View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17737_high_57 (Length: 226)

Name: NF17737_high_57
Description: NF17737
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17737_high_57
NF17737_high_57
[»] chr5 (23 HSPs)
chr5 (14-155)||(1912526-1912667)
chr5 (159-207)||(33992056-33992104)
chr5 (155-206)||(41817996-41818047)
chr5 (156-206)||(16070272-16070322)
chr5 (156-207)||(19360817-19360868)
chr5 (156-207)||(26602286-26602337)
chr5 (157-207)||(8373600-8373650)
chr5 (159-197)||(33490503-33490541)
chr5 (156-206)||(35419918-35419968)
chr5 (150-207)||(27678487-27678544)
chr5 (159-207)||(24104961-24105009)
chr5 (151-207)||(27421519-27421575)
chr5 (156-207)||(9007292-9007343)
chr5 (156-207)||(19515495-19515546)
chr5 (156-207)||(27025846-27025897)
chr5 (156-207)||(38597158-38597209)
chr5 (161-207)||(31884039-31884085)
chr5 (161-207)||(34708283-34708329)
chr5 (156-197)||(1165052-1165093)
chr5 (150-207)||(35419626-35419683)
chr5 (159-207)||(16736638-16736686)
chr5 (162-197)||(1579704-1579739)
chr5 (162-197)||(1605076-1605111)
[»] chr7 (31 HSPs)
chr7 (150-207)||(4476310-4476367)
chr7 (150-207)||(17754444-17754501)
chr7 (159-207)||(6395934-6395982)
chr7 (151-207)||(43407795-43407851)
chr7 (156-207)||(5281549-5281600)
chr7 (156-207)||(18120693-18120744)
chr7 (155-207)||(33358406-33358458)
chr7 (156-207)||(934162-934213)
chr7 (156-207)||(12097085-12097136)
chr7 (160-207)||(33845868-33845915)
chr7 (156-207)||(38867466-38867517)
chr7 (156-202)||(43157391-43157437)
chr7 (153-194)||(12100477-12100518)
chr7 (156-197)||(42205215-42205256)
chr7 (156-207)||(7164841-7164892)
chr7 (156-207)||(15648618-15648669)
chr7 (160-207)||(32042199-32042246)
chr7 (156-207)||(37004114-37004165)
chr7 (156-206)||(8631583-8631633)
chr7 (160-206)||(16893830-16893876)
chr7 (156-206)||(36890263-36890313)
chr7 (156-206)||(42964103-42964153)
chr7 (155-207)||(24791816-24791868)
chr7 (156-207)||(3512233-3512284)
chr7 (156-207)||(9453434-9453485)
chr7 (156-207)||(25749139-25749190)
chr7 (161-207)||(1803765-1803811)
chr7 (161-207)||(22648923-22648969)
chr7 (153-207)||(30180062-30180116)
chr7 (157-207)||(42674273-42674323)
chr7 (156-206)||(43021059-43021109)
[»] chr3 (36 HSPs)
chr3 (151-207)||(22175447-22175503)
chr3 (156-207)||(15521489-15521540)
chr3 (156-207)||(50529775-50529826)
chr3 (151-207)||(20699977-20700033)
chr3 (155-207)||(29784202-29784254)
chr3 (156-207)||(37697429-37697480)
chr3 (157-207)||(44608809-44608859)
chr3 (150-207)||(12116964-12117021)
chr3 (151-207)||(13697558-13697614)
chr3 (150-206)||(20841668-20841724)
chr3 (155-207)||(29446358-29446410)
chr3 (156-207)||(16355367-16355418)
chr3 (156-207)||(21581890-21581941)
chr3 (160-207)||(35227193-35227240)
chr3 (156-207)||(42307230-42307281)
chr3 (157-207)||(36787444-36787494)
chr3 (161-207)||(49129922-49129968)
chr3 (156-206)||(54533334-54533384)
chr3 (156-197)||(32245041-32245082)
chr3 (156-197)||(42103546-42103587)
chr3 (151-207)||(15517917-15517973)
chr3 (156-207)||(8043523-8043574)
chr3 (156-207)||(26000190-26000241)
chr3 (156-207)||(34701072-34701123)
chr3 (156-207)||(38856746-38856797)
chr3 (156-207)||(38934787-38934838)
chr3 (161-207)||(32360173-32360219)
chr3 (156-197)||(25493724-25493765)
chr3 (162-207)||(46451650-46451695)
chr3 (159-207)||(24835355-24835403)
chr3 (159-195)||(44689683-44689719)
chr3 (156-206)||(52922298-52922348)
chr3 (156-197)||(29785815-29785856)
chr3 (151-192)||(48924513-48924554)
chr3 (162-207)||(53028963-53029008)
chr3 (159-207)||(54869373-54869421)
[»] chr1 (43 HSPs)
chr1 (155-207)||(8078948-8079000)
chr1 (155-207)||(52697500-52697552)
chr1 (156-207)||(51358672-51358723)
chr1 (156-207)||(23323476-23323527)
chr1 (156-207)||(38829967-38830018)
chr1 (156-207)||(46410103-46410154)
chr1 (158-207)||(32672497-32672546)
chr1 (159-207)||(29079344-29079392)
chr1 (156-207)||(1171360-1171411)
chr1 (156-207)||(7146505-7146556)
chr1 (150-193)||(15718540-15718583)
chr1 (156-207)||(20097530-20097581)
chr1 (156-207)||(25898082-25898133)
chr1 (156-207)||(29288948-29288999)
chr1 (156-207)||(39259698-39259749)
chr1 (156-207)||(42369641-42369692)
chr1 (156-197)||(38172618-38172659)
chr1 (156-193)||(52752514-52752551)
chr1 (161-197)||(8121718-8121754)
chr1 (158-206)||(16052993-16053041)
chr1 (157-197)||(26579508-26579548)
chr1 (159-207)||(46761813-46761861)
chr1 (158-197)||(969851-969890)
chr1 (156-207)||(1168710-1168761)
chr1 (156-207)||(17586687-17586738)
chr1 (156-207)||(17592529-17592580)
chr1 (156-207)||(23318849-23318900)
chr1 (156-207)||(33511118-33511169)
chr1 (156-207)||(40093343-40093394)
chr1 (160-207)||(41927793-41927840)
chr1 (160-206)||(13995951-13995997)
chr1 (160-206)||(14004065-14004111)
chr1 (156-206)||(15203783-15203833)
chr1 (161-207)||(23499255-23499301)
chr1 (156-197)||(2478471-2478512)
chr1 (156-192)||(1940246-1940282)
chr1 (161-197)||(26664015-26664051)
chr1 (163-207)||(43906395-43906439)
chr1 (156-207)||(6766279-6766330)
chr1 (156-207)||(12683455-12683506)
chr1 (160-202)||(52088462-52088504)
chr1 (162-207)||(2348575-2348620)
chr1 (159-207)||(5678595-5678643)
[»] chr6 (19 HSPs)
chr6 (156-207)||(9460452-9460503)
chr6 (155-207)||(6085938-6085990)
chr6 (155-207)||(34887128-34887180)
chr6 (156-207)||(53747-53798)
chr6 (156-207)||(16306470-16306521)
chr6 (156-207)||(10551041-10551092)
chr6 (156-207)||(18614384-18614435)
chr6 (156-207)||(26703656-26703707)
chr6 (161-207)||(3955122-3955168)
chr6 (153-207)||(33465201-33465255)
chr6 (156-197)||(30691805-30691846)
chr6 (159-207)||(26946374-26946422)
chr6 (158-197)||(2838411-2838450)
chr6 (156-207)||(20727448-20727499)
chr6 (158-193)||(35198971-35199006)
chr6 (156-197)||(3346837-3346878)
chr6 (156-191)||(30692700-30692735)
chr6 (163-207)||(17260377-17260421)
chr6 (159-207)||(23073666-23073714)
[»] chr4 (45 HSPs)
chr4 (156-207)||(2480813-2480864)
chr4 (156-207)||(28031934-28031985)
chr4 (150-207)||(14988607-14988664)
chr4 (150-207)||(38056076-38056133)
chr4 (150-207)||(45423887-45423944)
chr4 (155-207)||(6687850-6687902)
chr4 (155-207)||(38070568-38070620)
chr4 (156-207)||(10687635-10687686)
chr4 (156-207)||(10901275-10901326)
chr4 (156-207)||(50053593-50053644)
chr4 (157-207)||(43289448-43289498)
chr4 (162-207)||(40428118-40428163)
chr4 (163-207)||(6610744-6610788)
chr4 (159-207)||(28361236-28361284)
chr4 (151-207)||(53408937-53408993)
chr4 (156-207)||(15670027-15670078)
chr4 (160-207)||(27531963-27532010)
chr4 (156-207)||(53716706-53716757)
chr4 (156-206)||(27488147-27488197)
chr4 (157-207)||(41852213-41852263)
chr4 (153-207)||(54190374-54190428)
chr4 (156-197)||(44784212-44784253)
chr4 (150-207)||(47632951-47633008)
chr4 (150-207)||(50354461-50354518)
chr4 (156-197)||(52140127-52140168)
chr4 (159-207)||(9595300-9595348)
chr4 (151-207)||(16701628-16701684)
chr4 (155-207)||(19912926-19912978)
chr4 (153-197)||(23702063-23702107)
chr4 (159-207)||(33704682-33704730)
chr4 (156-207)||(1756249-1756300)
chr4 (160-207)||(8590096-8590143)
chr4 (156-207)||(35490260-35490311)
chr4 (161-207)||(16704869-16704915)
chr4 (161-207)||(20877786-20877832)
chr4 (159-197)||(48910610-48910648)
chr4 (156-197)||(15240321-15240362)
chr4 (158-207)||(23775764-23775812)
chr4 (162-207)||(53353713-53353758)
chr4 (161-193)||(23261220-23261252)
chr4 (159-207)||(26088184-26088232)
chr4 (159-207)||(27583128-27583176)
chr4 (156-207)||(30172359-30172410)
chr4 (165-207)||(51780281-51780323)
chr4 (170-207)||(53876411-53876448)
[»] chr8 (32 HSPs)
chr8 (150-207)||(18595393-18595450)
chr8 (156-207)||(4716627-4716678)
chr8 (156-207)||(10830656-10830707)
chr8 (156-207)||(15730449-15730500)
chr8 (156-207)||(44804183-44804234)
chr8 (158-207)||(883439-883488)
chr8 (156-197)||(14423592-14423633)
chr8 (155-207)||(22259926-22259978)
chr8 (159-207)||(39219454-39219502)
chr8 (156-207)||(2041798-2041849)
chr8 (156-207)||(24112477-24112528)
chr8 (156-207)||(26782015-26782066)
chr8 (156-207)||(34678956-34679007)
chr8 (156-207)||(35117502-35117553)
chr8 (151-207)||(6143768-6143824)
chr8 (160-196)||(34841838-34841874)
chr8 (153-197)||(36494918-36494962)
chr8 (160-207)||(4036506-4036553)
chr8 (156-207)||(40116677-40116728)
chr8 (159-206)||(42572266-42572313)
chr8 (159-197)||(38166235-38166273)
chr8 (162-207)||(9807955-9808000)
chr8 (156-197)||(18684895-18684936)
chr8 (156-197)||(18730460-18730501)
chr8 (156-197)||(39222158-39222199)
chr8 (156-197)||(41576261-41576302)
chr8 (156-192)||(8022384-8022420)
chr8 (159-207)||(34998178-34998226)
chr8 (160-207)||(6082907-6082954)
chr8 (156-207)||(33286439-33286490)
chr8 (159-197)||(5015256-5015294)
chr8 (161-207)||(39207315-39207361)
[»] chr2 (25 HSPs)
chr2 (150-207)||(33905278-33905335)
chr2 (156-207)||(1110140-1110191)
chr2 (150-207)||(851753-851810)
chr2 (155-207)||(12517392-12517444)
chr2 (156-207)||(1481269-1481320)
chr2 (156-207)||(3872476-3872527)
chr2 (156-207)||(26322516-26322567)
chr2 (153-207)||(19383343-19383397)
chr2 (160-206)||(19900662-19900708)
chr2 (161-207)||(28323012-28323058)
chr2 (159-197)||(31516566-31516604)
chr2 (148-209)||(39463863-39463924)
chr2 (162-207)||(39636197-39636242)
chr2 (159-207)||(5734242-5734290)
chr2 (161-197)||(16065740-16065776)
chr2 (155-207)||(18806112-18806164)
chr2 (159-207)||(42938639-42938687)
chr2 (156-207)||(12516397-12516448)
chr2 (160-206)||(2178132-2178178)
chr2 (160-206)||(4231658-4231704)
chr2 (156-206)||(30419419-30419469)
chr2 (162-207)||(42445088-42445133)
chr2 (159-197)||(1679410-1679448)
chr2 (156-194)||(6174322-6174360)
chr2 (160-197)||(44946960-44946997)
[»] scaffold0920 (1 HSPs)
scaffold0920 (151-207)||(171-227)
[»] scaffold0167 (1 HSPs)
scaffold0167 (157-207)||(18256-18306)
[»] scaffold1827 (1 HSPs)
scaffold1827 (162-207)||(136-181)
[»] scaffold0172 (1 HSPs)
scaffold0172 (160-207)||(11014-11063)


Alignment Details
Target: chr5 (Bit Score: 134; Significance: 7e-70; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 14 - 155
Target Start/End: Original strand, 1912526 - 1912667
Alignment:
Q  14 ttattctgaaggcttgaaaaatgctaagctcacacaggttagttactttcttaggattatgtcttttaggatatagcctatcaatacaacttataggata 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  1912526 ttattctgaaggcttgaaaaatgctaagctcacacaggttagttactttcttaggattatgtcttttaggatatagcctatcaaaacaacttataggata 1912625  T
Q  114 taagcttttatacataagcacttatgaaaataactcgacttt 155  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  1912626 taagcttttatacataagcacttatgaaaataactggacttt 1912667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 33992104 - 33992056
Alignment:
Q  159 cccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  33992104 cccgtttggataaacagcttatatagatgcttatagcattagagcttat 33992056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 155 - 206
Target Start/End: Original strand, 41817996 - 41818047
Alignment:
Q  155 tggccccgtttggataaacagcttatatagatgcttatagcatcagagctta 206  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  41817996 tggccccgtttggataaacagcttatatagatgcttataacattagagctta 41818047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 156 - 206
Target Start/End: Complemental strand, 16070322 - 16070272
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagctta 206  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  16070322 ggccccgtttggataaacagcttatatagatgcttataacattagagctta 16070272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 19360868 - 19360817
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||||||||||||||||  ||||||||||||||||||||| |||||||||    
T  19360868 ggccccgtttggataaacaatttatatagatgcttatagcattagagcttat 19360817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 26602286 - 26602337
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||||||| |||||||||||||||||||||| || ||||||    
T  26602286 ggccccgtttggataaacaacttatatagatgcttatagcattagggcttat 26602337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 157 - 207
Target Start/End: Original strand, 8373600 - 8373650
Alignment:
Q  157 gccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||||||||||||||| |||||||||||||||||| ||| |||||||||    
T  8373600 gccccgtttggataaacaacttatatagatgcttatatcattagagcttat 8373650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 159 - 197
Target Start/End: Original strand, 33490503 - 33490541
Alignment:
Q  159 cccgtttggataaacagcttatatagatgcttatagcat 197  Q
    |||||||||||||||||||||||||||||||||||||||    
T  33490503 cccgtttggataaacagcttatatagatgcttatagcat 33490541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 206
Target Start/End: Original strand, 35419918 - 35419968
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagctta 206  Q
    ||||||||||||||||||||||||||||||||||||| |||| || |||||    
T  35419918 ggccccgtttggataaacagcttatatagatgcttatggcattagggctta 35419968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 207
Target Start/End: Original strand, 27678487 - 27678544
Alignment:
Q  150 gactttggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||| |||||||||||||||||||| |||||||||||| ||||||||| || ||||||    
T  27678487 gactatggccccgtttggataaacaacttatatagatgtttatagcattagtgcttat 27678544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 24104961 - 24105009
Alignment:
Q  159 cccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||||| ||||||||||||||||||||| || ||||||    
T  24104961 cccgtttggataaacagtttatatagatgcttatagcattagtgcttat 24105009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 151 - 207
Target Start/End: Complemental strand, 27421575 - 27421519
Alignment:
Q  151 actttggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||| |||||||||| |||||||||||||||||||||||||| |||| || ||||||    
T  27421575 acttaggccccgtttagataaacagcttatatagatgcttatggcattagggcttat 27421519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 9007292 - 9007343
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||||||| ||||||||||||||||||| || || ||||||    
T  9007292 ggccccgtttggataaacaacttatatagatgcttatagtattagggcttat 9007343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 19515495 - 19515546
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||||| |||||||| || |||||||||||| |||||||||    
T  19515495 ggccccgtttggataaatagcttatacaggtgcttatagcattagagcttat 19515546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 27025897 - 27025846
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||| |||||||||||||||||||| ||||||||| || ||||||    
T  27025897 ggccccgtttgaataaacagcttatatagatgtttatagcattagggcttat 27025846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 38597158 - 38597209
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||||||||||||| |||||| ||||||||| || ||||||    
T  38597158 ggccccgtttggataaacagcttatttagatgtttatagcattagggcttat 38597209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 207
Target Start/End: Complemental strand, 31884085 - 31884039
Alignment:
Q  161 cgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||||||||||| ||||||||||||| ||| |||||    
T  31884085 cgtttggataaacagcttatataaatgcttatagcattagaacttat 31884039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 207
Target Start/End: Original strand, 34708283 - 34708329
Alignment:
Q  161 cgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||||||||||||||||||||||||||||||| || || ||||||    
T  34708283 cgtttggataaacagcttatatagatgcttatagtattagtgcttat 34708329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 197
Target Start/End: Original strand, 1165052 - 1165093
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcat 197  Q
    |||| |||||||||||||| ||||||||||||||||||||||    
T  1165052 ggcctcgtttggataaacaacttatatagatgcttatagcat 1165093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 207
Target Start/End: Original strand, 35419626 - 35419683
Alignment:
Q  150 gactttggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||| |||| |||||||||||||||| ||||||||||||||||| ||| || ||||||    
T  35419626 gactatggctccgtttggataaacagtttatatagatgcttataacattagggcttat 35419683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 16736638 - 16736686
Alignment:
Q  159 cccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||||||||||||||||||||||| ||||||| |||| || ||||||    
T  16736638 cccgtttggataaacagcttatataggtgcttatggcattagggcttat 16736686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 197
Target Start/End: Complemental strand, 1579739 - 1579704
Alignment:
Q  162 gtttggataaacagcttatatagatgcttatagcat 197  Q
    ||||||||||||||||||||||||||||||| ||||    
T  1579739 gtttggataaacagcttatatagatgcttatggcat 1579704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 197
Target Start/End: Original strand, 1605076 - 1605111
Alignment:
Q  162 gtttggataaacagcttatatagatgcttatagcat 197  Q
    ||||||||||||||||||||||||||||||| ||||    
T  1605076 gtttggataaacagcttatatagatgcttatggcat 1605111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 9e-20; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 150 - 207
Target Start/End: Original strand, 4476310 - 4476367
Alignment:
Q  150 gactttggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  4476310 gactatggccccgtttggataaacagcttatatagatgcttatagcattagagcttat 4476367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 150 - 207
Target Start/End: Complemental strand, 17754501 - 17754444
Alignment:
Q  150 gactttggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  17754501 gactatggccccgtttggataaacagcttatatagatgcttatagcattagagcttat 17754444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 6395982 - 6395934
Alignment:
Q  159 cccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  6395982 cccgtttggataaacagcttatatagatgcttatagcattagagcttat 6395934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 151 - 207
Target Start/End: Complemental strand, 43407851 - 43407795
Alignment:
Q  151 actttggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  43407851 acttaggccccgtttggataaacagcttatattgatgcttatagcattagagcttat 43407795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 5281600 - 5281549
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  5281600 ggccccgtttggataaacagcttatatagatgcttatagcattagggcttat 5281549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 18120693 - 18120744
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  18120693 ggccccgtttggataaacagcttatatagatgcttatagcattagggcttat 18120744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 207
Target Start/End: Original strand, 33358406 - 33358458
Alignment:
Q  155 tggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||||||||||||||||| |||||||||||||||||||||| || ||||||    
T  33358406 tggccccgtttggataaacatcttatatagatgcttatagcattagtgcttat 33358458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 934213 - 934162
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||||||||||||||||| ||||||||||||||||||||| || ||||||    
T  934213 ggccccgtttggataaacagtttatatagatgcttatagcattagggcttat 934162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 12097085 - 12097136
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||||||||||||||||||||||||| |||| || ||||||    
T  12097085 ggccccgtttggataaacagcttatatagatgcttatggcattagggcttat 12097136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 160 - 207
Target Start/End: Original strand, 33845868 - 33845915
Alignment:
Q  160 ccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||||||||||||||||||||||||||||||||||| || ||||||    
T  33845868 ccgtttggataaacagcttatatagatgcttatagcattagtgcttat 33845915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 38867517 - 38867466
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||||||| |||||||||||||||||||||| || ||||||    
T  38867517 ggccccgtttggataaacaacttatatagatgcttatagcattagggcttat 38867466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 202
Target Start/End: Complemental strand, 43157437 - 43157391
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagag 202  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||||    
T  43157437 ggccccgtttggataaacaacttatatagatgcttatagcattagag 43157391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 153 - 194
Target Start/End: Original strand, 12100477 - 12100518
Alignment:
Q  153 tttggccccgtttggataaacagcttatatagatgcttatag 194  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  12100477 tttggctccgtttggataaacagcttatatagatgcttatag 12100518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 197
Target Start/End: Complemental strand, 42205256 - 42205215
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcat 197  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  42205256 ggccccgtttggataaacaacttatatagatgcttatagcat 42205215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 7164892 - 7164841
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||| ||||||||||||||||||||||||||||||| |||| || ||||||    
T  7164892 ggccctgtttggataaacagcttatatagatgcttatggcattagggcttat 7164841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 15648618 - 15648669
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||| |||||||||||||||||||| |||||||||||||  |||||||||    
T  15648618 ggccccatttggataaacagcttatattgatgcttatagcagtagagcttat 15648669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 207
Target Start/End: Complemental strand, 32042246 - 32042199
Alignment:
Q  160 ccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||| |||||||||||||||||| ||| |||||||||    
T  32042246 ccgtttggataaacaacttatatagatgcttatatcattagagcttat 32042199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 37004114 - 37004165
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||| ||||||||||||| |||||| |||||||||||||| |||||||||    
T  37004114 ggccccatttggataaacagtttatattgatgcttatagcattagagcttat 37004165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 156 - 206
Target Start/End: Complemental strand, 8631633 - 8631583
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagctta 206  Q
    ||||||| ||||||||||| |||||||||||| ||||||||| ||||||||    
T  8631633 ggccccgcttggataaacaacttatatagatgtttatagcattagagctta 8631583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 206
Target Start/End: Original strand, 16893830 - 16893876
Alignment:
Q  160 ccgtttggataaacagcttatatagatgcttatagcatcagagctta 206  Q
    ||||||||||||||| |||||||||||||||||| ||| ||||||||    
T  16893830 ccgtttggataaacaacttatatagatgcttataacattagagctta 16893876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 156 - 206
Target Start/End: Original strand, 36890263 - 36890313
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagctta 206  Q
    ||||||||||||||||||| |||||||||||||||||| ||| || |||||    
T  36890263 ggccccgtttggataaacaacttatatagatgcttataccattagggctta 36890313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 156 - 206
Target Start/End: Original strand, 42964103 - 42964153
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagctta 206  Q
    ||||||||||| |||||||||||||||| ||||||||| ||| ||||||||    
T  42964103 ggccccgtttgaataaacagcttatatatatgcttataacattagagctta 42964153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 207
Target Start/End: Original strand, 24791816 - 24791868
Alignment:
Q  155 tggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||| |||||||||||||||||||||||||| |||| | || |||||||||    
T  24791816 tggccctgtttggataaacagcttatatagatgtttatggtattagagcttat 24791868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 3512284 - 3512233
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||| |||||||||||||| |||||||||| ||||||||||| || ||||||    
T  3512284 ggcctcgtttggataaacaacttatatagacgcttatagcattagggcttat 3512233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 9453485 - 9453434
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||| ||||||| ||||||||||| |||||||||| || ||||||    
T  9453485 ggccccgtttgaataaacaacttatatagatacttatagcattagggcttat 9453434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 25749190 - 25749139
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||| ||||||||||| ||||||||||||||||| |||| || ||||||    
T  25749190 ggccccggttggataaacaacttatatagatgcttatggcattagggcttat 25749139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 207
Target Start/End: Complemental strand, 1803811 - 1803765
Alignment:
Q  161 cgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||||||||| | ||||||||||||| || ||||||    
T  1803811 cgtttggataaacagcttatacaaatgcttatagcataagggcttat 1803765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 207
Target Start/End: Original strand, 22648923 - 22648969
Alignment:
Q  161 cgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||||||||||| ||||||||||||||||||| || || ||||||    
T  22648923 cgtttggataaacaacttatatagatgcttatagtattagggcttat 22648969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 207
Target Start/End: Original strand, 30180062 - 30180116
Alignment:
Q  153 tttggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||||||||||||||||||| |||||||| |||||| | |||| |||| ||||    
T  30180062 tttggccccgtttggataaacaacttatatacatgcttgttgcattagagtttat 30180116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 207
Target Start/End: Complemental strand, 42674323 - 42674273
Alignment:
Q  157 gccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||||||| ||||||| |||||||||| || || ||||||    
T  42674323 gccccgtttggataaacagtttatataaatgcttatagtattagggcttat 42674273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 206
Target Start/End: Original strand, 43021059 - 43021109
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagctta 206  Q
    ||||| ||||||||||||| |||||||| ||||||||||||| || |||||    
T  43021059 ggccctgtttggataaacaacttatataaatgcttatagcattagggctta 43021109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 3e-19; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 151 - 207
Target Start/End: Complemental strand, 22175503 - 22175447
Alignment:
Q  151 actttggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  22175503 acttaggccccgtttggataaacagcttatatagatgcttatagcattagagcttat 22175447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 15521540 - 15521489
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  15521540 ggccccgtttggataaacagcttatatagatgcttatagcattagagcttat 15521489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 50529826 - 50529775
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  50529826 ggccccgtttggataaacagcttatatagatgcttatagcattagagcttat 50529775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 151 - 207
Target Start/End: Complemental strand, 20700033 - 20699977
Alignment:
Q  151 actttggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  20700033 acttaggccctgtttggataaacagcttatatagatgcttatagcattagagcttat 20699977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 155 - 207
Target Start/End: Original strand, 29784202 - 29784254
Alignment:
Q  155 tggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  29784202 tggccccgtttggataaacagcttatatagatgtttatagcattagagcttat 29784254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 37697429 - 37697480
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  37697429 ggccccgtttggataaacagcttatatagatgcttatagcattagtgcttat 37697480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 157 - 207
Target Start/End: Original strand, 44608809 - 44608859
Alignment:
Q  157 gccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  44608809 gccccgtttggataaacagcttatatagatgcttatagcattagaacttat 44608859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 150 - 207
Target Start/End: Original strand, 12116964 - 12117021
Alignment:
Q  150 gactttggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||| || ||||||    
T  12116964 gacttaggccctgtttggataaacagcttatatagatgcttatagcattagtgcttat 12117021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 207
Target Start/End: Complemental strand, 13697614 - 13697558
Alignment:
Q  151 actttggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||| || ||||||    
T  13697614 acttaggccccgtttggataaacagcttatatagatgcttataacattagggcttat 13697558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 20841668 - 20841724
Alignment:
Q  150 gactttggccccgtttggataaacagcttatatagatgcttatagcatcagagctta 206  Q
    ||||| ||||||||||||||||||| |||||||||||||||||| ||| ||||||||    
T  20841668 gacttaggccccgtttggataaacaacttatatagatgcttataacattagagctta 20841724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 207
Target Start/End: Complemental strand, 29446410 - 29446358
Alignment:
Q  155 tggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||| ||||||||||||||||||||||||||||||||||||| || ||||||    
T  29446410 tggcctcgtttggataaacagcttatatagatgcttatagcattagggcttat 29446358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 16355418 - 16355367
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||||||| |||||||||||||||||||||| || ||||||    
T  16355418 ggccccgtttggataaacaacttatatagatgcttatagcattagggcttat 16355367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 21581941 - 21581890
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||||||||||||||||||| |||||||||| || ||||||    
T  21581941 ggccccgtttggataaacagcttatatagatacttatagcattagtgcttat 21581890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 160 - 207
Target Start/End: Complemental strand, 35227240 - 35227193
Alignment:
Q  160 ccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||||||||||||||||||||||||||||||||||| || ||||||    
T  35227240 ccgtttggataaacagcttatatagatgcttatagcattagggcttat 35227193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 42307230 - 42307281
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||||||| |||||||||||||||||||||| || ||||||    
T  42307230 ggccccgtttggataaacatcttatatagatgcttatagcattagtgcttat 42307281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 157 - 207
Target Start/End: Original strand, 36787444 - 36787494
Alignment:
Q  157 gccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||||||| ||||||||||||||| |||||||||||||| |||||||||    
T  36787444 gccccgtttgaataaacagcttatattgatgcttatagcattagagcttat 36787494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 207
Target Start/End: Complemental strand, 49129968 - 49129922
Alignment:
Q  161 cgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||    
T  49129968 cgtttggataaacagcttatattgatgcttatagcattagagcttat 49129922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 206
Target Start/End: Original strand, 54533334 - 54533384
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagctta 206  Q
    |||||||||||||||||||||||||||||||| ||||||| | ||||||||    
T  54533334 ggccccgtttggataaacagcttatatagatgtttatagccttagagctta 54533384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 197
Target Start/End: Complemental strand, 32245082 - 32245041
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcat 197  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  32245082 ggccccgtttggataaacagcttatatagatacttatagcat 32245041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 197
Target Start/End: Original strand, 42103546 - 42103587
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcat 197  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  42103546 ggcctcgtttggataaacagcttatatagatgcttatagcat 42103587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 151 - 207
Target Start/End: Original strand, 15517917 - 15517973
Alignment:
Q  151 actttggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||| ||||||||||||||||||||||||||||| |||||||| ||| || ||||||    
T  15517917 acttaggccccgtttggataaacagcttatataggtgcttataccattagggcttat 15517973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 8043574 - 8043523
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||| ||||||||||||| |||||||||||||||||||||| || ||||||    
T  8043574 ggccctgtttggataaacaacttatatagatgcttatagcattagggcttat 8043523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 26000241 - 26000190
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||||||||||||||||  ||||||||||||||||||||| || ||||||    
T  26000241 ggccccgtttggataaacattttatatagatgcttatagcattagtgcttat 26000190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 34701123 - 34701072
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||| |||||||||||||| |||||||||||||||||||||| || ||||||    
T  34701123 ggcctcgtttggataaacaacttatatagatgcttatagcattagggcttat 34701072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 38856797 - 38856746
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||| ||||||||||||||||||||||||||||||| |||| || ||||||    
T  38856797 ggcccagtttggataaacagcttatatagatgcttatggcattagggcttat 38856746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 38934838 - 38934787
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||| ||||||||||||| |||||||||||||||||||||| || ||||||    
T  38934838 ggccctgtttggataaacaacttatatagatgcttatagcattagggcttat 38934787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 207
Target Start/End: Complemental strand, 32360219 - 32360173
Alignment:
Q  161 cgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||||||||||||||| ||||||||| || ||||||    
T  32360219 cgtttggataaacagcttatatagatgtttatagcattagggcttat 32360173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 197
Target Start/End: Original strand, 25493724 - 25493765
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcat 197  Q
    |||| |||||||||||||| ||||||||||||||||||||||    
T  25493724 ggcctcgtttggataaacaacttatatagatgcttatagcat 25493765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 207
Target Start/End: Original strand, 46451650 - 46451695
Alignment:
Q  162 gtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||||||||||||||||||| |||| || ||||||    
T  46451650 gtttggataaacagcttatatagatgcttatggcattagggcttat 46451695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 24835355 - 24835403
Alignment:
Q  159 cccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||||||||||||| ||||||||| ||| || ||||||    
T  24835355 cccgtttggataaacagcttatataaatgcttataacattagggcttat 24835403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 195
Target Start/End: Complemental strand, 44689719 - 44689683
Alignment:
Q  159 cccgtttggataaacagcttatatagatgcttatagc 195  Q
    |||||||||||||||| ||||||||||||||||||||    
T  44689719 cccgtttggataaacaacttatatagatgcttatagc 44689683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 206
Target Start/End: Complemental strand, 52922348 - 52922298
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagctta 206  Q
    ||||| ||||| ||||||| ||||||| |||||||||||||| ||||||||    
T  52922348 ggccctgtttgaataaacaacttatattgatgcttatagcattagagctta 52922298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 197
Target Start/End: Complemental strand, 29785856 - 29785815
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcat 197  Q
    ||||| ||||||||||||| ||||| ||||||||||||||||    
T  29785856 ggccctgtttggataaacaacttatctagatgcttatagcat 29785815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 192
Target Start/End: Original strand, 48924513 - 48924554
Alignment:
Q  151 actttggccccgtttggataaacagcttatatagatgcttat 192  Q
    |||| ||||| |||||||||||||| ||||||||||||||||    
T  48924513 acttaggcccagtttggataaacagattatatagatgcttat 48924554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 207
Target Start/End: Complemental strand, 53029008 - 53028963
Alignment:
Q  162 gtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||| |||||||||||| ||||||||| || ||||||    
T  53029008 gtttggataaacaacttatatagatgtttatagcattagggcttat 53028963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 54869373 - 54869421
Alignment:
Q  159 cccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||||| |||||||| |||||||| ||| || ||||||    
T  54869373 cccgtttggataaacagtttatataggtgcttataccattagggcttat 54869421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 3e-19; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 155 - 207
Target Start/End: Original strand, 8078948 - 8079000
Alignment:
Q  155 tggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  8078948 tggccccgtttggataaacagcttatatagatgcttatagcattagagcttat 8079000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 155 - 207
Target Start/End: Complemental strand, 52697552 - 52697500
Alignment:
Q  155 tggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  52697552 tggccccgtttggataaacagcttatatagatgcttatagcattagagcttat 52697500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 51358672 - 51358723
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  51358672 ggccccgtttggataaacagcttatatagatgcttatagcattagagcttat 51358723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 23323527 - 23323476
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  23323527 ggccccgtttggataaacagcttatatagatgcttatagcattaaagcttat 23323476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 38830018 - 38829967
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  38830018 ggccccgtttggataaacaacttatatagatgcttatagcattagagcttat 38829967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 46410154 - 46410103
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  46410154 ggccccgtttggataaacaacttatatagatgcttatagcattagagcttat 46410103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 158 - 207
Target Start/End: Complemental strand, 32672546 - 32672497
Alignment:
Q  158 ccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  32672546 ccccgtttggataaacaacttatatagatgcttatagcattagagcttat 32672497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 29079392 - 29079344
Alignment:
Q  159 cccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||    
T  29079392 cccgtttggataaacagcttatatagatgcttatagcattagtgcttat 29079344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 1171411 - 1171360
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||||||| |||||||||||||||||||||| | |||||||    
T  1171411 ggccccgtttggataaacaacttatatagatgcttatagcattatagcttat 1171360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 7146556 - 7146505
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||||||||||||||||||||||||||| || || ||||||    
T  7146556 ggccccgtttggataaacagcttatatagatgcttatagtattagggcttat 7146505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 150 - 193
Target Start/End: Complemental strand, 15718583 - 15718540
Alignment:
Q  150 gactttggccccgtttggataaacagcttatatagatgcttata 193  Q
    ||||| ||||||||||||||||||||||||||||||||||||||    
T  15718583 gacttaggccccgtttggataaacagcttatatagatgcttata 15718540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 20097581 - 20097530
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||||||||||||||||||||||||||||||||||| ||| || ||||||    
T  20097581 ggccccgtttggataaacagcttatatagatgcttataacattagtgcttat 20097530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 25898133 - 25898082
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||||||||||||||||||||||||||||| ||||||||| || ||||||    
T  25898133 ggccccgtttggataaacagcttatatagatgtttatagcattagtgcttat 25898082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 29288999 - 29288948
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||||||||||||||||||||||||||||| ||||||||| || ||||||    
T  29288999 ggccccgtttggataaacagcttatatagatgtttatagcattagtgcttat 29288948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 39259698 - 39259749
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||||||||||||||||||||||||||||||||||| ||| || ||||||    
T  39259698 ggccccgtttggataaacagcttatatagatgcttataacattagtgcttat 39259749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 42369641 - 42369692
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||||||| |||||||||||||||||||||| || ||||||    
T  42369641 ggccccgtttggataaacaacttatatagatgcttatagcattagggcttat 42369692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 197
Target Start/End: Complemental strand, 38172659 - 38172618
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcat 197  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  38172659 ggccccgtttggataaacatcttatatagatgcttatagcat 38172618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 193
Target Start/End: Original strand, 52752514 - 52752551
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttata 193  Q
    ||||||||||||||||||||||||||||||||||||||    
T  52752514 ggccccgtttggataaacagcttatatagatgcttata 52752551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 161 - 197
Target Start/End: Complemental strand, 8121754 - 8121718
Alignment:
Q  161 cgtttggataaacagcttatatagatgcttatagcat 197  Q
    |||||||||||||||||||||||||||||||||||||    
T  8121754 cgtttggataaacagcttatatagatgcttatagcat 8121718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 158 - 206
Target Start/End: Complemental strand, 16053041 - 16052993
Alignment:
Q  158 ccccgtttggataaacagcttatatagatgcttatagcatcagagctta 206  Q
    |||||||||||||||||||||||||||||||||||| ||| | ||||||    
T  16053041 ccccgtttggataaacagcttatatagatgcttataacattatagctta 16052993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 197
Target Start/End: Original strand, 26579508 - 26579548
Alignment:
Q  157 gccccgtttggataaacagcttatatagatgcttatagcat 197  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  26579508 gccccgtttggataaacaacttatatagatgcttatagcat 26579548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 46761861 - 46761813
Alignment:
Q  159 cccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||||| ||||||||||| ||||||||| |||||||||    
T  46761861 cccgtttggataaacagtttatatagatgtttatagcattagagcttat 46761813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 969851 - 969890
Alignment:
Q  158 ccccgtttggataaacagcttatatagatgcttatagcat 197  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  969851 ccccgtttggataaacaacttatatagatgcttatagcat 969890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 1168710 - 1168761
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||||||| |||||||||||||||||| ||| || ||||||    
T  1168710 ggccccgtttggataaacaacttatatagatgcttataacattagggcttat 1168761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 17586687 - 17586738
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||| |||||||||||| |||||||||||||||||||||| || ||||||    
T  17586687 ggccccatttggataaacaacttatatagatgcttatagcattagggcttat 17586738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 17592580 - 17592529
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||| ||||||||||||| |||||||||||||||||||||| || ||||||    
T  17592580 ggccctgtttggataaacaacttatatagatgcttatagcattagggcttat 17592529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 23318849 - 23318900
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||||||| ||||||||  ||||||||||||||||||||| |||||||||    
T  23318849 ggccccgttttgataaacaatttatatagatgcttatagcattagagcttat 23318900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 33511169 - 33511118
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||| ||||||||||||||||||||||||||||||| |||| || ||||||    
T  33511169 ggccctgtttggataaacagcttatatagatgcttatggcattagggcttat 33511118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 40093394 - 40093343
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||||||| ||||||||||| ||||||||||  ||||||||    
T  40093394 ggccccgtttggataaacaacttatatagatacttatagcattggagcttat 40093343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 207
Target Start/End: Original strand, 41927793 - 41927840
Alignment:
Q  160 ccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||||||||||||||||||||||| || | |||||||    
T  41927793 ccgtttggataaacagcttatatagatgcttatagtattatagcttat 41927840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 206
Target Start/End: Original strand, 13995951 - 13995997
Alignment:
Q  160 ccgtttggataaacagcttatatagatgcttatagcatcagagctta 206  Q
    |||||||||| ||||||||||||||||||||||| ||| ||||||||    
T  13995951 ccgtttggatcaacagcttatatagatgcttataacattagagctta 13995997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 206
Target Start/End: Original strand, 14004065 - 14004111
Alignment:
Q  160 ccgtttggataaacagcttatatagatgcttatagcatcagagctta 206  Q
    |||||||||| ||||||||||||||||||||||| ||| ||||||||    
T  14004065 ccgtttggatcaacagcttatatagatgcttataacattagagctta 14004111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 156 - 206
Target Start/End: Complemental strand, 15203833 - 15203783
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagctta 206  Q
    |||||||||||||||||||||||||||| ||  ||||||||| ||||||||    
T  15203833 ggccccgtttggataaacagcttatataaatatttatagcattagagctta 15203783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 207
Target Start/End: Complemental strand, 23499301 - 23499255
Alignment:
Q  161 cgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||| ||||||||||||||||| ||| |||||||||    
T  23499301 cgtttggataaacagtttatatagatgcttataacattagagcttat 23499255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 197
Target Start/End: Complemental strand, 2478512 - 2478471
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcat 197  Q
    ||||| ||||||||||||| ||||||||||||||||||||||    
T  2478512 ggccctgtttggataaacaacttatatagatgcttatagcat 2478471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 192
Target Start/End: Original strand, 1940246 - 1940282
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttat 192  Q
    ||||||||||||||||||| |||||||||||||||||    
T  1940246 ggccccgtttggataaacaacttatatagatgcttat 1940282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 197
Target Start/End: Complemental strand, 26664051 - 26664015
Alignment:
Q  161 cgtttggataaacagcttatatagatgcttatagcat 197  Q
    |||||||||||||| ||||||||||||||||||||||    
T  26664051 cgtttggataaacaacttatatagatgcttatagcat 26664015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 207
Target Start/End: Complemental strand, 43906439 - 43906395
Alignment:
Q  163 tttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||||||||| |||||||||||||||||||||| || ||||||    
T  43906439 tttggataaacaacttatatagatgcttatagcattagggcttat 43906395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 6766330 - 6766279
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||| |||||||  ||||||||||||||||||||| || ||||||    
T  6766330 ggccccgtttgaataaacaatttatatagatgcttatagcattagggcttat 6766279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 12683506 - 12683455
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||||||||||||||||| ||||||| ||||||||| ||| || ||||||    
T  12683506 ggccccgtttggataaacagtttatataaatgcttataacattagggcttat 12683455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 202
Target Start/End: Complemental strand, 52088504 - 52088462
Alignment:
Q  160 ccgtttggataaacagcttatatagatgcttatagcatcagag 202  Q
    ||||||||||||||| |||||||||||||||||| ||| ||||    
T  52088504 ccgtttggataaacaacttatatagatgcttataacattagag 52088462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 207
Target Start/End: Complemental strand, 2348620 - 2348575
Alignment:
Q  162 gtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||||||| |||||||| |||||||||||||||| || ||||||    
T  2348620 gtttggataagcagcttatgtagatgcttatagcattagggcttat 2348575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 5678643 - 5678595
Alignment:
Q  159 cccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||||||||||| |||| ||| | ||||||||||||| |||||||||    
T  5678643 cccgtttggataaatagctcatagaaatgcttatagcattagagcttat 5678595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 1e-18; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 9460503 - 9460452
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  9460503 ggccccgtttggataaacagcttatatagatgtttatagcatcagagcttat 9460452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 155 - 207
Target Start/End: Original strand, 6085938 - 6085990
Alignment:
Q  155 tggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  6085938 tggccccgtttggataaacagcttatatagatgcttataacattagagcttat 6085990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 155 - 207
Target Start/End: Complemental strand, 34887180 - 34887128
Alignment:
Q  155 tggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  34887180 tggccccgtttggataaacaacttatatagatgcttatagcattagagcttat 34887128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 53798 - 53747
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  53798 ggccccgtttggataaacagcttatatagatgcttatagcattagtgcttat 53747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 16306470 - 16306521
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  16306470 ggccccgtttggataaacagcttatatagatgcttatagcattagggcttat 16306521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 10551092 - 10551041
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||| ||||||||||||||||||||||||||||||||||||| || ||||||    
T  10551092 ggcctcgtttggataaacagcttatatagatgcttatagcattagggcttat 10551041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 18614435 - 18614384
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||||||| |||||||||||||||||||||| || ||||||    
T  18614435 ggccccgtttggataaacaacttatatagatgcttatagcattagggcttat 18614384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 26703656 - 26703707
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||||||||||||||||| |||||||||||| || ||||||    
T  26703656 ggccccgtttggataaacagcttatataggtgcttatagcattagtgcttat 26703707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 207
Target Start/End: Original strand, 3955122 - 3955168
Alignment:
Q  161 cgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||    
T  3955122 cgtttggataaacagcttatatagatgcttatagcattagtgcttat 3955168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 153 - 207
Target Start/End: Complemental strand, 33465255 - 33465201
Alignment:
Q  153 tttggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||||||||||| ||||||| |||||||||||||||||||||| ||| |||||    
T  33465255 tttggccccgtttgaataaacaacttatatagatgcttatagcattagaacttat 33465201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 197
Target Start/End: Original strand, 30691805 - 30691846
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcat 197  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  30691805 ggccctgtttggataaacagcttatatagatgcttatagcat 30691846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 26946374 - 26946422
Alignment:
Q  159 cccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||||||||||||||||||||| ||| |||||||||| |||||||||    
T  26946374 cccgtttggataaacagcttatattgatacttatagcattagagcttat 26946422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 2838450 - 2838411
Alignment:
Q  158 ccccgtttggataaacagcttatatagatgcttatagcat 197  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  2838450 ccccgtttggataaacagcttatatagatgtttatagcat 2838411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 20727499 - 20727448
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||||||| ||||||||||||||||| |||| || ||||||    
T  20727499 ggccccgtttggataaacaacttatatagatgcttatggcattagggcttat 20727448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 193
Target Start/End: Complemental strand, 35199006 - 35198971
Alignment:
Q  158 ccccgtttggataaacagcttatatagatgcttata 193  Q
    ||||||||||||||||||||||||||||||||||||    
T  35199006 ccccgtttggataaacagcttatatagatgcttata 35198971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 197
Target Start/End: Original strand, 3346837 - 3346878
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcat 197  Q
    |||| |||||||||||||| ||||||||||||||||||||||    
T  3346837 ggccacgtttggataaacaacttatatagatgcttatagcat 3346878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 191
Target Start/End: Complemental strand, 30692735 - 30692700
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgctta 191  Q
    ||||||||||||||||||| ||||||||||||||||    
T  30692735 ggccccgtttggataaacaacttatatagatgctta 30692700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 207
Target Start/End: Original strand, 17260377 - 17260421
Alignment:
Q  163 tttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||| |||||||||||||| |||||||||||| || |||||||||    
T  17260377 tttgtataaacagcttataaagatgcttatagaattagagcttat 17260421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 23073666 - 23073714
Alignment:
Q  159 cccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||| ||||||||| |||||||||||||||||| ||| |||| ||||    
T  23073666 cccgttaggataaacaacttatatagatgcttataacattagagtttat 23073714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 1e-18; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 2480813 - 2480864
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  2480813 ggccccgtttggataaacagcttatatagatgcttatagcattagagcttat 2480864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 28031934 - 28031985
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  28031934 ggccccgtttggataaacagcttatatagatgcttatagcatccgagcttat 28031985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 150 - 207
Target Start/End: Complemental strand, 14988664 - 14988607
Alignment:
Q  150 gactttggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  14988664 gacttaggccccgtttggataaacagcttatatagatgcttatagcattagtgcttat 14988607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 150 - 207
Target Start/End: Complemental strand, 38056133 - 38056076
Alignment:
Q  150 gactttggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||    
T  38056133 gactttggccccgtttggataaacagcttatatagatgcttaaagcattagggcttat 38056076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 150 - 207
Target Start/End: Original strand, 45423887 - 45423944
Alignment:
Q  150 gactttggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  45423887 gacttaggccccgtttggataaacagcttatatagatgcttatagcattagggcttat 45423944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 155 - 207
Target Start/End: Original strand, 6687850 - 6687902
Alignment:
Q  155 tggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  6687850 tggccccgtttggataaacagcttatatagatgcttatagcattagggcttat 6687902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 155 - 207
Target Start/End: Original strand, 38070568 - 38070620
Alignment:
Q  155 tggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  38070568 tggccccgtttggataaacaacttatatagatgcttatagcattagagcttat 38070620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 10687635 - 10687686
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  10687635 ggccccgtttggataaacaacttatatagatgcttatagcattagagcttat 10687686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 10901275 - 10901326
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  10901275 ggccccgtttggataaacaacttatatagatgcttatagcattagagcttat 10901326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 50053593 - 50053644
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  50053593 ggccccgtttggataaacagcttatatagatgcttatagcattagtgcttat 50053644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 157 - 207
Target Start/End: Original strand, 43289448 - 43289498
Alignment:
Q  157 gccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  43289448 gccccgtttggataaacagcttatatagatgcttatggcatcagggcttat 43289498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 162 - 207
Target Start/End: Original strand, 40428118 - 40428163
Alignment:
Q  162 gtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||||||||||||||||||||||||||||||||| |||||||||    
T  40428118 gtttggataaacagcttatatagatgcttatagcattagagcttat 40428163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 207
Target Start/End: Original strand, 6610744 - 6610788
Alignment:
Q  163 tttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||||||||||||||||||||||| |||||||||    
T  6610744 tttggataaacagcttatatagatgcttatagcattagagcttat 6610788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 28361284 - 28361236
Alignment:
Q  159 cccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||    
T  28361284 cccgtttggataaacagcttatatagatgcttataggattagagcttat 28361236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 207
Target Start/End: Complemental strand, 53408993 - 53408937
Alignment:
Q  151 actttggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||| || ||||||    
T  53408993 acttaggccctgtttggataaacagcttatatagatgcttatagcattagggcttat 53408937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 15670078 - 15670027
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||||||| |||||||||||||||||||||| || ||||||    
T  15670078 ggccccgtttggataaacaacttatatagatgcttatagcattagggcttat 15670027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 160 - 207
Target Start/End: Original strand, 27531963 - 27532010
Alignment:
Q  160 ccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||    
T  27531963 ccgtttggataaacaacttatatagatgcttatagcattagagcttat 27532010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 53716706 - 53716757
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||| ||||||||||||||||||||||||||||||||||||| || ||||||    
T  53716706 ggcctcgtttggataaacagcttatatagatgcttatagcattagggcttat 53716757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 206
Target Start/End: Original strand, 27488147 - 27488197
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagctta 206  Q
    |||||||||||||||||||||||||||||||| |||| |||| ||||||||    
T  27488147 ggccccgtttggataaacagcttatatagatgtttatggcattagagctta 27488197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 157 - 207
Target Start/End: Original strand, 41852213 - 41852263
Alignment:
Q  157 gccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||||||||||||| |||||||||||||||||||||||| || ||||||    
T  41852213 gccccgtttggataaaaagcttatatagatgcttatagcattagggcttat 41852263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 153 - 207
Target Start/End: Complemental strand, 54190428 - 54190374
Alignment:
Q  153 tttggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||||||||||||||||||| |||||||||||| ||||||||| || ||||||    
T  54190428 tttggccccgtttggataaacatcttatatagatgtttatagcattagtgcttat 54190374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 197
Target Start/End: Original strand, 44784212 - 44784253
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcat 197  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  44784212 ggccccgtttggataaacaacttatatagatgcttatagcat 44784253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 207
Target Start/End: Complemental strand, 47633008 - 47632951
Alignment:
Q  150 gactttggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||||| | ||||||||||||||||||||||| ||||||||||||| || ||||||    
T  47633008 gactttggtctcgtttggataaacagcttatataaatgcttatagcattagggcttat 47632951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 207
Target Start/End: Complemental strand, 50354518 - 50354461
Alignment:
Q  150 gactttggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||| |||| |||||||||||||| |||||||||||||||||||||| || ||||||    
T  50354518 gacttaggcctcgtttggataaacaacttatatagatgcttatagcattagggcttat 50354461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 197
Target Start/End: Complemental strand, 52140168 - 52140127
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcat 197  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  52140168 ggccccgtttggataaacaacttatatagatgcttatagcat 52140127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 9595300 - 9595348
Alignment:
Q  159 cccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||||||||||| |||||||||||||||||||||||| || ||||||    
T  9595300 cccgtttggataaatagcttatatagatgcttatagcattagggcttat 9595348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 151 - 207
Target Start/End: Complemental strand, 16701684 - 16701628
Alignment:
Q  151 actttggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||| ||| ||||||||||||||| |||||||||||||||||||||| || ||||||    
T  16701684 acttaggctccgtttggataaacaacttatatagatgcttatagcattagggcttat 16701628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 155 - 207
Target Start/End: Original strand, 19912926 - 19912978
Alignment:
Q  155 tggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||| |||||||||||||| |||||||||||||||||||||| || ||||||    
T  19912926 tggcctcgtttggataaacaacttatatagatgcttatagcattagggcttat 19912978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 197
Target Start/End: Original strand, 23702063 - 23702107
Alignment:
Q  153 tttggccccgtttggataaacagcttatatagatgcttatagcat 197  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||    
T  23702063 tttggtcccgtttggataaacagtttatatagatgcttatagcat 23702107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 33704730 - 33704682
Alignment:
Q  159 cccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||||||||||||||||||||||| ||| || ||||||    
T  33704730 cccgtttggataaacagcttatatagatgcttatatcattagggcttat 33704682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 1756249 - 1756300
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||| ||||||||||||||||||||||||||||||| |||| || ||||||    
T  1756249 ggccctgtttggataaacagcttatatagatgcttatggcattagggcttat 1756300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 207
Target Start/End: Original strand, 8590096 - 8590143
Alignment:
Q  160 ccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||||||||||||| ||||||||||||||||| ||| |||||||||    
T  8590096 ccgtttggataaacagtttatatagatgcttatatcattagagcttat 8590143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 35490260 - 35490311
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||||||| ||||||||||||||||| |||| || ||||||    
T  35490260 ggccccgtttggataaacaacttatatagatgcttatggcattagggcttat 35490311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 207
Target Start/End: Complemental strand, 16704915 - 16704869
Alignment:
Q  161 cgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||| |||||||||||||||||| || |||||||||    
T  16704915 cgtttggataaacagtttatatagatgcttatagtattagagcttat 16704869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 207
Target Start/End: Complemental strand, 20877832 - 20877786
Alignment:
Q  161 cgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||||||||||| |||||||||||||||||||||| || ||||||    
T  20877832 cgtttggataaacaacttatatagatgcttatagcattagtgcttat 20877786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 197
Target Start/End: Complemental strand, 48910648 - 48910610
Alignment:
Q  159 cccgtttggataaacagcttatatagatgcttatagcat 197  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  48910648 cccgtttggataaacaacttatatagatgcttatagcat 48910610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 197
Target Start/End: Original strand, 15240321 - 15240362
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcat 197  Q
    ||||||||| ||||||||| ||||||||||||||||||||||    
T  15240321 ggccccgttcggataaacaacttatatagatgcttatagcat 15240362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 207
Target Start/End: Original strand, 23775764 - 23775812
Alignment:
Q  158 ccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||||||||||| || |||||||||||||||||||||| |||||||||    
T  23775764 ccccgtttggataa-caacttatatagatgcttatagcattagagcttat 23775812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 207
Target Start/End: Complemental strand, 53353758 - 53353713
Alignment:
Q  162 gtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||||||||||||||||||| |||| || ||||||    
T  53353758 gtttggataaacagcttatatagatgcttatggcattagggcttat 53353713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 193
Target Start/End: Original strand, 23261220 - 23261252
Alignment:
Q  161 cgtttggataaacagcttatatagatgcttata 193  Q
    |||||||||||||||||||||||||||||||||    
T  23261220 cgtttggataaacagcttatatagatgcttata 23261252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 26088184 - 26088232
Alignment:
Q  159 cccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||||||||||||| ||||||| |||||||||||||| ||| |||||    
T  26088184 cccgtttggataaacaacttatattgatgcttatagcattagaacttat 26088232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 27583128 - 27583176
Alignment:
Q  159 cccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||||||||||| |||||||||| ||||||||||||| || ||||||    
T  27583128 cccgtttggataaaaagcttatataaatgcttatagcattagggcttat 27583176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 30172410 - 30172359
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||| |||||||||||| ||||||||||||||||||| || || ||||||    
T  30172410 ggccccatttggataaacaacttatatagatgcttatagtattagggcttat 30172359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 207
Target Start/End: Original strand, 51780281 - 51780323
Alignment:
Q  165 tggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||||||| |||||||||||| ||||||||| |||||||||    
T  51780281 tggataaacaacttatatagatgtttatagcattagagcttat 51780323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 207
Target Start/End: Complemental strand, 53876448 - 53876411
Alignment:
Q  170 aaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||| |||||||||||||||||||||| |||||||||    
T  53876448 aaacaacttatatagatgcttatagcattagagcttat 53876411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 2e-17; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 150 - 207
Target Start/End: Complemental strand, 18595450 - 18595393
Alignment:
Q  150 gactttggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  18595450 gacttgggccccgtttggataaacagcttatatagatgcttatagcattagtgcttat 18595393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 4716678 - 4716627
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  4716678 ggccccgtttggataaacagcttatatagatgcttatagcatgagggcttat 4716627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 10830656 - 10830707
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  10830656 ggccccgtttggataaacagtttatatagatgcttatagcattagagcttat 10830707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 15730500 - 15730449
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  15730500 ggccccgtttggataaacaacttatatagatgcttatagcattagagcttat 15730449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 44804183 - 44804234
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  44804183 ggccccgtttagataaacagcttatatagatgcttatagcatcagggcttat 44804234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 158 - 207
Target Start/End: Complemental strand, 883488 - 883439
Alignment:
Q  158 ccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  883488 ccccgtttggataaatagcttatatagatgcttatagcattagagcttat 883439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 156 - 197
Target Start/End: Complemental strand, 14423633 - 14423592
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcat 197  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  14423633 ggccccgtttggataaacagcttatatagatgcttatagcat 14423592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 207
Target Start/End: Original strand, 22259926 - 22259978
Alignment:
Q  155 tggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||| |||||||||||||||||||||||||||||||||||||| || ||||||    
T  22259926 tggctccgtttggataaacagcttatatagatgcttatagcattagggcttat 22259978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 39219502 - 39219454
Alignment:
Q  159 cccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||    
T  39219502 cccgtttggataaacagcttatatagatgcttatagcattagggcttat 39219454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 2041798 - 2041849
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||||||| |||||||||||||||||||||| || ||||||    
T  2041798 ggccccgtttggataaacaacttatatagatgcttatagcattagggcttat 2041849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 24112477 - 24112528
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||||||| |||||||||||||||||||||| || ||||||    
T  24112477 ggccccgtttggataaacaacttatatagatgcttatagcattagggcttat 24112528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 26782015 - 26782066
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||||||| |||||||||||||||||||||| || ||||||    
T  26782015 ggccccgtttggataaacaacttatatagatgcttatagcattagggcttat 26782066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 34678956 - 34679007
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||||||||||||||||||||||||| |||| || ||||||    
T  34678956 ggccccgtttggataaacagcttatatagatgcttatggcattagggcttat 34679007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 35117502 - 35117553
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||| ||||||||||||||||||||||||||||||||||||| || ||||||    
T  35117502 ggcctcgtttggataaacagcttatatagatgcttatagcattagggcttat 35117553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 151 - 207
Target Start/End: Original strand, 6143768 - 6143824
Alignment:
Q  151 actttggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||| ||||| ||||||||||||||||||||||||||||||| |||| || ||||||    
T  6143768 acttaggccctgtttggataaacagcttatatagatgcttatggcattagggcttat 6143824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 160 - 196
Target Start/End: Original strand, 34841838 - 34841874
Alignment:
Q  160 ccgtttggataaacagcttatatagatgcttatagca 196  Q
    |||||||||||||||||||||||||||||||||||||    
T  34841838 ccgtttggataaacagcttatatagatgcttatagca 34841874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 197
Target Start/End: Complemental strand, 36494962 - 36494918
Alignment:
Q  153 tttggccccgtttggataaacagcttatatagatgcttatagcat 197  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||    
T  36494962 tttgggcccgtttggataaacagcttatatagatgcgtatagcat 36494918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 207
Target Start/End: Complemental strand, 4036553 - 4036506
Alignment:
Q  160 ccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||||||||||||||||||||| |||| || ||||||    
T  4036553 ccgtttggataaacagcttatatagatgcttatggcattagtgcttat 4036506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 40116677 - 40116728
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||| ||||||||| |||| |||||||||||||||||||||| |||||||||    
T  40116677 ggcctcgtttggattaacaacttatatagatgcttatagcattagagcttat 40116728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 42572313 - 42572266
Alignment:
Q  159 cccgtttggataaacagcttatatagatgcttatagcatcagagctta 206  Q
    ||||||||||||||||| |||||||||| |||||||||| ||||||||    
T  42572313 cccgtttggataaacagtttatatagatacttatagcattagagctta 42572266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 197
Target Start/End: Original strand, 38166235 - 38166273
Alignment:
Q  159 cccgtttggataaacagcttatatagatgcttatagcat 197  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  38166235 cccgtttggataaacagcttatatagatgtttatagcat 38166273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 207
Target Start/End: Complemental strand, 9808000 - 9807955
Alignment:
Q  162 gtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||||||||||||||||||| |||| || ||||||    
T  9808000 gtttggataaacagcttatatagatgcttatggcattagggcttat 9807955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 197
Target Start/End: Complemental strand, 18684936 - 18684895
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcat 197  Q
    ||||||||||||||||| |||||||| |||||||||||||||    
T  18684936 ggccccgtttggataaatagcttatagagatgcttatagcat 18684895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 197
Target Start/End: Complemental strand, 18730501 - 18730460
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcat 197  Q
    ||||||||||||||||| |||||||| |||||||||||||||    
T  18730501 ggccccgtttggataaatagcttatagagatgcttatagcat 18730460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 197
Target Start/End: Complemental strand, 39222199 - 39222158
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcat 197  Q
    ||||| ||||||||||||||||| ||||||||||||||||||    
T  39222199 ggccctgtttggataaacagcttgtatagatgcttatagcat 39222158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 197
Target Start/End: Complemental strand, 41576302 - 41576261
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcat 197  Q
    ||||||||||| |||||||| |||||||||||||||||||||    
T  41576302 ggccccgtttgcataaacagtttatatagatgcttatagcat 41576261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 192
Target Start/End: Complemental strand, 8022420 - 8022384
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttat 192  Q
    ||||| |||||||||||||||||||||||||||||||    
T  8022420 ggccctgtttggataaacagcttatatagatgcttat 8022384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 34998178 - 34998226
Alignment:
Q  159 cccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||||||||||||| |||||||||||||||||| ||| ||| |||||    
T  34998178 cccgtttggataaacaacttatatagatgcttatatcattagaccttat 34998226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 207
Target Start/End: Original strand, 6082907 - 6082954
Alignment:
Q  160 ccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||| |||||||||| ||||||||||||| || ||||||    
T  6082907 ccgtttggataaatagcttatataaatgcttatagcattagggcttat 6082954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 33286439 - 33286490
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||||||| |||||||| |||||||||||| ||||||||| || ||||||    
T  33286439 ggccccgttttgataaacaacttatatagatgtttatagcattagggcttat 33286490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 197
Target Start/End: Complemental strand, 5015294 - 5015256
Alignment:
Q  159 cccgtttggataaacagcttatatagatgcttatagcat 197  Q
    ||||||||||||||||  |||||||||||||||||||||    
T  5015294 cccgtttggataaacaatttatatagatgcttatagcat 5015256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 207
Target Start/End: Complemental strand, 39207361 - 39207315
Alignment:
Q  161 cgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||  ||||||||||||||||||||| || ||||||    
T  39207361 cgtttggataaacaatttatatagatgcttatagcataagggcttat 39207315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 2e-17; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 150 - 207
Target Start/End: Original strand, 33905278 - 33905335
Alignment:
Q  150 gactttggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  33905278 gacttaggccccgtttggataaacagcttatatagatgcttatagcattagggcttat 33905335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 1110191 - 1110140
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  1110191 ggccccgtttggataaacagcttatatagatgcttataacatcagggcttat 1110140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 150 - 207
Target Start/End: Complemental strand, 851810 - 851753
Alignment:
Q  150 gactttggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||| || ||||||    
T  851810 gacttgggccccgtttggataaacaacttatatagatgcttatagcattagggcttat 851753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 207
Target Start/End: Complemental strand, 12517444 - 12517392
Alignment:
Q  155 tggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||||||||||||||| | ||||||||||||| |||||||||    
T  12517444 tggccccgtttggataaacagcttatacaaatgcttatagcattagagcttat 12517392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 1481269 - 1481320
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||||||| ||||||||||| |||||||||| |||||||||    
T  1481269 ggccccgtttggataaacaacttatatagattcttatagcattagagcttat 1481320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 3872476 - 3872527
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||||||| |||||||||||||||||||||| || ||||||    
T  3872476 ggccccgtttggataaacaacttatatagatgcttatagcattagggcttat 3872527  T

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Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 26322516 - 26322567
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||||||||||||||||||||||||||| || || ||||||    
T  26322516 ggccccgtttggataaacagcttatatagatgcttataggattagggcttat 26322567  T

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Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 153 - 207
Target Start/End: Original strand, 19383343 - 19383397
Alignment:
Q  153 tttggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||||| ||||||||||||| ||||||| |||||||||||||| |||||||||    
T  19383343 tttggccctgtttggataaacaacttatatggatgcttatagcattagagcttat 19383397  T

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Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 206
Target Start/End: Original strand, 19900662 - 19900708
Alignment:
Q  160 ccgtttggataaacagcttatatagatgcttatagcatcagagctta 206  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||    
T  19900662 ccgtttggataaacaacttatatagatgcttatagcattagagctta 19900708  T

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Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 207
Target Start/End: Original strand, 28323012 - 28323058
Alignment:
Q  161 cgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||    
T  28323012 cgtttggataaacagcttatatagatgcttatagcattagtgcttat 28323058  T

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Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 159 - 197
Target Start/End: Original strand, 31516566 - 31516604
Alignment:
Q  159 cccgtttggataaacagcttatatagatgcttatagcat 197  Q
    |||||||||||||||||||||||||||||||||||||||    
T  31516566 cccgtttggataaacagcttatatagatgcttatagcat 31516604  T

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Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 209
Target Start/End: Complemental strand, 39463924 - 39463863
Alignment:
Q  148 tcgactttggccccgtttggataaacagcttatatagatgcttatagcatcagagcttattg 209  Q
    ||||||| |||||||||||||||||||| ||||| | |||||| |||||| |||||||||||    
T  39463924 tcgacttaggccccgtttggataaacaggttatacatatgcttgtagcattagagcttattg 39463863  T

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Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 207
Target Start/End: Complemental strand, 39636242 - 39636197
Alignment:
Q  162 gtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||    
T  39636242 gtttagataaacagcttatatagatgcttatagcattagagcttat 39636197  T

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Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 5734290 - 5734242
Alignment:
Q  159 cccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||||||||||||| |||||||||||||||||||||| || ||||||    
T  5734290 cccgtttggataaacaacttatatagatgcttatagcattagggcttat 5734242  T

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Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 161 - 197
Target Start/End: Original strand, 16065740 - 16065776
Alignment:
Q  161 cgtttggataaacagcttatatagatgcttatagcat 197  Q
    |||||||||||||||||||||||||||||||||||||    
T  16065740 cgtttggataaacagcttatatagatgcttatagcat 16065776  T

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Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 155 - 207
Target Start/End: Original strand, 18806112 - 18806164
Alignment:
Q  155 tggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||| ||||||||||||| |||||||||||||||||||||| || ||||||    
T  18806112 tggccctgtttggataaacaacttatatagatgcttatagcattagggcttat 18806164  T

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Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 42938687 - 42938639
Alignment:
Q  159 cccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||||||||||| |||||||||||||||||||||||| ||| |||||    
T  42938687 cccgtttggataaatagcttatatagatgcttatagcattagaacttat 42938639  T

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Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 12516397 - 12516448
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||| ||||||||||||||||||| | ||||||||||||| |||||||||    
T  12516397 ggccccttttggataaacagcttatacaaatgcttatagcattagagcttat 12516448  T

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Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 206
Target Start/End: Original strand, 2178132 - 2178178
Alignment:
Q  160 ccgtttggataaacagcttatatagatgcttatagcatcagagctta 206  Q
    ||||||||||||||| |||||||||||| ||||||||| ||||||||    
T  2178132 ccgtttggataaacaacttatatagatgtttatagcattagagctta 2178178  T

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Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 206
Target Start/End: Original strand, 4231658 - 4231704
Alignment:
Q  160 ccgtttggataaacagcttatatagatgcttatagcatcagagctta 206  Q
    ||||||||||||||| |||||||||||||||||| ||| ||||||||    
T  4231658 ccgtttggataaacaacttatatagatgcttatatcattagagctta 4231704  T

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Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 156 - 206
Target Start/End: Original strand, 30419419 - 30419469
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatagcatcagagctta 206  Q
    |||||||||||||| |||| | |||||||||||||||||||| ||||||||    
T  30419419 ggccccgtttggatgaacaacatatatagatgcttatagcattagagctta 30419469  T

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Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 207
Target Start/End: Original strand, 42445088 - 42445133
Alignment:
Q  162 gtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    ||||||||||||||||||||| |||| ||||||||| |||||||||    
T  42445088 gtttggataaacagcttatattgatgtttatagcattagagcttat 42445133  T

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Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 197
Target Start/End: Complemental strand, 1679448 - 1679410
Alignment:
Q  159 cccgtttggataaacagcttatatagatgcttatagcat 197  Q
    |||||||||||||||| |||||||||||| |||||||||    
T  1679448 cccgtttggataaacatcttatatagatgtttatagcat 1679410  T

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Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 194
Target Start/End: Original strand, 6174322 - 6174360
Alignment:
Q  156 ggccccgtttggataaacagcttatatagatgcttatag 194  Q
    ||||||||||||||||| || ||||||||||||||||||    
T  6174322 ggccccgtttggataaatagtttatatagatgcttatag 6174360  T

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Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 197
Target Start/End: Original strand, 44946960 - 44946997
Alignment:
Q  160 ccgtttggataaacagcttatatagatgcttatagcat 197  Q
    |||||||||||||||| ||||||||||| |||||||||    
T  44946960 ccgtttggataaacagtttatatagatgtttatagcat 44946997  T

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Target: scaffold0920 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0920
Description:

Target: scaffold0920; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 207
Target Start/End: Complemental strand, 227 - 171
Alignment:
Q  151 actttggccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||| ||||||||||||||||||||||||||||||||||||||| || || ||||||    
T  227 acttgggccccgtttggataaacagcttatatagatgcttatagtattagggcttat 171  T

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Target: scaffold0167 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 157 - 207
Target Start/End: Original strand, 18256 - 18306
Alignment:
Q  157 gccccgtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||| ||||||||||||||||||||||||||||||| |||| || ||||||    
T  18256 gccctgtttggataaacagcttatatagatgcttatggcattagggcttat 18306  T

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Target: scaffold1827 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1827
Description:

Target: scaffold1827; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 207
Target Start/End: Complemental strand, 181 - 136
Alignment:
Q  162 gtttggataaacagcttatatagatgcttatagcatcagagcttat 207  Q
    |||||||||||||||||||||||||| ||||||||| || ||||||    
T  181 gtttggataaacagcttatatagatgtttatagcattagggcttat 136  T

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Target: scaffold0172 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 207
Target Start/End: Complemental strand, 11063 - 11014
Alignment:
Q  160 ccgtttggataaacagcttatata--gatgcttatagcatcagagcttat 207  Q
    ||||||||||||||| ||||||||  |||||||||||||| |||||||||    
T  11063 ccgtttggataaacaacttatatatagatgcttatagcattagagcttat 11014  T

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