View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17737_low_30 (Length: 355)
Name: NF17737_low_30
Description: NF17737
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17737_low_30 |
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Alignment Details
Target: chr4 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 7 - 336
Target Start/End: Original strand, 43559034 - 43559368
Alignment:
| Q |
7 |
tcgaagaatatgaaattgaatttgtaagtatatgatgaaatgtatgggtttttgtctttttgatcatatttgagtctttgaccaaagagaaaaagggtga |
106 |
Q |
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| T |
43559034 |
tcgaagaaaatgaaattgaatttgtaagtatatgatgcaatgtatgggtttttgtctttttgatcatatttgagtctttgaccaaagagaaaaagggtga |
43559133 |
T |
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| Q |
107 |
taaatataaaatatgtaatactaat-----aattcagtagttgtagtgttggacaatataaaatattacagccacaaaacaaaattagcttcaatcatta |
201 |
Q |
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| T |
43559134 |
taaatataaaatatgtaatactaatataataattcagtagttgtagtgttggacaatataaaatattacagccacaaaacaaaattagctacaatcatta |
43559233 |
T |
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| Q |
202 |
atcttaaagaatataccgttattcaaactttggcttatgaaaacagatacatcaatcaatggtaaggnnnnnnnnnnnnnnntccgggggagggggtatc |
301 |
Q |
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| T |
43559234 |
atcttaaagaatataccgttattcaaactttggcttatgaaaacagatacatcaatcaatggtaaggaaaaaaaaataaaaatccgggggagggggtatc |
43559333 |
T |
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| Q |
302 |
aaatctcaatctcaatcttaattttatgtactatc |
336 |
Q |
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| T |
43559334 |
aaatctcaatctcaatcttaatcatatgtactatc |
43559368 |
T |
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