View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17737_high_26 (Length: 360)
Name: NF17737_high_26
Description: NF17737
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17737_high_26 |
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| [»] scaffold0096 (1 HSPs) |
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Alignment Details
Target: scaffold0096 (Bit Score: 292; Significance: 1e-164; HSPs: 1)
Name: scaffold0096
Description:
Target: scaffold0096; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 17 - 356
Target Start/End: Original strand, 7318 - 7656
Alignment:
| Q |
17 |
atttgtcaaacctggttttgaatgaactaggggatgcaagcataggttgagctagagcatgatgtggtgacaacataacctagacatgaggtggagcttg |
116 |
Q |
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| T |
7318 |
atttgtcaaacctggttttgaatgaactaggggacgcaagcataggttgagctagagcatgatgtggtgacaacataacctagacatgaggtggagcttg |
7417 |
T |
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| Q |
117 |
atgcggtggtagcataagctgtggaagagcctgaaaggctggtgtaggcataactgaagcaaactgttgtggagctggatgaaactgtggaccgtactga |
216 |
Q |
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| T |
7418 |
atgcggtggtagcataagctgtggaagagcctgaaaggctggtgtaggcataactgaagcaaactgttgtggaggtggatgaaactggggaccgtactga |
7517 |
T |
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| Q |
217 |
tacatggagtaacatttcttccccgaggggagaaaaccattgagacagatgatgaaccaggggaaggaggtggagcctagagaggtttttgaacataaat |
316 |
Q |
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| T |
7518 |
tacgtgaagtaacatttcttccccgaggggagaaaaccattgagacagat-atgaaccaggggaaggaggtggagcctaaagaggtttttgaacataaat |
7616 |
T |
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| Q |
317 |
aggctcaaagtggtgataacatacagactgatgatgtcca |
356 |
Q |
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| T |
7617 |
aggttcaaattggtgatagcatacagactgatcatgtcca |
7656 |
T |
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