624 - 386483
Alignment:
Q  185 aaggataatttagtcattagacatttaaaa-tcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaa 283  Q
    ||||||||||| ||||||| |||||||||| ||||||||||||||| |||| ||||||||||||| ||||||||||||||| | |   ||| ||||||||    
T  386624 aaggataatttggtcattatacatttaaaaatcaattttgattcaatctatccaaacaacatcaa-tcataagaatcacttttcggttagtatatccaaa 386526  T
Q  284 cat-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    ||| |||| ||||||||||| || |||||||||||||||||||    
T  386525 cataaatcaattcacattcagctaacttttaaccaaaatcaat 386483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 179 - 322
Target Start/End: Complemental strand, 12632232 - 12632088
Alignment:
Q  179 aattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtat 278  Q
    ||||| ||||||| ||| ||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||    |||  |     
T  12632232 aattaaaaggatattttggtcattacacattcaaaatcaattttgattcaaacaattcaaacaacatcaactcataagaatcacttttaagcgagtacac 12632133  T
Q  279 ccaaacat-aatctattcacattcaactcacttttaaccaaaatc 322  Q
     ||||||| |||| ||||||||  |||||||||||||||||||||    
T  12632132 tcaaacataaatcaattcacatctaactcacttttaaccaaaatc 12632088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 178 - 325
Target Start/End: Original strand, 34010299 - 34010446
Alignment:
Q  178 taattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgta 277  Q
    |||||| |||| |||||| ||||||  |  || ||||| |||||||||||||||||| ||||||||||||||||||||||| ||||| ||    ||||||    
T  34010299 taattaaaagggtaatttggtcatttaatgttcaaaattaattttgattcaaactatccaaacaacatcaactcataagaaccacttttaaatgagtgta 34010398  T
Q  278 tccaaacataatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    | |||||||||||  |||| || |||||||||||||||||||||||||    
T  34010399 ttcaaacataatcagttcatatccaactcacttttaaccaaaatcaat 34010446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 179 - 325
Target Start/End: Original strand, 48134540 - 48134686
Alignment:
Q  179 aattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtat 278  Q
    ||||| |||||||| |  ||||||| ||||| |||||||||||||||||||||||| ||||||||||||||| |||| |||||||| ||   |||| |||    
T  48134540 aattacaaggataactaggtcattacacattcaaaatcaattttgattcaaactatccaaacaacatcaacttataaaaatcacttttaaacaagtttat 48134639  T
Q  279 ccaaacataatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||||||||||| |||| | |  ||| |||||||||| |||||||||    
T  48134640 ccaaacataatcaattctcctcaaacccacttttaacaaaaatcaat 48134686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 178 - 263
Target Start/End: Complemental strand, 47301707 - 47301622
Alignment:
Q  178 taattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcact 263  Q
    |||||| ||||||||||||||||||  ||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  47301707 taattaaaaggataatttagtcattttacattcaaaatcaattttgattcaaactatccaaacaacatcaacccataagaatcact 47301622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 178 - 325
Target Start/End: Original strand, 42740351 - 42740499
Alignment:
Q  178 taattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgta 277  Q
    |||||| || |||| ||| ||||||| ||| ||||||||||||||||| || ||||| ||||||| |||||| |||||||||||||| ||   |||| ||    
T  42740351 taattaaaatgatactttggtcattacacacttaaaatcaattttgatacatactatccaaacaatatcaacacataagaatcacttttaagtaagtata 42740450  T
Q  278 tccaaacat-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    || |||||| |||| ||| |||||||||| |||||||||||||||||||    
T  42740451 tctaaacataaatcaattaacattcaacttacttttaaccaaaatcaat 42740499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 178 - 325
Target Start/End: Complemental strand, 47217691 - 47217543
Alignment:
Q  178 taattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgta 277  Q
    |||||| ||||||||||||||||||  || || |||||||||||| ||||||||||| |||||||||||||| ||| | |||||||| ||    |||| |    
T  47217691 taattaaaaggataatttagtcattgtacgttcaaaatcaattttaattcaaactatccaaacaacatcaacccatcaaaatcacttttaagcgagtgca 47217592  T
Q  278 tccaaacat-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    ||||||||| |||| ||||||||  ||||||||||||| ||||||||||    
T  47217591 tccaaacataaatcaattcacatcaaactcacttttaatcaaaatcaat 47217543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 179 - 325
Target Start/End: Complemental strand, 43738088 - 43737941
Alignment:
Q  179 aattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtat 278  Q
    ||||| |||| |||||| ||||||  ||||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||   |||| |||    
T  43738088 aattaaaaggttaatttggtcatttcacattcaaaatcaattttgattcaaactatccaaacaacatccactcataagaatcacttttaaataagtttat 43737989  T
Q  279 ccaaac-ataatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||||| | |||| ||||| ||  |||| |||||||| ||||||||||    
T  43737988 ccaaacaaaaatcaattcatatctaactaacttttaatcaaaatcaat 43737941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 200 - 325
Target Start/End: Complemental strand, 43631823 - 43631698
Alignment:
Q  200 attagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacataatctattcacat 299  Q
    |||| ||||| | |||||||||||||||||  ||| ||||||| ||||||||| ||||||||||| || | |||  ||||||||||||||| ||||| ||    
T  43631823 attatacattcacaatcaattttgattcaatatatccaaacaatatcaactcaaaagaatcacttttaattaagcatatccaaacataatcaattcatat 43631724  T
Q  300 tcaactcacttttaaccaaaatcaat 325  Q
      ||||||||||||||||||||||||    
T  43631723 ctaactcacttttaaccaaaatcaat 43631698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 179 - 321
Target Start/End: Original strand, 3375450 - 3375593
Alignment:
Q  179 aattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtat 278  Q
    ||||| ||||||||||| ||||||  ||||| ||||||||||||||| ||||  || ||||||||||| ||||||||||||||||| ||    |||||||    
T  3375450 aattaaaaggataatttggtcattgcacattcaaaatcaattttgatccaaatcatccaaacaacatcgactcataagaatcacttttaagtgagtgtat 3375549  T
Q  279 ccaaaca-taatctattcacattcaactcacttttaaccaaaat 321  Q
    |||||||  |||| |||||||   ||||||||||||||||||||    
T  3375550 ccaaacacaaatcaattcacaccaaactcacttttaaccaaaat 3375593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 112 - 325
Target Start/End: Original strand, 32205812 - 32206032
Alignment:
Q  112 aaaatccatttatgattttagataagtttaaataattattttaattcagaat-gaaatatttagttttaattataa------ggataatttagtcattag 204  Q
    ||||| ||||||| | |||||||||| | ||||||||||   || | ||||| ||||||||||||||||| || ||      || |||||| |||||| |    
T  32205812 aaaatgcatttataactttagataagctgaaataattatccaaaatgagaattgaaatatttagttttaaataaaatttaaaggttaatttggtcatttg 32205911  T
Q  205 -acatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacat-aatctattcacattca 302  Q
     |||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||| ||   |||||||||||||||| |||| ||||||||  |    
T  32205912 cacatttaaaatcaattttgattcatacta-tcaaacaacat-aactcataagaatcacttttaagtaagtgtatccaaacataaatcaattcacatcaa 32206009  T
Q  303 actcacttttaaccaaaatcaat 325  Q
    || |||||||||  |||||||||    
T  32206010 acccacttttaattaaaatcaat 32206032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 231 - 325
Target Start/End: Complemental strand, 37008447 - 37008353
Alignment:
Q  231 ctattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacataatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||| ||||||||||||||||||||||||||||| ||  ||||||| |||||||||||   | |||| |  ||||||||||||||||||||||||    
T  37008447 ctatccaaacaacatcaactcataagaatcacttataagaaagtgtctccaaacataaatcaatcacctcaaactcacttttaaccaaaatcaat 37008353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 185 - 325
Target Start/End: Original strand, 46541566 - 46541707
Alignment:
Q  185 aaggataatttagtcattagacattt-aaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaa 283  Q
    ||||||||||| ||||||| |||||| ||||||||||||||||||| ||||  |||||| ||||| ||||||||||||||| | |   | | ||  ||||    
T  46541566 aaggataatttggtcattatacatttaaaaatcaattttgattcaatctatcaaaacaatatcaa-tcataagaatcacttttcggtgaatatactcaaa 46541664  T
Q  284 cat-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    ||| || | ||||||||||||||||||| ||||||||||||||    
T  46541665 cataaaccaattcacattcaactcacttctaaccaaaatcaat 46541707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 211 - 300
Target Start/End: Original strand, 19095929 - 19096017
Alignment:
Q  211 aaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacataatctattcacatt 300  Q
    |||||||||||||||||||| ||| |||||||||| ||||||||||||||| || ||    ||||||||||||||||| | |||||||||    
T  19095929 aaaatcaattttgattcaaattatccaaacaacat-aactcataagaatcatttttaaacgagtgtatccaaacataaccaattcacatt 19096017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 211 - 325
Target Start/End: Original strand, 1766417 - 1766532
Alignment:
Q  211 aaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttcta-gtaaagtgtatccaaacat-aatctattcacattcaactcac 308  Q
    |||||||||||| ||||||| |||||||||| |||||| | ||||||||||||| || || ||| ||||||||| || |||| ||| |  ||||||||||    
T  1766417 aaaatcaattttaattcaaattattcaaacatcatcaattgataagaatcacttttatgttaag-gtatccaaatataaatcaatttaggttcaactcac 1766515  T
Q  309 ttttaaccaaaatcaat 325  Q
    |||||| ||||||||||    
T  1766516 ttttaatcaaaatcaat 1766532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 325
Target Start/End: Complemental strand, 36920293 - 36920180
Alignment:
Q  213 aatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacat-aatctattcacattcaactcacttt 311  Q
    |||||||||||||||||  ||  ||||||||||||||||| ||||||||| | || | ||  |||| ||||||| |||| ||| | ||  ||||||||||    
T  36920293 aatcaattttgattcaatgtacccaaacaacatcaactcaaaagaatcacctttaattaaacgtattcaaacataaatcaatttatatctaactcacttt 36920194  T
Q  312 taaccaaaatcaat 325  Q
    ||||||||||||||    
T  36920193 taaccaaaatcaat 36920180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 325
Target Start/End: Complemental strand, 39634287 - 39634167
Alignment:
Q  206 catttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagta-aagtgtatccaaacataa-tctattcacattcaa 303  Q
    |||| ||||||||||||||| |||  ||| |||||||||  || | ||||||||||||| |  |  |||| ||||||||||||| || ||||| ||||||    
T  39634287 cattcaaaatcaattttgatccaagttatccaaacaacaagaatttataagaatcacttttgttttaagt-tatccaaacataaatcaattcatattcaa 39634189  T
Q  304 ctcacttttaaccaaaatcaat 325  Q
    ||||||||||||||||||||||    
T  39634188 ctcacttttaaccaaaatcaat 39634167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 211 - 325
Target Start/End: Original strand, 32186932 - 32187047
Alignment:
Q  211 aaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacat-aatctattcacattcaactcact 309  Q
    |||||||||||| || ||| |||| ||||||||||||| ||||| |||| |||| ||    |||| |||||||||| |||| ||| ||||  ||||||||    
T  32186932 aaaatcaattttaatccaatctatccaaacaacatcaattcatatgaattacttttaaatgagtgcatccaaacataaatcaatttacatctaactcact 32187031  T
Q  310 tttaaccaaaatcaat 325  Q
    ||||| ||||||||||    
T  32187032 tttaatcaaaatcaat 32187047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 211 - 325
Target Start/End: Original strand, 41715649 - 41715764
Alignment:
Q  211 aaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacat-aatctattcacattcaactcact 309  Q
    |||||||||||| || ||| |||| ||||||||||||| ||||| |||| |||| ||    |||| |||||||||| |||| ||| ||||  ||||||||    
T  41715649 aaaatcaattttaatccaatctatccaaacaacatcaattcatatgaattacttttaaatgagtgcatccaaacataaatcaatttacatctaactcact 41715748  T
Q  310 tttaaccaaaatcaat 325  Q
    ||||| ||||||||||    
T  41715749 tttaatcaaaatcaat 41715764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 275 - 325
Target Start/End: Complemental strand, 42752244 - 42752193
Alignment:
Q  275 gtatccaaacataa-tctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||||||||||||| || |||||||||||||||||||||||| |||||||||    
T  42752244 gtatccaaacataaatcaattcacattcaactcacttttaacaaaaatcaat 42752193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 207 - 244
Target Start/End: Complemental strand, 37886891 - 37886854
Alignment:
Q  207 atttaaaatcaattttgattcaaactattcaaacaaca 244  Q
    |||||||||||||||||||||||||||| |||||||||    
T  37886891 atttaaaatcaattttgattcaaactatccaaacaaca 37886854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 264
Target Start/End: Complemental strand, 34011093 - 34011025
Alignment:
Q  197 gtcattagacatttaaaatcaattttgattcaaactattc-aaacaacatcaactcataagaatcactt 264  Q
    ||||||| || || |||||||||||||||| ||| ||  | ||||||||||||||||||||||||||||    
T  34011093 gtcattacacgttcaaaatcaattttgatttaaagtaccccaaacaacatcaactcataagaatcactt 34011025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 325
Target Start/End: Original strand, 38494291 - 38494323
Alignment:
Q  293 ttcacattcaactcacttttaaccaaaatcaat 325  Q
    |||||||||||||||||||||||||||||||||    
T  38494291 ttcacattcaactcacttttaaccaaaatcaat 38494323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 325
Target Start/End: Original strand, 42904540 - 42904660
Alignment:
Q  206 catttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacat-aatctattcacattcaac 304  Q
    |||||||||  |||||||||| ||| ||| ||||||| || || ||||||||||||||| ||    |||||||| |||||| |||| ||||||||  |||    
T  42904540 catttaaaagtaattttgatttaaaatatacaaacaaaattaattcataagaatcacttttaaacgagtgtatcaaaacataaatcaattcacatctaac 42904639  T
Q  305 tcacttttaaccaaaatcaat 325  Q
    ||| ||||| |||||| ||||    
T  42904640 tcatttttatccaaaaacaat 42904660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 325
Target Start/End: Original strand, 4228538 - 4228654
Alignment:
Q  210 taaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctag--taaagtgtatccaaacataa-tctattcacattcaactc 306  Q
    ||||| |||||||||  |||| |||||||||||||||   ||||| ||||||||||||   ||||| |||||||||||||| ||  ||  ||||||||||    
T  4228538 taaaagcaattttgacacaaaatattcaaacaacatctt-tcatatgaatcacttctatcttaaag-gtatccaaacataaatcacttttcattcaactc 4228635  T
Q  307 acttttaaccaaaatcaat 325  Q
    |||||||| ||||||||||    
T  4228636 acttttaatcaaaatcaat 4228654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 325
Target Start/End: Complemental strand, 40903284 - 40903170
Alignment:
Q  211 aaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacataatctattcacattcaactcactt 310  Q
    ||||||||||||||||  |||||| |||||||||| || | |||| |||||||| || |  | | ||||||||||||| | | | |  ||||||||||||    
T  40903284 aaaatcaattttgatttgaactatccaaacaacatgaattgataaaaatcacttttactttaatatatccaaacataaaccaattaagttcaactcactt 40903185  T
Q  311 ttaaccaaaatcaat 325  Q
    |||  ||||||||||    
T  40903184 ttaggcaaaatcaat 40903170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 325
Target Start/End: Original strand, 7169018 - 7169047
Alignment:
Q  296 acattcaactcacttttaaccaaaatcaat 325  Q
    ||||||||||||||||||||||||||||||    
T  7169018 acattcaactcacttttaaccaaaatcaat 7169047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 325
Target Start/End: Complemental strand, 24771026 - 24770913
Alignment:
Q  213 aatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacataa-tctattcacattcaactcacttt 311  Q
    ||||||||||||   ||| ||| |||||||||| || | |||| |||||||| ||||   || |||| ||| |||| || ||| |||| |||||||||||    
T  24771026 aatcaattttgacaaaaattatccaaacaacataaattgataaaaatcacttttagttttgtatatctaaatataaatcaatttacatccaactcacttt 24770927  T
Q  312 taaccaaaatcaat 325  Q
    ||||||||||||||    
T  24770926 taaccaaaatcaat 24770913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 4035908 - 4035960
Alignment:
Q  193 tttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacat 245  Q
    |||||| |||| ||||| |||| ||||||||||| ||||||| ||||||||||    
T  4035908 tttagtaattatacattcaaaagcaattttgattaaaactatccaaacaacat 4035960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 248
Target Start/End: Original strand, 43581616 - 43581664
Alignment:
Q  200 attagacatttaaaatcaattttgattcaaactattcaaacaacatcaa 248  Q
    |||| |||| ||||| ||||||| ||||||||||| |||||||||||||    
T  43581616 attacacatctaaaagcaattttaattcaaactatccaaacaacatcaa 43581664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 88; Significance: 3e-42; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 175 - 325
Target Start/End: Original strand, 8384 - 8535
Alignment:
Q  175 ttttaattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagt 274  Q
    ||||||||| ||||||||||| ||||||  ||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||| || ||  |||||    
T  8384 ttttaattaaaaggataatttggtcattgtacattcaaaatcaattttgattcaaactatccaaacaacatcaactcataaaaatcatttttaaaaaagt 8483  T
Q  275 gtatccaaacat-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||||||||||| |||| ||||||||  ||||||||||||||||||||||||    
T  8484 gtatccaaacataaatcaattcacatcaaactcacttttaaccaaaatcaat 8535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 180 - 325
Target Start/End: Original strand, 9051 - 9196
Alignment:
Q  180 attataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcac-ttctagtaaagtgtat 278  Q
    |||| ||||||||||||||||||| ||||| |||||||||||| ||||||||||| ||||||||||| ||||||||||||||| ||| |||  |||||||    
T  9051 attaaaaggataatttagtcattatacattcaaaatcaattttaattcaaactatccaaacaacatctactcataagaatcactttcaagt-gagtgtat 9149  T
Q  279 ccaaacataatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||||||||  | ||||| ||  ||||||||||||| ||||||||||    
T  9150 ccaaacatatacaattcatatctaactcacttttaatcaaaatcaat 9196  T

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Target: scaffold0394 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 185 - 325
Target Start/End: Complemental strand, 5987 - 5845
Alignment:
Q  185 aaggataatttagtcattagacatttaaaatcaattttgattcaaa-----ctattcaaacaacatcaactcataagaatcacttctagtaaagtgtatc 279  Q
    ||||||| ||||||||||| ||||| ||||||||||||||||||||     |||| |||||||||||||| || |||||||||||||| ||||  |||      
T  5987 aaggatagtttagtcattacacattcaaaatcaattttgattcaaattaaactatccaaacaacatcaacccacaagaatcacttctaataaacggtaat 5888  T
Q  280 caaacataatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    ||||||| |   ||||||||||||||||||||||||||||||||||    
T  5887 caaacatca---attcacattcaactcacttttaaccaaaatcaat 5845  T

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Target: scaffold0005 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 185 - 325
Target Start/End: Original strand, 253073 - 253214
Alignment:
Q  185 aaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttct-agtaaagtgtatccaaa 283  Q
    |||||||| || ||||||| | ||| ||||||||||||||||||| |||| |||||||||| |||||||||||||||||| | | | ||| |||||||||    
T  253073 aaggataagttggtcattatatattcaaaatcaattttgattcaatctatccaaacaacattaactcataagaatcacttttaactgaag-gtatccaaa 253171  T
Q  284 cat-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    ||| |||| ||||| || |||||||| ||||||||||||||||    
T  253172 cataaatcaattcatatccaactcacatttaaccaaaatcaat 253214  T

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Target: scaffold0983 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0983
Description:

Target: scaffold0983; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 176 - 325
Target Start/End: Complemental strand, 2433 - 2283
Alignment:
Q  176 tttaattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtg 275  Q
    |||||||| ||||||||||| ||||||| | ||  ||||||||||||||||||||||||  ||||||| ||||||  ||| || ||||| ||   |||||    
T  2433 tttaattaaaaggataatttggtcattacatatccaaaatcaattttgattcaaactatctaaacaacgtcaacttgtaaaaaccacttttaaacaagtg 2334  T
Q  276 tatccaaacat-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    | ||||||||| |||| |||||| |  ||||||||||||||||||||||||    
T  2333 tgtccaaacataaatcaattcacctcaaactcacttttaaccaaaatcaat 2283  T

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Target: scaffold0217 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 325
Target Start/End: Complemental strand, 2189 - 2042
Alignment:
Q  179 aattataaggataatttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtat 278  Q
    ||||| ||||||||||  ||| ||| | ||| |||||||||||||| | ||||||| |||||||||||||  ||| | |||||||| ||    |||| ||    
T  2189 aattaaaaggataattcggtctttatatattcaaaatcaattttgacttaaactatccaaacaacatcaagccatgataatcacttttatatgagtgcat 2090  T
Q  279 ccaaacat-aatctattcacattcaactcacttttaaccaaaatcaat 325  Q
    |||||||| |||| ||||| ||  |||||| ||| |||||||||||||    
T  2089 ccaaacataaatcaattcatatcaaactcattttgaaccaaaatcaat 2042  T

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Target: scaffold0184 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 245
Target Start/End: Complemental strand, 9306 - 9254
Alignment:
Q  193 tttagtcattagacatttaaaatcaattttgattcaaactattcaaacaacat 245  Q
    |||||| |||| |||||||||||||||||||||  ||||||| ||||||||||    
T  9306 tttagtaattatacatttaaaatcaattttgatcaaaactatccaaacaacat 9254  T

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Target: scaffold0041 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 325
Target Start/End: Original strand, 46734 - 46848
Alignment:
Q  211 aaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacataatctattcacattcaactcactt 310  Q
    ||||||||||||||||  |||||| |||||||||| || | |||| |||||||| || |  | | ||||||||||||| | | | |  ||||||||||||    
T  46734 aaaatcaattttgatttgaactatccaaacaacatgaattgataaaaatcacttttactttaatatatccaaacataaaccaattaagttcaactcactt 46833  T
Q  311 ttaaccaaaatcaat 325  Q
    |||  ||||||||||    
T  46834 ttaggcaaaatcaat 46848  T

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