View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17737_high_38 (Length: 264)
Name: NF17737_high_38
Description: NF17737
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17737_high_38 |
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Alignment Details
Target: chr1 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 15 - 248
Target Start/End: Original strand, 12079032 - 12079265
Alignment:
| Q |
15 |
taagaaataatcgaaaattctgaagaaggcgatctttacctggcccaggtgatatcagcactcctctcggattttttctgatcaaaataataaaacataa |
114 |
Q |
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| T |
12079032 |
taagaaataatcgaaaattctgaagaaggcgatctttacctggcccaggtgatatcagcactcctctcggattttttctgatcaaaataataaaacataa |
12079131 |
T |
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| Q |
115 |
agcttcttattacatcaggagcttacaaaagtatatatcatcccaaaaacagttttatcaataaggaaaatgattaccttttcaactcctccaccgttag |
214 |
Q |
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|||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12079132 |
agcttcttattacatcaggagcttacgaaagtatatatcatcccaaaaacagtttcatcaataaggaaaatgattaccttttcaactcctccaccgttag |
12079231 |
T |
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| Q |
215 |
ctcgtcatttcggtagacctcaaagtgaactcct |
248 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
12079232 |
ctcgtcatttcggtagacctcaaagtgaactcct |
12079265 |
T |
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