View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17734_high_36 (Length: 226)
Name: NF17734_high_36
Description: NF17734
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17734_high_36 |
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Alignment Details
Target: chr8 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 38273768 - 38273978
Alignment:
| Q |
1 |
ctgaaaataatatctttgagtcaaataataaaaacagtcacaatgctgagattcttcaaacttcaataaagacccttcatgattccaaatgattttatga |
100 |
Q |
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| T |
38273768 |
ctgaaaataatatctttgagtcaaataataaaaacagtcacaatgctgagattcttcaaacttcaataaagacccttcatgattccaaatgattttatga |
38273867 |
T |
|
| Q |
101 |
ataaacaaaattgaagtttaccttactgcccccctttnnnnnnntggcaatctaaggtatactcatgcacaacggtagagactaatttattgagttgcat |
200 |
Q |
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|||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38273868 |
ataaacaaaattgaagtttaccgtactgcccccctttaaaaaaatggcaatctaaggtatactcatgcacaacggtagagactaatttattgagttgcat |
38273967 |
T |
|
| Q |
201 |
gaggttcattt |
211 |
Q |
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| T |
38273968 |
gaggttcattt |
38273978 |
T |
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