View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17734_high_12 (Length: 386)
Name: NF17734_high_12
Description: NF17734
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17734_high_12 |
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Alignment Details
Target: chr7 (Bit Score: 360; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 360; E-Value: 0
Query Start/End: Original strand, 1 - 368
Target Start/End: Original strand, 43374329 - 43374696
Alignment:
| Q |
1 |
aaaagtaagagaaagagacacatacatgaaaaagattgaaagcgatttcccacggatgaaacaacacattgtctttgttgtaaccattgagattacaaag |
100 |
Q |
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| T |
43374329 |
aaaagtaagagaaagagacacatacatgaaaaagattgaaagcgatttcccacggatgaaacaacacattgtctttgttgtaaccattgagattacaaag |
43374428 |
T |
|
| Q |
101 |
atgatgaaattcttcatcaaaatttacgacgaaaccagcagaaaagtcgtcgtattccatgacagcctctcttgtgaaatttcttgcgacggagcctcgt |
200 |
Q |
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| T |
43374429 |
atgatgaaattcttcatcaaaatttacgacgaaaccagcagaaaagtcgtcgtattccatgacagcctctcttgtgaaatttcttgcgacggagcctcgt |
43374528 |
T |
|
| Q |
201 |
cgcaaggaataaagtgttgacttaggacctttccatttaacctgaatcgctaattttgaagaagattgacgtataggattgcatccaatgagtttcttta |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43374529 |
cgcaaggaataaagtgttgacttaggacctttccatttaacttgaatcgctaattttgaagaagattgacgtataggattgcatccaatgagtttcttta |
43374628 |
T |
|
| Q |
301 |
tattaagcctgacgtgatactttttggtgacgagtggcggccatggtcgccacctcatcatcttcacc |
368 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43374629 |
cattaagcctgacgtgatactttttggtgacgagtggcggccatggtcgccacctcatcatcttcacc |
43374696 |
T |
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