View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17739_high_5 (Length: 365)

Name: NF17739_high_5
Description: NF17739
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17739_high_5
NF17739_high_5
[»] chr7 (76 HSPs)
chr7 (8-317)||(48470053-48470361)
chr7 (170-287)||(5947280-5947396)
chr7 (187-316)||(33601342-33601470)
chr7 (168-319)||(36517586-36517734)
chr7 (181-317)||(34035926-34036061)
chr7 (194-317)||(19022524-19022646)
chr7 (174-317)||(20526455-20526597)
chr7 (182-317)||(39967929-39968063)
chr7 (181-306)||(25670512-25670636)
chr7 (170-319)||(45593534-45593684)
chr7 (172-298)||(19302480-19302605)
chr7 (179-317)||(33678789-33678926)
chr7 (167-307)||(39907822-39907959)
chr7 (233-305)||(38499891-38499962)
chr7 (233-308)||(5947202-5947276)
chr7 (207-298)||(20526881-20526971)
chr7 (184-299)||(27863654-27863768)
chr7 (208-306)||(44989630-44989728)
chr7 (170-248)||(4970707-4970785)
chr7 (264-317)||(7244689-7244742)
chr7 (169-306)||(17944257-17944393)
chr7 (187-228)||(18765381-18765422)
chr7 (265-313)||(39280982-39281030)
chr7 (168-220)||(46078204-46078256)
chr7 (174-317)||(11619077-11619219)
chr7 (166-317)||(25596042-25596191)
chr7 (168-307)||(40377765-40377903)
chr7 (241-308)||(46139950-46140017)
chr7 (168-298)||(3927923-3928052)
chr7 (217-307)||(9050654-9050741)
chr7 (261-319)||(11048034-11048092)
chr7 (169-307)||(19719025-19719160)
chr7 (191-316)||(33601963-33602087)
chr7 (261-302)||(47559606-47559647)
chr7 (217-317)||(21568457-21568556)
chr7 (166-213)||(32410652-32410700)
chr7 (189-317)||(34744037-34744164)
chr7 (233-317)||(43648249-43648332)
chr7 (265-301)||(46082061-46082097)
chr7 (168-228)||(48140300-48140359)
chr7 (262-317)||(529384-529439)
chr7 (261-308)||(2825236-2825283)
chr7 (232-307)||(9038131-9038203)
chr7 (272-319)||(12792579-12792626)
chr7 (261-307)||(21247944-21247991)
chr7 (238-305)||(22551389-22551454)
chr7 (264-307)||(27378836-27378879)
chr7 (256-315)||(30181223-30181282)
chr7 (232-319)||(43219622-43219707)
chr7 (266-301)||(44821984-44822019)
chr7 (274-317)||(46280290-46280333)
chr7 (256-307)||(7241336-7241383)
chr7 (164-317)||(28691745-28691896)
chr7 (261-307)||(35007617-35007662)
chr7 (168-226)||(38138405-38138463)
chr7 (173-215)||(46407343-46407385)
chr7 (167-304)||(87026-87161)
chr7 (179-228)||(9210918-9210967)
chr7 (232-293)||(15740533-15740593)
chr7 (163-228)||(22283554-22283619)
chr7 (261-306)||(35267382-35267427)
chr7 (265-306)||(39279982-39280023)
chr7 (168-213)||(39771873-39771918)
chr7 (277-306)||(40252128-40252157)
chr7 (263-308)||(40688993-40689038)
chr7 (236-313)||(43250681-43250756)
chr7 (265-294)||(47134766-47134795)
chr7 (272-317)||(48917362-48917407)
chr7 (264-292)||(6226164-6226192)
chr7 (261-317)||(9423599-9423655)
chr7 (168-228)||(18962496-18962556)
chr7 (265-317)||(24363610-24363662)
chr7 (162-202)||(40371561-40371601)
chr7 (261-313)||(42656508-42656560)
chr7 (172-228)||(44822055-44822111)
chr7 (273-317)||(47130802-47130846)
[»] chr2 (105 HSPs)
chr2 (166-351)||(7928209-7928394)
chr2 (168-302)||(15305698-15305831)
chr2 (168-308)||(4606943-4607082)
chr2 (184-308)||(750688-750811)
chr2 (186-317)||(9174824-9174954)
chr2 (187-317)||(1625909-1626038)
chr2 (172-317)||(26143559-26143701)
chr2 (170-252)||(31744371-31744453)
chr2 (179-299)||(40682316-40682438)
chr2 (179-252)||(44590097-44590170)
chr2 (207-319)||(7035519-7035630)
chr2 (168-299)||(13325597-13325727)
chr2 (194-317)||(18066137-18066259)
chr2 (179-307)||(33319740-33319863)
chr2 (260-317)||(35379020-35379077)
chr2 (168-308)||(41812005-41812143)
chr2 (209-308)||(16451136-16451234)
chr2 (166-228)||(3312174-3312236)
chr2 (171-317)||(45229520-45229665)
chr2 (173-317)||(8017443-8017586)
chr2 (168-317)||(26202037-26202185)
chr2 (171-248)||(27317456-27317533)
chr2 (171-308)||(36114437-36114573)
chr2 (172-252)||(42659128-42659208)
chr2 (261-308)||(29316780-29316827)
chr2 (163-246)||(30331830-30331913)
chr2 (179-306)||(31561666-31561792)
chr2 (190-308)||(41851553-41851670)
chr2 (194-317)||(43279466-43279590)
chr2 (261-319)||(44443328-44443386)
chr2 (217-306)||(5902512-5902599)
chr2 (256-317)||(26626882-26626943)
chr2 (180-313)||(36534781-36534913)
chr2 (256-308)||(3611244-3611296)
chr2 (256-296)||(5365577-5365617)
chr2 (241-317)||(40279276-40279351)
chr2 (241-317)||(40279346-40279421)
chr2 (260-300)||(43511111-43511151)
chr2 (265-308)||(1893290-1893333)
chr2 (180-299)||(2416340-2416458)
chr2 (172-307)||(3978609-3978744)
chr2 (261-308)||(12313178-12313225)
chr2 (256-319)||(16398121-16398184)
chr2 (185-248)||(21828039-21828102)
chr2 (186-308)||(29628673-29628795)
chr2 (170-213)||(40759272-40759315)
chr2 (262-301)||(41407629-41407668)
chr2 (181-308)||(43036575-43036700)
chr2 (266-308)||(12464682-12464724)
chr2 (171-317)||(39659425-39659570)
chr2 (266-308)||(42457966-42458008)
chr2 (263-296)||(1493520-1493553)
chr2 (264-317)||(6718542-6718594)
chr2 (274-319)||(12464491-12464536)
chr2 (174-299)||(15757577-15757701)
chr2 (263-308)||(16867757-16867802)
chr2 (233-302)||(28677638-28677705)
chr2 (260-305)||(35378536-35378581)
chr2 (168-212)||(14319463-14319507)
chr2 (261-317)||(38078415-38078471)
chr2 (241-317)||(40279206-40279281)
chr2 (257-317)||(40279416-40279476)
chr2 (168-228)||(42868394-42868454)
chr2 (272-319)||(680510-680557)
chr2 (173-300)||(2142680-2142806)
chr2 (168-307)||(11863920-11864057)
chr2 (173-224)||(18179050-18179101)
chr2 (256-299)||(21788341-21788384)
chr2 (169-317)||(32592595-32592744)
chr2 (265-308)||(35993389-35993432)
chr2 (261-308)||(43199789-43199836)
chr2 (235-294)||(43717117-43717174)
chr2 (261-308)||(43911004-43911051)
chr2 (172-307)||(44119801-44119935)
chr2 (186-296)||(449877-449986)
chr2 (265-307)||(750161-750203)
chr2 (267-317)||(3078651-3078701)
chr2 (256-298)||(14220822-14220864)
chr2 (261-307)||(19333330-19333376)
chr2 (260-318)||(28039336-28039394)
chr2 (166-212)||(28810363-28810409)
chr2 (269-307)||(32364744-32364782)
chr2 (256-306)||(36043924-36043974)
chr2 (174-212)||(40837356-40837394)
chr2 (170-252)||(42419866-42419948)
chr2 (267-301)||(42621386-42621420)
chr2 (272-322)||(43173226-43173276)
chr2 (166-203)||(2790360-2790397)
chr2 (201-302)||(12194976-12195077)
chr2 (264-317)||(15977994-15978047)
chr2 (189-290)||(19608567-19608667)
chr2 (267-308)||(35329829-35329870)
chr2 (265-317)||(36236451-36236501)
chr2 (212-317)||(41293120-41293224)
chr2 (233-294)||(43570446-43570505)
chr2 (222-295)||(44606078-44606149)
chr2 (274-302)||(1633510-1633538)
chr2 (267-299)||(9877950-9877982)
chr2 (264-308)||(11488295-11488339)
chr2 (171-211)||(27237782-27237822)
chr2 (160-212)||(28933936-28933988)
chr2 (173-213)||(30990357-30990397)
chr2 (265-317)||(34652045-34652097)
chr2 (265-317)||(36415682-36415734)
chr2 (274-302)||(42868484-42868512)
[»] chr8 (68 HSPs)
chr8 (166-317)||(30251365-30251515)
chr8 (168-308)||(43717847-43717989)
chr8 (183-306)||(1058005-1058126)
chr8 (185-308)||(31716157-31716279)
chr8 (181-292)||(32840912-32841022)
chr8 (170-317)||(38648360-38648506)
chr8 (180-306)||(3536870-3536995)
chr8 (169-302)||(35534527-35534659)
chr8 (186-317)||(27028840-27028970)
chr8 (168-307)||(35643901-35644039)
chr8 (233-307)||(9956792-9956865)
chr8 (186-308)||(35749501-35749622)
chr8 (196-317)||(1930044-1930164)
chr8 (166-296)||(10758168-10758297)
chr8 (261-319)||(42215087-42215145)
chr8 (222-307)||(10120775-10120859)
chr8 (166-317)||(43504760-43504910)
chr8 (180-316)||(18133666-18133801)
chr8 (261-317)||(20672759-20672815)
chr8 (164-228)||(38602424-38602488)
chr8 (182-317)||(12976222-12976355)
chr8 (257-307)||(1113077-1113127)
chr8 (187-317)||(26771274-26771403)
chr8 (261-299)||(30389126-30389164)
chr8 (171-297)||(33808332-33808456)
chr8 (181-292)||(11376737-11376847)
chr8 (217-304)||(30918135-30918219)
chr8 (171-307)||(43045641-43045776)
chr8 (166-249)||(12496983-12497066)
chr8 (260-319)||(33714240-33714299)
chr8 (173-228)||(36963272-36963327)
chr8 (260-319)||(42215310-42215369)
chr8 (262-308)||(21653099-21653145)
chr8 (166-228)||(29818855-29818917)
chr8 (261-302)||(4281570-4281611)
chr8 (265-318)||(25869275-25869328)
chr8 (266-306)||(30259134-30259174)
chr8 (261-296)||(2595002-2595037)
chr8 (174-225)||(9130238-9130289)
chr8 (264-319)||(11494153-11494208)
chr8 (195-317)||(28763377-28763498)
chr8 (217-308)||(29168019-29168109)
chr8 (262-308)||(2482881-2482927)
chr8 (179-213)||(4560614-4560648)
chr8 (256-302)||(27049390-27049436)
chr8 (256-294)||(31751557-31751595)
chr8 (272-306)||(36338278-36338312)
chr8 (267-317)||(44236834-44236884)
chr8 (174-228)||(44792753-44792807)
chr8 (273-306)||(3537046-3537079)
chr8 (170-215)||(13958001-13958046)
chr8 (172-225)||(15180639-15180692)
chr8 (261-298)||(26583379-26583416)
chr8 (179-228)||(40859707-40859756)
chr8 (208-288)||(779015-779093)
chr8 (266-302)||(8499312-8499348)
chr8 (272-308)||(10114507-10114543)
chr8 (265-317)||(11569466-11569518)
chr8 (262-306)||(12558996-12559040)
chr8 (264-308)||(18930720-18930764)
chr8 (180-212)||(22505655-22505687)
chr8 (266-294)||(26284805-26284833)
chr8 (265-317)||(28769348-28769400)
chr8 (265-313)||(39866743-39866791)
chr8 (273-317)||(39881769-39881813)
chr8 (170-214)||(41475027-41475071)
chr8 (265-317)||(41620300-41620352)
chr8 (261-301)||(44401586-44401626)
[»] chr3 (101 HSPs)
chr3 (179-317)||(21367676-21367813)
chr3 (159-317)||(24085241-24085399)
chr3 (179-317)||(18405755-18405892)
chr3 (181-291)||(26878235-26878344)
chr3 (181-307)||(46031009-46031134)
chr3 (168-317)||(39980738-39980886)
chr3 (186-308)||(34610737-34610858)
chr3 (179-293)||(31365112-31365225)
chr3 (176-317)||(39602132-39602271)
chr3 (170-317)||(402457-402603)
chr3 (166-309)||(47249398-47249539)
chr3 (166-308)||(38902084-38902224)
chr3 (171-308)||(20170630-20170760)
chr3 (190-306)||(3845498-3845612)
chr3 (189-317)||(30443902-30444029)
chr3 (169-317)||(46886606-46886753)
chr3 (174-317)||(20880485-20880627)
chr3 (261-308)||(33883755-33883802)
chr3 (198-308)||(53789406-53789513)
chr3 (259-317)||(2719477-2719535)
chr3 (232-321)||(45541576-45541663)
chr3 (180-252)||(9832680-9832752)
chr3 (257-309)||(31403375-31403427)
chr3 (171-307)||(42747698-42747834)
chr3 (179-302)||(31365233-31365355)
chr3 (184-307)||(46778120-46778241)
chr3 (181-319)||(45264292-45264429)
chr3 (179-308)||(584064-584192)
chr3 (173-294)||(25447163-25447283)
chr3 (256-317)||(35394498-35394559)
chr3 (261-305)||(36887525-36887569)
chr3 (265-317)||(37273143-37273195)
chr3 (197-313)||(37389196-37389311)
chr3 (220-320)||(54837000-54837098)
chr3 (168-318)||(466201-466350)
chr3 (265-319)||(34924547-34924601)
chr3 (196-319)||(39723178-39723303)
chr3 (166-252)||(43046738-43046823)
chr3 (262-308)||(47513671-47513717)
chr3 (168-317)||(901933-902080)
chr3 (181-270)||(5436128-5436216)
chr3 (172-221)||(16072958-16073007)
chr3 (179-212)||(33880481-33880514)
chr3 (261-306)||(40665449-40665494)
chr3 (164-228)||(47132415-47132477)
chr3 (261-306)||(52440667-52440712)
chr3 (166-202)||(1820043-1820079)
chr3 (183-227)||(5448542-5448586)
chr3 (261-317)||(20669181-20669237)
chr3 (265-317)||(25185994-25186046)
chr3 (261-317)||(26320107-26320163)
chr3 (261-317)||(27787020-27787076)
chr3 (166-206)||(27896089-27896129)
chr3 (263-307)||(28622006-28622050)
chr3 (261-317)||(30573919-30573975)
chr3 (169-248)||(42799880-42799960)
chr3 (168-317)||(49556867-49557021)
chr3 (272-308)||(50600194-50600230)
chr3 (261-320)||(2825153-2825212)
chr3 (171-302)||(13715488-13715618)
chr3 (265-320)||(16790387-16790442)
chr3 (265-308)||(21862184-21862227)
chr3 (274-317)||(33972752-33972795)
chr3 (261-308)||(41057172-41057219)
chr3 (264-307)||(50946294-50946337)
chr3 (166-212)||(5407365-5407411)
chr3 (164-308)||(20257553-20257698)
chr3 (274-308)||(26990509-26990543)
chr3 (181-308)||(34235019-34235147)
chr3 (265-307)||(34414793-34414835)
chr3 (261-307)||(36139897-36139943)
chr3 (256-318)||(36878757-36878819)
chr3 (263-317)||(40608388-40608442)
chr3 (266-308)||(41633378-41633420)
chr3 (275-317)||(44747427-44747469)
chr3 (265-307)||(48991870-48991912)
chr3 (217-307)||(50952352-50952440)
chr3 (261-298)||(2128263-2128300)
chr3 (180-213)||(22667515-22667548)
chr3 (180-213)||(22724154-22724187)
chr3 (179-212)||(27792985-27793018)
chr3 (256-317)||(32582753-32582814)
chr3 (261-294)||(45432944-45432977)
chr3 (274-306)||(849730-849762)
chr3 (265-317)||(1217809-1217861)
chr3 (174-214)||(2923589-2923629)
chr3 (261-301)||(3044264-3044304)
chr3 (235-295)||(5391910-5391968)
chr3 (261-313)||(23808069-23808121)
chr3 (261-317)||(24785214-24785270)
chr3 (261-301)||(25925767-25925807)
chr3 (256-308)||(26878135-26878187)
chr3 (208-304)||(28240340-28240434)
chr3 (265-317)||(32069158-32069210)
chr3 (181-284)||(33046724-33046829)
chr3 (217-285)||(34707459-34707525)
chr3 (261-317)||(36783339-36783395)
chr3 (265-293)||(40321078-40321106)
chr3 (273-317)||(44488892-44488936)
chr3 (169-205)||(51929861-51929897)
chr3 (261-293)||(53736125-53736157)
[»] chr5 (91 HSPs)
chr5 (172-317)||(16937800-16937944)
chr5 (181-316)||(1464946-1465080)
chr5 (169-307)||(10639972-10640109)
chr5 (170-308)||(42100329-42100466)
chr5 (174-317)||(11700172-11700313)
chr5 (180-317)||(7984978-7985114)
chr5 (168-316)||(12857618-12857765)
chr5 (179-317)||(7674657-7674793)
chr5 (168-316)||(12857251-12857398)
chr5 (195-317)||(4014362-4014485)
chr5 (179-298)||(6096575-6096693)
chr5 (167-317)||(43300887-43301036)
chr5 (186-308)||(12425589-12425712)
chr5 (241-317)||(39105473-39105548)
chr5 (179-306)||(9202672-9202798)
chr5 (167-306)||(39594827-39594965)
chr5 (169-304)||(40426787-40426921)
chr5 (259-317)||(7319011-7319069)
chr5 (186-308)||(35445775-35445895)
chr5 (179-320)||(9107096-9107236)
chr5 (168-308)||(34736440-34736579)
chr5 (179-301)||(35446080-35446197)
chr5 (257-304)||(40848767-40848814)
chr5 (256-306)||(34160751-34160801)
chr5 (211-308)||(29925859-29925955)
chr5 (166-215)||(35299875-35299924)
chr5 (174-287)||(41419358-41419470)
chr5 (182-246)||(15015922-15015986)
chr5 (174-317)||(32009701-32009844)
chr5 (170-294)||(41535413-41535536)
chr5 (169-313)||(42500157-42500298)
chr5 (174-213)||(5377116-5377155)
chr5 (257-308)||(7319424-7319475)
chr5 (170-317)||(15246842-15246988)
chr5 (211-302)||(16457935-16458025)
chr5 (181-248)||(32372689-32372756)
chr5 (166-308)||(7705909-7706050)
chr5 (263-317)||(7907890-7907944)
chr5 (164-252)||(1773016-1773101)
chr5 (168-301)||(3932589-3932721)
chr5 (263-316)||(13697766-13697819)
chr5 (168-317)||(25461561-25461708)
chr5 (263-308)||(33533546-33533591)
chr5 (267-308)||(36326029-36326070)
chr5 (256-313)||(42099872-42099929)
chr5 (176-212)||(3255630-3255666)
chr5 (233-305)||(8334592-8334663)
chr5 (261-317)||(11707064-11707120)
chr5 (261-317)||(37611220-37611276)
chr5 (261-317)||(37787950-37788006)
chr5 (265-317)||(41957460-41957512)
chr5 (261-317)||(42582921-42582977)
chr5 (181-248)||(3520654-3520721)
chr5 (265-308)||(8177541-8177584)
chr5 (161-228)||(12433079-12433146)
chr5 (263-306)||(31071259-31071302)
chr5 (174-287)||(41534480-41534589)
chr5 (257-291)||(7808540-7808574)
chr5 (267-305)||(10272442-10272480)
chr5 (261-299)||(14182386-14182424)
chr5 (261-307)||(17258888-17258934)
chr5 (181-239)||(27298186-27298244)
chr5 (266-308)||(29845444-29845486)
chr5 (164-249)||(32941545-32941631)
chr5 (267-317)||(36318783-36318833)
chr5 (266-308)||(38104867-38104909)
chr5 (232-317)||(2568667-2568750)
chr5 (186-298)||(4625756-4625868)
chr5 (164-205)||(9174936-9174977)
chr5 (224-299)||(10280569-10280641)
chr5 (198-319)||(19460330-19460449)
chr5 (261-306)||(28413289-28413334)
chr5 (263-320)||(39477889-39477946)
chr5 (179-252)||(40452294-40452367)
chr5 (173-210)||(42647005-42647042)
chr5 (265-301)||(1899179-1899215)
chr5 (179-215)||(2973467-2973503)
chr5 (272-300)||(5721233-5721261)
chr5 (162-202)||(8651259-8651299)
chr5 (261-301)||(10125723-10125763)
chr5 (269-317)||(12242723-12242771)
chr5 (261-313)||(12521541-12521593)
chr5 (266-298)||(26618201-26618233)
chr5 (261-317)||(32059364-32059420)
chr5 (265-317)||(32194088-32194140)
chr5 (168-228)||(34102226-34102286)
chr5 (261-301)||(35055192-35055231)
chr5 (261-301)||(35071934-35071973)
chr5 (265-317)||(36639531-36639583)
chr5 (241-317)||(37954695-37954770)
chr5 (255-311)||(42646682-42646738)
[»] chr4 (86 HSPs)
chr4 (173-308)||(13126494-13126628)
chr4 (170-317)||(17822780-17822926)
chr4 (166-308)||(24169281-24169422)
chr4 (164-317)||(27043739-27043891)
chr4 (171-317)||(54426052-54426197)
chr4 (179-308)||(52315121-52315249)
chr4 (169-317)||(21731570-21731717)
chr4 (190-307)||(1706641-1706757)
chr4 (169-302)||(25904137-25904269)
chr4 (164-317)||(26774-26925)
chr4 (168-317)||(35571544-35571692)
chr4 (181-286)||(49939877-49939981)
chr4 (208-308)||(49202663-49202762)
chr4 (186-317)||(22666498-22666628)
chr4 (209-319)||(25332781-25332891)
chr4 (174-317)||(39603090-39603231)
chr4 (186-308)||(22662028-22662149)
chr4 (170-308)||(55302267-55302404)
chr4 (173-226)||(8705040-8705093)
chr4 (166-238)||(18815110-18815182)
chr4 (174-298)||(41336788-41336911)
chr4 (168-228)||(44797977-44798037)
chr4 (172-248)||(55437153-55437229)
chr4 (179-317)||(1407965-1408103)
chr4 (173-252)||(49940085-49940164)
chr4 (261-319)||(28300304-28300362)
chr4 (172-317)||(40830947-40831090)
chr4 (264-313)||(25319890-25319939)
chr4 (241-306)||(55414406-55414470)
chr4 (197-313)||(2244064-2244179)
chr4 (217-317)||(4798529-4798627)
chr4 (261-317)||(17884077-17884133)
chr4 (168-288)||(25571298-25571416)
chr4 (164-220)||(42403932-42403988)
chr4 (265-317)||(53673667-53673719)
chr4 (233-299)||(20109612-20109677)
chr4 (181-299)||(22030230-22030347)
chr4 (272-306)||(50004160-50004194)
chr4 (272-317)||(825506-825551)
chr4 (179-228)||(15173227-15173276)
chr4 (256-317)||(49803217-49803278)
chr4 (262-319)||(51630118-51630175)
chr4 (266-307)||(53792590-53792631)
chr4 (233-306)||(55064855-55064927)
chr4 (257-300)||(2703052-2703096)
chr4 (170-210)||(19394864-19394904)
chr4 (186-317)||(29912957-29913086)
chr4 (170-317)||(39691064-39691204)
chr4 (208-308)||(47118919-47119017)
chr4 (265-308)||(5131259-5131302)
chr4 (164-203)||(23319973-23320012)
chr4 (261-292)||(24747353-24747384)
chr4 (274-317)||(28615532-28615575)
chr4 (261-304)||(47145984-47146027)
chr4 (210-313)||(50681044-50681146)
chr4 (261-308)||(53138055-53138102)
chr4 (261-308)||(55084486-55084533)
chr4 (267-313)||(2592320-2592366)
chr4 (261-299)||(8469382-8469420)
chr4 (267-317)||(17975380-17975430)
chr4 (268-306)||(18628555-18628593)
chr4 (179-213)||(29376015-29376049)
chr4 (274-308)||(30377433-30377467)
chr4 (265-299)||(33534178-33534212)
chr4 (258-307)||(3155622-3155671)
chr4 (261-306)||(7694015-7694060)
chr4 (269-306)||(8704981-8705018)
chr4 (267-308)||(14011252-14011293)
chr4 (207-300)||(21523584-21523675)
chr4 (166-203)||(29126174-29126211)
chr4 (272-317)||(29601024-29601069)
chr4 (261-294)||(42461283-42461316)
chr4 (261-294)||(43824315-43824348)
chr4 (176-252)||(52172797-52172874)
chr4 (266-318)||(6364157-6364209)
chr4 (265-313)||(19429722-19429770)
chr4 (271-299)||(21879631-21879659)
chr4 (181-213)||(28615636-28615668)
chr4 (261-317)||(29263379-29263435)
chr4 (233-317)||(30668345-30668427)
chr4 (186-214)||(32724216-32724244)
chr4 (273-317)||(39063664-39063708)
chr4 (261-317)||(40532599-40532655)
chr4 (274-302)||(44138583-44138611)
chr4 (273-317)||(47800632-47800676)
chr4 (261-317)||(52259640-52259696)
[»] chr1 (116 HSPs)
chr1 (173-317)||(3233933-3234076)
chr1 (170-319)||(2295103-2295251)
chr1 (165-300)||(3887542-3887676)
chr1 (256-308)||(38503465-38503517)
chr1 (170-317)||(37631474-37631620)
chr1 (174-320)||(27146174-27146319)
chr1 (168-317)||(37842269-37842416)
chr1 (179-307)||(1432534-1432661)
chr1 (164-283)||(38001639-38001756)
chr1 (184-298)||(29904779-29904892)
chr1 (173-318)||(7941614-7941758)
chr1 (256-317)||(27820337-27820398)
chr1 (168-306)||(37473423-37473564)
chr1 (179-303)||(2777915-2778037)
chr1 (256-316)||(15784339-15784399)
chr1 (186-306)||(36514607-36514726)
chr1 (170-317)||(14576569-14576714)
chr1 (263-317)||(7137005-7137059)
chr1 (208-306)||(27145689-27145785)
chr1 (263-317)||(34290245-34290299)
chr1 (179-319)||(5720932-5721071)
chr1 (188-309)||(7069433-7069553)
chr1 (165-317)||(10199318-10199469)
chr1 (261-318)||(15361048-15361105)
chr1 (179-307)||(41195120-41195244)
chr1 (180-317)||(49938756-49938892)
chr1 (171-302)||(473188-473317)
chr1 (261-305)||(5886999-5887043)
chr1 (181-317)||(6102163-6102297)
chr1 (257-317)||(45975699-45975759)
chr1 (257-317)||(51695496-51695556)
chr1 (166-225)||(2295291-2295350)
chr1 (266-317)||(12564509-12564560)
chr1 (168-291)||(27976639-27976758)
chr1 (180-306)||(38116002-38116128)
chr1 (261-308)||(46252687-46252734)
chr1 (174-307)||(6292512-6292643)
chr1 (179-317)||(13810007-13810144)
chr1 (261-319)||(14629971-14630029)
chr1 (170-314)||(43230687-43230828)
chr1 (179-319)||(5741613-5741752)
chr1 (168-217)||(41505782-41505831)
chr1 (171-296)||(47498756-47498879)
chr1 (169-225)||(14385707-14385763)
chr1 (265-317)||(26779934-26779986)
chr1 (265-317)||(27140487-27140539)
chr1 (265-313)||(28689461-28689509)
chr1 (168-252)||(38247400-38247484)
chr1 (181-292)||(11941296-11941406)
chr1 (261-304)||(31517745-31517788)
chr1 (169-299)||(33186332-33186462)
chr1 (195-306)||(38018304-38018414)
chr1 (167-246)||(39976122-39976201)
chr1 (261-307)||(8016276-8016322)
chr1 (186-228)||(33204325-33204367)
chr1 (174-252)||(37617384-37617462)
chr1 (262-308)||(47885039-47885085)
chr1 (174-248)||(50644174-50644248)
chr1 (258-307)||(2294930-2294979)
chr1 (186-298)||(6556999-6557111)
chr1 (208-317)||(14443458-14443565)
chr1 (166-223)||(15477655-15477712)
chr1 (166-223)||(34952304-34952361)
chr1 (272-308)||(1232921-1232957)
chr1 (265-317)||(3224432-3224484)
chr1 (269-317)||(4700079-4700127)
chr1 (256-308)||(7069319-7069371)
chr1 (272-308)||(7472329-7472365)
chr1 (233-317)||(10744310-10744392)
chr1 (272-308)||(10809363-10809399)
chr1 (261-317)||(25479590-25479646)
chr1 (257-313)||(27820197-27820253)
chr1 (265-301)||(35179164-35179200)
chr1 (259-299)||(38882915-38882955)
chr1 (274-314)||(51190860-51190900)
chr1 (278-317)||(9572093-9572132)
chr1 (256-307)||(15687346-15687397)
chr1 (261-308)||(35058437-35058484)
chr1 (261-308)||(37593689-37593736)
chr1 (216-299)||(50725233-50725315)
chr1 (181-298)||(489218-489334)
chr1 (265-319)||(4768838-4768892)
chr1 (181-211)||(5047260-5047290)
chr1 (186-252)||(10233579-10233645)
chr1 (272-302)||(10799486-10799516)
chr1 (166-252)||(34795357-34795443)
chr1 (262-308)||(35590898-35590944)
chr1 (263-317)||(42174864-42174918)
chr1 (166-212)||(43420371-43420417)
chr1 (264-294)||(47877141-47877171)
chr1 (262-307)||(7218080-7218125)
chr1 (257-306)||(17577769-17577818)
chr1 (279-320)||(17778712-17778753)
chr1 (261-317)||(19389910-19389967)
chr1 (256-317)||(24915051-24915112)
chr1 (180-213)||(28837278-28837311)
chr1 (260-317)||(29270285-29270342)
chr1 (261-298)||(30815658-30815695)
chr1 (190-295)||(37517101-37517205)
chr1 (269-306)||(38867844-38867881)
chr1 (233-302)||(41184628-41184696)
chr1 (278-319)||(44422706-44422747)
chr1 (233-317)||(1509760-1509843)
chr1 (261-317)||(4576814-4576870)
chr1 (260-308)||(6775005-6775053)
chr1 (163-252)||(9572013-9572098)
chr1 (265-317)||(16322858-16322910)
chr1 (181-317)||(17603310-17603445)
chr1 (167-203)||(21002277-21002313)
chr1 (261-317)||(28077074-28077130)
chr1 (261-297)||(31118072-31118108)
chr1 (180-212)||(35017695-35017727)
chr1 (168-228)||(36872825-36872885)
chr1 (267-299)||(37818466-37818498)
chr1 (262-294)||(48748321-48748353)
chr1 (241-317)||(51929525-51929600)
[»] chr6 (55 HSPs)
chr6 (163-293)||(848022-848150)
chr6 (179-305)||(13907606-13907729)
chr6 (172-302)||(34910326-34910455)
chr6 (181-305)||(2455280-2455403)
chr6 (181-302)||(2455015-2455132)
chr6 (232-317)||(31624099-31624182)
chr6 (195-307)||(9912131-9912242)
chr6 (195-308)||(31813179-31813291)
chr6 (167-228)||(35069524-35069585)
chr6 (186-317)||(33089515-33089645)
chr6 (272-317)||(835265-835310)
chr6 (257-302)||(9109252-9109297)
chr6 (217-305)||(2735090-2735177)
chr6 (168-317)||(6538521-6538671)
chr6 (241-317)||(34430447-34430522)
chr6 (169-314)||(35070568-35070708)
chr6 (261-308)||(4420661-4420708)
chr6 (171-317)||(103440-103584)
chr6 (274-308)||(837234-837268)
chr6 (174-248)||(10645304-10645378)
chr6 (157-305)||(33832179-33832322)
chr6 (256-298)||(34882421-34882463)
chr6 (265-309)||(835034-835077)
chr6 (261-317)||(6647396-6647452)
chr6 (205-317)||(20368131-20368241)
chr6 (162-302)||(24982729-24982868)
chr6 (272-308)||(31624957-31624993)
chr6 (232-319)||(696609-696694)
chr6 (267-306)||(738550-738589)
chr6 (167-214)||(10452333-10452380)
chr6 (261-308)||(17241257-17241304)
chr6 (168-223)||(21405067-21405122)
chr6 (263-294)||(31420977-31421008)
chr6 (274-308)||(264381-264415)
chr6 (265-307)||(3528822-3528864)
chr6 (174-228)||(4163250-4163304)
chr6 (174-228)||(4224871-4224925)
chr6 (266-308)||(7785754-7785796)
chr6 (163-213)||(25103206-25103256)
chr6 (273-307)||(26694897-26694931)
chr6 (170-252)||(30926592-30926674)
chr6 (271-308)||(836556-836593)
chr6 (232-293)||(1575783-1575843)
chr6 (261-294)||(6536979-6537012)
chr6 (265-294)||(9027610-9027639)
chr6 (256-317)||(9093556-9093617)
chr6 (241-313)||(12628355-12628424)
chr6 (173-317)||(31624267-31624412)
chr6 (189-225)||(658463-658499)
chr6 (267-307)||(9913346-9913386)
chr6 (265-317)||(10031741-10031793)
chr6 (263-299)||(21024238-21024274)
chr6 (265-301)||(27909647-27909683)
chr6 (173-213)||(33068520-33068560)
chr6 (256-308)||(34508661-34508712)
[»] scaffold0221 (1 HSPs)
scaffold0221 (170-308)||(22249-22386)
[»] scaffold0057 (2 HSPs)
scaffold0057 (187-296)||(24651-24759)
scaffold0057 (163-203)||(24953-24993)
[»] scaffold0147 (1 HSPs)
scaffold0147 (271-317)||(23640-23686)
[»] scaffold0020 (1 HSPs)
scaffold0020 (169-203)||(159887-159921)
[»] scaffold0018 (1 HSPs)
scaffold0018 (273-305)||(178342-178374)


Alignment Details
Target: chr7 (Bit Score: 218; Significance: 1e-120; HSPs: 76)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 8 - 317
Target Start/End: Complemental strand, 48470361 - 48470053
Alignment:
Q  8 catcatcaggaacatcttcatcagaatcatcatcactttcattcaatgccctcttccccatcctagaaaaaccaaacaccaacacagcacaaatataaat 107  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48470361 catcatcagtaacatctccatcagaatcatcatcactttcattcaatgccctcttccccatcctagaaaaaccaaacaccaacacagcacaaatataaat 48470262  T
Q  108 accaatccataaaatccaacaattgacccaaacaaataaacacattcaaatttcatattaagggcctgttaggattggcttatttgagcttatctattga 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  48470261 accaatccataaaatccaacaattgacccaaacaaataaacacattcaaatttcatattaagggcctgttaggattggcttatttgagcttatctataga 48470162  T
Q  208 cataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcataagttctccaagatag 307  Q
    |||||||| | ||||| |||| |  ||||||| |||||||||||| ||| |||| |||||||| | |||| ||||||| |||||||||| | ||| ||||    
T  48470161 cataagttttatgagattgtttgggagaacttatgaaaacagcttatgg-catttttcataagcttttttgagcttatgttcataagttattcaaaatag 48470063  T
Q  308 cctataaaaa 317  Q
    | ||| ||||    
T  48470062 cttatgaaaa 48470053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 170 - 287
Target Start/End: Complemental strand, 5947396 - 5947280
Alignment:
Q  170 ggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataa 269  Q
    |||||||| ||||||||||||||||||||||||||||  ||||||| | |||||||||| | |||||||||||||| |||||| | |||||| ||||||     
T  5947396 ggcctgtttggattggcttatttgagcttatctattggtataagttttatgagactgtttggaagaacttttgaaaccagcttat-gacatttttcatat 5947298  T
Q  270 gttgttttcagcttattt 287  Q
    | | ||| ||||||||||    
T  5947297 gctttttacagcttattt 5947280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 187 - 316
Target Start/End: Original strand, 33601342 - 33601470
Alignment:
Q  187 ttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttatt 286  Q
    |||||||||||||||||||| |||||||| ||||||||| ||    ||||||| |||||||||||| | |||| | |||||||| | |||||||||||      
T  33601342 ttatttgagcttatctattggcataagttttgtgagactcttttcgagaacttatgaaaacagcttat-gacacttttcataagcttttttcagcttaaa 33601440  T
Q  287 ttcataagttctccaagatagcctataaaa 316  Q
    ||||||||||||| |||||||| |||||||    
T  33601441 ttcataagttctctaagatagcttataaaa 33601470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 168 - 319
Target Start/End: Complemental strand, 36517734 - 36517586
Alignment:
Q  168 agggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcat 267  Q
    |||||||||| |||||   ||||||||||||| ||| || |||||||| | | |||||||| |  ||||||| | ||||||||||   ||||||||||||    
T  36517734 agggcctgtttggattcatttatttgagcttagctactggcataagttttctaagactgtttgggagaacttattaaaacagctt---gacattgttcat 36517638  T
Q  268 aagttgttttcagcttattttcataagttctccaagatagcctataaaaata 319  Q
    ||| | ||||||| |||||||||||| |||||||||||||| ||| ||||||    
T  36517637 aagctattttcagtttattttcataatttctccaagatagcttatgaaaata 36517586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 181 - 317
Target Start/End: Complemental strand, 34036061 - 34035926
Alignment:
Q  181 attggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcag 280  Q
    |||| |||||||||||||||||| ||||||| ||  |||||||||  | | |||||||| |||||| | ||| || |||||||||||||||||||||||     
T  34036061 attgacttatttgagcttatctactgacatatgtattgtgagactacttggaagaacttatgaaaataacttatg-acattgttcataagttgttttcaa 34035963  T
Q  281 cttattttcataagttctccaagatagcctataaaaa 317  Q
    |||||||||  |||||||| |||||||| ||| ||||    
T  34035962 cttattttcgcaagttctctaagatagcttatgaaaa 34035926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 194 - 317
Target Start/End: Original strand, 19022524 - 19022646
Alignment:
Q  194 agcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcataa 293  Q
    |||||||||| |||||| |||| ||||||| |||| |  |||| || |||||||| ||| || ||| | |||||||||||| |||| |||||||||||||    
T  19022524 agcttatctactgacatgagttttgtgagattgtttgggagaatttatgaaaacaacttatg-acaattttcataagttgtcttcaacttattttcataa 19022622  T
Q  294 gttctccaagatagcctataaaaa 317  Q
    ||||||||| ||||| ||||||||    
T  19022623 gttctccaatatagcttataaaaa 19022646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 174 - 317
Target Start/End: Complemental strand, 20526597 - 20526455
Alignment:
Q  174 tgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttg 273  Q
    |||| |||||| |||||||||| ||||||||||  | || || |||||||||||| || ||||||| ||||||||| || |  ||||| ||| |||| ||    
T  20526597 tgtttggattgacttatttgagtttatctattggtagaaattttgtgagactgtttgagagaacttatgaaaacagtttat-cacatttttcgtaagctg 20526499  T
Q  274 ttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||| ||||||||||||| |||||||||| ||||| ||| ||||    
T  20526498 tttttagcttattttcattagttctccaaaatagcttatgaaaa 20526455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 182 - 317
Target Start/End: Complemental strand, 39968063 - 39967929
Alignment:
Q  182 ttggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagc 281  Q
    |||||||||| || |||||||||||| || |||| |||||  ||| | |  ||||||| |||||||||||| ||| ||||||||||||| |||||||| |    
T  39968063 ttggcttattagaacttatctattgatatgagttttgtgattctggttgcgagaacttatgaaaacagcttatgg-cattgttcataagctgttttcaac 39967965  T
Q  282 ttattttcataagttctccaagatagcctataaaaa 317  Q
    |||||||||| |||||||  ||||||| ||| ||||    
T  39967964 ttattttcattagttctctcagatagcttatgaaaa 39967929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 181 - 306
Target Start/End: Original strand, 25670512 - 25670636
Alignment:
Q  181 attggcttatttgagcttatctattgacataagttgt-gtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttca 279  Q
    |||| |||| ||||||||||||||||||||||| | | ||||||||||| || | ||||| |||||||| ||| || |||| ||| |||| |||||||||    
T  25670512 attgacttacttgagcttatctattgacataagctcttgtgagactgtttgagaaaacttatgaaaacaacttatg-acat-gttaataaattgttttca 25670609  T
Q  280 gcttattttcataagttctccaagata 306  Q
    ||||||||||| ||| |||||||||||    
T  25670610 gcttattttcacaagctctccaagata 25670636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 170 - 319
Target Start/End: Complemental strand, 45593684 - 45593534
Alignment:
Q  170 ggcctgttaggattggcttatttgagcttatct-attgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcata 268  Q
    |||||||| ||||||||||||||||| |||| | | ||||||||| | |||||||||||| |  ||||||| | |||||| ||  || ||||| ||||||    
T  45593684 ggcctgtttggattggcttatttgagtttatattactgacataagctttgtgagactgtttgggagaacttataaaaacatctgatg-acatttttcata 45593586  T
Q  269 agttgttttc-agcttattttcataagttctccaagatagcctataaaaata 319  Q
    || | ||||| || |||||||| |||||||||||||||||| || |||||||    
T  45593585 agcttttttccagtttattttcgtaagttctccaagatagcttagaaaaata 45593534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 172 - 298
Target Start/End: Original strand, 19302480 - 19302605
Alignment:
Q  172 cctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagt 271  Q
    |||||| | |||| |||||||||||||||||| ||||||||||| ||||||| | || |  |||| || |||||||||||| | |||| | |||||||      
T  19302480 cctgtttgaattgacttatttgagcttatctactgacataagttttgtgagaatatttgggagaatttatgaaaacagcttat-gacaattttcataaac 19302578  T
Q  272 tgttttcagcttattttcataagttct 298  Q
    | |||||| ||||||||||||||||||    
T  19302579 ttttttcaacttattttcataagttct 19302605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 317
Target Start/End: Complemental strand, 33678926 - 33678789
Alignment:
Q  179 ggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttc 278  Q
    |||||||||||||| | |||||||| |  |||||||| ||||||||  || |  ||||||| |||||||| ||| |  ||||||||||| || |||||||    
T  33678926 ggattggcttatttaaacttatctacttgcataagttttgtgagacaatttgggagaacttatgaaaacaacttata-acattgttcatgagatgttttc 33678828  T
Q  279 agcttattttcataagttctccaagatagcctataaaaa 317  Q
    | |||||||||| ||||| ||||||||||| ||| ||||    
T  33678827 aacttattttcacaagttttccaagatagcttatgaaaa 33678789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 167 - 307
Target Start/End: Complemental strand, 39907959 - 39907822
Alignment:
Q  167 aagggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttca 266  Q
    ||||||||||| ||||||| | |||||||||||| ||  |  ||||||| |||||||||||| || ||||||| | |||  ||||| || |   ||||||    
T  39907959 aagggcctgtttggattggttcatttgagcttatatacagggataagttttgtgagactgtttgagagaacttgtaaaatgagcttatgca---tgttca 39907863  T
Q  267 taagttgttttcagcttattttcataagttctccaagatag 307  Q
    | || |||||||||||||||||||| ||||||| |||||||    
T  39907862 ttagctgttttcagcttattttcattagttctctaagatag 39907822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 233 - 305
Target Start/End: Original strand, 38499891 - 38499962
Alignment:
Q  233 agaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcataagttctccaagat 305  Q
    ||||||||| |||||||||| || ||||| |||||||| | ||| ||||||||||||||||||||||||||||    
T  38499891 agaacttttcaaaacagcttatg-acatttttcataagctttttccagcttattttcataagttctccaagat 38499962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 233 - 308
Target Start/End: Complemental strand, 5947276 - 5947202
Alignment:
Q  233 agaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcataagttctccaagatagc 308  Q
    ||||||||||||| |||||| ||| |||| |||||||| | |||||||||||||||||||| |||||| |||||||    
T  5947276 agaacttttgaaaccagcttatgg-catttttcataagctcttttcagcttattttcataacttctcctagatagc 5947202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 298
Target Start/End: Original strand, 20526881 - 20526971
Alignment:
Q  207 acataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcataagttct 298  Q
    |||||| || |||||||||||| || ||||||  |||||||||||| || | |||||| ||||| | |||||||||||||||||||||||||    
T  20526881 acataaattttgtgagactgtttgagagaactgatgaaaacagcttatg-agattgtttataagatcttttcagcttattttcataagttct 20526971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 299
Target Start/End: Original strand, 27863654 - 27863768
Alignment:
Q  184 ggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagctt 283  Q
    |||||||||||||||||| | || |||||||| ||||||||| || || ||||||| ||||||||||||  | | ||| |||| ||  | ||||||||||    
T  27863654 ggcttatttgagcttatccactggcataagttttgtgagactatttgagagaacttatgaaaacagcttgagaaaatt-ttcaaaaacttttttcagctt 27863752  T
Q  284 attttcataagttctc 299  Q
    || |||||||||||||    
T  27863753 atgttcataagttctc 27863768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 208 - 306
Target Start/End: Original strand, 44989630 - 44989728
Alignment:
Q  208 cataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgtttt-cagcttattttcataagttctccaagata 306  Q
    |||||||| |||||||||||| |  | ||||| |||||||| |||||| |||||||||| ||| |||||| |||||||||||||||| |||| |||||||    
T  44989630 cataagttttgtgagactgtttgggaaaacttatgaaaacaacttctg-acattgttcacaagctgttttgcagcttattttcataatttctacaagata 44989728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 170 - 248
Target Start/End: Original strand, 4970707 - 4970785
Alignment:
Q  170 ggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaaca 248  Q
    |||||||| |||||| |||||||||||||||||  ||||||||||  |||||||||||| |  ||||||| ||||||||    
T  4970707 ggcctgtttggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgggagaacttatgaaaaca 4970785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 317
Target Start/End: Complemental strand, 7244742 - 7244689
Alignment:
Q  264 tcataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||| ||| ||||    
T  7244742 tcataagttgttttcagcttattttcataagctctccaatatagcttatgaaaa 7244689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 306
Target Start/End: Original strand, 17944257 - 17944393
Alignment:
Q  169 gggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcata 268  Q
    ||||||||| ||| || ||||||| |||||||||| || |||||| | ||||||||||||  | | ||||| | |||||||||| | |||| | ||||||    
T  17944257 gggcctgtttggagtgacttatttaagcttatctactggcataagctttgtgagactgtttcagacaacttataaaaacagcttat-gacacttttcata 17944355  T
Q  269 agttgttttcagcttattttcataagttctccaagata 306  Q
     | | ||||||||||| |||||||| || |||||||||    
T  17944356 tgcttttttcagcttaatttcataaattatccaagata 17944393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 18765422 - 18765381
Alignment:
Q  187 ttatttgagcttatctattgacataagttgtgtgagactgtt 228  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  18765422 ttatttgagcttatctattgacataagttttgtgagactgtt 18765381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 265 - 313
Target Start/End: Complemental strand, 39281030 - 39280982
Alignment:
Q  265 cataagttgttttcagcttattttcataagttctccaagatagcctata 313  Q
    ||||||||||||||||||||||| |||| ||||||||||||||| ||||    
T  39281030 cataagttgttttcagcttatttccatatgttctccaagatagcttata 39280982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 168 - 220
Target Start/End: Complemental strand, 46078256 - 46078204
Alignment:
Q  168 agggcctgttaggattggcttatttgagcttatctattgacataagttgtgtg 220  Q
    |||||||| | |||||||||||||| |||||||||||||||||||||| ||||    
T  46078256 agggcctggttggattggcttattttagcttatctattgacataagttttgtg 46078204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 174 - 317
Target Start/End: Original strand, 11619077 - 11619219
Alignment:
Q  174 tgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttg 273  Q
    |||| ||||||||||||||||||||||||| ||||||||| |   ||| || | | |  |||| || |||||||| ||| | |||| | |||||||| |     
T  11619077 tgtttggattggcttatttgagcttatctactgacataagcttcatgaaacagattgggagaatttatgaaaacaacttat-gacaattttcataagctt 11619175  T
Q  274 ttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||||| |||| |||||||||||||||||  |||| ||||||||    
T  11619176 ttttcaacttaatttcataagttctccaacgtagcttataaaaa 11619219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 317
Target Start/End: Complemental strand, 25596191 - 25596042
Alignment:
Q  166 taagggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttc 265  Q
    |||||||||||| ||| || ||||||||||||||||||    ||||||   ||||||| ||||||  | ||| | | |||||||||| || |||  |||     
T  25596191 taagggcctgtttggactgacttatttgagcttatctaccagcataagcattgtgagattgttagggaaaacctataaaaacagcttatg-acaa-gtta 25596094  T
Q  266 ataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
     ||||||||||||| |||||||||||||| ||||||||||||| ||| ||||    
T  25596093 ctaagttgttttcaacttattttcataagctctccaagatagcttatgaaaa 25596042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 168 - 307
Target Start/End: Original strand, 40377765 - 40377903
Alignment:
Q  168 agggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcat 267  Q
    ||||||| || ||||||||||| ||||||||||||| |||  ||||||  |||||||||||  | | |  ||||||||||||||| | |||  | || ||    
T  40377765 agggcctatttggattggcttagttgagcttatctactgaattaagtttagtgagactgttgaagaaattttttgaaaacagctt-ttgactattttaat 40377863  T
Q  268 aagttgttttcagcttattttcataagttctccaagatag 307  Q
    ||| | |||| || ||||||||||||||||||||| ||||    
T  40377864 aagcttttttgagtttattttcataagttctccaatatag 40377903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 308
Target Start/End: Complemental strand, 46140017 - 46139950
Alignment:
Q  241 tgaaaacagcttctggacattgttcataagttgttttcagcttattttcataagttctccaagatagc 308  Q
    ||||||||||||   |||||| ||||| | ||||||| ||||| ||||||||||||||||||||||||    
T  46140017 tgaaaacagctttatgacatttttcattacttgtttttagcttgttttcataagttctccaagatagc 46139950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 298
Target Start/End: Original strand, 3927923 - 3928052
Alignment:
Q  168 agggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcat 267  Q
    ||||||| || |||| ||||||||||||  |||||| |  |||||||| ||||||||| || || |||| |||| ||||||  || | |||| | |||||    
T  3927923 agggcctatttggatcggcttatttgaggctatctactagcataagttttgtgagactatttgagagaattttttaaaacaatttat-gacaattttcat 3928021  T
Q  268 aagttgttttcagcttattttcataagttct 298  Q
    ||| | |||||| ||||||||||||||||||    
T  3928022 aagcttttttcaacttattttcataagttct 3928052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 307
Target Start/End: Complemental strand, 9050741 - 9050654
Alignment:
Q  217 tgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcataagttctccaagatag 307  Q
    ||||||||||||  ||||||||| |||||||||| | ||  ||| |||||||| || ||||||||||||||||| ||||||||||||||||    
T  9050741 tgtgagactgttcaaaagaacttatgaaaacagcatatgt-cat-gttcataattt-ttttcagcttattttcacaagttctccaagatag 9050654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 319
Target Start/End: Complemental strand, 11048092 - 11048034
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaata 319  Q
    |||||||||| ||||||||||||||| ||||||||  || |||||||||||| ||||||    
T  11048092 tgttcataagctgttttcagcttattctcataagtcatcgaagatagcctattaaaata 11048034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 307
Target Start/End: Complemental strand, 19719160 - 19719025
Alignment:
Q  169 gggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcata 268  Q
    ||||||||| |||||  ||||| ||||||||||||||||| |||||| | | ||| ||||  | ||||||| |||||||| ||| | |||| ||||||||    
T  19719160 gggcctgtttggatttacttatgtgagcttatctattgacttaagtt-ttttagaatgttcaagagaacttatgaaaacaacttat-gaca-tgttcata 19719064  T
Q  269 agttgttttcagcttattttcataagttctccaagatag 307  Q
    |  |||||||||||||| || ||||||  ||||||||||    
T  19719063 aactgttttcagcttatctttataagtgatccaagatag 19719025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 191 - 316
Target Start/End: Original strand, 33601963 - 33602087
Alignment:
Q  191 ttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttca 290  Q
    ||||||||||||| || |||||||| | ||||||| ||    | ||||| |||||||||||| || ||| | ||||||||   |||||||||||  ||||    
T  33601963 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatg-acacttttcataagcctttttcagcttaaattca 33602061  T
Q  291 taagttctccaagatagcctataaaa 316  Q
    ||||||||| |||||||| |||||||    
T  33602062 taagttctctaagatagcttataaaa 33602087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 261 - 302
Target Start/End: Original strand, 47559606 - 47559647
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctccaa 302  Q
    |||||||||||||||||| ||| |||||||||||||||||||    
T  47559606 tgttcataagttgttttcggctcattttcataagttctccaa 47559647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 317
Target Start/End: Original strand, 21568457 - 21568556
Alignment:
Q  217 tgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaa 316  Q
    |||||||||||| |  ||||||| |||||||||||| |  ||| | |||||||| | |||||| |||| || |||||||||||||| ||||| |||||||    
T  21568457 tgtgagactgtttgggagaacttatgaaaacagcttata-acaattttcataagctcttttcaacttagttccataagttctccaatatagcttataaaa 21568555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 213
Target Start/End: Complemental strand, 32410700 - 32410652
Alignment:
Q  166 taagggcctgt-taggattggcttatttgagcttatctattgacataag 213  Q
    ||||||||||| | |||||||||||||||||||||||||||| ||||||    
T  32410700 taagggcctgtcttggattggcttatttgagcttatctattggcataag 32410652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 317
Target Start/End: Complemental strand, 34744164 - 34744037
Alignment:
Q  189 atttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttatttt 288  Q
    ||||||||||||||| | ||||||| | |||||||||||| | |||||||  |||||| | ||| | |||| | |||| ||| | |||||  ||||||||    
T  34744164 atttgagcttatctactaacataagatttgtgagactgtttggaagaactaatgaaaagaacttat-gacaattttcacaagcttttttcgccttatttt 34744066  T
Q  289 cataagttctccaagatagcctataaaaa 317  Q
     ||||||||||||| ||||| ||| ||||    
T  34744065 tataagttctccaatatagcttatgaaaa 34744037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 317
Target Start/End: Complemental strand, 43648332 - 43648249
Alignment:
Q  233 agaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    ||||||| ||||||||  ||||| ||||  |||||||||| |||||| ||||||||||||  |||||||||||||| ||| ||||    
T  43648332 agaacttatgaaaacatattctg-acatacttcataagttcttttcaacttattttcatattttctccaagatagcttatgaaaa 43648249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 301
Target Start/End: Complemental strand, 46082097 - 46082061
Alignment:
Q  265 cataagttgttttcagcttattttcataagttctcca 301  Q
    |||||||||||||||||||||||||||||| ||||||    
T  46082097 cataagttgttttcagcttattttcataagctctcca 46082061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 48140359 - 48140300
Alignment:
Q  168 agggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgtt 228  Q
    |||||||||| ||||||||||||  ||| |||||||||| |||||||| ||||||||||||    
T  48140359 agggcctgtttggattggcttata-gagtttatctattggcataagttatgtgagactgtt 48140300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 317
Target Start/End: Complemental strand, 529439 - 529384
Alignment:
Q  262 gttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    ||||||||| |||||||| | |||||||||||| ||||||||||||| ||| ||||    
T  529439 gttcataagctgttttcaacatattttcataagctctccaagatagcttatgaaaa 529384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 261 - 308
Target Start/End: Original strand, 2825236 - 2825283
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctccaagatagc 308  Q
    |||||||||||| |||||||||||||| ||||||||||| | ||||||    
T  2825236 tgttcataagttattttcagcttatttccataagttctctaggatagc 2825283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 307
Target Start/End: Complemental strand, 9038203 - 9038131
Alignment:
Q  232 aagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcataagttctccaagatag 307  Q
    |||||||| | |||||||||| || |||| |||||||| |||||||||||||||||||| |||||||||| |||||    
T  9038203 aagaacttataaaaacagcttatg-acat-gttcataa-ttgttttcagcttattttcacaagttctccatgatag 9038131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 272 - 319
Target Start/End: Original strand, 12792579 - 12792626
Alignment:
Q  272 tgttttcagcttattttcataagttctccaagatagcctataaaaata 319  Q
    ||||||||||||||||||||||| ||| ||||||||| ||| ||||||    
T  12792579 tgttttcagcttattttcataagctcttcaagatagcttatgaaaata 12792626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 261 - 307
Target Start/End: Complemental strand, 21247991 - 21247944
Alignment:
Q  261 tgttcataagttgttttcagcttattttca-taagttctccaagatag 307  Q
    ||||||||||||||||| |||||||||||| |||| ||||||||||||    
T  21247991 tgttcataagttgttttaagcttattttcagtaagctctccaagatag 21247944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 238 - 305
Target Start/End: Original strand, 22551389 - 22551454
Alignment:
Q  238 ttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcataagttctccaagat 305  Q
    ||||||||||||||| || |||| ||||| | |||||||||||||||||| |||||| ||||||||||    
T  22551389 ttttgaaaacagcttatg-acat-gttcaaatgttgttttcagcttatttacataagctctccaagat 22551454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 264 - 307
Target Start/End: Original strand, 27378836 - 27378879
Alignment:
Q  264 tcataagttgttttcagcttattttcataagttctccaagatag 307  Q
    ||||||||||||||||| ||||||||||||| |||||| |||||    
T  27378836 tcataagttgttttcagtttattttcataagctctccaggatag 27378879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 256 - 315
Target Start/End: Complemental strand, 30181282 - 30181223
Alignment:
Q  256 gacattgttcataagttgttttcagcttattttcataagttctccaagatagcctataaa 315  Q
    |||||| |||||||| | || |||||||||||||| ||||||||||||||| | ||||||    
T  30181282 gacattattcataagctattatcagcttattttcaaaagttctccaagatatcttataaa 30181223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 319
Target Start/End: Original strand, 43219622 - 43219707
Alignment:
Q  232 aagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaata 319  Q
    |||||||| | |||||||||| || |||| ||||||||| ||||||||||||||| ||||||||  || ||||||| |||| ||||||    
T  43219622 aagaacttatcaaaacagcttatg-acat-gttcataagctgttttcagcttattctcataagtcatcgaagataggctattaaaata 43219707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 266 - 301
Target Start/End: Complemental strand, 44822019 - 44821984
Alignment:
Q  266 ataagttgttttcagcttattttcataagttctcca 301  Q
    |||||||||||||| |||||||||||||||||||||    
T  44822019 ataagttgttttcaacttattttcataagttctcca 44821984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 274 - 317
Target Start/End: Original strand, 46280290 - 46280333
Alignment:
Q  274 ttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||||||| |||||||||||||||||||| ||||| ||||||||    
T  46280290 ttttcagcctattttcataagttctccaatatagcttataaaaa 46280333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 307
Target Start/End: Original strand, 7241336 - 7241383
Alignment:
Q  256 gacattgttcataagttgttttcagcttattttcataagttctccaagatag 307  Q
    |||||||||||||||||||||||||    ||||||||||||||| |||||||    
T  7241336 gacattgttcataagttgttttcag----ttttcataagttctcaaagatag 7241383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 317
Target Start/End: Original strand, 28691745 - 28691896
Alignment:
Q  164 attaagggcctgttaggattggcttatttgagcttatctattgacataagt-tgtgtgagactgttagaaagaacttttgaaaacagcttctggacattg 262  Q
    ||||| || ||||| |||||| |||||||||| ||||||  | |||||||  | |||||||||||| | | || ||| |||||||||||| || || |||    
T  28691745 attaatggtctgtttggattgacttatttgagtttatctgctaacataagcatttgtgagactgttcgga-gatcttatgaaaacagcttatg-ac-ttg 28691841  T
Q  263 ttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    | ||||| ||||| |||| ||||||||||||| |||||| |||||| ||| ||||    
T  28691842 tccataaattgttatcagtttattttcataagatctccaggatagcttatgaaaa 28691896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 307
Target Start/End: Complemental strand, 35007662 - 35007617
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctccaagatag 307  Q
    |||||||||||||||||||||||||||||| ||| |||| |||||||    
T  35007662 tgttcataagttgttttcagcttattttca-aagctctcaaagatag 35007617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 168 - 226
Target Start/End: Original strand, 38138405 - 38138463
Alignment:
Q  168 agggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactg 226  Q
    |||||||||| ||| || |||||||||||||||||||||  |||| || ||||||||||    
T  38138405 agggcctgtttggaatgacttatttgagcttatctattggaataaattctgtgagactg 38138463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 215
Target Start/End: Complemental strand, 46407385 - 46407343
Alignment:
Q  173 ctgttaggattggcttatttgagcttatctattgacataagtt 215  Q
    ||||||||||||||||| ||||||||||||| || ||||||||    
T  46407385 ctgttaggattggcttaattgagcttatctactgccataagtt 46407343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 304
Target Start/End: Complemental strand, 87161 - 87026
Alignment:
Q  167 aagggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttca 266  Q
    ||||| ||||| |||||  |||| ||||||||||||||||||||||||| | | || || || |  |||||||    ||| ||||| | || ||||||      
T  87161 aagggtctgtttggattttcttacttgagcttatctattgacataagttatatcagcctatttgggagaacttacagaaaaagcttat-gatattgttag 87063  T
Q  267 taagttgttttcagcttattttcataagttctccaaga 304  Q
    ||||||||||||||| ||||| ||||||||||||||||    
T  87062 taagttgttttcagc-tatttccataagttctccaaga 87026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 9210967 - 9210918
Alignment:
Q  179 ggattggcttatttgagcttatctattgacataagttgtgtgagactgtt 228  Q
    |||||| |||||||||||||||||| ||| ||||||| | ||||||||||    
T  9210967 ggattgacttatttgagcttatctactgatataagttttctgagactgtt 9210918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 293
Target Start/End: Original strand, 15740533 - 15740593
Alignment:
Q  232 aagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcataa 293  Q
    |||||||| |||||||||||| || |||| || |||||| |||||||| |||||||||||||    
T  15740533 aagaacttatgaaaacagcttatgaacat-gtccataaggtgttttcaacttattttcataa 15740593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 228
Target Start/End: Original strand, 22283554 - 22283619
Alignment:
Q  163 tattaagggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgtt 228  Q
    |||||| ||| |||| |||||| ||||||||| |||||||| || ||||| || ||||||||||||    
T  22283554 tattaacggcttgtttggattgacttatttgaacttatctactgtcataaattttgtgagactgtt 22283619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 306
Target Start/End: Complemental strand, 35267427 - 35267382
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctccaagata 306  Q
    |||||||| ||||||||||||||||||  ||||| |||||||||||    
T  35267427 tgttcataggttgttttcagcttatttctataagctctccaagata 35267382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 306
Target Start/End: Complemental strand, 39280023 - 39279982
Alignment:
Q  265 cataagttgttttcagcttattttcataagttctccaagata 306  Q
    |||||| | ||||||||||||||||| |||||||||||||||    
T  39280023 cataagcttttttcagcttattttcaaaagttctccaagata 39279982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 213
Target Start/End: Complemental strand, 39771918 - 39771873
Alignment:
Q  168 agggcctgttaggattggcttatttgagcttatctattgacataag 213  Q
    |||||||||| || |||  |||||||||||||||||||||||||||    
T  39771918 agggcctgtttgggttgagttatttgagcttatctattgacataag 39771873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 306
Target Start/End: Original strand, 40252128 - 40252157
Alignment:
Q  277 tcagcttattttcataagttctccaagata 306  Q
    ||||||||||||||||||||||||||||||    
T  40252128 tcagcttattttcataagttctccaagata 40252157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 308
Target Start/End: Original strand, 40688993 - 40689038
Alignment:
Q  263 ttcataagttgttttcagcttattttcataagttctccaagatagc 308  Q
    |||||||| |||||| |||||||||||||||||| |||| ||||||    
T  40688993 ttcataagctgttttgagcttattttcataagttatccaggatagc 40689038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 313
Target Start/End: Original strand, 43250681 - 43250756
Alignment:
Q  236 acttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcataagttctccaagatagcctata 313  Q
    |||| |||||||||||| || |||| |||| |||||||||||||| |||| |||||||| ||||||| ||||| ||||    
T  43250681 acttatgaaaacagcttatg-acat-gttcgtaagttgttttcagtttatattcataagctctccaaaatagcttata 43250756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 294
Target Start/End: Original strand, 47134766 - 47134795
Alignment:
Q  265 cataagttgttttcagcttattttcataag 294  Q
    ||||||||||||||||||||||||||||||    
T  47134766 cataagttgttttcagcttattttcataag 47134795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 317
Target Start/End: Original strand, 48917362 - 48917407
Alignment:
Q  272 tgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    ||||| ||||||||||||||||| ||||||||||||| ||| ||||    
T  48917362 tgtttccagcttattttcataagctctccaagatagcttatgaaaa 48917407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 292
Target Start/End: Original strand, 6226164 - 6226192
Alignment:
Q  264 tcataagttgttttcagcttattttcata 292  Q
    |||||||||||||||||||||||||||||    
T  6226164 tcataagttgttttcagcttattttcata 6226192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 9423599 - 9423655
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||||||||||||||||||||||||||  | ||| |||||| |||||| ||| ||||    
T  9423599 tgttcataagttgttttcagcttatttcaagaagctctccaggatagcttattaaaa 9423655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 18962496 - 18962556
Alignment:
Q  168 agggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgtt 228  Q
    |||||||||| ||||||  ||||| || |||||||| ||||||||||| ||| ||||||||    
T  18962496 agggcctgtttggattgagttattcgatcttatctactgacataagttttgttagactgtt 18962556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 317
Target Start/End: Original strand, 24363610 - 24363662
Alignment:
Q  265 cataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    ||||||||||||||||||||||| |||||  |||||| |||||| ||| ||||    
T  24363610 cataagttgttttcagcttatttccataacctctccaggatagcttatgaaaa 24363662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 40371561 - 40371601
Alignment:
Q  162 atattaagggcctgttaggattggcttatttgagcttatct 202  Q
    ||||||||||| |||| |||||| |||||||||||||||||    
T  40371561 atattaagggcatgtttggattgacttatttgagcttatct 40371601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 313
Target Start/End: Complemental strand, 42656560 - 42656508
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctccaagatagcctata 313  Q
    |||||||||  ||||| | ||||||||||||||| ||||||||||||| ||||    
T  42656560 tgttcataaaatgtttgcggcttattttcataagctctccaagatagcttata 42656508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 44822111 - 44822055
Alignment:
Q  172 cctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgtt 228  Q
    |||||| |||||| |||||||||| ||||||  ||||||||||| ||||||| ||||    
T  44822111 cctgtttggattgacttatttgagtttatctgctgacataagttttgtgagattgtt 44822055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 317
Target Start/End: Original strand, 47130802 - 47130846
Alignment:
Q  273 gttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    ||||||| |||||||||| ||||||||||||||||| ||| ||||    
T  47130802 gttttcaacttattttcacaagttctccaagatagcttatgaaaa 47130846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 174; Significance: 1e-93; HSPs: 105)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 166 - 351
Target Start/End: Original strand, 7928209 - 7928394
Alignment:
Q  166 taagggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttc 265  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  7928209 taagggcctgtttggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttatggacattgttc 7928308  T
Q  266 ataagttgttttcagcttattttcataagttctccaagatagcctataaaaataaaacttacacgacaacaatttgatttaatttt 351  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  7928309 ataagttgttttcagcttattttcataagttctccaagatagcctgtaaaaataaaacttacacgacaacaatttgatttaatttt 7928394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 168 - 302
Target Start/End: Complemental strand, 15305831 - 15305698
Alignment:
Q  168 agggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcat 267  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||| |  ||||||||||| |||| ||| ||| || | |||||    
T  15305831 agggcctgtttggattggcttatttgagcttatctattgacataagttttgtgaaactgtttggtagaacttttgacaacaacttatgg-caattttcat 15305733  T
Q  268 aagttgttttcagcttattttcataagttctccaa 302  Q
    ||||| |||||| ||||||||||||||||||||||    
T  15305732 aagtttttttcaacttattttcataagttctccaa 15305698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 168 - 308
Target Start/End: Complemental strand, 4607082 - 4606943
Alignment:
Q  168 agggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcat 267  Q
    |||||||||| |||||||||||||||||||||||||   | ||||||| ||||||||| || |  ||||||| |||||||| ||| || |||||||||||    
T  4607082 agggcctgtttggattggcttatttgagcttatctaccaatataagttttgtgagactatttgggagaacttgtgaaaacaacttatg-acattgttcat 4606984  T
Q  268 aagttgttttcagcttattttcataagttctccaagatagc 308  Q
     || || ||| ||||||||||||||||||||||||||||||    
T  4606983 gagctgcttttagcttattttcataagttctccaagatagc 4606943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 184 - 308
Target Start/End: Complemental strand, 750811 - 750688
Alignment:
Q  184 ggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagctt 283  Q
    |||||||||||| ||||||  || |||| ||| ||||||| |||| | |||||||| |||||| ||||  || |||||||||||||| |||||| |||||    
T  750811 ggcttatttgagtttatctcctggcatatgttttgtgagagtgtttgcaagaacttatgaaaagagctaatg-acattgttcataagctgttttgagctt 750713  T
Q  284 attttcataagttctccaagatagc 308  Q
    |||| ||||||||||||||||||||    
T  750712 atttgcataagttctccaagatagc 750688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 186 - 317
Target Start/End: Complemental strand, 9174954 - 9174824
Alignment:
Q  186 cttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttat 285  Q
    ||||||||||||||||||||| |||||||| |||||||||||| ||  |  ||| | |||||| ||| | ||||||||||||||| | ||||||||||||    
T  9174954 cttatttgagcttatctattggcataagttatgtgagactgtttgagggggcttgttaaaacaacttat-gacattgttcataagctattttcagcttat 9174856  T
Q  286 tttcataagttctccaagatagcctataaaaa 317  Q
    ||||||||| |||  |||||||| ||| ||||    
T  9174855 tttcataagctctgtaagatagcttatgaaaa 9174824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 187 - 317
Target Start/End: Complemental strand, 1626038 - 1625909
Alignment:
Q  187 ttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttatt 286  Q
    |||||||||||||||   ||||||||||| ||| ||||| || || ||||||| |||||  ||||| || ||| |||||||||| ||||||||||| |||    
T  1626038 ttatttgagcttatcccctgacataagttttgtaagactatttgagagaacttatgaaagtagcttatg-acaatgttcataagatgttttcagctgatt 1625940  T
Q  287 ttcataagttctccaagatagcctataaaaa 317  Q
    ||| |||||||||||||||||| ||| ||||    
T  1625939 ttcgtaagttctccaagatagcttatgaaaa 1625909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 172 - 317
Target Start/End: Original strand, 26143559 - 26143701
Alignment:
Q  172 cctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagt 271  Q
    |||||| |||||||||| |||||||||||||| |||||||| || ||  |||||||| |  |||||||  ||||||| ||| ||  ||||||||| | ||    
T  26143559 cctgtttggattggcttgtttgagcttatctactgacataaattttg--agactgtttgggagaacttacgaaaacaacttatgt-cattgttcacaggt 26143655  T
Q  272 tgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    | |||||||||||||||||||||||||||||| |||| ||| ||||    
T  26143656 tattttcagcttattttcataagttctccaagttagcttatgaaaa 26143701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 170 - 252
Target Start/End: Complemental strand, 31744453 - 31744371
Alignment:
Q  170 ggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagctt 252  Q
    |||||||| ||||||||||||||| |||||||||  |||||||||| | |||||||||| || ||||||||||||||||||||    
T  31744453 ggcctgtttggattggcttatttgggcttatctaccgacataagttttctgagactgtttgagagaacttttgaaaacagctt 31744371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 179 - 299
Target Start/End: Original strand, 40682316 - 40682438
Alignment:
Q  179 ggattggcttatttgagcttatctatt---gacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgtt 275  Q
    ||||||||||||||||| || |||| |   |||||||||| ||||||| |||| |  ||||||| | |||| ||||| || |||||||||||||||||||    
T  40682316 ggattggcttatttgagtttgtctactactgacataagttttgtgagattgtttgggagaacttgttaaaatagcttatg-acattgttcataagttgtt 40682414  T
Q  276 ttcagcttattttcataagttctc 299  Q
    |||| |||||||||||||||||||    
T  40682415 ttcaacttattttcataagttctc 40682438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 179 - 252
Target Start/End: Complemental strand, 44590170 - 44590097
Alignment:
Q  179 ggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagctt 252  Q
    ||||||||||||||||| |||||||| |||||||||| |||||||| ||| |||||||||| ||||||||||||    
T  44590170 ggattggcttatttgagtttatctatagacataagttttgtgagaccgtttgaaagaacttatgaaaacagctt 44590097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 207 - 319
Target Start/End: Original strand, 7035519 - 7035630
Alignment:
Q  207 acataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcataagttctccaagata 306  Q
    ||||||||| ||||||||||||   |||||||| || ||||||||| || |||  ||||||||| ||||||| ||||||||||||||||| |||||||||    
T  7035519 acataagttttgtgagactgttttgaagaacttatggaaacagcttatg-acacagttcataaggtgttttccgcttattttcataagttttccaagata 7035617  T
Q  307 gcctataaaaata 319  Q
    |  ||||||||||    
T  7035618 gtttataaaaata 7035630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 168 - 299
Target Start/End: Complemental strand, 13325727 - 13325597
Alignment:
Q  168 agggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcat 267  Q
    ||||| |||| ||||  ||||||||||||||||| ||||| ||||||| | ||||| |||| |  |||||||||||||||||||| | ||||||   |||    
T  13325727 agggcttgtttggatcagcttatttgagcttatcaattgatataagttttatgagattgttcgggagaacttttgaaaacagcttat-gacatttcacat 13325629  T
Q  268 aagttgttttcagcttattttcataagttctc 299  Q
    ||| | ||||||||| ||||||||||||||||    
T  13325628 aagcttttttcagctcattttcataagttctc 13325597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 194 - 317
Target Start/End: Complemental strand, 18066259 - 18066137
Alignment:
Q  194 agcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcataa 293  Q
    |||||||||| ||||||||||| ||||| ||||||    | ||||| |||||||||||| || |||||| ||||||| | |||||| ||||||||| |||    
T  18066259 agcttatctactgacataagttttgtgaaactgttttgtacaacttatgaaaacagcttatg-acattgctcataagctattttcaccttattttcttaa 18066161  T
Q  294 gttctccaagatagcctataaaaa 317  Q
    ||||||||||||||| ||| ||||    
T  18066160 gttctccaagatagcttatgaaaa 18066137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 179 - 307
Target Start/End: Original strand, 33319740 - 33319863
Alignment:
Q  179 ggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttc 278  Q
    |||||||||||||||||||| |||| || |||||||||||  |||||||| |  |||||||||  ||| ||||| || |||||  | ||||| | |||||    
T  33319740 ggattggcttatttgagcttgtctactggcataagttgtg--agactgtttgggagaacttttataaatagcttatg-acatt--taataagcttttttc 33319834  T
Q  279 agcttattttcataagttctccaagatag 307  Q
    |||||||||||||||||||||||||||||    
T  33319835 agcttattttcataagttctccaagatag 33319863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 260 - 317
Target Start/End: Original strand, 35379020 - 35379077
Alignment:
Q  260 ttgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||    
T  35379020 ttgttcataagttgttttcagcttattttcataagctctccaagatagcttatgaaaa 35379077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 168 - 308
Target Start/End: Original strand, 41812005 - 41812143
Alignment:
Q  168 agggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcat 267  Q
    ||||| |||| ||||||||||||||||||||||||   | || |||||  ||||| ||||| |  |||||||||||||||||||| | |||||| |||||    
T  41812005 agggcttgtttggattggcttatttgagcttatctgcagtcaaaagtttagtgaggctgtttgggagaacttttgaaaacagcttat-gacatttttcat 41812103  T
Q  268 aagttgttttcagcttattttcataagttctccaagatagc 308  Q
    ||| | |||||| |||| |||| |||||| |||||||||||    
T  41812104 aagcttttttcaactta-tttcctaagttttccaagatagc 41812143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 209 - 308
Target Start/End: Complemental strand, 16451234 - 16451136
Alignment:
Q  209 ataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcataagttctccaagatagc 308  Q
    ||||||| |||||||| ||| |  ||||||| |||||||| ||| || ||||||||||| || |||||||||||||||||||  ||||||||||||||||    
T  16451234 ataagttctgtgagaccgtttgggagaacttatgaaaacaacttatg-acattgttcatgagctgttttcagcttattttcacgagttctccaagatagc 16451136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 228
Target Start/End: Complemental strand, 3312236 - 3312174
Alignment:
Q  166 taagggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgtt 228  Q
    ||||||| |||| ||||||||||||||||||||||||| |||| |||||| ||||||||||||    
T  3312236 taagggcttgtttggattggcttatttgagcttatctactgacgtaagttttgtgagactgtt 3312174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 171 - 317
Target Start/End: Complemental strand, 45229665 - 45229520
Alignment:
Q  171 gcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataag 270  Q
    ||||||| ||||||| | ||||||||||||||| || |||||||| ||  | || ||| |  ||||||| |||||| | ||| | |||||| ||||| ||    
T  45229665 gcctgtttggattggttgatttgagcttatctactggcataagttatgccacaccgtttgggagaacttatgaaaagaccttat-gacatttttcattag 45229567  T
Q  271 ttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
     | |||||||||||||||||||||||||| |||||||| ||| ||||    
T  45229566 cttttttcagcttattttcataagttctcgaagatagcttatgaaaa 45229520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 173 - 317
Target Start/End: Complemental strand, 8017586 - 8017443
Alignment:
Q  173 ctgttaggattggcttatttgagcttatctattgacataagttgt-gtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagt 271  Q
    ||||| |||||| |||||||||| |||||||||||||||||   | ||| || | || |  ||||||| |||||||||||| | || | ||||||||| |    
T  8017586 ctgtttggattgacttatttgaggttatctattgacataagcacttgtgcgattatttgggagaacttatgaaaacagcttat-gata-tgttcataatt 8017489  T
Q  272 tgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    ||||||| || |||||||||||||||||||||||||| ||| ||||    
T  8017488 tgttttctgcgtattttcataagttctccaagatagcttatgaaaa 8017443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 168 - 317
Target Start/End: Complemental strand, 26202185 - 26202037
Alignment:
Q  168 agggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcat 267  Q
    |||||||||| |||||  ||||||||| |||||||  ||||||||||| ||||||| | || |  |||| || ||| |||| ||| || ||| | |||||    
T  26202185 agggcctgtttggattaacttatttgaacttatctgctgacataagttttgtgagattctttgctagaatttatgagaacaacttatg-acaattttcat 26202087  T
Q  268 aagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    ||| | |||||| |||||||||||||||||||||| ||| | ||||||||    
T  26202086 aagcttttttcaacttattttcataagttctccaatatatcttataaaaa 26202037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 171 - 248
Target Start/End: Complemental strand, 27317533 - 27317456
Alignment:
Q  171 gcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaaca 248  Q
    ||||||| |||||| ||||||||||||||||||  |||||||||| | |||||||||| || ||||||| ||||||||    
T  27317533 gcctgtttggattgacttatttgagcttatctaccgacataagttttatgagactgtttgagagaacttatgaaaaca 27317456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 171 - 308
Target Start/End: Complemental strand, 36114573 - 36114437
Alignment:
Q  171 gcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataag 270  Q
    |||||||  ||||||||||||||| |||| ||||||||||||||   || |||||||| |  ||||||| | |||||| ||  || | |||||||| |||    
T  36114573 gcctgtttcgattggcttatttgaacttacctattgacataagtacagtcagactgtttgggagaacttgttaaaacaactaatgaa-attgttcaaaag 36114475  T
Q  271 ttgttttcagcttattttcataagttctccaagatagc 308  Q
     |||||| |||||||||| ||||| |||||||||||||    
T  36114474 ctgtttttagcttatttttataagatctccaagatagc 36114437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 172 - 252
Target Start/End: Original strand, 42659128 - 42659208
Alignment:
Q  172 cctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagctt 252  Q
    |||||| || ||||||||||||||||||| || || |||||||| |||||||||||| |  |||| |||||||||||||||    
T  42659128 cctgtttgggttggcttatttgagcttatttactggcataagttttgtgagactgtttgggagaagttttgaaaacagctt 42659208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 261 - 308
Target Start/End: Original strand, 29316780 - 29316827
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctccaagatagc 308  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||    
T  29316780 tgttcataagttcttttcagcttatttccataagttctccaagatagc 29316827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 246
Target Start/End: Complemental strand, 30331913 - 30331830
Alignment:
Q  163 tattaagggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaa 246  Q
    |||| ||||| |||| |||||| ||||||| |||||||||| ||||||||||| |||||||||||| |  ||||||| ||||||    
T  30331913 tatttagggcttgtttggattgacttatttcagcttatctactgacataagttttgtgagactgtttgggagaacttatgaaaa 30331830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 179 - 306
Target Start/End: Original strand, 31561666 - 31561792
Alignment:
Q  179 ggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttc 278  Q
    |||||| |||||||||| ||||||| | ||||||||| ||| | |||||| |  | |||||||||||||||| | | ||| || |||||||| |  |||     
T  31561666 ggattgacttatttgagattatctactaacataagttttgtaaaactgtttgggaaaacttttgaaaacagcatat-gacgtttttcataagattgttta 31561764  T
Q  279 agcttattttcataagttctccaagata 306  Q
    |||||| |||||||||||||||||||||    
T  31561765 agcttactttcataagttctccaagata 31561792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 190 - 308
Target Start/End: Complemental strand, 41851670 - 41851553
Alignment:
Q  190 tttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttc 289  Q
    |||||||||||||||||||| ||||| |||||||||| | |  |||| || || ||||| ||| | |||| | |||||||| | || |||||||| ||||    
T  41851670 tttgagcttatctattgacaaaagttttgtgagactgattgggagaatttatggaaacaacttat-gacacttttcataagcttttctcagcttaatttc 41851572  T
Q  290 ataagttctccaagatagc 308  Q
    |||| ||||||||||||||    
T  41851571 ataaattctccaagatagc 41851553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 194 - 317
Target Start/End: Original strand, 43279466 - 43279590
Alignment:
Q  194 agcttatctattgacataagttgtgtgagactgttag--aaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcat 291  Q
    |||||||||| |  |||||||| |||||||||||| |  | |||| || |||||||||||| || ||| | |||||||| | |||||| ||||||||||     
T  43279466 agcttatctactagcataagttttgtgagactgtttgggagagaatttatgaaaacagcttatg-acaattttcataagcttttttcaacttattttcac 43279564  T
Q  292 aagttctccaagatagcctataaaaa 317  Q
    ||||||||||| ||||| ||||||||    
T  43279565 aagttctccaatatagcttataaaaa 43279590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 261 - 319
Target Start/End: Complemental strand, 44443386 - 44443328
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaata 319  Q
    |||||||||||||||||||||||||||||||| | |||| |||||||| ||| ||||||    
T  44443386 tgttcataagttgttttcagcttattttcatatgctctcaaagatagcttatgaaaata 44443328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 306
Target Start/End: Original strand, 5902512 - 5902599
Alignment:
Q  217 tgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcataagttctccaagata 306  Q
    |||||||||||| | |||||||| |||||||||||| || |||| ||||||||  |||||||||||| |||| ||| |||||||||||||    
T  5902512 tgtgagactgtttggaagaacttatgaaaacagcttatg-acat-gttcataaactgttttcagcttgtttttatatgttctccaagata 5902599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 317
Target Start/End: Complemental strand, 26626943 - 26626882
Alignment:
Q  256 gacattgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    ||||||||||||||  ||||||||| ||||||||||||||||| ||||||||| ||| ||||    
T  26626943 gacattgttcataatctgttttcaggttattttcataagttctgcaagatagcttatgaaaa 26626882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 36534913 - 36534781
Alignment:
Q  180 gattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttca 279  Q
    ||||||||||||||||||||| |  |  |||||||| |||||||||||| |  | ||||| |||||||||||| |  | |||||||||||  | ||||||    
T  36534913 gattggcttatttgagcttatatgctttcataagttttgtgagactgtttgggataacttatgaaaacagcttataaa-attgttcataatctattttca 36534815  T
Q  280 gcttattttcataagttctccaagatagcctata 313  Q
    |||||||||||| | |||||| | ||||| ||||    
T  36534814 gcttattttcattaattctcctatatagcttata 36534781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 3611296 - 3611244
Alignment:
Q  256 gacattgttcataagttgttttcagcttattttcataagttctccaagatagc 308  Q
    |||||| |||||||  |||||| ||||||||||||||||||||||||||||||    
T  3611296 gacattattcataaactgtttttagcttattttcataagttctccaagatagc 3611244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 256 - 296
Target Start/End: Original strand, 5365577 - 5365617
Alignment:
Q  256 gacattgttcataagttgttttcagcttattttcataagtt 296  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  5365577 gacattgttcataagttgttttcagcttattttcacaagtt 5365617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 241 - 317
Target Start/End: Complemental strand, 40279351 - 40279276
Alignment:
Q  241 tgaaaacagcttctggacattgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||||||| ||| ||| ||||||||||||  ||||||||||| ||||||||||||||||||| ||||| ||| ||||    
T  40279351 tgaaaacaacttatgg-cattgttcataaactgttttcagctaattttcataagttctccaatatagcttatgaaaa 40279276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 241 - 317
Target Start/End: Complemental strand, 40279421 - 40279346
Alignment:
Q  241 tgaaaacagcttctggacattgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||||||| ||| ||| ||||||||||||  ||||||||||| ||||||||||||||||||| ||||| ||| ||||    
T  40279421 tgaaaacaacttatgg-cattgttcataaactgttttcagctaattttcataagttctccaatatagcttatgaaaa 40279346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 260 - 300
Target Start/End: Complemental strand, 43511151 - 43511111
Alignment:
Q  260 ttgttcataagttgttttcagcttattttcataagttctcc 300  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  43511151 ttgttcataagctgttttcagcttattttcataagttctcc 43511111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 265 - 308
Target Start/End: Original strand, 1893290 - 1893333
Alignment:
Q  265 cataagttgttttcagcttattttcataagttctccaagatagc 308  Q
    |||||||| ||||||||||||||||| |||||||||||||||||    
T  1893290 cataagttattttcagcttattttcacaagttctccaagatagc 1893333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 299
Target Start/End: Complemental strand, 2416458 - 2416340
Alignment:
Q  180 gattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttca 279  Q
    ||||| |||||||||| ||||||| | ||||||||| ||||| |||| | | |||||||| | |||||||||| ||  ||||||||| ||| |  |||||    
T  2416458 gattgacttatttgagtttatctactaacataagttttgtgaaactgcttggaagaacttattaaaacagcttttgt-cattgttcacaagctaatttca 2416360  T
Q  280 gcttattttcataagttctc 299  Q
    || || ||||||||||||||    
T  2416359 gcatactttcataagttctc 2416340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 307
Target Start/End: Complemental strand, 3978744 - 3978609
Alignment:
Q  172 cctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagt 271  Q
    |||||| |||||  ||||||| || |||| || ||| ||||||| | ||||||||||  | ||||| | ||||||||| ||   || |||||| |||||     
T  3978744 cctgtttggattaacttatttcagtttatgtaatgatataagttttatgagactgtttcagagaacatatgaaaacagttttaagatattgtttataagc 3978645  T
Q  272 tgttttcagcttattttcataagttctccaagatag 307  Q
     |||||||||||||||||||| ||| ||||||||||    
T  3978644 agttttcagcttattttcatacgttgtccaagatag 3978609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 261 - 308
Target Start/End: Original strand, 12313178 - 12313225
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctccaagatagc 308  Q
    ||||||||||||| ||||| |||||||||||||| |||||||||||||    
T  12313178 tgttcataagttgatttcaccttattttcataagctctccaagatagc 12313225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 16398184 - 16398121
Alignment:
Q  256 gacattgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaata 319  Q
    ||||||| || |||| ||||||||||||||||||||||||||||||| ||| | ||| ||||||    
T  16398184 gacattgctcgtaagctgttttcagcttattttcataagttctccaacataacttatgaaaata 16398121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 185 - 248
Target Start/End: Complemental strand, 21828102 - 21828039
Alignment:
Q  185 gcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaaca 248  Q
    |||||||||| |||||||| || |||||||| ||||||||||||   |||||||||||||||||    
T  21828102 gcttatttgaccttatctactggcataagttttgtgagactgtttagaagaacttttgaaaaca 21828039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 308
Target Start/End: Original strand, 29628673 - 29628795
Alignment:
Q  186 cttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacag-cttctggacattgttcataagttgttttcagctta 284  Q
    |||||||||||||||||| || |||||||| |||||||| ||  | |||||||| | |||| |  ||| |  | ||||||||||| ||||||||||||||    
T  29628673 cttatttgagcttatctactgtcataagttttgtgagacagtctggaagaacttataaaaaaaatcttataaa-attgttcataaattgttttcagctta 29628771  T
Q  285 ttttcataagttctccaagatagc 308  Q
    ||| ||||| || |||||||||||    
T  29628772 tttccataaattttccaagatagc 29628795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 213
Target Start/End: Complemental strand, 40759315 - 40759272
Alignment:
Q  170 ggcctgttaggattggcttatttgagcttatctattgacataag 213  Q
    |||||||| |||||| ||||||||||||||||||||||||||||    
T  40759315 ggcctgtttggattgccttatttgagcttatctattgacataag 40759272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 301
Target Start/End: Complemental strand, 41407668 - 41407629
Alignment:
Q  262 gttcataagttgttttcagcttattttcataagttctcca 301  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  41407668 gttcataagttgttttcagcttatttttataagttctcca 41407629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 308
Target Start/End: Complemental strand, 43036700 - 43036575
Alignment:
Q  181 attggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcag 280  Q
    ||||| ||||||||||||||||| | ||||||||| ||||||| | || |  | ||||| ||| |||| ||| | |||||| |||||||  |||||| ||    
T  43036700 attggattatttgagcttatctagttacataagttttgtgagagtatttgggaaaacttatgagaacatcttat-gacattattcataaactgtttt-ag 43036603  T
Q  281 cttattttcataagttctccaagatagc 308  Q
    |||| ||||||||||| |||||||||||    
T  43036602 cttactttcataagttttccaagatagc 43036575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 308
Target Start/End: Complemental strand, 12464724 - 12464682
Alignment:
Q  266 ataagttgttttcagcttattttcataagttctccaagatagc 308  Q
    |||||||||| |||||||||||||||||||||| |||||||||    
T  12464724 ataagttgttctcagcttattttcataagttcttcaagatagc 12464682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 317
Target Start/End: Original strand, 39659425 - 39659570
Alignment:
Q  171 gcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataag 270  Q
    ||||||| ||||||||||  ||||||||||||| |||||||||||  ||||| ||||  || |||||||  ||||||||||| | ||||   ||  ||||    
T  39659425 gcctgtttggattggcttgcttgagcttatctactgacataagtttcgtgaggctgtctgagagaacttacgaaaacagcttat-gacaaattttctaag 39659523  T
Q  271 ttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
     | || ||| ||||| ||||||||||||| || ||||| ||||||||    
T  39659524 cttttgtcaccttatcttcataagttctctaatatagcttataaaaa 39659570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 308
Target Start/End: Complemental strand, 42458008 - 42457966
Alignment:
Q  266 ataagttgttttcagcttattttcataagttctccaagatagc 308  Q
    ||||||||||||||||||||||||||| |||||| ||||||||    
T  42458008 ataagttgttttcagcttattttcatatgttctctaagatagc 42457966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 263 - 296
Target Start/End: Original strand, 1493520 - 1493553
Alignment:
Q  263 ttcataagttgttttcagcttattttcataagtt 296  Q
    ||||||||||||||||||||||||||||||||||    
T  1493520 ttcataagttgttttcagcttattttcataagtt 1493553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 317
Target Start/End: Original strand, 6718542 - 6718594
Alignment:
Q  264 tcataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    ||||||| ||||||||||||||||||||||||| ||||||||| | ||||||||    
T  6718542 tcataagctgttttcagcttattttcataagtt-tccaagatatcttataaaaa 6718594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 319
Target Start/End: Original strand, 12464491 - 12464536
Alignment:
Q  274 ttttcagcttattttcataagttctccaagatagcctataaaaata 319  Q
    ||||||||||||||||| ||||||||||||||||| ||| ||||||    
T  12464491 ttttcagcttattttcacaagttctccaagatagcttatgaaaata 12464536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 174 - 299
Target Start/End: Original strand, 15757577 - 15757701
Alignment:
Q  174 tgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttg 273  Q
    |||| ||| ||| |||||||||||||| || || |||||||| |||||||||| | |  |||| || ||||||| |||| | |||| | |||| ||| |     
T  15757577 tgtttggaatggtttatttgagcttatttactggcataagttttgtgagactgcttgggagaatttatgaaaactgcttat-gacaattttcagaagctt 15757675  T
Q  274 ttttcagcttattttcataagttctc 299  Q
    ||||||||||||||||||| ||||||    
T  15757676 ttttcagcttattttcatacgttctc 15757701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 263 - 308
Target Start/End: Complemental strand, 16867802 - 16867757
Alignment:
Q  263 ttcataagttgttttcagcttattttcataagttctccaagatagc 308  Q
    ||||||||||||||||| ||||||| |||||| |||||||||||||    
T  16867802 ttcataagttgttttcaacttatttccataagctctccaagatagc 16867757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 233 - 302
Target Start/End: Original strand, 28677638 - 28677705
Alignment:
Q  233 agaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcataagttctccaa 302  Q
    ||||||| |||||||||||| || ||||| |||||||||||||||| |||||||| |||||| |||||||    
T  28677638 agaacttatgaaaacagcttatg-acatt-ttcataagttgttttcggcttatttccataagctctccaa 28677705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 260 - 305
Target Start/End: Original strand, 35378536 - 35378581
Alignment:
Q  260 ttgttcataagttgttttcagcttattttcataagttctccaagat 305  Q
    ||||||||||||| ||||||||||||||||||||| | ||||||||    
T  35378536 ttgttcataagttattttcagcttattttcataagctatccaagat 35378581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 212
Target Start/End: Complemental strand, 14319507 - 14319463
Alignment:
Q  168 agggcctgttaggattggcttatttgagcttatctattgacataa 212  Q
    |||||||||| | | ||||||||||||||||||||||||||||||    
T  14319507 agggcctgtttgtaatggcttatttgagcttatctattgacataa 14319463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 38078415 - 38078471
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    ||||||||||||||||| |||| |||| |||||| ||||||||||||| ||| ||||    
T  38078415 tgttcataagttgttttgagctcatttacataagctctccaagatagcttatgaaaa 38078471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 317
Target Start/End: Complemental strand, 40279281 - 40279206
Alignment:
Q  241 tgaaaacagcttctggacattgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||||||| ||| ||| ||||||||||||  | ||||||||| ||||||||||||||||||| ||||| ||| ||||    
T  40279281 tgaaaacaacttatgg-cattgttcataaactattttcagctaattttcataagttctccaacatagcttatgaaaa 40279206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 317
Target Start/End: Complemental strand, 40279476 - 40279416
Alignment:
Q  257 acattgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    ||||||| |||||  |||||||| |||||||||||||||||||||| ||||| ||| ||||    
T  40279476 acattgtccataaactgttttcaacttattttcataagttctccaatatagcttatgaaaa 40279416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 42868394 - 42868454
Alignment:
Q  168 agggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgtt 228  Q
    |||||||||| |||||| ||||||||||||||||||||| |||| |||  |||| ||||||    
T  42868394 agggcctgtttggattgccttatttgagcttatctattggcatacgtttcgtgacactgtt 42868454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 272 - 319
Target Start/End: Complemental strand, 680557 - 680510
Alignment:
Q  272 tgttttcagcttattttcataagttctccaagatagcctataaaaata 319  Q
    ||||||||||||||||||| ||||||| ||||||||| ||| ||||||    
T  680557 tgttttcagcttattttcacaagttcttcaagatagcttatgaaaata 680510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 173 - 300
Target Start/End: Complemental strand, 2142806 - 2142680
Alignment:
Q  173 ctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagtt 272  Q
    ||||| || ||| |||||||||| |||||||    |||||||| | |||||||||| |  ||||||| ||||||||  || || ||| ||||||| || |    
T  2142806 ctgtttggtttgacttatttgagtttatctacatgcataagttttatgagactgtttgggagaacttatgaaaacaagttgtg-acaatgttcattagct 2142708  T
Q  273 gttttcagcttattttcataagttctcc 300  Q
    ||||| ||||||||||||||| ||||||    
T  2142707 gtttttagcttattttcataaattctcc 2142680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 168 - 307
Target Start/End: Complemental strand, 11864057 - 11863920
Alignment:
Q  168 agggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcat 267  Q
    |||||||||| |||||||||||||||  ||||| || || | |||| | |||||||||||| |  ||||| |||||||||| ||| | |||||| |||||    
T  11864057 agggcctgtttggattggcttatttggtcttatttactggc-taaggtctgtgagactgtttgggagaacatttgaaaacaacttat-gacatttttcat 11863960  T
Q  268 aagttgttttcagcttattttcataagttctccaagatag 307  Q
    ||  | |||| | |||||||| ||||||||| ||| ||||    
T  11863959 aaactttttttaacttattttaataagttcttcaatatag 11863920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 173 - 224
Target Start/End: Complemental strand, 18179101 - 18179050
Alignment:
Q  173 ctgttaggattggcttatttgagcttatctattgacataagttgtgtgagac 224  Q
    ||||| |||||| |||||||||||||||||| | ||||||||| ||||||||    
T  18179101 ctgtttggattgacttatttgagcttatctactaacataagttttgtgagac 18179050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 256 - 299
Target Start/End: Complemental strand, 21788384 - 21788341
Alignment:
Q  256 gacattgttcataagttgttttcagcttattttcataagttctc 299  Q
    ||||||||||||  |||||||||| |||||||||||||||||||    
T  21788384 gacattgttcatttgttgttttcaacttattttcataagttctc 21788341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 169 - 317
Target Start/End: Complemental strand, 32592744 - 32592595
Alignment:
Q  169 gggcctgttaggattggcttat--ttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttca 266  Q
    ||||||||| ||||||||||||  || |||||||||  || |||||||| || ||| || || |  ||||||| |||||| |||||  | ||| | ||||    
T  32592744 gggcctgtttggattggcttatatttaagcttatctgatggcataagttttgggagtctatttgggagaacttatgaaaatagcttacg-acaattttca 32592646  T
Q  267 taagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||| | || ||| |||||||||||||||||||||| || || ||||||||    
T  32592645 taagcttttctcaacttattttcataagttctccaatattgcttataaaaa 32592595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 265 - 308
Target Start/End: Original strand, 35993389 - 35993432
Alignment:
Q  265 cataagttgttttcagcttattttcataagttctccaagatagc 308  Q
    ||||| ||||||||||||||||||||||||||||| | ||||||    
T  35993389 cataaattgttttcagcttattttcataagttctctatgatagc 35993432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 261 - 308
Target Start/End: Original strand, 43199789 - 43199836
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctccaagatagc 308  Q
    |||| ||||||||||||||||||| |||||||||  ||||||||||||    
T  43199789 tgtttataagttgttttcagcttaatttcataagccctccaagatagc 43199836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 294
Target Start/End: Original strand, 43717117 - 43717174
Alignment:
Q  235 aacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcataag 294  Q
    ||||| ||||||||||||  ||||||| |||||| |||||||||||||||||||||||||    
T  43717117 aacttatgaaaacagctta-ggacatt-ttcataggttgttttcagcttattttcataag 43717174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 261 - 308
Target Start/End: Original strand, 43911004 - 43911051
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctccaagatagc 308  Q
    |||||||||||||||||||||||||| ||| ||| | |||||||||||    
T  43911004 tgttcataagttgttttcagcttattatcacaagctttccaagatagc 43911051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 172 - 307
Target Start/End: Complemental strand, 44119935 - 44119801
Alignment:
Q  172 cctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagt 271  Q
    |||||| |||||||||||||||||||||  |  ||||||||||| ||||| |||||| || |||| ||    || |||||| | ||||||||||||||      
T  44119935 cctgtttggattggcttatttgagcttacatgctgacataagttttgtgaaactgtttgagagaatttacataagcagcttat-gacattgttcataaaa 44119837  T
Q  272 tgttttcagcttattttcataagttctccaagatag 307  Q
       ||| |||||||||| ||| ||||||||||||||    
T  44119836 aaatttgagcttatttttatacgttctccaagatag 44119801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 296
Target Start/End: Complemental strand, 449986 - 449877
Alignment:
Q  186 cttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttat 285  Q
    |||||||||||||||||| |  |||||||| | ||||| |||| |  || ||||||||||||||||| | |||||| |||||||| | |||| | ||||     
T  449986 cttatttgagcttatctactagcataagttttatgagattgtttgggaggacttttgaaaacagcttat-gacatttttcataagctatttttaacttaa 449888  T
Q  286 tttcataagtt 296  Q
    ||| |||||||    
T  449887 tttgataagtt 449877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 307
Target Start/End: Complemental strand, 750203 - 750161
Alignment:
Q  265 cataagttgttttcagcttattttcataagttctccaagatag 307  Q
    ||||||||| ||||||||||||| ||||||| |||||||||||    
T  750203 cataagttgctttcagcttatttccataagtactccaagatag 750161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 317
Target Start/End: Original strand, 3078651 - 3078701
Alignment:
Q  267 taagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    ||||||||||| ||||||||| || ||| ||||||||||||| ||||||||    
T  3078651 taagttgtttttagcttatttccagaagctctccaagatagcttataaaaa 3078701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 298
Target Start/End: Original strand, 14220822 - 14220864
Alignment:
Q  256 gacattgttcataagttgttttcagcttattttcataagttct 298  Q
    ||||||||| ||||| | |||||||||||||||||||||||||    
T  14220822 gacattgtttataagctcttttcagcttattttcataagttct 14220864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 307
Target Start/End: Original strand, 19333330 - 19333376
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctccaagatag 307  Q
    |||||||||| |||| |||||||||||||||||| ||||||| ||||    
T  19333330 tgttcataagctgttctcagcttattttcataagctctccaatatag 19333376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 318
Target Start/End: Original strand, 28039336 - 28039394
Alignment:
Q  260 ttgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaat 318  Q
    ||||||||||| |||||||||||||||| ||||| || ||||||| ||| ||| |||||    
T  28039336 ttgttcataagctgttttcagcttatttccataacttttccaagaaagcttatgaaaat 28039394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 212
Target Start/End: Original strand, 28810363 - 28810409
Alignment:
Q  166 taagggcctgttaggattggcttatttgagcttatctattgacataa 212  Q
    |||||||||||| |||||| ||||||||||||| ||||||| |||||    
T  28810363 taagggcctgtttggattgacttatttgagcttctctattggcataa 28810409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 307
Target Start/End: Original strand, 32364744 - 32364782
Alignment:
Q  269 agttgttttcagcttattttcataagttctccaagatag 307  Q
    |||||||||||||||||||||||||| |||| |||||||    
T  32364744 agttgttttcagcttattttcataagatctctaagatag 32364782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 306
Target Start/End: Complemental strand, 36043974 - 36043924
Alignment:
Q  256 gacattgttcataagttgttttcagcttattttcataagttctccaagata 306  Q
    ||||||||||||||| |||||| |||| | ||||||||| |||||||||||    
T  36043974 gacattgttcataagctgtttttagctcaatttcataagctctccaagata 36043924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 212
Target Start/End: Original strand, 40837356 - 40837394
Alignment:
Q  174 tgttaggattggcttatttgagcttatctattgacataa 212  Q
    |||| ||||||||||||||||||||||||| ||||||||    
T  40837356 tgtttggattggcttatttgagcttatctactgacataa 40837394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 252
Target Start/End: Complemental strand, 42419948 - 42419866
Alignment:
Q  170 ggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagctt 252  Q
    ||||| || |||||| |||||||||| ||||||  ||||||||||| | |||||||||| |  |||||||  |||||||||||    
T  42419948 ggcctttttggattgacttatttgagtttatcttctgacataagttttttgagactgtttgggagaacttacgaaaacagctt 42419866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #86
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 301
Target Start/End: Original strand, 42621386 - 42621420
Alignment:
Q  267 taagttgttttcagcttattttcataagttctcca 301  Q
    |||||||||||||||||||||||| ||||||||||    
T  42621386 taagttgttttcagcttattttcacaagttctcca 42621420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #87
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 322
Target Start/End: Complemental strand, 43173276 - 43173226
Alignment:
Q  272 tgttttcagcttattttcataagttctccaagatagcctataaaaataaaa 322  Q
    |||||| | ||||||| |||||| |||||||||||||||||||||| ||||    
T  43173276 tgttttaaacttatttccataagatctccaagatagcctataaaaacaaaa 43173226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 203
Target Start/End: Complemental strand, 2790397 - 2790360
Alignment:
Q  166 taagggcctgttaggattggcttatttgagcttatcta 203  Q
    |||||||||||| |||||||||||||||| ||||||||    
T  2790397 taagggcctgtttggattggcttatttgaacttatcta 2790360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 302
Target Start/End: Complemental strand, 12195077 - 12194976
Alignment:
Q  201 ctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcataagttctcc 300  Q
    |||||||||||||||  || | |||||| |  |||||| || ||||||||||   |||| | |||||||| | |||||| |||||||||| |||||||||    
T  12195077 ctattgacataagtttcgtcatactgtttgggagaactattaaaaacagctttatgacaattttcataagcttttttcaacttattttcacaagttctcc 12194978  T
Q  301 aa 302  Q
    ||    
T  12194977 aa 12194976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #90
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 317
Target Start/End: Complemental strand, 15978047 - 15977994
Alignment:
Q  264 tcataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||||| |||||||||||||||||||||||  ||||||| ||||| ||| ||||    
T  15978047 tcataaattgttttcagcttattttcataatctctccaaaatagcttatgaaaa 15977994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #91
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 290
Target Start/End: Original strand, 19608567 - 19608667
Alignment:
Q  189 atttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttatttt 288  Q
    ||||||| ||||||| ||||||| ||| | |||||||||| |  ||||||| | || ||||||| || ||||| |||||||| | |||| ||||||||||    
T  19608567 atttgagtttatctactgacataggttttatgagactgtttgcgagaacttataaacacagcttatg-acattcttcataagctattttgagcttatttt 19608665  T
Q  289 ca 290  Q
    ||    
T  19608666 ca 19608667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #92
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 308
Target Start/End: Original strand, 35329829 - 35329870
Alignment:
Q  267 taagttgttttcagcttattttcataagttctccaagatagc 308  Q
    |||||||||| |||||||||| |||||| |||||||||||||    
T  35329829 taagttgtttccagcttatttccataagctctccaagatagc 35329870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #93
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 317
Target Start/End: Original strand, 36236451 - 36236501
Alignment:
Q  265 cataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    ||||| ||||||||||||||||||||||||  ||||| |||||| ||||||||    
T  36236451 cataaattgttttcagcttattttcataag--ctccaggatagcatataaaaa 36236501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #94
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 317
Target Start/End: Original strand, 41293120 - 41293224
Alignment:
Q  212 agttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcataagttctccaagatagccta 311  Q
    |||| ||||||||| || |  ||||||| | |||||||||| || |||||   |||||| |||||||||||||| ||||||||| ||||| |||||| ||    
T  41293120 agttttgtgagactatttgggagaacttataaaaacagcttatg-acatttcgcataagctgttttcagcttatattcataagtactccaggatagctta 41293218  T
Q  312 taaaaa 317  Q
    | ||||    
T  41293219 tcaaaa 41293224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #95
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 294
Target Start/End: Complemental strand, 43570505 - 43570446
Alignment:
Q  233 agaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcataag 294  Q
    ||||||| |||||||||||| || |||||||||||||| | |||| ||||||||||||||||    
T  43570505 agaacttatgaaaacagcttatg-acattgttcataagctttttt-agcttattttcataag 43570446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #96
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 295
Target Start/End: Original strand, 44606078 - 44606149
Alignment:
Q  222 gactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcataagt 295  Q
    ||||||| | |||||||| |||||||| ||| || |||| || |||||||||||||||||| ||||||||||||    
T  44606078 gactgtttggaagaacttatgaaaacaacttatg-acat-gtccataagttgttttcagctgattttcataagt 44606149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #97
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 302
Target Start/End: Original strand, 1633510 - 1633538
Alignment:
Q  274 ttttcagcttattttcataagttctccaa 302  Q
    |||||||||||||||||||||||||||||    
T  1633510 ttttcagcttattttcataagttctccaa 1633538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #98
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 299
Target Start/End: Original strand, 9877950 - 9877982
Alignment:
Q  267 taagttgttttcagcttattttcataagttctc 299  Q
    ||||||||||||| |||||||||||||||||||    
T  9877950 taagttgttttcaacttattttcataagttctc 9877982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #99
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 308
Target Start/End: Complemental strand, 11488339 - 11488295
Alignment:
Q  264 tcataagttgttttcagcttattttcataagttctccaagatagc 308  Q
    |||||||||||||||||||||||| |||||  |||||| ||||||    
T  11488339 tcataagttgttttcagcttatttgcataatctctccaggatagc 11488295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #100
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 27237782 - 27237822
Alignment:
Q  171 gcctgttaggattggcttatttgagcttatctattgacata 211  Q
    ||||||| ||||||||||||||| ||||||||| |||||||    
T  27237782 gcctgttcggattggcttatttgtgcttatctactgacata 27237822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #101
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 28933988 - 28933936
Alignment:
Q  160 tcatattaagggcctgttaggattggcttatttgagcttatctattgacataa 212  Q
    ||||| ||||||||| || ||||||||||||| ||||||||||| || |||||    
T  28933988 tcataataagggcctctttggattggcttattagagcttatctagtgccataa 28933936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #102
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 30990357 - 30990397
Alignment:
Q  173 ctgttaggattggcttatttgagcttatctattgacataag 213  Q
    ||||| ||||||||||||||||||||||||| | |||||||    
T  30990357 ctgtttggattggcttatttgagcttatctactaacataag 30990397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #103
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 317
Target Start/End: Original strand, 34652045 - 34652097
Alignment:
Q  265 cataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||||| |||||||| ||||||| |||||| ||||||||||||| ||| ||||    
T  34652045 cataagctgttttcaacttatttccataagctctccaagatagcttatgaaaa 34652097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #104
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 317
Target Start/End: Original strand, 36415682 - 36415734
Alignment:
Q  265 cataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    ||||||||||||||| ||||||||| |||||||| || |||||| ||| ||||    
T  36415682 cataagttgttttcatcttattttcgtaagttctacatgatagcttatgaaaa 36415734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #105
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 302
Target Start/End: Original strand, 42868484 - 42868512
Alignment:
Q  274 ttttcagcttattttcataagttctccaa 302  Q
    |||||||||||||||||||||||||||||    
T  42868484 ttttcagcttattttcataagttctccaa 42868512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 68; Significance: 3e-30; HSPs: 68)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 166 - 317
Target Start/End: Original strand, 30251365 - 30251515
Alignment:
Q  166 taagggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttc 265  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||  ||||||||||| |  |||||||  ||||||||||| | | |||| |||    
T  30251365 taagggcctgtttggattggcttatttgagcttatctactgacataagtttcgtgagactgtttgggagaacttacgaaaacagcttattg-catttttc 30251463  T
Q  266 ataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    ||||| | ||| ||||||||||||||||||  ||||||||||| ||| ||||    
T  30251464 ataagctttttacagcttattttcataagtggtccaagatagcttatgaaaa 30251515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 168 - 308
Target Start/End: Original strand, 43717847 - 43717989
Alignment:
Q  168 agggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttct--ggacattgttc 265  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||| ||||||||| || |  ||||||| |||||||||  | |  |||||| | ||    
T  43717847 agggcctatttggattggcttatttgagcttatctattgacataagttttgtgagactatttgggagaacttatgaaaacagactatgaggacatcgctc 43717946  T
Q  266 ataagttgttttcagcttattttcataagttctccaagatagc 308  Q
    ||||| |||||| |||||| |||||||||||||||||||||||    
T  43717947 ataagctgtttttagcttactttcataagttctccaagatagc 43717989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 183 - 306
Target Start/End: Original strand, 1058005 - 1058126
Alignment:
Q  183 tggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagct 282  Q
    ||||||||||||||||||||| | ||||||||| |||||||||||| |  ||||||||||||||| |||| | |||||| ||||| |||| ||||| |||    
T  1058005 tggcttatttgagcttatctacttacataagttttgtgagactgtttgggagaacttttgaaaactgcttat-gacatttttcattagtt-ttttccgct 1058102  T
Q  283 tattttcataagttctccaagata 306  Q
    ||||||||||||||||||||||||    
T  1058103 tattttcataagttctccaagata 1058126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 185 - 308
Target Start/End: Original strand, 31716157 - 31716279
Alignment:
Q  185 gcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagctta 284  Q
    |||||||||||||||||||||| ||||  || | ||||||||||    |||||||||||||||||||| || ||||| |||||||| | |||||||||||    
T  31716157 gcttatttgagcttatctattggcatattttttttgagactgtttcggagaacttttgaaaacagcttatg-acattcttcataagcttttttcagctta 31716255  T
Q  285 ttttcataagttctccaagatagc 308  Q
    |||  |||| ||||||||||||||    
T  31716256 tttctataacttctccaagatagc 31716279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 181 - 292
Target Start/End: Original strand, 32840912 - 32841022
Alignment:
Q  181 attggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcag 280  Q
    |||| |||| ||||||||||||| | ||| ||||| || ||||||||| |  ||||||| |||||||| ||| || ||||||||||||||||||||||||    
T  32840912 attgacttacttgagcttatctactcacacaagttttgcgagactgtttgggagaacttatgaaaacaacttatg-acattgttcataagttgttttcag 32841010  T
Q  281 cttattttcata 292  Q
    ||||||||||||    
T  32841011 cttattttcata 32841022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 170 - 317
Target Start/End: Complemental strand, 38648506 - 38648360
Alignment:
Q  170 ggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataa 269  Q
    ||||||||||||||||||||||| || ||||||| ||||||||||| |||||||||||| |  ||| ||| |||||||||||  || ||| |  ||||||    
T  38648506 ggcctgttaggattggcttatttaagattatctactgacataagttttgtgagactgtttgggagaccttatgaaaacagctcatg-acagttctcataa 38648408  T
Q  270 gttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    | | |||| ||| || ||||||||||||| ||||||||| ||| ||||    
T  38648407 gcttttttaagcgtaatttcataagttctacaagatagcttatgaaaa 38648360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 180 - 306
Target Start/End: Original strand, 3536870 - 3536995
Alignment:
Q  180 gattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttca 279  Q
    ||||| |||||||||||||||||| || |||||| | |||| |||| || || |||| ||    ||||||||| || ||||||||||||| |||||||||    
T  3536870 gattgtcttatttgagcttatctactggcataagctttgtgtgactattcgagagaatttacagaaacagcttatg-acattgttcataaattgttttca 3536968  T
Q  280 gcttattttcataagttctccaagata 306  Q
    |||||||| ||||||||||||||||||    
T  3536969 gcttatttccataagttctccaagata 3536995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 169 - 302
Target Start/End: Original strand, 35534527 - 35534659
Alignment:
Q  169 gggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcata 268  Q
    |||||||||  || || |||||||||||||||||| | ||||||||| |||||||||||| || ||||||| |||||||||||| | |||| | || | |    
T  35534527 gggcctgtttagaatgacttatttgagcttatctactaacataagttttgtgagactgtttgagagaacttgtgaaaacagcttat-gacaattttaaca 35534625  T
Q  269 agttgttttcagcttattttcataagttctccaa 302  Q
    || | ||||| ||||| |||||||||||||||||    
T  35534626 agcttttttcggcttactttcataagttctccaa 35534659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 186 - 317
Target Start/End: Complemental strand, 27028970 - 27028840
Alignment:
Q  186 cttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttat 285  Q
    |||||||||| ||||| | || ||||||||  |||||| |||| |  |||| || ||||||||||||  ||||||| |||||||| | ||||||||||||    
T  27028970 cttatttgagtttatccactggcataagtttagtgagattgtttgggagaaattctgaaaacagctta-ggacatttttcataagctattttcagcttat 27028872  T
Q  286 tttcataagttctccaagatagcctataaaaa 317  Q
    ||||||||| ||||||||||||| ||| ||||    
T  27028871 tttcataagctctccaagatagcttatgaaaa 27028840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 168 - 307
Target Start/End: Original strand, 35643901 - 35644039
Alignment:
Q  168 agggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcat 267  Q
    |||||||||| ||||||||||||||| ||||||||| || ||||| || |||||||||||| |  | ||||| |||||| || || | |||| | |||||    
T  35643901 agggcctgttgggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttat-gacaattttcat 35643999  T
Q  268 aagttgttttcagcttattttcataagttctccaagatag 307  Q
    ||| | |||||| |||||||||||||| ||||||| ||||    
T  35644000 aagcttttttcaacttattttcataagctctccaatatag 35644039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 233 - 307
Target Start/End: Original strand, 9956792 - 9956865
Alignment:
Q  233 agaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcataagttctccaagatag 307  Q
    ||||||| |||||| || || ||| |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  9956792 agaacttatgaaaatagtttatgg-cattgttcataagtagttttcagcttattttcataagttctccaagatag 9956865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 186 - 308
Target Start/End: Original strand, 35749501 - 35749622
Alignment:
Q  186 cttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttat 285  Q
    |||| ||||||||||||||||||||||||| || ||| ||||| || ||||||| |||||||||||| | | |||| |||||||  | |||||| | |||    
T  35749501 cttaattgagcttatctattgacataagttttgcgaggctgtttgagagaacttatgaaaacagcttgtag-catttttcataaacttttttcaacatat 35749599  T
Q  286 tttcataagttctccaagatagc 308  Q
    |||||||||||||  ||||||||    
T  35749600 tttcataagttctttaagatagc 35749622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 196 - 317
Target Start/End: Complemental strand, 1930164 - 1930044
Alignment:
Q  196 cttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcataagt 295  Q
    |||||||| ||||||||||| ||||| | | || |  ||||||| ||||||||| || || |||||||||||||| ||||||||||||||||||| |||     
T  1930164 cttatctactgacataagttttgtgacattatttgggagaacttgtgaaaacagtttatg-acattgttcataagctgttttcagcttattttcacaagg 1930066  T
Q  296 tctccaagatagcctataaaaa 317  Q
    || |||||||||| ||| ||||    
T  1930065 tcaccaagatagcttatgaaaa 1930044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 296
Target Start/End: Original strand, 10758168 - 10758297
Alignment:
Q  166 taagggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttc 265  Q
    ||||||| |||| | |||| ||||||||| |||||||  | ||||||||| |||||||||||| || |||| || |||||||||||| | |||| | |||    
T  10758168 taagggcatgtttgaattgacttatttgaacttatctgctaacataagttttgtgagactgtttgatagaatttatgaaaacagcttat-gacaattttc 10758266  T
Q  266 ataagttgttttcagcttattttcataagtt 296  Q
    | ||| | |||||||||| ||||||||||||    
T  10758267 aaaagcttttttcagcttgttttcataagtt 10758297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 261 - 319
Target Start/End: Original strand, 42215087 - 42215145
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaata 319  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||| ||| ||||||    
T  42215087 tgttcataagttgttttcagcttatttacataagctctccaagatagcttatgaaaata 42215145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 222 - 307
Target Start/End: Complemental strand, 10120859 - 10120775
Alignment:
Q  222 gactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcataagttctccaagatag 307  Q
    ||||||| || ||||||| |||||||||||| || |||||  ||||| | ||||||||||||||||||||||||||||||| ||||    
T  10120859 gactgtttgagagaacttatgaaaacagcttatg-acatttatcatatgctgttttcagcttattttcataagttctccaatatag 10120775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 166 - 317
Target Start/End: Complemental strand, 43504910 - 43504760
Alignment:
Q  166 taagggcctgttaggattggcttatttgagcttatctattgacataag---ttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattg 262  Q
    ||||||||| ||||||||||||||||| |||||||||| || | ||||   ||||||  |||||||    ||||||  |||||||| |||   ||| |||    
T  43504910 taagggcctattaggattggcttatttaagcttatctactggcttaagcacttgtgt--gactgtttcggagaactgatgaaaacaactt-acgac-ttg 43504815  T
Q  263 ttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    || ||||| |||||||||||||||| |||||||||||||||||||| ||||||||    
T  43504814 tttataagctgttttcagcttatttccataagttctccaagatagcttataaaaa 43504760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 180 - 316
Target Start/End: Complemental strand, 18133801 - 18133666
Alignment:
Q  180 gattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttca 279  Q
    ||||||||||||| |||||||||| |   ||||||| |||||||||||| |  ||| ||| ||||| |||||| |  ||| | |||| ||| | ||||||    
T  18133801 gattggcttatttaagcttatctactagtataagttttgtgagactgtttgggagagcttgtgaaatcagcttata-acaattttcacaagcttttttca 18133703  T
Q  280 gcttattttcataagttctccaagatagcctataaaa 316  Q
    ||||||||||||||||||||||| ||||  |||||||    
T  18133702 gcttattttcataagttctccaatatagtttataaaa 18133666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 20672815 - 20672759
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||||||||| ||||||||||||||||||||||| |||||| |||||| ||||||||    
T  20672815 tgttcataagctgttttcagcttattttcataagctctccaggatagcttataaaaa 20672759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 164 - 228
Target Start/End: Complemental strand, 38602488 - 38602424
Alignment:
Q  164 attaagggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgtt 228  Q
    |||| ||||||||| |||||| |||||||||||||||||| ||||||||||| |||||| |||||    
T  38602488 attatgggcctgtttggattgacttatttgagcttatctactgacataagttttgtgaggctgtt 38602424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 317
Target Start/End: Complemental strand, 12976355 - 12976222
Alignment:
Q  182 ttggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagc 281  Q
    |||||||||||||||||||||| |  |||||| | ||||||||||||    ||||||| ||| ||||||||||  ||| | |||| ||| | ||||||||    
T  12976355 ttggcttatttgagcttatctactagcataaggtttgtgagactgtttagtagaacttatgagaacagcttct-aacaattttcaaaagcttttttcagc 12976257  T
Q  282 ttattttcataagttctccaagatagcctataaaaa 317  Q
    ||| |||||||||||||| || ||||| ||||||||    
T  12976256 tta-tttcataagttctctaatatagcttataaaaa 12976222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 257 - 307
Target Start/End: Complemental strand, 1113127 - 1113077
Alignment:
Q  257 acattgttcataagttgttttcagcttattttcataagttctccaagatag 307  Q
    |||||||||||||| |||||| |||| ||||||||||||||||||||||||    
T  1113127 acattgttcataagctgtttttagctaattttcataagttctccaagatag 1113077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 187 - 317
Target Start/End: Complemental strand, 26771403 - 26771274
Alignment:
Q  187 ttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttatt 286  Q
    |||| ||||||||||||  | |||||||| |||||||||||| |  ||||||| |||||||||||| | |||| | |||| |||   |||||| ||||||    
T  26771403 ttatctgagcttatctacgggcataagttttgtgagactgtttgggagaacttatgaaaacagcttat-gacaattttcaaaagcctttttcaacttatt 26771305  T
Q  287 ttcataagttctccaagatagcctataaaaa 317  Q
    ||||||||||||| || ||| | ||||||||    
T  26771304 ttcataagttctctaatatatcttataaaaa 26771274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 261 - 299
Target Start/End: Complemental strand, 30389164 - 30389126
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctc 299  Q
    |||||||||||||||||||||||||||||||||||||||    
T  30389164 tgttcataagttgttttcagcttattttcataagttctc 30389126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 171 - 297
Target Start/End: Complemental strand, 33808456 - 33808332
Alignment:
Q  171 gcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataag 270  Q
    ||||||| |||||| |||||| |||||||| || || | |||||| | || || |||| |  ||||||| |||||| ||||| || | ||||||||||||    
T  33808456 gcctgtttggattgacttattcgagcttatgtagtggc-taagttttttgtgattgtttgggagaacttatgaaaatagcttatg-atattgttcataag 33808359  T
Q  271 ttgttttcagcttattttcataagttc 297  Q
    ||||||| |||||||||||||||||||    
T  33808358 ttgtttttagcttattttcataagttc 33808332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 181 - 292
Target Start/End: Complemental strand, 11376847 - 11376737
Alignment:
Q  181 attggcttatttgagcttatctattgacataagtt-gtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttca 279  Q
    ||||||||||||||||||||||| ||| |||||||  ||||||||| || |  ||||||| |||||| ||||| | |||| |||| |||  |||||||||    
T  11376847 attggcttatttgagcttatctactgatataagttcttgtgagactatttgggagaacttatgaaaatagcttgt-gaca-tgttaatatcttgttttca 11376750  T
Q  280 gcttattttcata 292  Q
    |||||||||||||    
T  11376749 gcttattttcata 11376737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 217 - 304
Target Start/End: Complemental strand, 30918219 - 30918135
Alignment:
Q  217 tgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcataagttctccaaga 304  Q
    |||||||||||| || ||| ||| |||||||| ||| || |||||  |||||||||||||||||||||||| |||||| |||||||||    
T  30918219 tgtgagactgtttgagagagcttatgaaaacaacttgtg-acatt--tcataagttgttttcagcttatttccataagctctccaaga 30918135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 171 - 307
Target Start/End: Original strand, 43045641 - 43045776
Alignment:
Q  171 gcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataag 270  Q
    ||||||| |||||||||||||| |||||||||| |  |||||| | ||||||||||||    ||| ||| ||||||||||||    ||| | || |||||    
T  43045641 gcctgtttggattggcttatttaagcttatctactagcataagatttgtgagactgttttggagatcttatgaaaacagctt-acaacaattttaataag 43045739  T
Q  271 ttgttttcagcttattttcataagttctccaagatag 307  Q
     | |||||| |||||||||||||||||||||| ||||    
T  43045740 cttttttcaacttattttcataagttctccaatatag 43045776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 249
Target Start/End: Original strand, 12496983 - 12497066
Alignment:
Q  166 taagggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacag 249  Q
    ||||||||| || ||||||  ||||||||||||||||  || |||||||| |||||||||||| || ||||||| | |||||||    
T  12496983 taagggcctatttggattgatttatttgagcttatctcctggcataagttttgtgagactgtttgagagaacttctaaaaacag 12497066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 260 - 319
Target Start/End: Original strand, 33714240 - 33714299
Alignment:
Q  260 ttgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaata 319  Q
    ||||||||||| ||||||||||||||||| ||||| ||||| ||||||| ||| ||||||    
T  33714240 ttgttcataagctgttttcagcttatttttataagctctcccagatagcttatgaaaata 33714299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 36963272 - 36963327
Alignment:
Q  173 ctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgtt 228  Q
    ||||| ||||||||||||||||||| ||||| || |||||||| ||||||||||||    
T  36963272 ctgtttggattggcttatttgagctaatctactggcataagttttgtgagactgtt 36963327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 260 - 319
Target Start/End: Original strand, 42215310 - 42215369
Alignment:
Q  260 ttgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaata 319  Q
    ||||||||||| |||||||||||||||| |||||| |||||| |||||| ||| ||||||    
T  42215310 ttgttcataagctgttttcagcttatttacataagctctccaggatagcatatgaaaata 42215369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 262 - 308
Target Start/End: Complemental strand, 21653145 - 21653099
Alignment:
Q  262 gttcataagttgttttcagcttattttcataagttctccaagatagc 308  Q
    ||||||||| | ||||||||||||||||||||| |||||||||||||    
T  21653145 gttcataagctattttcagcttattttcataagctctccaagatagc 21653099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 228
Target Start/End: Original strand, 29818855 - 29818917
Alignment:
Q  166 taagggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgtt 228  Q
    ||||||| |||| |||||||| |||||||||||||||| |  |||||||| ||||||||||||    
T  29818855 taagggcatgtttggattggcatatttgagcttatctactatcataagttttgtgagactgtt 29818917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 261 - 302
Target Start/End: Complemental strand, 4281611 - 4281570
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctccaa 302  Q
    ||||||||||||||||||| ||||||||||||| ||||||||    
T  4281611 tgttcataagttgttttcatcttattttcataaattctccaa 4281570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 318
Target Start/End: Original strand, 25869275 - 25869328
Alignment:
Q  265 cataagttgttttcagcttattttcataagttctccaagatagcctataaaaat 318  Q
    ||||||||||||||||||||||| |||||  |||||| |||||||||| |||||    
T  25869275 cataagttgttttcagcttatttccataaactctccatgatagcctatgaaaat 25869328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 306
Target Start/End: Complemental strand, 30259174 - 30259134
Alignment:
Q  266 ataagttgttttcagcttattttcataagttctccaagata 306  Q
    ||||||||||||||| |||||| ||||||||||||||||||    
T  30259174 ataagttgttttcagtttatttccataagttctccaagata 30259134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 261 - 296
Target Start/End: Original strand, 2595002 - 2595037
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagtt 296  Q
    |||||||||||||||||||||||||| |||||||||    
T  2595002 tgttcataagttgttttcagcttattctcataagtt 2595037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 174 - 225
Target Start/End: Original strand, 9130238 - 9130289
Alignment:
Q  174 tgttaggattggcttatttgagcttatctattgacataagttgtgtgagact 225  Q
    |||| ||||| ||||||||||||||||||| || |||||||| |||||||||    
T  9130238 tgtttggattagcttatttgagcttatctactggcataagttttgtgagact 9130289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 264 - 319
Target Start/End: Complemental strand, 11494208 - 11494153
Alignment:
Q  264 tcataagttgttttcagcttattttcataagttctccaagatagcctataaaaata 319  Q
    ||||||| || |||||||||||||||||||| ||| ||||||||| ||| ||||||    
T  11494208 tcataagctgctttcagcttattttcataagctcttcaagatagcttatgaaaata 11494153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 195 - 317
Target Start/End: Complemental strand, 28763498 - 28763377
Alignment:
Q  195 gcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataag-ttgttttcagcttattttcataa 293  Q
    ||||||||| | ||||||||| |||||||||||| |  ||||||| |||||||||||| |  ||| | |||||||| || |||||| |||| ||||||||    
T  28763498 gcttatctagtaacataagttttgtgagactgtttgggagaacttatgaaaacagcttat-aacaattttcataagctttttttcaactta-tttcataa 28763401  T
Q  294 gttctccaagatagcctataaaaa 317  Q
    ||||  ||| ||||| ||||||||    
T  28763400 gttcagcaatatagcttataaaaa 28763377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 217 - 308
Target Start/End: Original strand, 29168019 - 29168109
Alignment:
Q  217 tgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcataagttctccaagatagc 308  Q
    |||||||||||| |  ||||||| | ||||||| || || ||||| ||||||| |  || ||||||||||| ||||||||||||||||||||    
T  29168019 tgtgagactgtttgggagaacttataaaaacagattatg-acatttttcataaatgtttctcagcttatttccataagttctccaagatagc 29168109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 308
Target Start/End: Complemental strand, 2482927 - 2482881
Alignment:
Q  262 gttcataagttgttttcagcttattttcataagttctccaagatagc 308  Q
    ||||||||| ||||||||||||||||  ||||||| |||||||||||    
T  2482927 gttcataagctgttttcagcttatttctataagttatccaagatagc 2482881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 213
Target Start/End: Complemental strand, 4560648 - 4560614
Alignment:
Q  179 ggattggcttatttgagcttatctattgacataag 213  Q
    |||||| ||||||||||||||||||||||||||||    
T  4560648 ggattgacttatttgagcttatctattgacataag 4560614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 302
Target Start/End: Complemental strand, 27049436 - 27049390
Alignment:
Q  256 gacattgttcataagttgttttcagcttattttcataagttctccaa 302  Q
    ||||||||||||| | |||||||| ||||||||||||| ||||||||    
T  27049436 gacattgttcatatgctgttttcatcttattttcataatttctccaa 27049390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 294
Target Start/End: Original strand, 31751557 - 31751595
Alignment:
Q  256 gacattgttcataagttgttttcagcttattttcataag 294  Q
    ||||||||||||||| | |||||||||||||||||||||    
T  31751557 gacattgttcataagctattttcagcttattttcataag 31751595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 306
Target Start/End: Original strand, 36338278 - 36338312
Alignment:
Q  272 tgttttcagcttattttcataagttctccaagata 306  Q
    |||||||||||||||||||||||||||| ||||||    
T  36338278 tgttttcagcttattttcataagttctcaaagata 36338312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 317
Target Start/End: Original strand, 44236834 - 44236884
Alignment:
Q  267 taagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||||| ||||||||||||||||||||| ||||||| ||||| ||| ||||    
T  44236834 taagttattttcagcttattttcataagctctccaatatagcttatgaaaa 44236884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 44792807 - 44792753
Alignment:
Q  174 tgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgtt 228  Q
    |||| ||||||||||||||||||||||||| ||  |||| || ||||||||||||    
T  44792807 tgtttggattggcttatttgagcttatctactgggataaattatgtgagactgtt 44792753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 306
Target Start/End: Original strand, 3537046 - 3537079
Alignment:
Q  273 gttttcagcttattttcataagttctccaagata 306  Q
    ||||||||||||||| ||||||||||||||||||    
T  3537046 gttttcagcttatttccataagttctccaagata 3537079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 215
Target Start/End: Original strand, 13958001 - 13958046
Alignment:
Q  170 ggcctgttaggattggcttatttgagcttatctattgacataagtt 215  Q
    |||||||| ||||||||||| ||||| |||||||||| ||||||||    
T  13958001 ggcctgtttggattggcttacttgagtttatctattggcataagtt 13958046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 225
Target Start/End: Complemental strand, 15180692 - 15180639
Alignment:
Q  172 cctgttaggattggcttatttgagcttatctattgacataagttgtgtgagact 225  Q
    |||||| ||||||||||||||||| ||||||| || |||||||| | |||||||    
T  15180692 cctgtttggattggcttatttgagtttatctactgccataagttttatgagact 15180639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 298
Target Start/End: Original strand, 26583379 - 26583416
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttct 298  Q
    |||| |||||||| ||||||||||||||||||||||||    
T  26583379 tgtttataagttgatttcagcttattttcataagttct 26583416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 40859707 - 40859756
Alignment:
Q  179 ggattggcttatttgagcttatctattgacataagttgtgtgagactgtt 228  Q
    ||||||||||||||||||||||||  | ||||||||| |||||| |||||    
T  40859707 ggattggcttatttgagcttatctgctaacataagttttgtgaggctgtt 40859756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 208 - 288
Target Start/End: Original strand, 779015 - 779093
Alignment:
Q  208 cataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttatttt 288  Q
    |||||||| || |||| |||| ||||||||||  ||||||| ||| || |||| |||||||||||||||||| ||||||||    
T  779015 cataagttatgcgagattgtttgaaagaacttacgaaaacaacttatg-acat-gttcataagttgttttcatcttatttt 779093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 302
Target Start/End: Complemental strand, 8499348 - 8499312
Alignment:
Q  266 ataagttgttttcagcttattttcataagttctccaa 302  Q
    ||||||||||||||||||||||||| || ||||||||    
T  8499348 ataagttgttttcagcttattttcacaatttctccaa 8499312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 308
Target Start/End: Complemental strand, 10114543 - 10114507
Alignment:
Q  272 tgttttcagcttattttcataagttctccaagatagc 308  Q
    ||||||||||||||||||||| ||||||||| |||||    
T  10114543 tgttttcagcttattttcatatgttctccaatatagc 10114507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 317
Target Start/End: Original strand, 11569466 - 11569518
Alignment:
Q  265 cataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||||||||||||||||||||||||| ||  |||||| |||||| ||| ||||    
T  11569466 cataagttgttttcagcttattttcaaaatctctccatgatagcttatgaaaa 11569518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 306
Target Start/End: Complemental strand, 12559040 - 12558996
Alignment:
Q  262 gttcataagttgttttcagcttattttcataagttctccaagata 306  Q
    |||||||||||||||| | |||||||||||||| | |||||||||    
T  12559040 gttcataagttgtttttaacttattttcataagctatccaagata 12558996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 308
Target Start/End: Complemental strand, 18930764 - 18930720
Alignment:
Q  264 tcataagttgttttcagcttattttcataagttctccaagatagc 308  Q
    ||||||| |||||||| |||||| |||||||||||| ||||||||    
T  18930764 tcataagctgttttcatcttattctcataagttctcgaagatagc 18930720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 22505687 - 22505655
Alignment:
Q  180 gattggcttatttgagcttatctattgacataa 212  Q
    ||||| |||||||||||||||||||||||||||    
T  22505687 gattgacttatttgagcttatctattgacataa 22505655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 294
Target Start/End: Original strand, 26284805 - 26284833
Alignment:
Q  266 ataagttgttttcagcttattttcataag 294  Q
    |||||||||||||||||||||||||||||    
T  26284805 ataagttgttttcagcttattttcataag 26284833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 317
Target Start/End: Original strand, 28769348 - 28769400
Alignment:
Q  265 cataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    ||||||||||||||||||||||| |||||  ||||||| ||||| ||| ||||    
T  28769348 cataagttgttttcagcttatttccataaactctccaaaatagcttatgaaaa 28769400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 313
Target Start/End: Original strand, 39866743 - 39866791
Alignment:
Q  265 cataagttgttttcagcttattttcataagttctccaagatagcctata 313  Q
    |||||| ||||||||| ||||||||||||| ||| ||||||||| ||||    
T  39866743 cataagctgttttcagtttattttcataagctcttcaagatagcttata 39866791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 317
Target Start/End: Original strand, 39881769 - 39881813
Alignment:
Q  273 gttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    ||||||||||||||| |||||| |||||| |||||| ||||||||    
T  39881769 gttttcagcttatttccataagctctccatgatagcttataaaaa 39881813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 41475027 - 41475071
Alignment:
Q  170 ggcctgttaggattggcttatttgagcttatctattgacataagt 214  Q
    |||||||| |||||| |||||||||||||||  ||||||||||||    
T  41475027 ggcctgtttggattgacttatttgagcttattgattgacataagt 41475071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 317
Target Start/End: Original strand, 41620300 - 41620352
Alignment:
Q  265 cataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||||||||||||| ||||||||||| ||| ||  ||||||||| ||||||||    
T  41620300 cataagttgttttccgcttattttcaaaagctcgacaagatagcttataaaaa 41620352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 301
Target Start/End: Complemental strand, 44401626 - 44401586
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctcca 301  Q
    ||||||||  ||||||||||||||||| |||||||||||||    
T  44401626 tgttcatacattgttttcagcttatttccataagttctcca 44401586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 1e-29; HSPs: 101)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 179 - 317
Target Start/End: Complemental strand, 21367813 - 21367676
Alignment:
Q  179 ggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttc 278  Q
    ||||||||||||||||| |||||||    |||||||| |||| ||||||| |  ||||||| |||||||||||| || |||||||||| ||| |||||||    
T  21367813 ggattggcttatttgagattatctaccagcataagttttgtgggactgtttgggagaacttatgaaaacagcttatg-acattgttcacaagctgttttc 21367715  T
Q  279 agcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||||||||||||||||||||||||||||| ||| ||||    
T  21367714 agcttattttcataagttctccaagatagcttatgaaaa 21367676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 159 - 317
Target Start/End: Original strand, 24085241 - 24085399
Alignment:
Q  159 ttcatattaagggcctg-ttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctgga 257  Q
    |||| ||||||||| || || |||||||||||||||||||||||||  | |||||||| |||||||||| |    ||||||| |||||||||||| |||     
T  24085241 ttcacattaagggcttggtttggattggcttatttgagcttatctaccggcataagttttgtgagactggtttggagaacttatgaaaacagcttatggt 24085340  T
Q  258 cattgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
     | |||||||| | ||||||||||||||||||| ||||||||||||||||| || |||||    
T  24085341 -actgttcatacgctgttttcagcttattttcacaagttctccaagatagcttacaaaaa 24085399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 179 - 317
Target Start/End: Original strand, 18405755 - 18405892
Alignment:
Q  179 ggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttc 278  Q
    ||||||| ||||||||||||||||| ||||||||||| |||||||||||| | |||||||| ||||||||| |||  |||| | |||||||  | |||      
T  18405755 ggattggtttatttgagcttatctactgacataagttttgtgagactgtttgcaagaacttatgaaaacag-ttcacgacacttttcataatctttttca 18405853  T
Q  279 agcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||||| ||||||||||||||||||||||| ||| ||||    
T  18405854 agcttaatttcataagttctccaagatagcttatgaaaa 18405892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 181 - 291
Target Start/End: Complemental strand, 26878344 - 26878235
Alignment:
Q  181 attggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcag 280  Q
    ||||||||||| ||||||||||| |||||||||||| |||| |||||| || ||||||| |||||| ||||| | ||||||||||||||  |||||||||    
T  26878344 attggcttattcgagcttatctactgacataagttgcgtgaaactgtttgagagaacttgtgaaaatagcttat-gacattgttcataaactgttttcag 26878246  T
Q  281 cttattttcat 291  Q
    |||||||||||    
T  26878245 cttattttcat 26878235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 181 - 307
Target Start/End: Complemental strand, 46031134 - 46031009
Alignment:
Q  181 attggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcag 280  Q
    ||||||||||||||| ||||||||||  ||||||| | ||||||||||  | |||||||  ||||||||| | || ||||| |||||||| |||||||||    
T  46031134 attggcttatttgagtttatctattgttataagttttatgagactgtttcagagaacttacgaaaacagcctatg-acattattcataagctgttttcag 46031036  T
Q  281 cttattttcataagttctccaagatag 307  Q
    |||||||| ||||||||||||||||||    
T  46031035 cttattttaataagttctccaagatag 46031009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 168 - 317
Target Start/End: Complemental strand, 39980886 - 39980738
Alignment:
Q  168 agggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcat 267  Q
    |||| ||||| |||||||||| |||||||||||||| |  |||||||| ||||||||||||  | ||||||| |||||||||||| | |||    |||||    
T  39980886 agggtctgtttggattggcttgtttgagcttatctactagcataagttttgtgagactgtttaagagaacttatgaaaacagcttat-gactggtttcat 39980788  T
Q  268 aagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    ||| | |||||| |||||||||||||||||||||| ||||| ||||||||    
T  39980787 aagcttttttcaacttattttcataagttctccaatatagcttataaaaa 39980738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 186 - 308
Target Start/End: Original strand, 34610737 - 34610858
Alignment:
Q  186 cttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttat 285  Q
    |||||||||||||||||| ||||||||||| |||   ||| || |  ||||||| ||||||| |||| || ||||||||||||||| |||||||||| ||    
T  34610737 cttatttgagcttatctactgacataagttttgtacaactatttgggagaacttatgaaaactgcttatg-acattgttcataagtggttttcagctgat 34610835  T
Q  286 tttcataagttctccaagatagc 308  Q
    |||||||||||| ||||||||||    
T  34610836 tttcataagttcgccaagatagc 34610858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 179 - 293
Target Start/End: Original strand, 31365112 - 31365225
Alignment:
Q  179 ggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttc 278  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||| |  ||||||| ||||| |||||| | |||| | |||||||| | |||||    
T  31365112 ggattggcttatttgagcttatctattggcataagttttgtgagactgtttgggagaacttatgaaagcagcttat-gacaattttcataagcttttttc 31365210  T
Q  279 agcttattttcataa 293  Q
    | || ||||||||||    
T  31365211 aactcattttcataa 31365225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 176 - 317
Target Start/End: Original strand, 39602132 - 39602271
Alignment:
Q  176 ttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgtt 275  Q
    |||| ||||||||||||||||||| ||| || ||| |||| |||||| || || | |||| ||| |||| ||||||| || |||| |||||||| |||||    
T  39602132 ttagaattggcttatttgagcttagctactggcatcagttttgtgaggctatttggaagagcttatgaagacagcttatg-acat-gttcataaattgtt 39602229  T
Q  276 ttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||| ||||||||||||||||||| |||||||| ||| ||||    
T  39602230 ttcaacttattttcataagttctcaaagatagcttatgaaaa 39602271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 317
Target Start/End: Original strand, 402457 - 402603
Alignment:
Q  170 ggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataa 269  Q
    |||||||| || ||| | |||||||| ||||| | | ||||||||| ||  |||||||| |  ||||| | |||||||||||| || |||||||||||||    
T  402457 ggcctgtttgggttgacctatttgagtttatcaactaacataagttttgcaagactgtttgggagaacgtatgaaaacagcttatg-acattgttcataa 402555  T
Q  270 gttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    | ||||||||||||| ||||| ||||||| ||||||||  ||||||||    
T  402556 gctgttttcagcttaatttcacaagttcttcaagatagattataaaaa 402603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 309
Target Start/End: Original strand, 47249398 - 47249539
Alignment:
Q  166 taagggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttc 265  Q
    ||||||| |||| | |||||||||||||||||||| |  |||||||| ||   ||| | |||| |||||||||| |||||||  ||| || |||| ||||    
T  47249398 taagggcatgtttgtattggcttatttgagcttatatgctgacataaattaattgaaattgtttgaaagaacttatgaaaaccacttatg-acat-gttc 47249495  T
Q  266 ataagttgttttcagcttattttcataagttctccaagatagcc 309  Q
    ||||||||||||  |||||||||||||||| |||||||||||||    
T  47249496 ataagttgtttttggcttattttcataagtcctccaagatagcc 47249539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 166 - 308
Target Start/End: Complemental strand, 38902224 - 38902084
Alignment:
Q  166 taagggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttc 265  Q
    ||||| |||||| | |||| || ||||||||||||||| || |||||||| ||  | |||||| | ||||| || |||||||||| | || |||||||||    
T  38902224 taaggacctgtttgaattgcctcatttgagcttatctactggcataagttttgcaa-actgtttggaagaatttatgaaaacagcatatg-acattgttc 38902127  T
Q  266 ataagttgttttcagcttattttcataagttctccaagatagc 308  Q
    ||| |||||||||| ||||||||||| |||||| |||||||||    
T  38902126 atacgttgttttcaacttattttcatgagttcttcaagatagc 38902084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 171 - 308
Target Start/End: Original strand, 20170630 - 20170760
Alignment:
Q  171 gcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttt-tgaaaacagcttctggacattgttcataa 269  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||  ||||||||||| |  |||||||| ||||||         ||||||||| | ||    
T  20170630 gcctgtttggattggcttatttgagcttatctagtgacataagtttagtgagactgtttgttagaactttatgaaaa--------tgacattgtttaaaa 20170721  T
Q  270 gttgttttcagcttattttcataagttctccaagatagc 308  Q
    |||||||| ||||||||| |||||| ||| |||||||||    
T  20170722 gttgtttttagcttatttgcataagctctacaagatagc 20170760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 190 - 306
Target Start/End: Original strand, 3845498 - 3845612
Alignment:
Q  190 tttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttc 289  Q
    |||||||||||||| || |||||||| |||||||||||| || ||||| | |||| |||| || || ||||| || ||||  | ||||||||||||||||    
T  3845498 tttgagcttatctactggcataagttttgtgagactgtttgatagaacatctgaagacagattatg-acattttt-ataatcttttttcagcttattttc 3845595  T
Q  290 ataagttctccaagata 306  Q
    |||||||||||||||||    
T  3845596 ataagttctccaagata 3845612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 189 - 317
Target Start/End: Complemental strand, 30444029 - 30443902
Alignment:
Q  189 atttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttatttt 288  Q
    ||||||||||||||| || ||||| ||  ||||||||||| |  ||| ||| |||||||||||| || ||| | |||| ||| | |||||||||||||||    
T  30444029 atttgagcttatctactggcataaatttggtgagactgtttggtagagcttatgaaaacagcttatg-acaattttcacaagcttttttcagcttatttt 30443931  T
Q  289 cataagttctccaagatagcctataaaaa 317  Q
    |||||||||||||| ||||  ||||||||    
T  30443930 cataagttctccaatatagtttataaaaa 30443902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 317
Target Start/End: Original strand, 46886606 - 46886753
Alignment:
Q  169 gggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcata 268  Q
    ||||||| | ||||||| ||||||||||||||||  || ||||| || || ||||||||| |   || ||  |||||||||||| ||| |||||||| ||    
T  46886606 gggcctgcttggattggtttatttgagcttatctgctggcataaattttgagagactgtttgggtgagctgatgaaaacagcttatgg-cattgttcgta 46886704  T
Q  269 agttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||| | ||||| ||||||||| ||||||||||||||||| ||| ||||    
T  46886705 agttatgttcaggttattttcaaaagttctccaagatagcttatgaaaa 46886753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 174 - 317
Target Start/End: Complemental strand, 20880627 - 20880485
Alignment:
Q  174 tgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttg 273  Q
    |||| ||||||||||||||||||||||||| |  ||||||||   | ||||| || |  ||||| | |||||||||||| || ||| | |||||||| |     
T  20880627 tgtttggattggcttatttgagcttatctacttgcataagtttccttagactatttgggagaacctatgaaaacagcttatg-acaattttcataagctt 20880529  T
Q  274 ttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||| |||||||||||||||||||||||| ||||| | ||||||    
T  20880528 ttttgagcttattttcataagttctccaatatagcttttaaaaa 20880485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 261 - 308
Target Start/End: Original strand, 33883755 - 33883802
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctccaagatagc 308  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  33883755 tgttcataagttgttttcagcttattttcataagttctctaagatagc 33883802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 198 - 308
Target Start/End: Original strand, 53789406 - 53789513
Alignment:
Q  198 tatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcataagttc 297  Q
    |||||| ||||||||||| ||||||||| | |||  ||||||||| ||||||||| || ||| | |||||||| | ||||||||||| ||||||||||||    
T  53789406 tatctactgacataagttttgtgagactttgaga--gaacttttggaaacagcttatg-acacttttcataagcttttttcagcttaatttcataagttc 53789502  T
Q  298 tccaagatagc 308  Q
    |||| ||||||    
T  53789503 tccatgatagc 53789513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 317
Target Start/End: Complemental strand, 2719535 - 2719477
Alignment:
Q  259 attgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||||| ||| ||||    
T  2719535 attgtccataagttgttctcagcttattttcataagttctccaagatagcttatgaaaa 2719477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 232 - 321
Target Start/End: Complemental strand, 45541663 - 45541576
Alignment:
Q  232 aagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaataaa 321  Q
    |||||||| |||||||||||| || |||| ||||||||| ||||||||| ||||| ||||||||| ||||||||||| ||| ||||||||    
T  45541663 aagaacttatgaaaacagcttatg-acat-gttcataagctgttttcaggttattctcataagttatccaagatagcttatgaaaataaa 45541576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 180 - 252
Target Start/End: Original strand, 9832680 - 9832752
Alignment:
Q  180 gattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagctt 252  Q
    ||||| ||||||||||||||| |||||||||||||| ||| | |||||| |  ||||||||||||||||||||    
T  9832680 gattgacttatttgagcttatttattgacataagttttgtcaaactgtttgggagaacttttgaaaacagctt 9832752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 257 - 309
Target Start/End: Complemental strand, 31403427 - 31403375
Alignment:
Q  257 acattgttcataagttgttttcagcttattttcataagttctccaagatagcc 309  Q
    |||||||||||||||||||| ||||||||||||| | ||||||||||||||||    
T  31403427 acattgttcataagttgtttacagcttattttcacaggttctccaagatagcc 31403375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 171 - 307
Target Start/End: Original strand, 42747698 - 42747834
Alignment:
Q  171 gcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataag 270  Q
    ||||||| || ||| |||||||||| ||||||| |  |||||||  ||||||||||||    ||||||| |||||||| |||   ||||||||| |||||    
T  42747698 gcctgtttggtttgacttatttgagtttatctacttccataagtattgtgagactgtttttgagaacttatgaaaacaactttatgacattgtttataag 42747797  T
Q  271 ttgttttcagcttattttcataagttctccaagatag 307  Q
     |||||||  |||||||||| ||||| ||||||||||    
T  42747798 ctgttttctccttattttcagaagttatccaagatag 42747834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 179 - 302
Target Start/End: Original strand, 31365233 - 31365355
Alignment:
Q  179 ggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttc 278  Q
    ||||||||||||||||| |||||||||| ||||| || ||||| |||||| |  ||||||| |||| ||||||| | |||| | ||||||| |  |||||    
T  31365233 ggattggcttatttgagtttatctattggcataatttttgtgacactgtttgggagaacttatgaatacagcttat-gacaattttcataaatctttttc 31365331  T
Q  279 agcttattttcataagttctccaa 302  Q
    | || |||||||||| ||||||||    
T  31365332 aactcattttcataaattctccaa 31365355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 307
Target Start/End: Original strand, 46778120 - 46778241
Alignment:
Q  184 ggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagctt 283  Q
    ||||||||||||||||| || || ||||| || ||||| || ||| |  ||||||| |||||||| ||| | |||||| |||||||||| | ||||||||    
T  46778120 ggcttatttgagcttatttagtggcataaattttgtgaaaccgtttgggagaacttatgaaaacaacttat-gacatttttcataagttttgttcagctt 46778218  T
Q  284 attttcataagttctccaagatag 307  Q
    | ||||||||||| ||||||||||    
T  46778219 a-tttcataagttgtccaagatag 46778241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 181 - 319
Target Start/End: Original strand, 45264292 - 45264429
Alignment:
Q  181 attggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcag 280  Q
    ||||||||||||||| | |  || |||||||||||  ||||||||| | || ||||||| |||||||| |||  || ||||||||||||| ||||||||     
T  45264292 attggcttatttgagataacttactgacataagtttagtgagactggttgagagaacttatgaaaacaacttacgg-cattgttcataagctgttttcac 45264390  T
Q  281 cttattttcataagttctccaagatagcctataaaaata 319  Q
    ||||||||||  | || ||||||| ||| ||| ||||||    
T  45264391 cttattttcaccaattttccaagagagcttatgaaaata 45264429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 308
Target Start/End: Complemental strand, 584192 - 584064
Alignment:
Q  179 ggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttc 278  Q
    |||||| |||||||||||||||||| |  |||||||| ||||||||||||    |||| || ||||||||||||  || || | |||||| |||  |||     
T  584192 ggattgacttatttgagcttatctactagcataagttctgtgagactgttttggagaatttatgaaaacagcttacgg-cagttttcataggtttcttta 584094  T
Q  279 agcttattttcataagttctccaagatagc 308  Q
    |||||| ||||||||||||| |||||||||    
T  584093 agcttaatttcataagttcttcaagatagc 584064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 294
Target Start/End: Original strand, 25447163 - 25447283
Alignment:
Q  173 ctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagtt 272  Q
    ||||| |||||| |||||||||| ||||||| ||||||||||| |||||||||||| | |||||| |  | || ||| || | | ||||||||| ||| |    
T  25447163 ctgtttggattgacttatttgagtttatctactgacataagttttgtgagactgtttgcaagaacatacggaagcagtttat-gccattgttcacaagct 25447261  T
Q  273 gttttcagcttattttcataag 294  Q
    ||||||||||| || |||||||    
T  25447262 gttttcagctttttctcataag 25447283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 317
Target Start/End: Original strand, 35394498 - 35394559
Alignment:
Q  256 gacattgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    ||||||||||||||| |||||||| ||||||||||||| |||| ||||||||| ||| ||||    
T  35394498 gacattgttcataagctgttttcaacttattttcataaattcttcaagatagcttatgaaaa 35394559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 261 - 305
Target Start/End: Complemental strand, 36887569 - 36887525
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctccaagat 305  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||    
T  36887569 tgttcataagatgttttcagcttattttcataagttcttcaagat 36887525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 265 - 317
Target Start/End: Complemental strand, 37273195 - 37273143
Alignment:
Q  265 cataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    ||||||||||||||| ||||||| |||||||||||||||||||| ||| ||||    
T  37273195 cataagttgttttcaacttatttccataagttctccaagatagcttatgaaaa 37273143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 197 - 313
Target Start/End: Complemental strand, 37389311 - 37389196
Alignment:
Q  197 ttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcataagtt 296  Q
    |||||||  |||||||||| ||||||||| || |  ||||||| |||||||| ||| || |||||||||| | | || ||| |||||||| ||||||||     
T  37389311 ttatctacagacataagttttgtgagactcttcgggagaacttatgaaaacaacttatg-acattgttcaaatgctgcttttagcttattctcataagta 37389213  T
Q  297 ctccaagatagcctata 313  Q
    |||||||||||| ||||    
T  37389212 ctccaagatagcttata 37389196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 220 - 320
Target Start/End: Original strand, 54837000 - 54837098
Alignment:
Q  220 gagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaata 319  Q
    ||||||||| | ||||| || |||||||||||| || |||| |||||||| |||||||| ||||||||| ||||| | ||||||||||| ||| ||||||    
T  54837000 gagactgtttggaagaatttatgaaaacagcttatg-acat-gttcataacttgttttccgcttatttttataagctgtccaagatagcttatgaaaata 54837097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 318
Target Start/End: Complemental strand, 466350 - 466201
Alignment:
Q  168 agggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcat 267  Q
    |||||||||| ||||||||| ||  ||||||| | | |||||||  || |||||||||||| |  | |||||   |||||||||| |  ||||| ||| |    
T  466350 agggcctgtttggattggctcatcagagcttaaccactgacatagattttgtgagactgtttgggataacttacaaaaacagctttta-acatttttctt 466252  T
Q  268 aagttgttttcagcttattttcataagttctccaagatagcctataaaaat 318  Q
    ||| | |||| |||||||||||||||||||||||| ||||| ||| |||||    
T  466251 aagctttttttagcttattttcataagttctccaacatagcttatgaaaat 466201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 319
Target Start/End: Original strand, 34924547 - 34924601
Alignment:
Q  265 cataagttgttttcagcttattttcataagttctccaagatagcctataaaaata 319  Q
    |||| ||||||||||||||||||||||||| |||| |||||||| ||| ||||||    
T  34924547 catatgttgttttcagcttattttcataagctctctaagatagcttatgaaaata 34924601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 319
Target Start/End: Original strand, 39723178 - 39723303
Alignment:
Q  196 cttatctattgacataagttgtgtgagactgtta----gaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcat 291  Q
    ||||| || ||||||||||  |||||||||||||    | |||||||| | |||||||||| || |||| ||||||||| ||||||||||||||| ||||    
T  39723178 cttatatactgacataagtgttgtgagactgttatttggcaagaacttatcaaaacagcttatg-acat-gttcataagctgttttcagcttattctcat 39723275  T
Q  292 aagttctccaagatagcctataaaaata 319  Q
    ||||  || ||||||| |||| ||||||    
T  39723276 aagtcatcgaagataggctattaaaata 39723303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 252
Target Start/End: Complemental strand, 43046823 - 43046738
Alignment:
Q  166 taagggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagctt 252  Q
    ||||||| ||||  ||||| ||||||||| |||||||||| ||||| ||| |||||||||||| |  ||||||| ||||||||||||    
T  43046823 taagggcatgtttagattgacttatttgaacttatctatt-acatatgttttgtgagactgtttgggagaacttatgaaaacagctt 43046738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 262 - 308
Target Start/End: Complemental strand, 47513717 - 47513671
Alignment:
Q  262 gttcataagttgttttcagcttattttcataagttctccaagatagc 308  Q
    ||||||||||||||||||  ||||||||||||| |||||||||||||    
T  47513717 gttcataagttgttttcaatttattttcataagctctccaagatagc 47513671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 168 - 317
Target Start/End: Complemental strand, 902080 - 901933
Alignment:
Q  168 agggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcat 267  Q
    |||| ||||| ||||||  ||||||||||||||||| || || ||||| || | | ||||| |  | ||||| |||||||||||  |  ||||| | |||    
T  902080 agggtctgtttggattgctttatttgagcttatctagtg-cagaagttttgcgtggctgtttgggaaaacttatgaaaacagctaata-acattttccat 901983  T
Q  268 aagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    ||| | |||||| |||||||||||||||||||||| ||||| ||||||||    
T  901982 aagcttttttcaacttattttcataagttctccaatatagcttataaaaa 901933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 181 - 270
Target Start/End: Complemental strand, 5436216 - 5436128
Alignment:
Q  181 attggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataag 270  Q
    ||||||||||||||| ||||| | || |||||||| ||||| ||||||   |||||||| |||||||| ||| | |||||||||||||||    
T  5436216 attggcttatttgagtttatcaactgtcataagttttgtgacactgttttgaagaacttctgaaaacaacttat-gacattgttcataag 5436128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 16072958 - 16073007
Alignment:
Q  172 cctgttaggattggcttatttgagcttatctattgacataagttgtgtga 221  Q
    |||||| |||||| |||||||||||||||||| ||||||||||| |||||    
T  16072958 cctgtttggattgacttatttgagcttatctaatgacataagttttgtga 16073007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 179 - 212
Target Start/End: Original strand, 33880481 - 33880514
Alignment:
Q  179 ggattggcttatttgagcttatctattgacataa 212  Q
    ||||||||||||||||||||||||||||||||||    
T  33880481 ggattggcttatttgagcttatctattgacataa 33880514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 261 - 306
Target Start/End: Complemental strand, 40665494 - 40665449
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctccaagata 306  Q
    |||||||||| ||||||||||||||||| ||||| |||||||||||    
T  40665494 tgttcataagctgttttcagcttatttttataagctctccaagata 40665449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 164 - 228
Target Start/End: Complemental strand, 47132477 - 47132415
Alignment:
Q  164 attaagggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgtt 228  Q
    |||||| ||||||| ||||||||||||||||||||||||| || |  ||||| ||||||||||||    
T  47132477 attaagagcctgtttggattggcttatttgagcttatctactggc--aagttttgtgagactgtt 47132415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 261 - 306
Target Start/End: Original strand, 52440667 - 52440712
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctccaagata 306  Q
    ||||||||||||||||||| || ||||||||||||||| |||||||    
T  52440667 tgttcataagttgttttcaactaattttcataagttcttcaagata 52440712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 202
Target Start/End: Original strand, 1820043 - 1820079
Alignment:
Q  166 taagggcctgttaggattggcttatttgagcttatct 202  Q
    |||||||||||| ||||||||||||||||||||||||    
T  1820043 taagggcctgtttggattggcttatttgagcttatct 1820079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 5448586 - 5448542
Alignment:
Q  183 tggcttatttgagcttatctattgacataagttgtgtgagactgt 227  Q
    ||||||||||||||||||||| ||||||||||| ||| |||||||    
T  5448586 tggcttatttgagcttatctactgacataagttttgtaagactgt 5448542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 20669237 - 20669181
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||||||||| ||||||| |||||||| |||||| ||||||||||||| ||| ||||    
T  20669237 tgttcataagctgttttccgcttatttacataagctctccaagatagcttatgaaaa 20669181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 317
Target Start/End: Complemental strand, 25186046 - 25185994
Alignment:
Q  265 cataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    ||||||||||||||| |||||||||| ||| | ||||||||||| ||||||||    
T  25186046 cataagttgttttcatcttattttcacaagatttccaagatagcttataaaaa 25185994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 26320107 - 26320163
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||||||||||||||||||| |||||||| |||||||| ||||| ||| ||| ||||    
T  26320107 tgttcataagttgttttcagtttattttcgtaagttcttcaagagagcttatgaaaa 26320163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 27787076 - 27787020
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||||||||| ||||||||||||  |||||| |||||||||||||||| ||| ||||    
T  27787076 tgttcataagctgttttcagcttgatttcattagttctccaagatagcatatgaaaa 27787020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 206
Target Start/End: Original strand, 27896089 - 27896129
Alignment:
Q  166 taagggcctgttaggattggcttatttgagcttatctattg 206  Q
    |||||||||||| |||||||||||||||| |||||||||||    
T  27896089 taagggcctgtttggattggcttatttgaacttatctattg 27896129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 307
Target Start/End: Original strand, 28622006 - 28622050
Alignment:
Q  263 ttcataagttgttttcagcttattttcataagttctccaagatag 307  Q
    |||||||| ||||||||| |||||||||||||||||| |||||||    
T  28622006 ttcataagctgttttcaggttattttcataagttctcgaagatag 28622050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 30573919 - 30573975
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||||||||| |||||||||||||| ||||| || ||||||||||||| ||| ||||    
T  30573919 tgttcataagctgttttcagcttatgttcatcagctctccaagatagcttatgaaaa 30573975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 42799880 - 42799960
Alignment:
Q  169 gggcctgttaggattggcttatttgagc-ttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaaca 248  Q
    ||||||||| |||||||||||||||||| ||||||| ||||||| ||| ||||| ||| || |  ||||||| ||||||||    
T  42799880 gggcctgtttggattggcttatttgagctttatctactgacatatgttttgtgaaactctttgggagaacttatgaaaaca 42799960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 317
Target Start/End: Complemental strand, 49557021 - 49556867
Alignment:
Q  168 agggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttag------aaagaacttttgaaaacagcttctggacatt 261  Q
    ||||||| || |||||||||||| |||||||||| | || |||||||| ||||||||| ||||      | |||| || |||||||||||| | |||| |    
T  49557021 agggcctatttggattggcttatctgagcttatcaagtggcataagttttgtgagactcttagtctttcagagaatttatgaaaacagcttat-gacaat 49556923  T
Q  262 gttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
     |||||||| | |||||| ||||||| |  |||| |||||  ||||||||||||||    
T  49556922 tttcataagcttttttcaacttatttcctcaagtcctccagtatagcctataaaaa 49556867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 50600194 - 50600230
Alignment:
Q  272 tgttttcagcttattttcataagttctccaagatagc 308  Q
    ||||||||||||||||||||||||||||||| |||||    
T  50600194 tgttttcagcttattttcataagttctccaatatagc 50600230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 261 - 320
Target Start/End: Complemental strand, 2825212 - 2825153
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaataa 320  Q
    |||||||||  | |||| |||||||||||||||| ||||||||||||| ||| |||||||    
T  2825212 tgttcataaagtattttaagcttattttcataagctctccaagatagcttatgaaaataa 2825153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 171 - 302
Target Start/End: Original strand, 13715488 - 13715618
Alignment:
Q  171 gcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataag 270  Q
    ||||||| |||| ||||||||||| |||||||| |  |||| ||| |||||||||||| |  |||||||   |||||||||| | ||||   ||||||||    
T  13715488 gcctgttcggatcggcttatttgatcttatctactagcatatgttttgtgagactgtttggtagaacttcctaaaacagcttat-gacaactttcataag 13715586  T
Q  271 ttgttttcagcttattttcataagttctccaa 302  Q
       |||||| |||||||||||||||| |||||    
T  13715587 catttttcaacttattttcataagttgtccaa 13715618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 265 - 320
Target Start/End: Original strand, 16790387 - 16790442
Alignment:
Q  265 cataagttgttttcagcttattttcataagttctccaagatagcctataaaaataa 320  Q
    |||||| ||||||||| ||||||||||||| | ||||||||||| ||| |||||||    
T  16790387 cataagctgttttcagtttattttcataagctatccaagatagcttatgaaaataa 16790442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 265 - 308
Target Start/End: Original strand, 21862184 - 21862227
Alignment:
Q  265 cataagttgttttcagcttattttcataagttctccaagatagc 308  Q
    ||||||||||||||||||||||| |||||| ||||| |||||||    
T  21862184 cataagttgttttcagcttatttccataagctctcccagatagc 21862227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 274 - 317
Target Start/End: Original strand, 33972752 - 33972795
Alignment:
Q  274 ttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    ||||||||||||||||| ||||||||||| ||||| ||||||||    
T  33972752 ttttcagcttattttcacaagttctccaaaatagcttataaaaa 33972795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 261 - 308
Target Start/End: Complemental strand, 41057219 - 41057172
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctccaagatagc 308  Q
    |||||||||||| ||||||||||||| |||||||||||| || |||||    
T  41057219 tgttcataagttattttcagcttattatcataagttctctaatatagc 41057172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 264 - 307
Target Start/End: Original strand, 50946294 - 50946337
Alignment:
Q  264 tcataagttgttttcagcttattttcataagttctccaagatag 307  Q
    |||||| ||||| |||||||||||||||||||||||||| ||||    
T  50946294 tcataaattgttctcagcttattttcataagttctccaaaatag 50946337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 212
Target Start/End: Original strand, 5407365 - 5407411
Alignment:
Q  166 taagggcctgttaggattggcttatttgagcttatctattgacataa 212  Q
    |||||||||||| | ||| ||||||||||||||||||||||| ||||    
T  5407365 taagggcctgtttgcattagcttatttgagcttatctattgatataa 5407411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 308
Target Start/End: Complemental strand, 20257698 - 20257553
Alignment:
Q  164 attaagggcctgttaggattggcttatttgag-cttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattg 262  Q
    ||||||| |||||| |||||||||||||||||  |||||||  | ||||| || |||||||||||| |  ||||||| ||||| |||||  | |||| |     
T  20257698 attaaggacctgtttggattggcttatttgagttttatctacagccataaattttgtgagactgtttgggagaacttatgaaagcagctaat-gacaatt 20257600  T
Q  263 ttcataagttgttttcagctta-ttttcataagttctccaagatagc 308  Q
    |||||||||| |||  | |||| |||||||||| ||||||| |||||    
T  20257599 ttcataagttttttaaaacttatttttcataagctctccaatatagc 20257553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 308
Target Start/End: Original strand, 26990509 - 26990543
Alignment:
Q  274 ttttcagcttattttcataagttctccaagatagc 308  Q
    ||||||||||||||||||||||||||| |||||||    
T  26990509 ttttcagcttattttcataagttctccgagatagc 26990543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 308
Target Start/End: Original strand, 34235019 - 34235147
Alignment:
Q  181 attggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgt--tcataagttgttttc 278  Q
    |||| |||||| ||||||||||| | ||||||||| || | ||| ||| || ||||||| |||| ||||||| | |||||| |  ||||||| |||| ||    
T  34235019 attgacttattcgagcttatctactaacataagttttgcgtgaccgtttgagagaacttatgaatacagcttat-gacattattgtcataagctgttatc 34235117  T
Q  279 agcttattttcataagttctccaagatagc 308  Q
    || | |||| || |||||||||||||||||    
T  34235118 aggtcatttgcacaagttctccaagatagc 34235147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 307
Target Start/End: Original strand, 34414793 - 34414835
Alignment:
Q  265 cataagttgttttcagcttattttcataagttctccaagatag 307  Q
    |||||||||||||||||||||||||||||  |||||| |||||    
T  34414793 cataagttgttttcagcttattttcataaactctccatgatag 34414835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 307
Target Start/End: Complemental strand, 36139943 - 36139897
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctccaagatag 307  Q
    |||||| ||| ||||||||||||||||||||||| ||| ||||||||    
T  36139943 tgttcacaagctgttttcagcttattttcataagctcttcaagatag 36139897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 318
Target Start/End: Original strand, 36878757 - 36878819
Alignment:
Q  256 gacattgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaat 318  Q
    |||||||| || |||  ||||||||||| |||||||||||||| ||||||||| ||| |||||    
T  36878757 gacattgtccacaagcggttttcagctttttttcataagttcttcaagatagcttatgaaaat 36878819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 317
Target Start/End: Original strand, 40608388 - 40608442
Alignment:
Q  263 ttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||||||| ||||||||||||| || ||||||||||||| |||||  ||||||||    
T  40608388 ttcataagctgttttcagcttacttccataagttctccaggatagtttataaaaa 40608442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 308
Target Start/End: Complemental strand, 41633420 - 41633378
Alignment:
Q  266 ataagttgttttcagcttattttcataagttctccaagatagc 308  Q
    |||| |||||||||||||||||||||||| ||||||| |||||    
T  41633420 ataaattgttttcagcttattttcataagctctccaaaatagc 41633378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 317
Target Start/End: Original strand, 44747427 - 44747469
Alignment:
Q  275 tttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||||||||||||||||||||| ||||||||||| ||| ||||    
T  44747427 tttcagcttattttcataagttttccaagatagcttatgaaaa 44747469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 307
Target Start/End: Complemental strand, 48991912 - 48991870
Alignment:
Q  265 cataagttgttttcagcttattttcataagttctccaagatag 307  Q
    |||||||||||||||||||||||||||||  ||||||| ||||    
T  48991912 cataagttgttttcagcttattttcataatctctccaaaatag 48991870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 307
Target Start/End: Complemental strand, 50952440 - 50952352
Alignment:
Q  217 tgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcataagttctccaagatag 307  Q
    |||||||||||| || ||||| |  ||||||||||| || |||| ||||||||  |||||| ||||||||| |||||| ||||||||||||    
T  50952440 tgtgagactgttcgagagaacgtacgaaaacagcttatg-acat-gttcataaactgttttaagcttatttccataagctctccaagatag 50952352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 298
Target Start/End: Original strand, 2128263 - 2128300
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttct 298  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  2128263 tgttcataagctgttttcagcttattttcatacgttct 2128300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 213
Target Start/End: Complemental strand, 22667548 - 22667515
Alignment:
Q  180 gattggcttatttgagcttatctattgacataag 213  Q
    |||||||||||||||||||||||| |||||||||    
T  22667548 gattggcttatttgagcttatctactgacataag 22667515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 213
Target Start/End: Complemental strand, 22724187 - 22724154
Alignment:
Q  180 gattggcttatttgagcttatctattgacataag 213  Q
    |||||||||||||||||||||||| |||||||||    
T  22724187 gattggcttatttgagcttatctactgacataag 22724154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 212
Target Start/End: Complemental strand, 27793018 - 27792985
Alignment:
Q  179 ggattggcttatttgagcttatctattgacataa 212  Q
    ||||||| ||||||||||||||||||||||||||    
T  27793018 ggattggtttatttgagcttatctattgacataa 27792985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 317
Target Start/End: Complemental strand, 32582814 - 32582753
Alignment:
Q  256 gacattgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    ||||||||||| ||| | |||||| ||||||| |||||||||||||| ||||| ||| ||||    
T  32582814 gacattgttcaaaagattttttcaacttatttccataagttctccaaaatagcttatgaaaa 32582753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 294
Target Start/End: Original strand, 45432944 - 45432977
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataag 294  Q
    ||||||||||||||||||||||||||| ||||||    
T  45432944 tgttcataagttgttttcagcttatttccataag 45432977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 306
Target Start/End: Complemental strand, 849762 - 849730
Alignment:
Q  274 ttttcagcttattttcataagttctccaagata 306  Q
    ||||||||||| |||||||||||||||||||||    
T  849762 ttttcagcttaatttcataagttctccaagata 849730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 317
Target Start/End: Original strand, 1217809 - 1217861
Alignment:
Q  265 cataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    ||||||||||||||| |||| |||||||||||||| | |||||| ||| ||||    
T  1217809 cataagttgttttcatcttactttcataagttctcaaggatagcttatgaaaa 1217861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 214
Target Start/End: Complemental strand, 2923629 - 2923589
Alignment:
Q  174 tgttaggattggcttatttgagcttatctattgacataagt 214  Q
    |||| |||||| |||||| ||||||||||||||||||||||    
T  2923629 tgttcggattgacttattcgagcttatctattgacataagt 2923589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 301
Target Start/End: Original strand, 3044264 - 3044304
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctcca 301  Q
    |||||||||| |||||||| |||||||||||||| ||||||    
T  3044264 tgttcataagctgttttcaacttattttcataagctctcca 3044304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 295
Target Start/End: Complemental strand, 5391968 - 5391910
Alignment:
Q  235 aacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcataagt 295  Q
    ||||| |||||||||||| || |||| ||||||||| |||||||| |||||||||||||||    
T  5391968 aacttatgaaaacagcttatg-acat-gttcataagctgttttcaacttattttcataagt 5391910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 313
Target Start/End: Original strand, 23808069 - 23808121
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctccaagatagcctata 313  Q
    |||||| || ||||||||| |||||||||||||  ||||||||||||| ||||    
T  23808069 tgttcacaaattgttttcatcttattttcataaactctccaagatagcttata 23808121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 24785270 - 24785214
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    ||||||||||||||||| ||||||||| |||||| |||| | |||||| ||| ||||    
T  24785270 tgttcataagttgtttttagcttatttacataagctctcgaggatagcttatgaaaa 24785214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 301
Target Start/End: Complemental strand, 25925807 - 25925767
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctcca 301  Q
    |||||||||| |||||||| |||||||||||||| ||||||    
T  25925807 tgttcataagctgttttcaacttattttcataagctctcca 25925767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 26878187 - 26878135
Alignment:
Q  256 gacattgttcataagttgttttcagcttattttcataagttctccaagatagc 308  Q
    ||||||||||||||  |||||||||| ||||||||| | |||| |||||||||    
T  26878187 gacattgttcataaactgttttcagcatattttcattaattcttcaagatagc 26878135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 208 - 304
Target Start/End: Complemental strand, 28240434 - 28240340
Alignment:
Q  208 cataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcataagttctccaaga 304  Q
    |||||||| |||||||| |||  | |||||||  ||||||||||| | ||||||||||| ||| | |||||| ||||||||| ||||||||| ||||    
T  28240434 cataagttttgtgagacagtttaagagaacttaggaaaacagcttat-gacattgttca-aagctattttcaacttattttcctaagttctcgaaga 28240340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 317
Target Start/End: Complemental strand, 32069210 - 32069158
Alignment:
Q  265 cataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||||||| |||| |||||||||||||||  ||||||||||||| ||| ||||    
T  32069210 cataagttctttttagcttattttcataatctctccaagatagcttattaaaa 32069158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 284
Target Start/End: Original strand, 33046724 - 33046829
Alignment:
Q  181 attggcttatttgagcttatctattgacataagttgtgt---gagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgtttt 277  Q
    |||||||||||| || ||||||| || |||||||| |||   ||||||||| |  || ||||  |||||||  ||||| |||||| ||||||||||||||    
T  33046724 attggcttattttagtttatctactggcataagttttgttgcgagactgtttgggaggacttacgaaaacaatttctg-acattggtcataagttgtttt 33046822  T
Q  278 cagctta 284  Q
    |||||||    
T  33046823 cagctta 33046829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 285
Target Start/End: Original strand, 34707459 - 34707525
Alignment:
Q  217 tgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttat 285  Q
    |||||||||||| || |||||||||||||||| ||| | |||| ||| ||||||||||||||| |||||    
T  34707459 tgtgagactgtttgagagaacttttgaaaacaacttgt-gaca-tgtccataagttgttttcaacttat 34707525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 36783339 - 36783395
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||||||||| |||||||||||||| ||||||| | |||||| ||||| ||| ||||    
T  36783339 tgttcataagctgttttcagcttatattcataattgctccaatatagcttatgaaaa 36783395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 293
Target Start/End: Original strand, 40321078 - 40321106
Alignment:
Q  265 cataagttgttttcagcttattttcataa 293  Q
    |||||||||||||||||||||||||||||    
T  40321078 cataagttgttttcagcttattttcataa 40321106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 317
Target Start/End: Complemental strand, 44488936 - 44488892
Alignment:
Q  273 gttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    ||||||||||||||| ||||||||||| |||||||| ||| ||||    
T  44488936 gttttcagcttatttccataagttctctaagatagcttatgaaaa 44488892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 205
Target Start/End: Complemental strand, 51929897 - 51929861
Alignment:
Q  169 gggcctgttaggattggcttatttgagcttatctatt 205  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  51929897 gggcctgtttggattgacttatttgagcttatctatt 51929861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 293
Target Start/End: Original strand, 53736125 - 53736157
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataa 293  Q
    ||||||||||||| |||||||||||||||||||    
T  53736125 tgttcataagttgctttcagcttattttcataa 53736157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 4e-29; HSPs: 91)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 172 - 317
Target Start/End: Original strand, 16937800 - 16937944
Alignment:
Q  172 cctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagt 271  Q
    |||||| ||||||||||||||||||||||||| |  |||||||| ||||||| |||| | |||||||| |||||||||||| | ||||   ||||||||     
T  16937800 cctgtttggattggcttatttgagcttatctactagcataagttttgtgagagtgtttggaagaacttatgaaaacagcttat-gacaaatttcataagc 16937898  T
Q  272 tgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    | |||||||||||||||| |||||||||||| ||||| ||||||||    
T  16937899 ttttttcagcttattttcctaagttctccaatatagcgtataaaaa 16937944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 181 - 316
Target Start/End: Original strand, 1464946 - 1465080
Alignment:
Q  181 attggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcag 280  Q
    |||| |||||||||||||| ||  |  |||||||| || ||||||||| |  ||||||| |||||||||||| ||| ||||| |||||||||||||||||    
T  1464946 attgacttatttgagcttagcttctagcataagttctgcgagactgttcgggagaacttatgaaaacagcttatgg-cattgctcataagttgttttcag 1465044  T
Q  281 cttattttcataagttctccaagatagcctataaaa 316  Q
    |||||||||| |||| |||||||||||| |||||||    
T  1465045 cttattttcacaagtcctccaagatagcttataaaa 1465080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 169 - 307
Target Start/End: Complemental strand, 10640109 - 10639972
Alignment:
Q  169 gggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcata 268  Q
    ||||||||| ||||| ||||||||||| ||||||| ||||||||||| ||||| | |||| |  ||||||| |||||||||||| | |||||| ||||||    
T  10640109 gggcctgtttggattagcttatttgagtttatctactgacataagttttgtgatattgtttgggagaacttatgaaaacagcttat-gacatttttcata 10640011  T
Q  269 agttgttttcagcttattttcataagttctccaagatag 307  Q
    || | |||  |||||||||||||||||||||||| ||||    
T  10640010 agctttttctagcttattttcataagttctccaaaatag 10639972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 170 - 308
Target Start/End: Complemental strand, 42100466 - 42100329
Alignment:
Q  170 ggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataa 269  Q
    |||||||| |||| ||||||||||||||||||||||| ||||| || |||| ||||||  || ||||||| |||||| ||||| | ||||| ||||| ||    
T  42100466 ggcctgtttggatgggcttatttgagcttatctattggcataaattttgtgtgactgtgtgagagaacttgtgaaaatagcttat-gacatagttcaaaa 42100368  T
Q  270 gttgttttcagcttattttcataagttctccaagatagc 308  Q
    | |||||||| ||||||||||||||||||| || |||||    
T  42100367 ggtgttttcatcttattttcataagttctcaaaaatagc 42100329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 174 - 317
Target Start/End: Complemental strand, 11700313 - 11700172
Alignment:
Q  174 tgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttg 273  Q
    |||| ||||| ||||||||||||||||| | || |||||||| ||||||||||||  | ||||||| || ||||| ||| | |||||||||||||| |||    
T  11700313 tgtttggatttgcttatttgagcttatccactggcataagttttgtgagactgtttcacagaacttatggaaacaacttat-gacattgttcataaattg 11700215  T
Q  274 ttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
     ||||| ||||||||||||||||||||| |||||| ||| ||||    
T  11700214 -tttcatcttattttcataagttctccacgatagcatatcaaaa 11700172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 180 - 317
Target Start/End: Complemental strand, 7985114 - 7984978
Alignment:
Q  180 gattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttca 279  Q
    |||||||| ||||||| ||||||| || |||||| | ||||||||| || |  ||| |||  ||||||||||| || || ||||||||||| ||||||||    
T  7985114 gattggctaatttgagattatctactggcataagctttgtgagactatttgggagagcttaagaaaacagcttgtg-acgttgttcataagctgttttca 7985016  T
Q  280 gcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||||||||||||| |||||||||||||| ||| ||||    
T  7985015 gcttattttcataaattctccaagatagcttatgaaaa 7984978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 168 - 316
Target Start/End: Original strand, 12857618 - 12857765
Alignment:
Q  168 agggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcat 267  Q
    ||||| |||| ||||||| ||||||||||| |||||||||| |||||| ||||| ||||||    ||||||| |||||||| ||| || ||| | ||||     
T  12857618 agggcttgtttggattggtttatttgagctcatctattgacgtaagttttgtgaaactgttccggagaacttatgaaaacaacttatg-acaattttcac 12857716  T
Q  268 aagttgttttcagcttattttcataagttctccaagatagcctataaaa 316  Q
    ||  | ||||||||||||||||||||||||||||| ||||| |||||||    
T  12857717 aaccttttttcagcttattttcataagttctccaatatagcttataaaa 12857765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 179 - 317
Target Start/End: Complemental strand, 7674793 - 7674657
Alignment:
Q  179 ggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttc 278  Q
    |||||||||||||||||||||||||   || |||||| |||||||||| | | |||||||| || ||||| ||| || |||| ||| ||||| |||||||    
T  7674793 ggattggcttatttgagcttatctacctacttaagttttgtgagactgcttggaagaacttatggaaacaacttatg-acat-gtttataaggtgttttc 7674696  T
Q  279 agcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||||||||||| || |||||||||||||| ||| ||||    
T  7674695 agcttattttcacaaattctccaagatagcttatgaaaa 7674657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 168 - 316
Target Start/End: Original strand, 12857251 - 12857398
Alignment:
Q  168 agggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcat 267  Q
    ||||| |||| ||||||| |||||||||||||||||||||| |||||| ||||| ||| ||    ||||||| |||||||| ||| | |||| | ||||     
T  12857251 agggcttgtttggattggtttatttgagcttatctattgacgtaagttttgtgaaacttttccggagaacttatgaaaacaacttat-gacaattttcac 12857349  T
Q  268 aagttgttttcagcttattttcataagttctccaagatagcctataaaa 316  Q
    ||| | |||||||||||||||  |||||||||||| ||||| |||||||    
T  12857350 aagcttttttcagcttatttttgtaagttctccaatatagcttataaaa 12857398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 317
Target Start/End: Original strand, 4014362 - 4014485
Alignment:
Q  195 gcttatctattgacataagttgtgtgagactgttagaaagaactt-ttgaaaacagcttctggacattgttcataagttgttttcagcttattttcataa 293  Q
    ||||||||| || ||||| || ||||| |||||| | |||||||| || ||||||| || |   || |||||||||| ||||||||||||||||||||||    
T  4014362 gcttatctactggcataaattttgtgacactgtttggaagaacttgtttaaaacaggttattttcactgttcataagctgttttcagcttattttcataa 4014461  T
Q  294 gttctccaagatagcctataaaaa 317  Q
    ||||||||||||||| ||| ||||    
T  4014462 gttctccaagatagcttatgaaaa 4014485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 179 - 298
Target Start/End: Complemental strand, 6096693 - 6096575
Alignment:
Q  179 ggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttc 278  Q
    |||||| | ||||||| |||||||| || |||||||| ||||||||| |||| ||||||||  | ||||||||| || |||||||||||||| |||| ||    
T  6096693 ggattgacgtatttgaacttatctactggcataagttttgtgagacttttaggaagaacttacgtaaacagcttgtg-acattgttcataagctgttctc 6096595  T
Q  279 agcttattttcataagttct 298  Q
    |||| |||||||||| ||||    
T  6096594 agctcattttcataaattct 6096575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 167 - 317
Target Start/End: Complemental strand, 43301036 - 43300887
Alignment:
Q  167 aagggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttca 266  Q
    |||||| |||| |||||||||||||||||||||| || || |||||||| | |||||||||| |  |||| || | |||||||| | || ||||| |  |    
T  43301036 aagggcatgtttggattggcttatttgagcttatataatggcataagttttatgagactgttggggagaagttataaaaacagcctatg-acattttata 43300938  T
Q  267 taagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    ||||    |||||||||||||||||||||||||||||||||| || |||||    
T  43300937 taagcatgtttcagcttattttcataagttctccaagatagcttacaaaaa 43300887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 186 - 308
Target Start/End: Complemental strand, 12425712 - 12425589
Alignment:
Q  186 cttatttgagcttatctattgacataagttgtgtgagactgttagaaagaactttt--gaaaacagcttctggacattgttcataagttgttttcagctt 283  Q
    |||||||||||||||||| || |||||||| |||||||||||| |  ||||||| |  ||||||| | |    |||||||  |||||||||||||| |||    
T  12425712 cttatttgagcttatctactgtcataagttttgtgagactgtttgggagaacttatatgaaaacaacctaaa-acattgtcaataagttgttttcaactt 12425614  T
Q  284 attttcataagttctccaagatagc 308  Q
    |||||||||||||||||||||||||    
T  12425613 attttcataagttctccaagatagc 12425589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 317
Target Start/End: Complemental strand, 39105548 - 39105473
Alignment:
Q  241 tgaaaacagcttctggacattgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||||||||||| || |||||||||||||| | |||| |||||||||||||||||||||||||||||| ||| ||||    
T  39105548 tgaaaacagcttatg-acattgttcataagctatttttagcttattttcataagttctccaagatagcttatgaaaa 39105473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 179 - 306
Target Start/End: Original strand, 9202672 - 9202798
Alignment:
Q  179 ggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttc 278  Q
    |||||| |||||||||||||||||  || |||||||| ||| ||||| ||    | ||||  || ||||||||| || |||||||||||||| ||||| |    
T  9202672 ggattgacttatttgagcttatctcctggcataagttttgtaagactatttcggaaaactaatggaaacagcttatg-acattgttcataagctgtttcc 9202770  T
Q  279 agcttattttcataagttctccaagata 306  Q
    |||||||||||||||||||| |||||||    
T  9202771 agcttattttcataagttcttcaagata 9202798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 167 - 306
Target Start/End: Complemental strand, 39594965 - 39594827
Alignment:
Q  167 aagggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttca 266  Q
    |||||| |||| |||||| ||||||||||||||||||  |||||||||| ||| ||| |||| |  | ||||| |||||||||| |   || | ||||      
T  39594965 aagggcttgtttggattgacttatttgagcttatctaccgacataagttttgttagattgtttgggacaacttatgaaaacagc-tgaagataatgttat 39594867  T
Q  267 taagttgttttcagcttattttcataagttctccaagata 306  Q
    |||||||||||||||||||||||||||||||  |||||||    
T  39594866 taagttgttttcagcttattttcataagttcaacaagata 39594827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 169 - 304
Target Start/End: Complemental strand, 40426921 - 40426787
Alignment:
Q  169 gggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcata 268  Q
    |||||||||  | ||| |||||||||||||||||| |||||||| || |||||||||||| |   |  ||| |||||||||||| | | |||| ||||||    
T  40426921 gggcctgttttggttgacttatttgagcttatctaatgacataaattttgtgagactgtttgggggtgcttatgaaaacagcttat-gccatttttcata 40426823  T
Q  269 agttgttttcagcttattttcataagttctccaaga 304  Q
    || | |||| ||||||||||| ||||||||||||||    
T  40426822 agcttttttaagcttattttcgtaagttctccaaga 40426787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 317
Target Start/End: Original strand, 7319011 - 7319069
Alignment:
Q  259 attgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||||| ||| ||||    
T  7319011 attgtccataagttgttctcagcttattttcataagttctccaagatagcttatgaaaa 7319069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 308
Target Start/End: Original strand, 35445775 - 35445895
Alignment:
Q  186 cttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttat 285  Q
    |||||||||| ||||||| ||||||||||| ||||||||| || || |||| || |||||||||||| |  ||| ||||||| ||   |||||| |||||    
T  35445775 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat-aaca-tgttcattaggcattttcaccttat 35445872  T
Q  286 tttcataagttctccaagatagc 308  Q
    |||||||| ||||||||||||||    
T  35445873 tttcataaattctccaagatagc 35445895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 179 - 320
Target Start/End: Complemental strand, 9107236 - 9107096
Alignment:
Q  179 ggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttc 278  Q
    |||||| |||||||||| ||||||| ||||||||||| ||||||| |||| |  ||||||  ||||||||||||  ||||| | |||| ||  | |||||    
T  9107236 ggattgacttatttgagtttatctagtgacataagttttgtgagaatgtttgggagaactcatgaaaacagctt-aggacaattttcacaaacttttttc 9107138  T
Q  279 agcttattttcataagttctccaagatagcctataaaaataa 320  Q
     ||| ||||||||||||||||||| ||| | || ||||||||    
T  9107137 tgctaattttcataagttctccaatataacttacaaaaataa 9107096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 168 - 308
Target Start/End: Original strand, 34736440 - 34736579
Alignment:
Q  168 agggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcat 267  Q
    ||||| |||| |||||| |||||||||||||||||  ||||||||||| |||||||| ||| |  |||||||||||| ||||||  | |||| |||| ||    
T  34736440 agggcatgtttggattgacttatttgagcttatctggtgacataagttttgtgagacagtttgggagaacttttgaacacagctaat-gaca-tgtttat 34736537  T
Q  268 aagttgttttcagc-ttattttcataagttctccaagatagc 308  Q
    ||| ||||| |||| || |||| |||| ||||||||||||||    
T  34736538 aagctgtttacagctttgtttttataaattctccaagatagc 34736579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 179 - 301
Target Start/End: Complemental strand, 35446197 - 35446080
Alignment:
Q  179 ggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttc 278  Q
    ||||||||||||||||| |||||||  |||||   || ||||||||| ||| | |||||||| |||||||| || || ||||| ||| |||| | |||||    
T  35446197 ggattggcttatttgagtttatctaaggacat---ttttgtgagactttta-agagaactttcgaaaacagtttatg-acatttttcgtaagcttttttc 35446103  T
Q  279 agcttattttcataagttctcca 301  Q
    |||||||||||||||||||||||    
T  35446102 agcttattttcataagttctcca 35446080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 257 - 304
Target Start/End: Complemental strand, 40848814 - 40848767
Alignment:
Q  257 acattgttcataagttgttttcagcttattttcataagttctccaaga 304  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||    
T  40848814 acattgttcataagttgttttcgccttattttcataagttctccaaga 40848767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 256 - 306
Target Start/End: Complemental strand, 34160801 - 34160751
Alignment:
Q  256 gacattgttcataagttgttttcagcttattttcataagttctccaagata 306  Q
    |||| |||||||||  |||||||||||||||||||||||||||||||||||    
T  34160801 gacactgttcataaactgttttcagcttattttcataagttctccaagata 34160751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 308
Target Start/End: Complemental strand, 29925955 - 29925859
Alignment:
Q  211 aagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcataagttctccaagatagc 308  Q
    ||||| |||||||| ||| |  ||||||| |||||||||||| || ||| |||||||  ||| |||||| |||||||||||||||||||||| |||||    
T  29925955 aagttttgtgagaccgtttgggagaacttatgaaaacagcttatg-acaatgttcatgtgtttttttcaacttattttcataagttctccaatatagc 29925859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 35299924 - 35299875
Alignment:
Q  166 taagggcctgttaggattggcttatttgagcttatctattgacataagtt 215  Q
    |||||||||||| |||||| ||||||||||||||||||||||||| ||||    
T  35299924 taagggcctgtttggattgacttatttgagcttatctattgacatgagtt 35299875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 174 - 287
Target Start/End: Complemental strand, 41419470 - 41419358
Alignment:
Q  174 tgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttg 273  Q
    |||| |||||| |||||||||||| ||||| |||||||| || ||||||| |||| |  | ||||| |||||||||||| | |||||||||||| || |     
T  41419470 tgtttggattgacttatttgagctaatctactgacataaattttgtgagattgtttgggataacttgtgaaaacagcttat-gacattgttcatgagcta 41419372  T
Q  274 ttttcagcttattt 287  Q
    ||||||| ||||||    
T  41419371 ttttcagattattt 41419358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 182 - 246
Target Start/End: Complemental strand, 15015986 - 15015922
Alignment:
Q  182 ttggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaa 246  Q
    |||||||||||||||||||||| ||||||||| | |||||||||||| |  ||||||| ||||||    
T  15015986 ttggcttatttgagcttatctactgacataagctttgtgagactgtttgggagaacttatgaaaa 15015922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 174 - 317
Target Start/End: Complemental strand, 32009844 - 32009701
Alignment:
Q  174 tgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcat-aagtt 272  Q
    |||| |||||| | ||||||||  ||||| ||||| |||||| ||||||||| || | || ||||| |||||||||||| | |||| | ||||| ||| |    
T  32009844 tgtttggattgacatatttgagtctatctgttgacctaagttttgtgagactatttggaaaaacttatgaaaacagcttgt-gacaattttcataaagct 32009746  T
Q  273 gttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
     |||| | ||| |||||||||||||||||| ||||| ||||||||    
T  32009745 tttttgaacttgttttcataagttctccaatatagcttataaaaa 32009701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 170 - 294
Target Start/End: Complemental strand, 41535536 - 41535413
Alignment:
Q  170 ggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataa 269  Q
    |||||||| |||||||||||||| |||||||||| | | || |||| ||||| || ||| |  ||||||| |||||||| ||| | |||||||||| ||     
T  41535536 ggcctgttcggattggcttatttaagcttatctacttatatcagttttgtgaaacagtttgggagaacttatgaaaacaacttat-gacattgttcgtac 41535438  T
Q  270 gttgttttcagcttattttcataag 294  Q
    | ||||||| |||||| ||||||||    
T  41535437 gatgttttccgcttatattcataag 41535413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 169 - 313
Target Start/End: Original strand, 42500157 - 42500298
Alignment:
Q  169 gggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcata 268  Q
    ||||||||| ||||||| |||||||  |||| ||| ||||||||||| ||||||||| || |  ||||||| || ||||| |||   |||| | ||||||    
T  42500157 gggcctgtttggattggtttatttggacttacctactgacataagttttgtgagactctttg-gagaacttatggaaacaactt-acgacaattttcata 42500254  T
Q  269 agttgttttcagcttattttcataagttctccaagatagcctata 313  Q
    || | |||||| |||||||||||||||||||||| ||||| ||||    
T  42500255 agct-ttttcaacttattttcataagttctccaatatagcttata 42500298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 174 - 213
Target Start/End: Original strand, 5377116 - 5377155
Alignment:
Q  174 tgttaggattggcttatttgagcttatctattgacataag 213  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  5377116 tgttcggattggcttatttgagcttatctattgacataag 5377155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 257 - 308
Target Start/End: Complemental strand, 7319475 - 7319424
Alignment:
Q  257 acattgttcataagttgttttcagcttattttcataagttctccaagatagc 308  Q
    |||||||  |||||||| |||||||||||||| |||||||||||||||||||    
T  7319475 acattgtctataagttgctttcagcttatttttataagttctccaagatagc 7319424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 317
Target Start/End: Complemental strand, 15246988 - 15246842
Alignment:
Q  170 ggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataa 269  Q
    |||||||| ||||| | ||||||||||||||||| ||||||||||| | | ||| |||| |  ||||||| ||||| || ||| | |||||  |||||||    
T  15246988 ggcctgtttggatttgtttatttgagcttatctactgacataagttttattagaatgtttgggagaacttatgaaagcaacttat-gacatcattcataa 15246890  T
Q  270 gttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    ||| ||| || |||||||| || | ||||| |||||||| ||| ||||    
T  15246889 gttttttgcaacttatttttatcatttctctaagatagcttatgaaaa 15246842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 211 - 302
Target Start/End: Original strand, 16457935 - 16458025
Alignment:
Q  211 aagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcataagttctccaa 302  Q
    ||||| |||||||||||| |  ||||||| |||||||||||| || ||| | |||||||| | ||||||| ||||||||| |||||||||||    
T  16457935 aagttttgtgagactgtttgggagaacttatgaaaacagcttatg-acagttttcataagctcttttcagtttattttcacaagttctccaa 16458025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 248
Target Start/End: Complemental strand, 32372756 - 32372689
Alignment:
Q  181 attggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaaca 248  Q
    |||||||||||||  |||||||| || |||||||| |||||||||||| | |||||||||| ||||||    
T  32372756 attggcttatttggccttatctactggcataagttttgtgagactgtttggaagaactttttaaaaca 32372689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 308
Target Start/End: Original strand, 7705909 - 7706050
Alignment:
Q  166 taagggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttc 265  Q
    |||||||||||| |||||| ||||||||||| |||||| |  |||||||| |||||  || || |  ||||||| |||||||||||| | |||| | |||    
T  7705909 taagggcctgtttggattgacttatttgagcatatctactagcataagttttgtgacgctctttgggagaacttatgaaaacagcttat-gacagttttc 7706007  T
Q  266 ataagttgttttcagcttattttcataagttctccaagatagc 308  Q
    |   | | ||||| ||||||||||| ||||||||||| |||||    
T  7706008 acctgcttttttcggcttattttcacaagttctccaatatagc 7706050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 263 - 317
Target Start/End: Complemental strand, 7907944 - 7907890
Alignment:
Q  263 ttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||||||||||||||||||||| ||||||||| ||||||||| ||| ||| ||||    
T  7907944 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaa 7907890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 164 - 252
Target Start/End: Original strand, 1773016 - 1773101
Alignment:
Q  164 attaagggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagctt 252  Q
    ||||||||| |||| |||||||||||||| |||||||||| |  |||||||| |||||||||||  |  ||||||| ||||||||||||    
T  1773016 attaagggc-tgtttggattggcttattttagcttatctacttccataagttttgtgagactgt--gggagaacttatgaaaacagctt 1773101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 168 - 301
Target Start/End: Original strand, 3932589 - 3932721
Alignment:
Q  168 agggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcat 267  Q
    |||| ||||| |||||| || |||||||||||||||   ||||||| | |||||||||||| || | |||||   |||||||||| | || | | |||||    
T  3932589 agggactgtttggattgactaatttgagcttatctaacaacataagctttgtgagactgtttgagaaaacttgcaaaaacagcttat-gataattttcat 3932687  T
Q  268 aagttgttttcagcttattttcataagttctcca 301  Q
    ||| | ||| |||||||||||| |||||||||||    
T  3932688 aagctttttacagcttattttcgtaagttctcca 3932721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 263 - 316
Target Start/End: Original strand, 13697766 - 13697819
Alignment:
Q  263 ttcataagttgttttcagcttattttcataagttctccaagatagcctataaaa 316  Q
    |||||||||| |||||| ||||||||||||| |||||||| ||||| |||||||    
T  13697766 ttcataagtttttttcaacttattttcataacttctccaacatagcttataaaa 13697819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 168 - 317
Target Start/End: Original strand, 25461561 - 25461708
Alignment:
Q  168 agggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcat 267  Q
    |||||| ||| ||||||||||||||||||||||||||   |||||||| ||||| |||||| |  |||| | ||| ||| ||||| ||| || | |||||    
T  25461561 agggcccgtttggattggcttatttgagcttatctatcagcataagtt-tgtgatactgtttggtagaattcttggaaatagcttatgg-caattttcat 25461658  T
Q  268 aagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    ||| | |  ||| |||||||| ||||||||||||| | ||| ||||||||    
T  25461659 aagctttgatcaacttattttaataagttctccaatagagcttataaaaa 25461708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 263 - 308
Target Start/End: Original strand, 33533546 - 33533591
Alignment:
Q  263 ttcataagttgttttcagcttattttcataagttctccaagatagc 308  Q
    ||||||||||||||||| ||||||| |||||| |||||||||||||    
T  33533546 ttcataagttgttttcaacttatttccataagctctccaagatagc 33533591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 267 - 308
Target Start/End: Complemental strand, 36326070 - 36326029
Alignment:
Q  267 taagttgttttcagcttattttcataagttctccaagatagc 308  Q
    ||||||||||||||||||||| ||||| ||||||||||||||    
T  36326070 taagttgttttcagcttatttacataaattctccaagatagc 36326029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 313
Target Start/End: Original strand, 42099872 - 42099929
Alignment:
Q  256 gacattgttcataagttgttttcagcttattttcataagttctccaagatagcctata 313  Q
    ||||||||||||||| ||||||  ||||||||||||||||||| ||||| ||| ||||    
T  42099872 gacattgttcataagctgtttttggcttattttcataagttcttcaagaaagcttata 42099929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 212
Target Start/End: Original strand, 3255630 - 3255666
Alignment:
Q  176 ttaggattggcttatttgagcttatctattgacataa 212  Q
    ||||||||||||||||||||||||||||||| |||||    
T  3255630 ttaggattggcttatttgagcttatctattgtcataa 3255666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 305
Target Start/End: Complemental strand, 8334663 - 8334592
Alignment:
Q  233 agaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcataagttctccaagat 305  Q
    ||||||| |||||| ||||| || ||||  ||||||| |||||||||||||||||||||||||| | ||||||    
T  8334663 agaacttatgaaaatagcttatg-acatatttcataaattgttttcagcttattttcataagtttttcaagat 8334592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 11707120 - 11707064
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||| ||||||||||||||||||||||||| ||| ||| ||||||||| ||| ||||    
T  11707120 tgtttataagttgttttcagcttattttcaaaagctctacaagatagcttatgaaaa 11707064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 37611220 - 37611276
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||||||||| ||||||||| |||||| |||||| ||||||||||||| ||| ||||    
T  37611220 tgttcataagctgttttcaggttatttccataagctctccaagatagcttatgaaaa 37611276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 37787950 - 37788006
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||||||||| ||||||||| |||||| |||||| ||||||||||||| ||| ||||    
T  37787950 tgttcataagctgttttcaggttatttccataagctctccaagatagcttatgaaaa 37788006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 317
Target Start/End: Original strand, 41957460 - 41957512
Alignment:
Q  265 cataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    ||||||||||||||| ||||||||||||||||||| | |||||| ||| ||||    
T  41957460 cataagttgttttcatcttattttcataagttctcaaggatagcttatgaaaa 41957512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 42582977 - 42582921
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||||||||  |||||| |||||||||||||||||||||||| ||||| || |||||    
T  42582977 tgttcataaactgttttgagcttattttcataagttctccaatatagcttacaaaaa 42582921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 181 - 248
Target Start/End: Complemental strand, 3520721 - 3520654
Alignment:
Q  181 attggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaaca 248  Q
    ||||||||||||||||| ||||| |   |||||||||||||||||||| |  ||||||| ||||||||    
T  3520721 attggcttatttgagctcatctactagtataagttgtgtgagactgtttgggagaacttatgaaaaca 3520654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 265 - 308
Target Start/End: Original strand, 8177541 - 8177584
Alignment:
Q  265 cataagttgttttcagcttattttcataagttctccaagatagc 308  Q
    |||||||||||||||| ||||||||||||| |||||| ||||||    
T  8177541 cataagttgttttcaggttattttcataagctctccaggatagc 8177584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 161 - 228
Target Start/End: Original strand, 12433079 - 12433146
Alignment:
Q  161 catattaagggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgtt 228  Q
    |||| |||||||||||| |||||||||||||||| ||||| || || |||| ||| ||||||| ||||    
T  12433079 catactaagggcctgtttggattggcttatttgaacttatttactggcataggttttgtgagattgtt 12433146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 263 - 306
Target Start/End: Complemental strand, 31071302 - 31071259
Alignment:
Q  263 ttcataagttgttttcagcttattttcataagttctccaagata 306  Q
    |||||||| |||||||||||||||| ||||| ||||||||||||    
T  31071302 ttcataagctgttttcagcttatttgcataaattctccaagata 31071259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 174 - 287
Target Start/End: Complemental strand, 41534589 - 41534480
Alignment:
Q  174 tgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttg 273  Q
    |||| |||||| |||||||||||| ||||| |||||||| || ||||||| |||| |  | ||||| |||||||||||| | |||   ||||||||| ||    
T  41534589 tgtttggattgacttatttgagctaatctactgacataaattttgtgagattgtttgggataacttgtgaaaacagcttat-gac---gttcataagctg 41534494  T
Q  274 ttttcagcttattt 287  Q
    ||||||| ||||||    
T  41534493 ttttcagattattt 41534480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 291
Target Start/End: Complemental strand, 7808574 - 7808540
Alignment:
Q  257 acattgttcataagttgttttcagcttattttcat 291  Q
    |||||||||||||| ||||||||||||||||||||    
T  7808574 acattgttcataagctgttttcagcttattttcat 7808540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 305
Target Start/End: Original strand, 10272442 - 10272480
Alignment:
Q  267 taagttgttttcagcttattttcataagttctccaagat 305  Q
    |||||||||||||||||||||||||||  ||||||||||    
T  10272442 taagttgttttcagcttattttcataaactctccaagat 10272480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 299
Target Start/End: Original strand, 14182386 - 14182424
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctc 299  Q
    ||||||||| ||||||||| |||||||||||||||||||    
T  14182386 tgttcataaattgttttcaacttattttcataagttctc 14182424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 307
Target Start/End: Original strand, 17258888 - 17258934
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctccaagatag 307  Q
    |||||||||| ||||||||||||||||||||||| ||| || |||||    
T  17258888 tgttcataagctgttttcagcttattttcataagctcttcaggatag 17258934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 239
Target Start/End: Complemental strand, 27298244 - 27298186
Alignment:
Q  181 attggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaactt 239  Q
    |||||||||||||||||||||||||   ||||||| ||||||| |||| || |||||||    
T  27298244 attggcttatttgagcttatctatttctataagttttgtgagattgtttgagagaactt 27298186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 308
Target Start/End: Original strand, 29845444 - 29845486
Alignment:
Q  266 ataagttgttttcagcttattttcataagttctccaagatagc 308  Q
    ||||| |||||||||||||| ||||||| ||||||||||||||    
T  29845444 ataagctgttttcagcttatattcataacttctccaagatagc 29845486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 249
Target Start/End: Complemental strand, 32941631 - 32941545
Alignment:
Q  164 attaagggcctgttaggattggcttatttgagctt-atctattgacataagttgtgtgagactgttagaaagaacttttgaaaacag 249  Q
    |||| ||| ||||| |||||| |||||| |||||| ||||| ||||||||||| |||||||| ||| |  ||||||| |||||||||    
T  32941631 attatgggtctgtttggattgacttattagagctttatctactgacataagttctgtgagaccgtttgggagaacttatgaaaacag 32941545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 317
Target Start/End: Complemental strand, 36318833 - 36318783
Alignment:
Q  267 taagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||| |||||||||||||||| ||||| |||||||||||||| ||| ||||    
T  36318833 taagctgttttcagcttatttacataaattctccaagatagcttatgaaaa 36318783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 308
Target Start/End: Original strand, 38104867 - 38104909
Alignment:
Q  266 ataagttgttttcagcttattttcataagttctccaagatagc 308  Q
    |||||||||||||||||||||| |||||| |||| ||||||||    
T  38104867 ataagttgttttcagcttatttccataagctctctaagatagc 38104909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 317
Target Start/End: Complemental strand, 2568750 - 2568667
Alignment:
Q  232 aagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||||||| |||||||||||| || ||||  |||||||||| |||| ||||||||||||| || |||||| |||||| ||| ||||    
T  2568750 aagaacttatgaaaacagcttatg-acata-ttcataagttatttttagcttattttcattagctctccatgatagcttatgaaaa 2568667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 298
Target Start/End: Complemental strand, 4625868 - 4625756
Alignment:
Q  186 cttatttgagcttatctattgacataagttgtgtgagactgt-tagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagctta 284  Q
    ||||||||||||||||||  || ||||||| |||  ||| || | |||| || || |||||||||||| | || ||||||||||  ||||||||| ||||    
T  4625868 cttatttgagcttatctacggaaataagttttgtaggaccgtctggaaataatttatgaaaacagcttat-gaaattgttcatacattgttttcaactta 4625770  T
Q  285 ttttcataagttct 298  Q
    |||||| |||||||    
T  4625769 ttttcaaaagttct 4625756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 205
Target Start/End: Complemental strand, 9174977 - 9174936
Alignment:
Q  164 attaagggcctgttaggattggcttatttgagcttatctatt 205  Q
    ||||||||| |||| |||||| ||||||||||||||||||||    
T  9174977 attaagggcatgtttggattgacttatttgagcttatctatt 9174936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 299
Target Start/End: Original strand, 10280569 - 10280641
Alignment:
Q  224 ctgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcataagttctc 299  Q
    ||||| |||||||||| || ||||||||| || |   ||| ||||||||||| ||||||||||| |||||||||||    
T  10280569 ctgtttgaaagaacttatggaaacagcttatgaa---tgtccataagttgttatcagcttatttccataagttctc 10280641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 319
Target Start/End: Original strand, 19460330 - 19460449
Alignment:
Q  198 tatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcataagttc 297  Q
    |||||| || ||||||||  |||||||||||    |||||||||| ||||| ||| || | ||| |||||||| ||||| ||||||||||||||||||||    
T  19460330 tatctactggcataagtttagtgagactgtttaggagaacttttggaaacaacttatg-atatttttcataagctgttt-cagcttattttcataagttc 19460427  T
Q  298 tccaagatagcctataaaaata 319  Q
    |  |||||| | ||| ||||||    
T  19460428 ttgaagataacttatgaaaata 19460449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 306
Target Start/End: Original strand, 28413289 - 28413334
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctccaagata 306  Q
    |||||||||| |||||||||||||||| |||||  |||||||||||    
T  28413289 tgttcataagctgttttcagcttatttccataaactctccaagata 28413334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 320
Target Start/End: Complemental strand, 39477946 - 39477889
Alignment:
Q  263 ttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaataa 320  Q
    |||| ||||| ||||| ||||||||||| |||||||| || ||||| |||||||||||    
T  39477946 ttcaaaagtttttttctgcttattttcagaagttctctaacatagcttataaaaataa 39477889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 252
Target Start/End: Complemental strand, 40452367 - 40452294
Alignment:
Q  179 ggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagctt 252  Q
    |||||| | ||| ||||||||| || ||  |||||||||||||||||||| || ||||||  ||||||||||||    
T  40452367 ggattgacatatatgagcttatatactgcaataagttgtgtgagactgtttgagagaactgatgaaaacagctt 40452294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 42647042 - 42647005
Alignment:
Q  173 ctgttaggattggcttatttgagcttatctattgacat 210  Q
    ||||| ||||||||||||||||||||||||| ||||||    
T  42647042 ctgtttggattggcttatttgagcttatctactgacat 42647005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 301
Target Start/End: Complemental strand, 1899215 - 1899179
Alignment:
Q  265 cataagttgttttcagcttattttcataagttctcca 301  Q
    ||||||||||||||||||||||| ||||| |||||||    
T  1899215 cataagttgttttcagcttatttccataaattctcca 1899179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 215
Target Start/End: Original strand, 2973467 - 2973503
Alignment:
Q  179 ggattggcttatttgagcttatctattgacataagtt 215  Q
    |||||||||||||| |||||||||| |||||||||||    
T  2973467 ggattggcttatttaagcttatctagtgacataagtt 2973503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 300
Target Start/End: Original strand, 5721233 - 5721261
Alignment:
Q  272 tgttttcagcttattttcataagttctcc 300  Q
    |||||||||||||||||||||||||||||    
T  5721233 tgttttcagcttattttcataagttctcc 5721261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 8651259 - 8651299
Alignment:
Q  162 atattaagggcctgttaggattggcttatttgagcttatct 202  Q
    ||||||||||| |||| |||||| |||||||||||||||||    
T  8651259 atattaagggcatgtttggattgccttatttgagcttatct 8651299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 301
Target Start/End: Original strand, 10125723 - 10125763
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctcca 301  Q
    |||| ||||| ||||||||||||||||||||||| ||||||    
T  10125723 tgttgataaggtgttttcagcttattttcataagctctcca 10125763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 269 - 317
Target Start/End: Original strand, 12242723 - 12242771
Alignment:
Q  269 agttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||||||||||||||| || |||||| ||||||||||||| ||| ||||    
T  12242723 agttgttttcagcttacttccataagctctccaagatagcttatgaaaa 12242771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 313
Target Start/End: Complemental strand, 12521593 - 12521541
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctccaagatagcctata 313  Q
    |||||||||| |||||||||||||||| |||||| ||| ||| ||||| ||||    
T  12521593 tgttcataagctgttttcagcttatttccataagctcttcaaaatagcttata 12521541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 298
Target Start/End: Complemental strand, 26618233 - 26618201
Alignment:
Q  266 ataagttgttttcagcttattttcataagttct 298  Q
    ||||||||||||||||||||||| |||||||||    
T  26618233 ataagttgttttcagcttatttttataagttct 26618201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 32059364 - 32059420
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    ||||||| |||||||||||||||||||  |||||||||| | |||||| ||| ||||    
T  32059364 tgttcatgagttgttttcagcttatttcgataagttctctaggatagcttatgaaaa 32059420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 317
Target Start/End: Original strand, 32194088 - 32194140
Alignment:
Q  265 cataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||||||||||||||||||||||  ||||| |||| |||||||| || |||||    
T  32194088 cataagttgttttcagcttatttatataagctctcaaagatagcttaaaaaaa 32194140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 34102226 - 34102286
Alignment:
Q  168 agggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgtt 228  Q
    |||||||||| ||| |  |||||||||||||| |||||| |||||||| ||||| ||||||    
T  34102226 agggcctgtttggaatcacttatttgagcttaactattggcataagttttgtgacactgtt 34102286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 301
Target Start/End: Complemental strand, 35055231 - 35055192
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctcca 301  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  35055231 tgttcataagttgtttgcagctta-tttcataagttctcca 35055192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #88
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 301
Target Start/End: Complemental strand, 35071973 - 35071934
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctcca 301  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  35071973 tgttcataagttgtttgcagctta-tttcataagttctcca 35071934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #89
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 317
Target Start/End: Complemental strand, 36639583 - 36639531
Alignment:
Q  265 cataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    ||||||||||||||  |||||||||||||| ||| ||||||||| ||| ||||    
T  36639583 cataagttgttttcctcttattttcataagctcttcaagatagcttatgaaaa 36639531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #90
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 317
Target Start/End: Complemental strand, 37954770 - 37954695
Alignment:
Q  241 tgaaaacagcttctggacattgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||||||||||| || | ||| ||||| || | |||||| |||||||||||| ||||||||| ||||| ||||||||    
T  37954770 tgaaaacagcttatgaaaatt-ttcattagcttttttcaacttattttcatatgttctccaatatagcttataaaaa 37954695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #91
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 311
Target Start/End: Complemental strand, 42646738 - 42646682
Alignment:
Q  255 ggacattgttcataagttgttttcagcttattttcataagttctccaagatagccta 311  Q
    ||||||| |||||||| | |||| || |||||| ||||||||||| |||||||||||    
T  42646738 ggacatttttcataagctttttttagtttatttccataagttctcgaagatagccta 42646682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 7e-28; HSPs: 86)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 173 - 308
Target Start/End: Original strand, 13126494 - 13126628
Alignment:
Q  173 ctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagtt 272  Q
    ||||| |||||||||||||| |||||| ||| | ||||||||| |||||||||||| | |||||||| | |||||||||| | ||||||  ||||||| |    
T  13126494 ctgtttggattggcttattttagcttacctactaacataagttttgtgagactgtttggaagaacttataaaaacagcttat-gacatttatcataagct 13126592  T
Q  273 gttttcagcttattttcataagttctccaagatagc 308  Q
     |||||||||||||||||||||||||| ||||||||    
T  13126593 tttttcagcttattttcataagttctcgaagatagc 13126628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 170 - 317
Target Start/End: Original strand, 17822780 - 17822926
Alignment:
Q  170 ggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataa 269  Q
    |||||||| |||||  |||||||||||||||||| ||||||||||| ||||||||| ||    ||||| | |||||||||||| || ||||| |||||||    
T  17822780 ggcctgtttggattaacttatttgagcttatctactgacataagttctgtgagactatttaggagaacatatgaaaacagcttatg-acatttttcataa 17822878  T
Q  270 gttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    | | |||| |||||||||||||||||||||||||||||| ||| ||||    
T  17822879 gctttttttagcttattttcataagttctccaagatagcttatgaaaa 17822926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 166 - 308
Target Start/End: Complemental strand, 24169422 - 24169281
Alignment:
Q  166 taagggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttc 265  Q
    ||||||| |||| ||||||||||||| ||| ||||||| || |||||||| ||||||||| || || ||||||||| |||| ||||| | |||||| |||    
T  24169422 taagggcttgtttggattggcttattagagtttatctactggcataagttttgtgagactatttgagagaacttttaaaaatagcttat-gacatttttc 24169324  T
Q  266 ataagttgttttcagcttattttcataagttctccaagatagc 308  Q
    ||||| | |||||| |||||||||||||| |||||||||||||    
T  24169323 ataagattttttcaacttattttcataagctctccaagatagc 24169281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 164 - 317
Target Start/End: Original strand, 27043739 - 27043891
Alignment:
Q  164 attaagggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgt 263  Q
    |||||||| ||||| |||||| |||||||||||||||||| ||||||||||| ||||| |||||| | ||||| || || ||| ||||| ||| ||| ||    
T  27043739 attaagggtctgtttggattgacttatttgagcttatctactgacataagttttgtgaaactgtttggaagaagttatgcaaatagcttatgg-catcgt 27043837  T
Q  264 tcataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
     ||||| ||||||| ||||||| |||||| ||||||||||||||  ||||||||    
T  27043838 ccataaattgtttttagcttatattcatacgttctccaagatagtttataaaaa 27043891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 171 - 317
Target Start/End: Complemental strand, 54426197 - 54426052
Alignment:
Q  171 gcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataag 270  Q
    ||||||| ||||||||||||||||||||||||| || |||||||| |||||||||| | |  |||||||  ||||||||||| | |||| | ||||||||    
T  54426197 gcctgtttggattggcttatttgagcttatctactggcataagttttgtgagactgcttgggagaacttaggaaaacagcttat-gacaattttcataag 54426099  T
Q  271 ttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
     | ||||||  ||||||||||||||||||||| ||||  ||||||||    
T  54426098 cttttttcaagttattttcataagttctccaatatagattataaaaa 54426052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 179 - 308
Target Start/End: Original strand, 52315121 - 52315249
Alignment:
Q  179 ggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttc 278  Q
    |||||| |||||||||| ||||||| |||| |||||| ||||||| |||| | |||||||| | |||||| ||| |  ||||| ||||||||||| ||||    
T  52315121 ggattgacttatttgagtttatctactgacgtaagttttgtgagattgtttggaagaacttatcaaaacaacttatc-acattattcataagttgctttc 52315219  T
Q  279 agcttattttcataagttctccaagatagc 308  Q
    |||||||||||||||||| ||||| |||||    
T  52315220 agcttattttcataagttttccaaaatagc 52315249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 169 - 317
Target Start/End: Original strand, 21731570 - 21731717
Alignment:
Q  169 gggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcata 268  Q
    ||||||||| ||||||| |||||||||| |||||| ||||||||||| ||||||| |||| |  ||||||| |||||||||||| |  ||| | ||||||    
T  21731570 gggcctgtttggattggtttatttgagcatatctactgacataagttttgtgagattgtttgggagaacttatgaaaacagcttat-cacaattttcata 21731668  T
Q  269 agttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    |  | |||||| |||| |||||||| |||||||| ||||| ||||||||    
T  21731669 aacttttttcaacttactttcataaattctccaatatagcttataaaaa 21731717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 190 - 307
Target Start/End: Complemental strand, 1706757 - 1706641
Alignment:
Q  190 tttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttc 289  Q
    |||||| ||||||| ||||||||||| |||||||| ||| || |||| || |||||||||||| ||| ||||||||||||| | ||| || |||||||||    
T  1706757 tttgagtttatctactgacataagttttgtgagacggtttgagagaaattatgaaaacagcttatgg-cattgttcataagctatttccaacttattttc 1706659  T
Q  290 ataagttctccaagatag 307  Q
    ||||| | ||||||||||    
T  1706658 ataagctgtccaagatag 1706641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 169 - 302
Target Start/End: Original strand, 25904137 - 25904269
Alignment:
Q  169 gggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcata 268  Q
    |||||||||  | ||| |||||||||||||||| | |||||||| || |||||||||||| |  ||| ||| |||||||||||| | | |||| ||||||    
T  25904137 gggcctgttttggttgacttatttgagcttatccaatgacataaattttgtgagactgtttgggagagcttatgaaaacagcttat-gccatttttcata 25904235  T
Q  269 agttgttttcagcttattttcataagttctccaa 302  Q
    || | ||||||||||||||| |||||||||||||    
T  25904236 agcttttttcagcttatttttataagttctccaa 25904269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 164 - 317
Target Start/End: Original strand, 26774 - 26925
Alignment:
Q  164 attaagggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgt 263  Q
    ||||| |||||||| ||||||||||||||||||||||| | || |||||| | ||| ||||||||    |||| || |||||||||||| | ||||   |    
T  26774 attaatggcctgtttggattggcttatttgagcttatcaactggcataagctttgttagactgtttccgagaaattatgaaaacagcttat-gacaaatt 26872  T
Q  264 tcataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    ||| ||| | ||||||| ||||||||||||||||||||| ||||| ||||||||    
T  26873 tcacaagct-ttttcagattattttcataagttctccaatatagcttataaaaa 26925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 168 - 317
Target Start/End: Original strand, 35571544 - 35571692
Alignment:
Q  168 agggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcat 267  Q
    |||| ||||| ||||||||||||||||||||||||| |  |||||||| |||| ||  ||| |  ||||||||| |||||||||| |  ||| |||||||    
T  35571544 agggtctgtttggattggcttatttgagcttatctactagcataagttttgtgggatagtttgggagaacttttaaaaacagcttat-tacactgttcat 35571642  T
Q  268 aagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
     || || ||||| |||||||||| |||||||| |||||||| ||| ||||    
T  35571643 gagctggtttcaacttattttcacaagttctctaagatagcttatgaaaa 35571692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 181 - 286
Target Start/End: Original strand, 49939877 - 49939981
Alignment:
Q  181 attggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcag 280  Q
    |||||||||||| |||||||||| |  |||||| | ||||||||| || | |||||||| |||||| ||||| | ||||||||||||||| |||||||||    
T  49939877 attggcttatttaagcttatctactagcataagctttgtgagactatttggaagaacttatgaaaagagcttat-gacattgttcataagctgttttcag 49939975  T
Q  281 cttatt 286  Q
    ||||||    
T  49939976 cttatt 49939981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 208 - 308
Target Start/End: Complemental strand, 49202762 - 49202663
Alignment:
Q  208 cataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcataagttctccaagatag 307  Q
    |||||||| |||||||||||| | |||||||| | ||| ||| || |  ||||||||||||||||||||||| ||||||||||| |||| ||||||||||    
T  49202762 cataagttttgtgagactgtttggaagaacttataaaaccagattatc-acattgttcataagttgttttcaacttattttcattagttatccaagatag 49202664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 186 - 317
Target Start/End: Complemental strand, 22666628 - 22666498
Alignment:
Q  186 cttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttat 285  Q
    ||||| |||||||||||| |||| ||||||  ||||||||||| |   |||||| ||||| ||| || || |||||| |||| |||||||||| ||||||    
T  22666628 cttatctgagcttatctactgacgtaagtttagtgagactgtttgggggaacttatgaaatcagtttatg-acattgatcatgagttgttttctgcttat 22666530  T
Q  286 tttcataagttctccaagatagcctataaaaa 317  Q
    | |||||||||||||| |||||| ||| ||||    
T  22666529 tgtcataagttctccatgatagcttatgaaaa 22666498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 209 - 319
Target Start/End: Complemental strand, 25332891 - 25332781
Alignment:
Q  209 ataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcataagttct-ccaagatag 307  Q
    ||||||| ||||||||| || |  |||||||  ||||||| ||| ||| |||| ||||||||||||||||||||||||||||||||||||   |||||||    
T  25332891 ataagttttgtgagactatttgggagaacttgcgaaaacaacttatgg-cattattcataagttgttttcagcttattttcataagttctgataagatag 25332793  T
Q  308 cctataaaaata 319  Q
    | ||||||||||    
T  25332792 cttataaaaata 25332781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 174 - 317
Target Start/End: Original strand, 39603090 - 39603231
Alignment:
Q  174 tgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttg 273  Q
    |||| |||||||||||||||||||| |||||||  ||||||| |||||||||||| |  |||||||  ||||||||||| || ||| | || ||||| |     
T  39603090 tgtttggattggcttatttgagctt-tctattggtataagttttgtgagactgtttgggagaacttaggaaaacagcttatg-acaatttttataagctt 39603187  T
Q  274 ttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||| |  ||||||||||||||||||||| ||| | ||||||||    
T  39603188 tttttaagttattttcataagttctccaatataccttataaaaa 39603231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 308
Target Start/End: Complemental strand, 22662149 - 22662028
Alignment:
Q  186 cttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttat 285  Q
    ||||| |||||||||||| |||| ||||||  ||||||||||| |   |||||| ||||| ||| || || |||||| |||| |||||||||| ||||||    
T  22662149 cttatctgagcttatctactgacgtaagtttagtgagactgtttgggggaacttatgaaatcagtttatg-acattgatcatgagttgttttctgcttat 22662051  T
Q  286 tttcataagttctccaagatagc 308  Q
    | |||||||||||||| ||||||    
T  22662050 tgtcataagttctccatgatagc 22662028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 170 - 308
Target Start/End: Complemental strand, 55302404 - 55302267
Alignment:
Q  170 ggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataa 269  Q
    |||||||||||||| |||||||| |||||||||| || |||||||| |||||| |||||    | ||||| |  ||||||||| | |||| | ||| |||    
T  55302404 ggcctgttaggatttgcttattttagcttatctaatggcataagttttgtgagcctgttccggaaaacttatagaaacagcttat-gacaattttcgtaa 55302306  T
Q  270 gttgttttcagcttattttcataagttctccaagatagc 308  Q
    | | ||||||||||||||||||||||| ||||| |||||    
T  55302305 gcttttttcagcttattttcataagttttccaacatagc 55302267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 173 - 226
Target Start/End: Complemental strand, 8705093 - 8705040
Alignment:
Q  173 ctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactg 226  Q
    ||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  8705093 ctgtttggattggctcatttgagcttatctattgacataagttttgtgagactg 8705040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 166 - 238
Target Start/End: Complemental strand, 18815182 - 18815110
Alignment:
Q  166 taagggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaact 238  Q
    |||||||||||| ||||||||||||||||||||| ||| |  |||||||| |||||||||||| || ||||||    
T  18815182 taagggcctgtttggattggcttatttgagcttacctactagcataagttttgtgagactgtttgagagaact 18815110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 174 - 298
Target Start/End: Complemental strand, 41336911 - 41336788
Alignment:
Q  174 tgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttg 273  Q
    |||| |||||| |||||||||| ||||||| | ||||||||| |||||||  ||||| ||||||||  ||||||||||| | |||| | |||||||| |     
T  41336911 tgtttggattgacttatttgagtttatctactcacataagttttgtgagatagttaggaagaacttaagaaaacagcttat-gacagttttcataagctt 41336813  T
Q  274 ttttcagcttattttcataagttct 298  Q
    |||||| ||||||||| ||| ||||    
T  41336812 ttttcaacttattttcgtaaattct 41336788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 44798037 - 44797977
Alignment:
Q  168 agggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgtt 228  Q
    |||||||||| ||||||||| |||| |||||||||| ||||||||||| ||||||||||||    
T  44798037 agggcctgtttggattggctgatttaagcttatctactgacataagttttgtgagactgtt 44797977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 172 - 248
Target Start/End: Complemental strand, 55437229 - 55437153
Alignment:
Q  172 cctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaaca 248  Q
    |||||| ||||||||||||||||| ||||||| || |||||||| ||||| | |||| |||||||||| ||||||||    
T  55437229 cctgtttggattggcttatttgagtttatctactgccataagttttgtgaaattgtttgaaagaacttatgaaaaca 55437153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 179 - 317
Target Start/End: Complemental strand, 1408103 - 1407965
Alignment:
Q  179 ggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttg-tttt 277  Q
    |||||||||||||||||||||||||   ||| ||||| ||||||||  || || ||| |||  ||||||||||| | |||||| |||||||| || ||||    
T  1408103 ggattggcttatttgagcttatctacatacacaagttttgtgagacgatttgatagagcttgagaaaacagcttat-gacatttttcataagctgttttt 1408005  T
Q  278 cagcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||||||| ||||||| || ||| ||||||| ||| ||||    
T  1408004 cagcttatcttcataaattttcctagatagcttatgaaaa 1407965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 252
Target Start/End: Original strand, 49940085 - 49940164
Alignment:
Q  173 ctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagctt 252  Q
    ||||| |||||| |||||||||||||| ||  | ||||||||| |||||||||||| || ||||||| ||||||||||||    
T  49940085 ctgtttggattgacttatttgagcttacctgctaacataagttttgtgagactgtttgagagaacttatgaaaacagctt 49940164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 261 - 319
Target Start/End: Original strand, 28300304 - 28300362
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaata 319  Q
    ||||| ||||||||||||| |||||||||||||| ||| ||||||||||||| ||||||    
T  28300304 tgttcttaagttgttttcaacttattttcataagctcttcaagatagcctatgaaaata 28300362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 172 - 317
Target Start/End: Original strand, 40830947 - 40831090
Alignment:
Q  172 cctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttga-aaacagcttctggacattgttcataag 270  Q
    |||||| ||||||||| |||||||||||||||||| |||||||| |||||||||||| | ||||| || ||| |||||||||   ||||   || |||||    
T  40830947 cctgtttggattggctaatttgagcttatctattg-cataagttttgtgagactgttcggaagaaattatgagaaacagctt-acgacaacttttataag 40831044  T
Q  271 ttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
     | |||||| |||| |||||||||||||||||  |||| ||||||||    
T  40831045 cttttttcaactta-tttcataagttctccaatctagcttataaaaa 40831090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 313
Target Start/End: Complemental strand, 25319939 - 25319890
Alignment:
Q  264 tcataagttgttttcagcttattttcataagttctccaagatagcctata 313  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||| ||||    
T  25319939 tcataagttgttttcagctaattttgataagttctccaagatagcatata 25319890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 241 - 306
Target Start/End: Original strand, 55414406 - 55414470
Alignment:
Q  241 tgaaaacagcttctggacattgttcataagttgttttcagcttattttcataagttctccaagata 306  Q
    |||||||||||| || ||||| |||||||| | |||||| ||||||||||||||||||||||||||    
T  55414406 tgaaaacagcttatg-acatttttcataagcttttttcaacttattttcataagttctccaagata 55414470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 197 - 313
Target Start/End: Complemental strand, 2244179 - 2244064
Alignment:
Q  197 ttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcataagtt 296  Q
    ||||||| ||||||||||| | ||| |||||| |  |||| |||| |||||||||| || ||| | |||||||  | |||||| ||||||||||||||||    
T  2244179 ttatctactgacataagttttttgaaactgtttgggagaatttttaaaaacagcttatg-acaatattcataaacttttttcaccttattttcataagtt 2244081  T
Q  297 ctccaagatagcctata 313  Q
    |||||| ||||| ||||    
T  2244080 ctccaatatagcttata 2244064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 217 - 317
Target Start/End: Original strand, 4798529 - 4798627
Alignment:
Q  217 tgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaa 316  Q
    |||||||||||||| |||| ||| || |||| ||||||| |||| || |||||| |||||| ||||||||| |||||| ||||||||||||| ||| |||    
T  4798529 tgtgagactgttaggaagagcttatggaaacggcttctg-acat-gtacataagctgttttgagcttatttgcataagctctccaagatagcttatgaaa 4798626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 17884133 - 17884077
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||||||||||||||||||||| ||||||||||| ||||||| ||||| ||| ||||    
T  17884133 tgttcataagttgttttcagctaattttcataagctctccaatatagcttatgaaaa 17884077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 168 - 288
Target Start/End: Complemental strand, 25571416 - 25571298
Alignment:
Q  168 agggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcat 267  Q
    |||||||||| ||||||||||||||||| ||||||| |||||||||||   ||| ||||||    ||||||| || |||||| || | || | |||||||    
T  25571416 agggcctgtttggattggcttatttgagtttatctactgacataagttacatgaaactgtttaggagaacttatggaaacagtttat-gata-tgttcat 25571319  T
Q  268 aagttgttttcagcttatttt 288  Q
    ||| |||||||||||||||||    
T  25571318 aagctgttttcagcttatttt 25571298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 164 - 220
Target Start/End: Original strand, 42403932 - 42403988
Alignment:
Q  164 attaagggcctgttaggattggcttatttgagcttatctattgacataagttgtgtg 220  Q
    |||||||||||||| |||||| |||||||||||||||| | ||||||||||| ||||    
T  42403932 attaagggcctgtttggattgacttatttgagcttatcaactgacataagttttgtg 42403988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 265 - 317
Target Start/End: Original strand, 53673667 - 53673719
Alignment:
Q  265 cataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    ||||||||||||||||||||||| |||||| ||||||||||||| ||| ||||    
T  53673667 cataagttgttttcagcttatttacataagctctccaagatagcttatgaaaa 53673719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 299
Target Start/End: Complemental strand, 20109677 - 20109612
Alignment:
Q  233 agaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcataagttctc 299  Q
    |||||||||||||||||||| | |||||| |||||||||| ||||| ||| ||||| ||||||||||    
T  20109677 agaacttttgaaaacagcttat-gacatttttcataagtttttttctgctgatttttataagttctc 20109612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 22030347 - 22030230
Alignment:
Q  181 attggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcag 280  Q
    |||| ||||||||||||| ||||||  |||||||| |||||| || || |  ||||||| |||||||||||| | |||| | |||| ||| | || ||||    
T  22030347 attgacttatttgagcttgtctattagcataagttttgtgagcctatttgggagaacttatgaaaacagcttat-gacaattttcaaaagcttttctcag 22030249  T
Q  281 cttattttcataagttctc 299  Q
     ||||||||||||||||||    
T  22030248 gttattttcataagttctc 22030230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 272 - 306
Target Start/End: Original strand, 50004160 - 50004194
Alignment:
Q  272 tgttttcagcttattttcataagttctccaagata 306  Q
    |||||||||||||||||||||||||||||||||||    
T  50004160 tgttttcagcttattttcataagttctccaagata 50004194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 317
Target Start/End: Original strand, 825506 - 825551
Alignment:
Q  272 tgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    ||||||||||||||||||||||||||||||| ||||| ||| ||||    
T  825506 tgttttcagcttattttcataagttctccaaaatagcttatgaaaa 825551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 15173227 - 15173276
Alignment:
Q  179 ggattggcttatttgagcttatctattgacataagttgtgtgagactgtt 228  Q
    |||||| ||||||||| |||||||| ||||||||||| ||||||||||||    
T  15173227 ggattgacttatttgaacttatctactgacataagttttgtgagactgtt 15173276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 317
Target Start/End: Complemental strand, 49803278 - 49803217
Alignment:
Q  256 gacattgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||||||||||| || ||||||||||||||| || |||||||||||||| ||| ||| ||||    
T  49803278 gacattgttcattagctgttttcagcttattgtcttaagttctccaagaaagcttatcaaaa 49803217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 319
Target Start/End: Complemental strand, 51630175 - 51630118
Alignment:
Q  262 gttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaata 319  Q
    |||| |||| |||||||||||||||||||||| |||| ||||||||| ||| ||||||    
T  51630175 gttcgtaagatgttttcagcttattttcataaattcttcaagatagcttatgaaaata 51630118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 266 - 307
Target Start/End: Complemental strand, 53792631 - 53792590
Alignment:
Q  266 ataagttgttttcagcttattttcataagttctccaagatag 307  Q
    ||||||||||||||||||||||||||||  ||||||||||||    
T  53792631 ataagttgttttcagcttattttcataaactctccaagatag 53792590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 233 - 306
Target Start/End: Complemental strand, 55064927 - 55064855
Alignment:
Q  233 agaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcataagttctccaagata 306  Q
    |||||||||||||||| ||| || ||||| ||||  || | |||||| ||||||||||||||||||||||||||    
T  55064927 agaacttttgaaaacaacttatg-acatttttcaatagcttttttcatcttattttcataagttctccaagata 55064855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 300
Target Start/End: Complemental strand, 2703096 - 2703052
Alignment:
Q  257 acattgttcataagttgtttt-cagcttattttcataagttctcc 300  Q
    |||||||||||||| |||||| |||||||||||||||||||||||    
T  2703096 acattgttcataagctgtttttcagcttattttcataagttctcc 2703052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 210
Target Start/End: Original strand, 19394864 - 19394904
Alignment:
Q  170 ggcctgttaggattggcttatttgagcttatctattgacat 210  Q
    ||||| || ||||||||||||||||||||||||||||||||    
T  19394864 ggcctatttggattggcttatttgagcttatctattgacat 19394904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 317
Target Start/End: Complemental strand, 29913086 - 29912957
Alignment:
Q  186 cttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttat 285  Q
    ||||||||||||||| |   | |||||||| || || |||||| |  ||||||| |||||| |||||   |||||| ||| | |||| ||||||||||||    
T  29913086 cttatttgagcttatatgcagccataagttttgcgaaactgtttgggagaacttatgaaaatagcttt--gacatttttccttagttcttttcagcttat 29912989  T
Q  286 tttcataagttctccaagatagcctataaaaa 317  Q
    ||| ||||||| ||||||||||| ||| ||||    
T  29912988 ttttataagttgtccaagatagcttatgaaaa 29912957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 317
Target Start/End: Original strand, 39691064 - 39691204
Alignment:
Q  170 ggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataa 269  Q
    |||||||| | |||| |||||||||||||||||| |  |||||||| |||||||||||| || |||| || ||  ||||||||      |||  || |||    
T  39691064 ggcctgtttgaattgacttatttgagcttatctactagcataagttttgtgagactgtttgagagaatttatgggaacagctt------atttatc-taa 39691156  T
Q  270 gttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    ||| |||||| ||||||||| |||||||| ||| ||||| ||||||||    
T  39691157 gtttttttcaacttattttcgtaagttcttcaatatagcttataaaaa 39691204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 308
Target Start/End: Original strand, 47118919 - 47119017
Alignment:
Q  208 cataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcataagttctccaagatag 307  Q
    ||||| || |||||||||| | | |||||||| |||||||| ||  || |||||||| ||  |||||||||||||||| |||||||||||| ||||||||    
T  47118919 cataaattatgtgagactgcttggaagaacttatgaaaacaactcatg-acattgtt-attggttgttttcagcttatcttcataagttcttcaagatag 47119016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 265 - 308
Target Start/End: Original strand, 5131259 - 5131302
Alignment:
Q  265 cataagttgttttcagcttattttcataagttctccaagatagc 308  Q
    ||||||||||||||||||||||| |||||| |||||| ||||||    
T  5131259 cataagttgttttcagcttatttccataagctctccaggatagc 5131302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 164 - 203
Target Start/End: Complemental strand, 23320012 - 23319973
Alignment:
Q  164 attaagggcctgttaggattggcttatttgagcttatcta 203  Q
    |||||||||||||| ||||||||||||||||| |||||||    
T  23320012 attaagggcctgtttggattggcttatttgagattatcta 23319973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 261 - 292
Target Start/End: Complemental strand, 24747384 - 24747353
Alignment:
Q  261 tgttcataagttgttttcagcttattttcata 292  Q
    ||||||||||||||||||||||||||||||||    
T  24747384 tgttcataagttgttttcagcttattttcata 24747353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 274 - 317
Target Start/End: Complemental strand, 28615575 - 28615532
Alignment:
Q  274 ttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||||| ||||||| |||||| ||||||||||||||||||||||    
T  28615575 ttttcaccttatttccataagctctccaagatagcctataaaaa 28615532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 261 - 304
Target Start/End: Complemental strand, 47146027 - 47145984
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctccaaga 304  Q
    ||||||||||||||||||| |||||||||||||| ||| |||||    
T  47146027 tgttcataagttgttttcaccttattttcataagctcttcaaga 47145984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 210 - 313
Target Start/End: Original strand, 50681044 - 50681146
Alignment:
Q  210 taagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcataagttctccaagatagcc 309  Q
    |||||| |||||||||||| || ||||||| ||||||||| ||   |||| | |||||||| | ||||||  |||||||||||| |||||||| |||||     
T  50681044 taagttttgtgagactgtttgagagaacttatgaaaacag-ttaatgacaattttcataagcttttttcaatttattttcataatttctccaatatagct 50681142  T
Q  310 tata 313  Q
    ||||    
T  50681143 tata 50681146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 261 - 308
Target Start/End: Complemental strand, 53138102 - 53138055
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctccaagatagc 308  Q
    ||||||||||||||||||| ||||||||| |||||| |||| ||||||    
T  53138102 tgttcataagttgttttcaacttattttcctaagttttccaggatagc 53138055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 261 - 308
Target Start/End: Original strand, 55084486 - 55084533
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctccaagatagc 308  Q
    |||||||||| || |||||||||||||||||||| |||| ||||||||    
T  55084486 tgttcataagctggtttcagcttattttcataagctctctaagatagc 55084533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 313
Target Start/End: Original strand, 2592320 - 2592366
Alignment:
Q  267 taagttgttttcagcttattttcataagttctccaagatagcctata 313  Q
    ||||||||||||||||||||| |||||| ||||||| ||||| ||||    
T  2592320 taagttgttttcagcttatttccataagctctccaaaatagcttata 2592366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 299
Target Start/End: Original strand, 8469382 - 8469420
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctc 299  Q
    ||||||||||||||||||||||||||| |||| ||||||    
T  8469382 tgttcataagttgttttcagcttatttccataggttctc 8469420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 317
Target Start/End: Original strand, 17975380 - 17975430
Alignment:
Q  267 taagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    ||||||||||| ||||||||| || ||| ||||||||||||| ||||||||    
T  17975380 taagttgtttttagcttatttccagaagctctccaagatagcttataaaaa 17975430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 306
Target Start/End: Original strand, 18628555 - 18628593
Alignment:
Q  268 aagttgttttcagcttattttcataagttctccaagata 306  Q
    |||||||||||||||||||| |||||| |||||||||||    
T  18628555 aagttgttttcagcttatttccataagctctccaagata 18628593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 213
Target Start/End: Complemental strand, 29376049 - 29376015
Alignment:
Q  179 ggattggcttatttgagcttatctattgacataag 213  Q
    |||||||||||||||| ||||||||||||||||||    
T  29376049 ggattggcttatttgaacttatctattgacataag 29376015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 308
Target Start/End: Original strand, 30377433 - 30377467
Alignment:
Q  274 ttttcagcttattttcataagttctccaagatagc 308  Q
    ||||||||||||||||||||| |||||||||||||    
T  30377433 ttttcagcttattttcataagctctccaagatagc 30377467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 299
Target Start/End: Original strand, 33534178 - 33534212
Alignment:
Q  265 cataagttgttttcagcttattttcataagttctc 299  Q
    |||||||||||||||||||||||||||||| ||||    
T  33534178 cataagttgttttcagcttattttcataagctctc 33534212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 307
Target Start/End: Complemental strand, 3155671 - 3155622
Alignment:
Q  258 cattgttcataagttgttttcagcttattttcataagttctccaagatag 307  Q
    |||||||| |||  |||||||||||||||||||| |||||| ||||||||    
T  3155671 cattgttcgtaaactgttttcagcttattttcattagttcttcaagatag 3155622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 306
Target Start/End: Original strand, 7694015 - 7694060
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctccaagata 306  Q
    ||||||||||||||||||||||||||| |||||  |||||| ||||    
T  7694015 tgttcataagttgttttcagcttatttccataaactctccaggata 7694060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 306
Target Start/End: Complemental strand, 8705018 - 8704981
Alignment:
Q  269 agttgttttcagcttattttcataagttctccaagata 306  Q
    |||| |||||||||||||||||||||||| ||||||||    
T  8705018 agtttttttcagcttattttcataagttccccaagata 8704981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 308
Target Start/End: Complemental strand, 14011293 - 14011252
Alignment:
Q  267 taagttgttttcagcttattttcataagttctccaagatagc 308  Q
    |||| |||||||||||||||| |||||| |||||||||||||    
T  14011293 taagctgttttcagcttatttccataagctctccaagatagc 14011252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 300
Target Start/End: Complemental strand, 21523675 - 21523584
Alignment:
Q  207 acataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcataagttctcc 300  Q
    |||||| || ||||| |||||| | ||||| || |||||||| ||| || ||||| |||||||| | |||||||||||||||||||| ||||||    
T  21523675 acataaattttgtgacactgtttggaagaatttatgaaaacaacttatg-acatttttcataagct-ttttcagcttattttcataacttctcc 21523584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 203
Target Start/End: Original strand, 29126174 - 29126211
Alignment:
Q  166 taagggcctgttaggattggcttatttgagcttatcta 203  Q
    ||||||| |||| |||||||||||||||||||||||||    
T  29126174 taagggcttgtttggattggcttatttgagcttatcta 29126211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 317
Target Start/End: Original strand, 29601024 - 29601069
Alignment:
Q  272 tgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||||||||||||||||||||||||||| | |||||| ||| ||||    
T  29601024 tgttttcagcttattttcataagttctctaggatagcatatgaaaa 29601069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 294
Target Start/End: Complemental strand, 42461316 - 42461283
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataag 294  Q
    ||||||||||||| ||||||||||||||||||||    
T  42461316 tgttcataagttgatttcagcttattttcataag 42461283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 294
Target Start/End: Complemental strand, 43824348 - 43824315
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataag 294  Q
    ||||||||||||||||||||||||||| ||||||    
T  43824348 tgttcataagttgttttcagcttatttccataag 43824315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 252
Target Start/End: Complemental strand, 52172874 - 52172797
Alignment:
Q  176 ttaggattggcttatttgagcttatctattgacataagt-tgtgtgagactgttagaaagaacttttgaaaacagctt 252  Q
    ||||||||||||||||||||||||  || || ||||||| | |||||||||||| |  | ||||| ||||||||||||    
T  52172874 ttaggattggcttatttgagcttacatactggcataagtatttgtgagactgttggggaaaacttatgaaaacagctt 52172797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 318
Target Start/End: Complemental strand, 6364209 - 6364157
Alignment:
Q  266 ataagttgttttcagcttattttcataagttctccaagatagcctataaaaat 318  Q
    ||||| |||||||||||||||||| |||||||||||  ||||| ||| |||||    
T  6364209 ataagctgttttcagcttattttcgtaagttctccattatagcttatgaaaat 6364157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 313
Target Start/End: Complemental strand, 19429770 - 19429722
Alignment:
Q  265 cataagttgttttcagcttattttcataagttctccaagatagcctata 313  Q
    |||||| |||||||||||||||| |||||| |||||| |||||| ||||    
T  19429770 cataagctgttttcagcttatttccataagctctccaggatagcttata 19429722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 299
Target Start/End: Complemental strand, 21879659 - 21879631
Alignment:
Q  271 ttgttttcagcttattttcataagttctc 299  Q
    |||||||||||||||||||||||||||||    
T  21879659 ttgttttcagcttattttcataagttctc 21879631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 213
Target Start/End: Complemental strand, 28615668 - 28615636
Alignment:
Q  181 attggcttatttgagcttatctattgacataag 213  Q
    ||||||||||||||||||||||| |||||||||    
T  28615668 attggcttatttgagcttatctaatgacataag 28615636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 29263435 - 29263379
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    ||||||||||||||||||||||||||| || ||| ||| || |||||| ||| ||||    
T  29263435 tgttcataagttgttttcagcttatttccacaagctctgcaggatagcttatgaaaa 29263379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 317
Target Start/End: Original strand, 30668345 - 30668427
Alignment:
Q  233 agaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    ||||||| |||||||||||| || ||| | |||||||| | ||||||||||| ||||||||  | ||||||||||| ||||||||    
T  30668345 agaacttgtgaaaacagcttatg-acacttttcataagct-ttttcagcttaatttcataaactatccaagatagcttataaaaa 30668427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 214
Target Start/End: Complemental strand, 32724244 - 32724216
Alignment:
Q  186 cttatttgagcttatctattgacataagt 214  Q
    |||||||||||||||||||||||||||||    
T  32724244 cttatttgagcttatctattgacataagt 32724216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 317
Target Start/End: Original strand, 39063664 - 39063708
Alignment:
Q  273 gttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||||||| ||||||||||||| |||||| |||||| ||||||||    
T  39063664 gttttcagtttattttcataagctctccaggatagcttataaaaa 39063708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 40532599 - 40532655
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    ||||||||||||||||||| ||||||||| || | ||||||||| ||| ||| ||||    
T  40532599 tgttcataagttgttttcatcttattttcgtaggctctccaagacagcttatgaaaa 40532655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 302
Target Start/End: Complemental strand, 44138611 - 44138583
Alignment:
Q  274 ttttcagcttattttcataagttctccaa 302  Q
    |||||||||||||||||||||||||||||    
T  44138611 ttttcagcttattttcataagttctccaa 44138583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 317
Target Start/End: Complemental strand, 47800676 - 47800632
Alignment:
Q  273 gttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||||||||||||||||||||| ||| ||||||||| ||| ||||    
T  47800676 gttttcagcttattttcataagctcttcaagatagcttatgaaaa 47800632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 52259696 - 52259640
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||| ||||| | |||||| |||||||||||||| ||||| ||||||| ||||||||    
T  52259696 tgtttataagctattttcaacttattttcataagctctcccagatagcttataaaaa 52259640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 4e-26; HSPs: 116)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 173 - 317
Target Start/End: Original strand, 3233933 - 3234076
Alignment:
Q  173 ctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagtt 272  Q
    ||||| |||||| |||||||||||||||||| || | |||||| ||||||||||||||  ||||||| |||||||| ||| |  ||| | ||||||||||    
T  3233933 ctgtttggattgacttatttgagcttatctagtgccgtaagttttgtgagactgttagggagaacttatgaaaacaacttat-aacagttttcataagtt 3234031  T
Q  273 gttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
     |||||  |||||||||||||||||||||| ||||| ||||||||    
T  3234032 tttttctacttattttcataagttctccaatatagcttataaaaa 3234076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 170 - 319
Target Start/End: Complemental strand, 2295251 - 2295103
Alignment:
Q  170 ggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataa 269  Q
    |||||||| | ||||||||||||||||||||||| || |||||||| |||||||||||| |  ||||||| |||||||||||| | |||| | |||||||    
T  2295251 ggcctgtttgaattggcttatttgagcttatctactggcataagttttgtgagactgtttgggagaacttatgaaaacagcttat-gacaattttcataa 2295153  T
Q  270 gttgttttcagcttattttcataagttctccaagatagcctataaaaata 319  Q
    | | | |||| |||||||||| ||||||||  | ||||| ||||||||||    
T  2295152 gctctattcaacttattttcacaagttctctgatatagcttataaaaata 2295103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 165 - 300
Target Start/End: Original strand, 3887542 - 3887676
Alignment:
Q  165 ttaagggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgtt 264  Q
    ||||||| ||||| |||||| |||||||||||||  ||||||  ||||||| ||| || ||||| | |||||||| |||||||| ||| || ||||||||    
T  3887542 ttaagggtctgtttggattgacttatttgagctttactattggtataagttttgtaaggctgtttggaagaacttatgaaaacatcttatg-acattgtt 3887640  T
Q  265 cataagttgttttcagcttattttcataagttctcc 300  Q
    |||||| |||||| | ||||||||||||||||||||    
T  3887641 cataagctgtttttaacttattttcataagttctcc 3887676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 256 - 308
Target Start/End: Original strand, 38503465 - 38503517
Alignment:
Q  256 gacattgttcataagttgttttcagcttattttcataagttctccaagatagc 308  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38503465 gacattgttcataagttgttttcagcttattttcataagttctccaagatagc 38503517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 170 - 317
Target Start/End: Original strand, 37631474 - 37631620
Alignment:
Q  170 ggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataa 269  Q
    |||||||| ||||||||||||||||||| |||||||  ||||||||  |||| || || |   | ||||| ||||||||||||||| ||| | |||| ||    
T  37631474 ggcctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctg-acaattttcacaa 37631572  T
Q  270 gttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    | | ||||||||||||||||||||||||||||| ||||| || |||||    
T  37631573 gcttttttcagcttattttcataagttctccaatatagcttacaaaaa 37631620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 174 - 320
Target Start/End: Original strand, 27146174 - 27146319
Alignment:
Q  174 tgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttg 273  Q
    |||| |||||| || |||||||||||||||||| |||||||| |||||||||  | | ||||||||  | ||||| ||| || |||||||||||||| ||    
T  27146174 tgtttggattgactgatttgagcttatctattggcataagttttgtgagacttgttggaagaacttaaggaaacaacttatg-acattgttcataagctg 27146272  T
Q  274 ttttcagcttattttcataagttctccaagatagcctataaaaataa 320  Q
    |||||| |||| |||| |||||||| ||||||||  || ||||||||    
T  27146273 ttttcaacttactttcgtaagttcttcaagatagtttacaaaaataa 27146319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 168 - 317
Target Start/End: Original strand, 37842269 - 37842416
Alignment:
Q  168 agggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcat 267  Q
    |||||||| || |||||||||||||||||||||||| ||| |||||||  |||| ||||||    ||||||| |||||||| ||  | |||| |||||||    
T  37842269 agggcctgctaagattggcttatttgagcttatctactgatataagtttggtgacactgttcagtagaacttatgaaaacatctaat-gaca-tgttcat 37842366  T
Q  268 aagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||  |||||||||||||||| ||||||||| ||||||||| ||| ||||    
T  37842367 aagcagttttcagcttatttttataagttcttcaagatagcttatgaaaa 37842416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 179 - 307
Target Start/End: Complemental strand, 1432661 - 1432534
Alignment:
Q  179 ggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttc 278  Q
    ||||||||||||||||||||||| |  ||||||| || |||||||||||| | |||||||| |||||| ||| | | |||||||||||||||   |  |     
T  1432661 ggattggcttatttgagcttatccaccgacataaattttgtgagactgtttggaagaacttatgaaaatagcgtat-gacattgttcataagacatactt 1432563  T
Q  279 agcttattttcataagttctccaagatag 307  Q
    |||||| ||||||||||||||||||||||    
T  1432562 agcttactttcataagttctccaagatag 1432534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 164 - 283
Target Start/End: Complemental strand, 38001756 - 38001639
Alignment:
Q  164 attaagggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgt 263  Q
    |||||||||||| | ||||  ||||||||||| ||||| | ||||||||||| |||||||||||| |  ||||||| |||||||||||| ||  |  |||    
T  38001756 attaagggcctgcttggataagcttatttgagtttatcaactgacataagttttgtgagactgtttgggagaacttatgaaaacagcttatgacc--tgt 38001659  T
Q  264 tcataagttgttttcagctt 283  Q
    ||||||||||||||||||||    
T  38001658 tcataagttgttttcagctt 38001639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 184 - 298
Target Start/End: Complemental strand, 29904892 - 29904779
Alignment:
Q  184 ggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagctt 283  Q
    |||||||||||||||||||| |  |||||||| |||||||||||| || ||||||| | |||||||||| ||| || | |||| ||| | |||||| |||    
T  29904892 ggcttatttgagcttatctacttgcataagttttgtgagactgtttgagagaacttataaaaacagcttatgg-caattttcaaaagcttttttcacctt 29904794  T
Q  284 attttcataagttct 298  Q
    |||||||||||||||    
T  29904793 attttcataagttct 29904779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 173 - 318
Target Start/End: Complemental strand, 7941758 - 7941614
Alignment:
Q  173 ctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagtt 272  Q
    ||||| ||||||| ||||||||| ||||||  | || | |||| |||||||||||| | ||||| || |||||||||||| | ||||||||||  ||| |    
T  7941758 ctgtttggattggtttatttgagtttatctgctaacgtgagttttgtgagactgtttggaagaatttatgaaaacagcttat-gacattgttccgaagct 7941660  T
Q  273 gttttcagcttattttcataagttctccaagatagcctataaaaat 318  Q
     |||||| |||||||||||||||||||| | ||||| ||| |||||    
T  7941659 attttcaacttattttcataagttctccgaaatagcttatgaaaat 7941614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 256 - 317
Target Start/End: Original strand, 27820337 - 27820398
Alignment:
Q  256 gacattgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    ||||||||||||||| | |||||||||||||||||||| |||||||||||||| ||||||||    
T  27820337 gacattgttcataagctattttcagcttattttcataaattctccaagatagcttataaaaa 27820398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 168 - 306
Target Start/End: Complemental strand, 37473564 - 37473423
Alignment:
Q  168 agggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaa----agaacttttgaaaacagcttctggacattgt 263  Q
    |||||||||| ||||||||||||||||| |||||||  | ||||||||  | |||| |||| |      |||||||||||||||| ||| || ||||| |    
T  37473564 agggcctgtttggattggcttatttgagattatctacgggcataagtttcgagagaatgtttgtttgggagaacttttgaaaacaacttatg-acatttt 37473466  T
Q  264 tcataagttgttttcagcttattttcataagttctccaagata 306  Q
    ||||||| | ||| |||||||||||||||||||||||||||||    
T  37473465 tcataagctttttccagcttattttcataagttctccaagata 37473423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 179 - 303
Target Start/End: Complemental strand, 2778037 - 2777915
Alignment:
Q  179 ggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttc 278  Q
    |||||||||||||| ||||||||||||  |||||||| ||||||||||||    ||||||| ||||| || ||| | |||  | ||||||||  ||||||    
T  2778037 ggattggcttattttagcttatctatttgcataagttttgtgagactgtttaggagaacttatgaaaccaacttat-gac-gtattcataagccgttttc 2777940  T
Q  279 agcttattttcataagttctccaag 303  Q
    |||||||||||||||||||||||||    
T  2777939 agcttattttcataagttctccaag 2777915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 256 - 316
Target Start/End: Complemental strand, 15784399 - 15784339
Alignment:
Q  256 gacattgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaa 316  Q
    ||||||||||| |||||||||| |||||||||||| ||||||||||||||||| |||||||    
T  15784399 gacattgttcacaagttgtttttagcttattttcacaagttctccaagatagcttataaaa 15784339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 186 - 306
Target Start/End: Original strand, 36514607 - 36514726
Alignment:
Q  186 cttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttat 285  Q
    |||||||||| ||||||| || |||||||| | ||||||||||||  ||||||| |||||| | ||| | ||||||||| | ||| |||||||||||| |    
T  36514607 cttatttgagtttatctactgccataagttttttgagactgttagggagaacttatgaaaataacttat-gacattgtttagaagctgttttcagctttt 36514705  T
Q  286 tttcataagttctccaagata 306  Q
    ||||||||||  |||||||||    
T  36514706 tttcataagtaatccaagata 36514726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 170 - 317
Target Start/End: Original strand, 14576569 - 14576714
Alignment:
Q  170 ggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataa 269  Q
    |||||||| ||||||||||||||||||||||||| || | ||| || ||||  |||||| |  | ||||| |||||||||||| | |||| | |||| ||    
T  14576569 ggcctgtttggattggcttatttgagcttatctactggcttaaattttgtggcactgtttgggacaacttgtgaaaacagcttat-gacaattttcaaaa 14576667  T
Q  270 gttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    | | ||||||||||||||||| |||||||| || ||||| ||||||||    
T  14576668 gcttttttcagcttattttca-aagttctctaatatagcttataaaaa 14576714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 263 - 317
Target Start/End: Original strand, 7137005 - 7137059
Alignment:
Q  263 ttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||    
T  7137005 ttcataagttattttcagcttattttcataagttctccaagatagcttatgaaaa 7137059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 306
Target Start/End: Original strand, 27145689 - 27145785
Alignment:
Q  208 cataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcataagttctccaagata 306  Q
    |||||||| ||||||||| || | ||||||||  ||||||  ||| || |||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  27145689 cataagttttgtgagactttttggaagaacttaagaaaacgacttatg-acattgttcataagtt-ttttcagcttattttcataagttcttcaagata 27145785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 263 - 317
Target Start/End: Complemental strand, 34290299 - 34290245
Alignment:
Q  263 ttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||    
T  34290299 ttcataagttgttttcagcttattttcataagttcttcaagatagcttatgaaaa 34290245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 179 - 319
Target Start/End: Complemental strand, 5721071 - 5720932
Alignment:
Q  179 ggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagt-tgtttt 277  Q
    ||||||||||||||||||||| ||| |  |||||||| |||  ||||||| |  ||||||| |||||||||||| | |||| | ||||||||| | ||||    
T  5721071 ggattggcttatttgagcttaactacttgcataagttttgttggactgtttgggagaacttatgaaaacagcttat-gacaat-ttcataagtatttttt 5720974  T
Q  278 cagcttattttcataagttctccaagatagcctataaaaata 319  Q
    ||||| ||||||||| |||||| || ||||| ||||||||||    
T  5720973 cagctgattttcatatgttctctaatatagcttataaaaata 5720932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 188 - 309
Target Start/End: Complemental strand, 7069553 - 7069433
Alignment:
Q  188 tatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattt 287  Q
    |||||||||||||||| | | || |||| ||| ||||| || | |||||||| | |||||||||| ||  ||||||||||||||| ||||||  ||||||    
T  7069553 tatttgagcttatctactaaaattagttttgtaagactatttggaagaacttatcaaaacagcttatgc-cattgttcataagtttttttcaaattattt 7069455  T
Q  288 tcataagttctccaagatagcc 309  Q
    |||  |||||||||||||||||    
T  7069454 tcactagttctccaagatagcc 7069433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 165 - 317
Target Start/End: Original strand, 10199318 - 10199469
Alignment:
Q  165 ttaagggcctgttaggattggcttatttgagcttatctattgacataagttgt-gtgagactgttagaaagaacttttgaaaacagcttctggacattgt 263  Q
    ||||||||||| | |||||| |||||||||||||||||| | |||||||   | |||| ||| || |  ||||||  |||||| ||||| || |||| ||    
T  10199318 ttaagggcctggttggattgacttatttgagcttatctactaacataagcacttgtgacactatttgggagaactcatgaaaatagcttatg-acat-gt 10199415  T
Q  264 tcataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    ||||||||||||||||||||||||||||||| |||| || ||||| ||| ||||    
T  10199416 tcataagttgttttcagcttattttcataagctctctaaaatagcttatgaaaa 10199469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 261 - 318
Target Start/End: Complemental strand, 15361105 - 15361048
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaat 318  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||||| || |||||    
T  15361105 tgttcataagttgttttcagcttattttcataagctctccaggatagccaatgaaaat 15361048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 179 - 307
Target Start/End: Original strand, 41195120 - 41195244
Alignment:
Q  179 ggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttc 278  Q
    |||||||| ||||||||||| |||| || |||||||||||  | |||||| |  |||||||||  ||| ||||| || ||||| || ||||| | |||||    
T  41195120 ggattggcgtatttgagcttgtctactggcataagttgtg--atactgtttgggagaacttttataaatagcttatg-acatt-ttaataagcttttttc 41195215  T
Q  279 agcttattttcataagttctccaagatag 307  Q
    |||||||||||||||||||||||||||||    
T  41195216 agcttattttcataagttctccaagatag 41195244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 180 - 317
Target Start/End: Complemental strand, 49938892 - 49938756
Alignment:
Q  180 gattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttca 279  Q
    ||||| |||||||||| |||| |  || |||||||| ||||||| |||| |  ||||||| |||||||||||| || ||| | |||| ||| | ||||||    
T  49938892 gattgacttatttgagtttatatcgtggcataagttttgtgagattgtttgggagaacttatgaaaacagcttatg-acaattttcaaaagcttttttca 49938794  T
Q  280 gcttattttcataagttctccaagatagcctataaaaa 317  Q
     ||||||||||||||||||| || ||||| ||||||||    
T  49938793 acttattttcataagttctctaatatagcttataaaaa 49938756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 171 - 302
Target Start/End: Complemental strand, 473317 - 473188
Alignment:
Q  171 gcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataag 270  Q
    |||||||  ||||||||||||||||| |||||| || |||||||| ||||| ||  || |  ||||||| |||||| ||||| |  ||| | ||||||||    
T  473317 gcctgtttagattggcttatttgagcctatctactggcataagttctgtgaaacattttgggagaacttatgaaaaaagcttat--acaattttcataag 473220  T
Q  271 ttgttttcagcttattttcataagttctccaa 302  Q
     | |||||| ||||||||||||||||||||||    
T  473219 cttttttcaacttattttcataagttctccaa 473188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 261 - 305
Target Start/End: Original strand, 5886999 - 5887043
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctccaagat 305  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  5886999 tgttcataagttgttttcagcttattttcgtaagttctccaagat 5887043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 317
Target Start/End: Complemental strand, 6102297 - 6102163
Alignment:
Q  181 attggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcag 280  Q
    |||| |||||||||| |||||||  | ||||| || ||||||| |||| |  |||||| | ||||||||||| || | ||||||||||| ||||||||||    
T  6102297 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaactat-gaaaacagcttatg-atattgttcataaattgttttcag 6102200  T
Q  281 cttattttcataagttctccaagatagcctataaaaa 317  Q
    ||||||| ||||| |||||| ||||||| ||| ||||    
T  6102199 cttatttccataaattctcccagatagcttatgaaaa 6102163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 257 - 317
Target Start/End: Complemental strand, 45975759 - 45975699
Alignment:
Q  257 acattgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    ||||| |||||||| |||||||||||||||||||||| |||||||||||||| ||| ||||    
T  45975759 acattattcataagctgttttcagcttattttcataaattctccaagatagcttatgaaaa 45975699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 257 - 317
Target Start/End: Original strand, 51695496 - 51695556
Alignment:
Q  257 acattgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||||||||||||| | |||||||||||||||||||| |||||||||||||| ||| ||||    
T  51695496 acattgttcataagctattttcagcttattttcataaattctccaagatagcttatgaaaa 51695556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 225
Target Start/End: Complemental strand, 2295350 - 2295291
Alignment:
Q  166 taagggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagact 225  Q
    |||||||||||| ||||||||||||||||||||||||| |||| |||||| | |||||||    
T  2295350 taagggcctgtttggattggcttatttgagcttatctactgacttaagttttctgagact 2295291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 266 - 317
Target Start/End: Original strand, 12564509 - 12564560
Alignment:
Q  266 ataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||| ||||    
T  12564509 ataagttgttttcagcttatttccataagttctccaagatagcttatgaaaa 12564560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 168 - 291
Target Start/End: Complemental strand, 27976758 - 27976639
Alignment:
Q  168 agggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcat 267  Q
    ||||| |||| ||||||||||||||||||| ||  | ||||||||||| ||| |||||||| | || |||||||||||| ||||| || ||||| |||||    
T  27976758 agggcttgtttggattggcttatttgagct-ata-actgacataagttttgttagactgtttggaa-aacttttgaaaatagcttatg-acatttttcat 27976663  T
Q  268 aagttgttttcagcttattttcat 291  Q
    ||| | ||||||||||||||||||    
T  27976662 aagcttttttcagcttattttcat 27976639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 306
Target Start/End: Original strand, 38116002 - 38116128
Alignment:
Q  180 gattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaactttt-gaaaacagcttctggacattgttcataagttgttttc 278  Q
    ||||| |||||||||||||||||| |||| |||||| |||||||| |||    ||||   |  ||||| ||||| || ||||||||| |||||||||| |    
T  38116002 gattgacttatttgagcttatctactgacgtaagttttgtgagacggttttggagaaaaataagaaaatagcttatg-acattgttcctaagttgtttcc 38116100  T
Q  279 agcttattttcataagttctccaagata 306  Q
    |||||| |||||||||||||||||||||    
T  38116101 agcttactttcataagttctccaagata 38116128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 261 - 308
Target Start/End: Original strand, 46252687 - 46252734
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctccaagatagc 308  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||||    
T  46252687 tgttcataagttgttttcaggttattttcataagctctccaagatagc 46252734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 174 - 307
Target Start/End: Complemental strand, 6292643 - 6292512
Alignment:
Q  174 tgttaggattggcttatttgagcttatctattgacataagttgtgt-gagactgttagaaagaacttttgaaaacagcttctggacattgttcataagtt 272  Q
    |||| |||||| |||||||||||||||||| |||||||||   | | |||| |||| |  |||| |||| |||||||||| || |||| ||||||||| |    
T  6292643 tgtttggattgacttatttgagcttatctactgacataagcacttttgagattgtttgggagaattttt-aaaacagcttatg-acat-gttcataagct 6292547  T
Q  273 gttttcagcttattttcataagttctccaagatag 307  Q
    |||||||||||||||||||||| ||||||| ||||    
T  6292546 gttttcagcttattttcataagctctccaaaatag 6292512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 179 - 317
Target Start/End: Complemental strand, 13810144 - 13810007
Alignment:
Q  179 ggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttc 278  Q
    ||||||||||||||| ||||||||| |||| |||||| ||||||||| ||  | ||||||| |||| |||| || | |||| | |||| ||||| || |     
T  13810144 ggattggcttatttgtgcttatctactgacgtaagttttgtgagactcttttagagaacttatgaatacagtttat-gacaattttcaaaagtttttctt 13810046  T
Q  279 agcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||||||||||| |||||||| || ||||  ||||||||    
T  13810045 agcttattttcacaagttctctaatatagtttataaaaa 13810007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 261 - 319
Target Start/End: Original strand, 14629971 - 14630029
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaata 319  Q
    ||||||||||||||||||||||||||| |||||  ||||||||||||| ||| ||||||    
T  14629971 tgttcataagttgttttcagcttatttccataaagtctccaagatagcttatgaaaata 14630029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 170 - 314
Target Start/End: Original strand, 43230687 - 43230828
Alignment:
Q  170 ggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataa 269  Q
    |||||||| |||||||| ||||||||||| |||| || |||||||| |  |||| ||||    |||| || ||||||||||||   |||| | || ||||    
T  43230687 ggcctgtttggattggcatatttgagcttctctactggcataagttttacgagattgtttaggagaatttatgaaaacagctt---gacagtttttataa 43230783  T
Q  270 gttgttttcagcttattttcataagttctccaagatagcctataa 314  Q
    | | |||||| ||||||||||| |||||||||| |||||||||||    
T  43230784 gcttttttcaacttattttcattagttctccaatatagcctataa 43230828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 319
Target Start/End: Complemental strand, 5741752 - 5741613
Alignment:
Q  179 ggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagt-tgtttt 277  Q
    ||||||||||||||||||||| ||| |  |||||||| |||   |||||| |  ||||||| |||||||| ||| || ||| | ||||||||| | ||||    
T  5741752 ggattggcttatttgagcttaactacttgcataagttttgttgaactgtttgggagaacttatgaaaacaacttatg-acaat-ttcataagtatttttt 5741655  T
Q  278 cagcttattttcataagttctccaagatagcctataaaaata 319  Q
    ||||| |||||||||||||||| || ||||| ||||||||||    
T  5741654 cagctgattttcataagttctctaatatagcttataaaaata 5741613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 217
Target Start/End: Complemental strand, 41505831 - 41505782
Alignment:
Q  168 agggcctgttaggattggcttatttgagcttatctattgacataagttgt 217  Q
    ||||| |||| ||||||||||||||||||||||||| |||||||||||||    
T  41505831 agggcttgtttggattggcttatttgagcttatctactgacataagttgt 41505782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 296
Target Start/End: Original strand, 47498756 - 47498879
Alignment:
Q  171 gcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataag 270  Q
    ||||||| |||||| |||||| |||||||| || || | |||||| | || || |||| |  ||||||| |||||| ||||| || | ||||||||||||    
T  47498756 gcctgtttggattgacttattcgagcttatgtagtggc-taagttttttgtgattgtttgggagaacttatgaaaatagcttatg-atattgttcataag 47498853  T
Q  271 ttgttttcagcttattttcataagtt 296  Q
    ||||||| ||||||||||||||||||    
T  47498854 ttgtttttagcttattttcataagtt 47498879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 14385707 - 14385763
Alignment:
Q  169 gggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagact 225  Q
    ||||||||| ||||||||||||||||||||||||| || ||||||||  ||||||||    
T  14385707 gggcctgttcggattggcttatttgagcttatctactggcataagtttcgtgagact 14385763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 265 - 317
Target Start/End: Original strand, 26779934 - 26779986
Alignment:
Q  265 cataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    ||||||||||||||| |||||||||||||||||| ||||||||| ||| ||||    
T  26779934 cataagttgttttcaacttattttcataagttcttcaagatagcttatgaaaa 26779986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 265 - 317
Target Start/End: Complemental strand, 27140539 - 27140487
Alignment:
Q  265 cataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    ||||||||||||||||||||||| |||||| |||||| |||||| ||||||||    
T  27140539 cataagttgttttcagcttatttgcataagctctccatgatagcttataaaaa 27140487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 265 - 313
Target Start/End: Original strand, 28689461 - 28689509
Alignment:
Q  265 cataagttgttttcagcttattttcataagttctccaagatagcctata 313  Q
    |||||||||||||||||||||||||||||| | ||||||||||| ||||    
T  28689461 cataagttgttttcagcttattttcataagctttccaagatagcttata 28689509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 168 - 252
Target Start/End: Complemental strand, 38247484 - 38247400
Alignment:
Q  168 agggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagctt 252  Q
    |||||||||| ||||||| |||||||| |||||||| || |||||||| ||||  |||||| |  ||||||| ||||||||||||    
T  38247484 agggcctgtttggattgggttatttgaacttatctactggcataagttttgtgtcactgtttgggagaacttatgaaaacagctt 38247400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 292
Target Start/End: Complemental strand, 11941406 - 11941296
Alignment:
Q  181 attggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcag 280  Q
    |||| ||||||||| ||| |||| |  |||| ||| |||||||||||| |  ||| ||| |||||| ||||| |  |||||||||||||| |||||||||    
T  11941406 attgacttatttgaacttttctactagcatatgttatgtgagactgtttgggagagcttatgaaaatagcttata-acattgttcataagctgttttcag 11941308  T
Q  281 cttattttcata 292  Q
    ||||||||||||    
T  11941307 cttattttcata 11941296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 261 - 304
Target Start/End: Original strand, 31517745 - 31517788
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctccaaga 304  Q
    |||||||||| ||||||||||||||||||||||| |||||||||    
T  31517745 tgttcataagctgttttcagcttattttcataagctctccaaga 31517788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 299
Target Start/End: Complemental strand, 33186462 - 33186332
Alignment:
Q  169 gggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgt-tagaaagaacttttgaaaacagcttctggacattgttcat 267  Q
    ||||||||| ||||||||||||||||| |||||  ||| |||||||| ||||||||||| |||  ||||||| ||||||| | || ||   ||| ||||     
T  33186462 gggcctgtttggattggcttatttgagtttatccgttggcataagttttgtgagactgtctag-gagaacttatgaaaactggttatgacaatttttcaa 33186364  T
Q  268 aagttgttttcagcttattttcataagttctc 299  Q
    ||| | ||||||||||||||  ||||||||||    
T  33186363 aagcttttttcagcttatttatataagttctc 33186332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 306
Target Start/End: Original strand, 38018304 - 38018414
Alignment:
Q  195 gcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcataag 294  Q
    ||||||||| || |||||||| |||||||||| | |  | ||||| ||||| ||| ||  ||||||||||||| || | |||||||||||||||||| |     
T  38018304 gcttatctactggcataagttttgtgagactggttgggaaaacttatgaaagcagatta-ggacattgttcattaggtattttcagcttattttcatgaa 38018402  T
Q  295 ttctccaagata 306  Q
    ||||||||||||    
T  38018403 ttctccaagata 38018414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 246
Target Start/End: Original strand, 39976122 - 39976201
Alignment:
Q  167 aagggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaa 246  Q
    ||||||| ||| ||| || |||||||||| ||||||| ||||||||||| ||||| |||||| || ||||||| ||||||    
T  39976122 aagggccagtttggactgacttatttgagattatctactgacataagttttgtgaaactgtttgagagaacttatgaaaa 39976201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 307
Target Start/End: Complemental strand, 8016322 - 8016276
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctccaagatag 307  Q
    ||||||||| ||||||||||||||||||| |||| ||||||||||||    
T  8016322 tgttcataacttgttttcagcttattttcctaagctctccaagatag 8016276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 228
Target Start/End: Original strand, 33204325 - 33204367
Alignment:
Q  186 cttatttgagcttatctattgacataagttgtgtgagactgtt 228  Q
    |||||||||||||||||| ||||||||||| ||||||||||||    
T  33204325 cttatttgagcttatctactgacataagttttgtgagactgtt 33204367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 252
Target Start/End: Original strand, 37617384 - 37617462
Alignment:
Q  174 tgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagctt 252  Q
    |||| |||||| |||||||||| |||||||||| | |||||| |||||||||||| |  |||| || ||||||||||||    
T  37617384 tgtttggattgacttatttgagtttatctattgccgtaagttttgtgagactgtttgcgagaatttatgaaaacagctt 37617462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 262 - 308
Target Start/End: Original strand, 47885039 - 47885085
Alignment:
Q  262 gttcataagttgttttcagcttattttcataagttctccaagatagc 308  Q
    |||||||||||||||||||||||||| ||||||||||| | ||||||    
T  47885039 gttcataagttgttttcagcttatttccataagttctctatgatagc 47885085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 248
Target Start/End: Original strand, 50644174 - 50644248
Alignment:
Q  174 tgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaaca 248  Q
    |||| |||||| |||||||||||||||||| | ||||| ||| |||||||||||| |  ||||||| ||||||||    
T  50644174 tgtttggattgacttatttgagcttatctactaacatatgttttgtgagactgtttgggagaacttatgaaaaca 50644248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 307
Target Start/End: Complemental strand, 2294979 - 2294930
Alignment:
Q  258 cattgttcataagttgttttcagcttattttcataagttctccaagatag 307  Q
    |||||| |||||| |||||||| ||||||||| |||||||||||||||||    
T  2294979 cattgtccataagctgttttcaccttattttcgtaagttctccaagatag 2294930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 186 - 298
Target Start/End: Complemental strand, 6557111 - 6556999
Alignment:
Q  186 cttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataag-ttgttttcagctta 284  Q
    ||||||||| |||||||| | ||||||||| ||||||||| || || ||||||| |||||| ||||| || ||| | |||| ||| || |||| ||||||    
T  6557111 cttatttgaacttatctactaacataagttttgtgagactatttgagagaacttatgaaaatagcttatg-acagttttcaaaaggttttttttagctta 6557013  T
Q  285 ttttcataagttct 298  Q
    || |||||||||||    
T  6557012 ttgtcataagttct 6556999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 208 - 317
Target Start/End: Complemental strand, 14443565 - 14443458
Alignment:
Q  208 cataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcataagttctccaagatag 307  Q
    ||||| || ||||||||| |  ||||||| || |||||||||||| |  ||| ||||| ||||||||||||| ||||||||||||| ||||||||  |||    
T  14443565 cataaattttgtgagactatatgaaagaatttatgaaaacagctt-ttaaca-tgttcgtaagttgttttcaccttattttcataaattctccaatgtag 14443468  T
Q  308 cctataaaaa 317  Q
    | ||||||||    
T  14443467 cttataaaaa 14443458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 166 - 223
Target Start/End: Complemental strand, 15477712 - 15477655
Alignment:
Q  166 taagggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgaga 223  Q
    |||||||||||| ||||||||||||| ||||||||||| |  |||||||| |||||||    
T  15477712 taagggcctgtttggattggcttattagagcttatctacttgcataagttttgtgaga 15477655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 166 - 223
Target Start/End: Complemental strand, 34952361 - 34952304
Alignment:
Q  166 taagggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgaga 223  Q
    |||||| ||||| ||||||||||||||||||||||||||||  ||||| | |||||||    
T  34952361 taagggtctgtttggattggcttatttgagcttatctattgggataagatttgtgaga 34952304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 1232921 - 1232957
Alignment:
Q  272 tgttttcagcttattttcataagttctccaagatagc 308  Q
    |||||||||||||||||||||| ||||||||||||||    
T  1232921 tgttttcagcttattttcataaattctccaagatagc 1232957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 317
Target Start/End: Complemental strand, 3224484 - 3224432
Alignment:
Q  265 cataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    ||||||||||| ||||||||||||||||||||||| |  ||||| ||||||||    
T  3224484 cataagttgttctcagcttattttcataagttctctagaatagcttataaaaa 3224432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 317
Target Start/End: Original strand, 4700079 - 4700127
Alignment:
Q  269 agttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||||||||||||||||||||||||| |||||| |||||  ||||||||    
T  4700079 agttgttttcagcttattttcataagctctccaggatagtttataaaaa 4700127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 7069371 - 7069319
Alignment:
Q  256 gacattgttcataagttgttttcagcttattttcataagttctccaagatagc 308  Q
    |||||||||||||| ||||||| |  | |||||||||||||||||||||||||    
T  7069371 gacattgttcataatttgtttttaattcattttcataagttctccaagatagc 7069319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 308
Target Start/End: Complemental strand, 7472365 - 7472329
Alignment:
Q  272 tgttttcagcttattttcataagttctccaagatagc 308  Q
    ||||||||||||||||||||||| |||||||||||||    
T  7472365 tgttttcagcttattttcataagctctccaagatagc 7472329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 317
Target Start/End: Complemental strand, 10744392 - 10744310
Alignment:
Q  233 agaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    ||||||| |||||||||||| ||| || |||||||||| |||||||| |||||||| |||||||||| |||| ||| ||| ||||    
T  10744392 agaacttgtgaaaacagcttatgg-ca-tgttcataagctgttttcatcttatttttataagttctctaagacagcttatgaaaa 10744310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 308
Target Start/End: Complemental strand, 10809399 - 10809363
Alignment:
Q  272 tgttttcagcttattttcataagttctccaagatagc 308  Q
    ||||||||||||||||||||||||||||||| |||||    
T  10809399 tgttttcagcttattttcataagttctccaatatagc 10809363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 25479646 - 25479590
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    ||||||| |||||||||||||||||||||||||| |||| | |||||| ||| ||||    
T  25479646 tgttcattagttgttttcagcttattttcataagctctctaggatagcttatgaaaa 25479590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 313
Target Start/End: Original strand, 27820197 - 27820253
Alignment:
Q  257 acattgttcataagttgttttcagcttattttcataagttctccaagatagcctata 313  Q
    |||||||||||||| | |||||||||||||||||||| ||||  |||||||| ||||    
T  27820197 acattgttcataagctattttcagcttattttcataaattctttaagatagcttata 27820253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 301
Target Start/End: Complemental strand, 35179200 - 35179164
Alignment:
Q  265 cataagttgttttcagcttattttcataagttctcca 301  Q
    |||||| ||||||||||||||||||||||||||||||    
T  35179200 cataagctgttttcagcttattttcataagttctcca 35179164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 299
Target Start/End: Original strand, 38882915 - 38882955
Alignment:
Q  259 attgttcataagttgttttcagcttattttcataagttctc 299  Q
    |||||||||||| |||||||| |||||||||||||||||||    
T  38882915 attgttcataaggtgttttcaacttattttcataagttctc 38882955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 314
Target Start/End: Complemental strand, 51190900 - 51190860
Alignment:
Q  274 ttttcagcttattttcataagttctccaagatagcctataa 314  Q
    ||||||||||||||||||||||||| ||||||||| |||||    
T  51190900 ttttcagcttattttcataagttcttcaagatagcttataa 51190860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 278 - 317
Target Start/End: Original strand, 9572093 - 9572132
Alignment:
Q  278 cagcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||||||||||||||||||||||| |||||| ||||||||    
T  9572093 cagcttattttcataagttctccatgatagcatataaaaa 9572132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 256 - 307
Target Start/End: Original strand, 15687346 - 15687397
Alignment:
Q  256 gacattgttcataagttgttttcagcttattttcataagttctccaagatag 307  Q
    ||||||| | ||||||| ||||||||| ||||| ||||||||||||||||||    
T  15687346 gacattgcttataagttattttcagctcatttttataagttctccaagatag 15687397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 261 - 308
Target Start/End: Original strand, 35058437 - 35058484
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctccaagatagc 308  Q
    ||||| |||| ||||||||||||| |||| ||||||||||||||||||    
T  35058437 tgttcgtaagctgttttcagcttactttcgtaagttctccaagatagc 35058484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 261 - 308
Target Start/End: Original strand, 37593689 - 37593736
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctccaagatagc 308  Q
    |||||||||| ||||||||||||||||||||||| ||| ||| |||||    
T  37593689 tgttcataagctgttttcagcttattttcataagctcttcaaaatagc 37593736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 216 - 299
Target Start/End: Complemental strand, 50725315 - 50725233
Alignment:
Q  216 gtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcataagttctc 299  Q
    ||||||||||||| || ||||||| ||||| |||||| | ||||||||  |||| ||||||||   ||||||||||||||||||    
T  50725315 gtgtgagactgtttgacagaacttatgaaagcagcttat-gacattgtctataaattgttttcccgttattttcataagttctc 50725233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 298
Target Start/End: Complemental strand, 489334 - 489218
Alignment:
Q  181 attggcttatttgagcttatctattgacataagttgtgtgagactgtt-agaaagaacttttgaaaacagcttctggacattgttcataagttgttttca 279  Q
    |||| ||||||| || ||||||| | |||||| || ||| |||||||| ||||| ||||| |||||||| ||| || |||||| |||||||  || ||||    
T  489334 attgacttatttcagattatctactaacataatttttgtaagactgtttagaaa-aacttatgaaaacaacttatg-acattgctcataagaagtattca 489237  T
Q  280 gcttattttcataagttct 298  Q
    ||||||||||| |||||||    
T  489236 gcttattttcacaagttct 489218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 319
Target Start/End: Original strand, 4768838 - 4768892
Alignment:
Q  265 cataagttgttttcagcttattttcataagttctccaagatagcctataaaaata 319  Q
    ||||| ||||||||||||||||| ||||| |||||||||||| | ||| ||||||    
T  4768838 cataacttgttttcagcttatttccataaattctccaagatatcatatgaaaata 4768892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 211
Target Start/End: Complemental strand, 5047290 - 5047260
Alignment:
Q  181 attggcttatttgagcttatctattgacata 211  Q
    |||||||||||||||||||||||||||||||    
T  5047290 attggcttatttgagcttatctattgacata 5047260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 252
Target Start/End: Original strand, 10233579 - 10233645
Alignment:
Q  186 cttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagctt 252  Q
    |||||| ||||||||| | ||||||| ||| ||| |||||||| | |||||||| ||||||||||||    
T  10233579 cttattagagcttatccactgacatatgttttgtaagactgtttggaagaacttatgaaaacagctt 10233645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 302
Target Start/End: Complemental strand, 10799516 - 10799486
Alignment:
Q  272 tgttttcagcttattttcataagttctccaa 302  Q
    |||||||||||||||||||||||||||||||    
T  10799516 tgttttcagcttattttcataagttctccaa 10799486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 252
Target Start/End: Original strand, 34795357 - 34795443
Alignment:
Q  166 taagggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagctt 252  Q
    |||||||||||| ||||||| |||||||||||   ||| || ||||| || || ||||||||| |  ||||||| ||||||||||||    
T  34795357 taagggcctgtttggattgggttatttgagctagcctactggcataaattttgcgagactgtttgggagaacttatgaaaacagctt 34795443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 308
Target Start/End: Original strand, 35590898 - 35590944
Alignment:
Q  262 gttcataagttgttttcagcttattttcataagttctccaagatagc 308  Q
    |||||| ||||||||||||||||||| |||||| |||||| ||||||    
T  35590898 gttcatcagttgttttcagcttatttccataagctctccatgatagc 35590944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 317
Target Start/End: Complemental strand, 42174918 - 42174864
Alignment:
Q  263 ttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||||||| |||||| | |||||||||||||||||||||| ||| | ||||||||    
T  42174918 ttcataagctgtttttaacttattttcataagttctccaatataacttataaaaa 42174864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 212
Target Start/End: Complemental strand, 43420417 - 43420371
Alignment:
Q  166 taagggcctgttaggattggcttatttgagcttatctattgacataa 212  Q
    |||||| ||||||||||| |||||||||||||||||||  |||||||    
T  43420417 taagggtctgttaggattagcttatttgagcttatctacagacataa 43420371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 294
Target Start/End: Complemental strand, 47877171 - 47877141
Alignment:
Q  264 tcataagttgttttcagcttattttcataag 294  Q
    |||||||||||||||||||||||||||||||    
T  47877171 tcataagttgttttcagcttattttcataag 47877141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 307
Target Start/End: Original strand, 7218080 - 7218125
Alignment:
Q  262 gttcataagttgttttcagcttattttcataagttctccaagatag 307  Q
    ||||| ||| |||||||| ||||||||||||||||||||| |||||    
T  7218080 gttcacaagctgttttcaacttattttcataagttctccaggatag 7218125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 306
Target Start/End: Original strand, 17577769 - 17577818
Alignment:
Q  257 acattgttcataagttgttttcagcttattttcataagttctccaagata 306  Q
    |||||||||||||| |||||| ||||||||||  |||||||| |||||||    
T  17577769 acattgttcataagctgttttaagcttatttttgtaagttcttcaagata 17577818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 320
Target Start/End: Complemental strand, 17778753 - 17778712
Alignment:
Q  279 agcttattttcataagttctccaagatagcctataaaaataa 320  Q
    ||||||||||||||| |||||||||||||| |||| ||||||    
T  17778753 agcttattttcataaattctccaagatagcttatagaaataa 17778712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 19389967 - 19389910
Alignment:
Q  261 tgttcataagttgttttc-agcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||||||||||||||||  |||||||||||| ||| ||||||||||||| ||| ||||    
T  19389967 tgttcataagttgttttttagcttattttcacaagctctccaagatagcttatgaaaa 19389910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 317
Target Start/End: Original strand, 24915051 - 24915112
Alignment:
Q  256 gacattgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||||| |||||||| | |||||| |||||||||| ||||||||||||| ||| ||| ||||    
T  24915051 gacatttttcataagcttttttcaacttattttcacaagttctccaagacagcttatgaaaa 24915112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 213
Target Start/End: Original strand, 28837278 - 28837311
Alignment:
Q  180 gattggcttatttgagcttatctattgacataag 213  Q
    |||||||||||||||||||||||| |||||||||    
T  28837278 gattggcttatttgagcttatctactgacataag 28837311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 317
Target Start/End: Original strand, 29270285 - 29270342
Alignment:
Q  260 ttgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||| ||| ||||||||||| |||||||| ||||||||| || |||||| ||||||||    
T  29270285 ttgtccattagttgttttcaacttattttgataagttcttcatgatagcttataaaaa 29270342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 298
Target Start/End: Original strand, 30815658 - 30815695
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttct 298  Q
    |||||||||  |||||||||||||||||||||||||||    
T  30815658 tgttcataaaatgttttcagcttattttcataagttct 30815695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 295
Target Start/End: Original strand, 37517101 - 37517205
Alignment:
Q  190 tttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttc 289  Q
    ||||||||||| || |  |||||||| |||||||||||  ||||||||||  ||||||||||| | |||| | |||| ||| | ||||||  ||||||||    
T  37517101 tttgagcttatatacttgcataagttttgtgagactgtatgaaagaacttacgaaaacagcttat-gacaattttcaaaagcttttttcaatttattttc 37517199  T
Q  290 ataagt 295  Q
    ||||||    
T  37517200 ataagt 37517205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #100
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 306
Target Start/End: Original strand, 38867844 - 38867881
Alignment:
Q  269 agttgttttcagcttattttcataagttctccaagata 306  Q
    ||||||||| |||||||||||||||||||| |||||||    
T  38867844 agttgtttttagcttattttcataagttcttcaagata 38867881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #101
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 302
Target Start/End: Original strand, 41184628 - 41184696
Alignment:
Q  233 agaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcataagttctccaa 302  Q
    ||||||| |||||| ||||| || ||| | |||||||||| |||||| |||||||||||||||| |||||    
T  41184628 agaacttatgaaaatagcttatg-acaattttcataagtttttttcaacttattttcataagttttccaa 41184696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #102
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 319
Target Start/End: Complemental strand, 44422747 - 44422706
Alignment:
Q  278 cagcttattttcataagttctccaagatagcctataaaaata 319  Q
    ||||||||||||||||| |||||| |||||| ||||||||||    
T  44422747 cagcttattttcataagctctccaggatagcttataaaaata 44422706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #103
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 317
Target Start/End: Complemental strand, 1509843 - 1509760
Alignment:
Q  233 agaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||||||||| ||||||||| |||| ||| | |||||| | |||||| ||||||| || ||||||||||| | ||| ||||||||    
T  1509843 agaacttttggaaacagcttatggaaattct-cataagcttttttcaacttatttacacaagttctccaacagagcttataaaaa 1509760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #104
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 4576870 - 4576814
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||| ||||||||| ||||||||||||||||||||| | ||| ||||| ||| ||||    
T  4576870 tgtttataagttgtgttcagcttattttcataagttattcaatatagcttatgaaaa 4576814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #105
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 260 - 308
Target Start/End: Complemental strand, 6775053 - 6775005
Alignment:
Q  260 ttgttcataagttgttttcagcttattttcataagttctccaagatagc 308  Q
    ||||||||||| |||||||||||||||| | || ||||| |||||||||    
T  6775053 ttgttcataagctgttttcagcttatttacttatgttcttcaagatagc 6775005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #106
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 163 - 252
Target Start/End: Original strand, 9572013 - 9572098
Alignment:
Q  163 tattaagggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagctt 252  Q
    ||||||||| |||||||||||| ||| |||||    ||| | ||||||||| | |||||||||||| |  ||||||| ||||||||||||    
T  9572013 tattaagggtctgttaggattgacttttttga----atcaactgacataagatttgtgagactgtttgggagaacttatgaaaacagctt 9572098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #107
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 317
Target Start/End: Complemental strand, 16322910 - 16322858
Alignment:
Q  265 cataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    ||||||||||||| ||||||||| |||||| ||| ||| ||||||||| ||||    
T  16322910 cataagttgtttttagcttatttccataagctcttcaaaatagcctatgaaaa 16322858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #108
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 317
Target Start/End: Original strand, 17603310 - 17603445
Alignment:
Q  181 attggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcag 280  Q
    ||||||||| ||||| ||||||||   | |||||| |  |||||| ||||  |||||||  ||||||||||| || ||| | |||||||  | ||| ||     
T  17603310 attggcttacttgagtttatctataagcgtaagttttacgagactattagggagaacttacgaaaacagcttatg-acaattttcataaactttttacaa 17603408  T
Q  281 cttattttcataagttctccaagatagcctataaaaa 317  Q
    |||||||||| ||||||||||| ||||| ||||||||    
T  17603409 cttattttcagaagttctccaatatagcttataaaaa 17603445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #109
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 167 - 203
Target Start/End: Complemental strand, 21002313 - 21002277
Alignment:
Q  167 aagggcctgttaggattggcttatttgagcttatcta 203  Q
    |||||| |||| |||||||||||||||||||||||||    
T  21002313 aagggcttgtttggattggcttatttgagcttatcta 21002277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #110
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 28077074 - 28077130
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||||||||||||||||||||||||||  ||||| |||| || ||||| ||| ||||    
T  28077074 tgttcataagttgttttcagcttatttcaataagctctctaaaatagcttatgaaaa 28077130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #111
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 297
Target Start/End: Complemental strand, 31118108 - 31118072
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttc 297  Q
    ||||||| ||||||||||||||||||| |||||||||    
T  31118108 tgttcatcagttgttttcagcttatttccataagttc 31118072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #112
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 35017727 - 35017695
Alignment:
Q  180 gattggcttatttgagcttatctattgacataa 212  Q
    ||||||||||||||||||||||||||| |||||    
T  35017727 gattggcttatttgagcttatctattggcataa 35017695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #113
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 36872885 - 36872825
Alignment:
Q  168 agggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgtt 228  Q
    |||||||||| |||||||||||||| |||||| |||   ||||||||| || |||||||||    
T  36872885 agggcctgtttggattggcttatttaagcttaactaacaacataagttttgcgagactgtt 36872825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #114
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 299
Target Start/End: Complemental strand, 37818498 - 37818466
Alignment:
Q  267 taagttgttttcagcttattttcataagttctc 299  Q
    ||||||||||||||||||||| |||||||||||    
T  37818498 taagttgttttcagcttatttccataagttctc 37818466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #115
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 294
Target Start/End: Original strand, 48748321 - 48748353
Alignment:
Q  262 gttcataagttgttttcagcttattttcataag 294  Q
    |||||||||||||||||||||||||| ||||||    
T  48748321 gttcataagttgttttcagcttatttccataag 48748353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #116
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 317
Target Start/End: Original strand, 51929525 - 51929600
Alignment:
Q  241 tgaaaacagcttctggacattgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||||||||||| || ||| | |||||||| | |||||| ||||||| |||||||||||||| ||||  ||||||||    
T  51929525 tgaaaacagcttatg-acaattttcataagcttttttcaacttatttccataagttctccaatatagtttataaaaa 51929600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 2e-22; HSPs: 55)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 163 - 293
Target Start/End: Complemental strand, 848150 - 848022
Alignment:
Q  163 tattaagggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattg 262  Q
    |||| |||||||||| |||||| ||||||||||||||||||| | |||||||| |||||||||||| | |||||||| | ||||| |||| | ||||||     
T  848150 tatttagggcctgtttggattgccttatttgagcttatctatag-cataagttttgtgagactgtttggaagaacttataaaaactgcttat-gacattt 848053  T
Q  263 ttcataagttgttttcagcttattttcataa 293  Q
    ||| |||| | ||||||||||||||||||||    
T  848052 ttcttaagcttttttcagcttattttcataa 848022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 179 - 305
Target Start/End: Complemental strand, 13907729 - 13907606
Alignment:
Q  179 ggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttc 278  Q
    ||||| ||||||||||| ||||||| || |||||||| ||  |||| ||| || |||| || ||||||||||||||| |||||||||| ||||| |||||    
T  13907729 ggattcgcttatttgagtttatctagtggcataagttttg--agacggtttgagagaatttatgaaaacagcttctg-acattgttcacaagttattttc 13907633  T
Q  279 agcttattttcataagttctccaagat 305  Q
    || |||||||||||| |||||||||||    
T  13907632 agtttattttcataatttctccaagat 13907606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 172 - 302
Target Start/End: Original strand, 34910326 - 34910455
Alignment:
Q  172 cctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagt 271  Q
    |||||| ||| ||||||||||||| ||||||| ||| || |||| || |||| |||| | |||||  | |||||||||||| || ||||||||||| |||    
T  34910326 cctgtttggactggcttatttgagtttatctactgatatcagttttgggagattgtttggaagaaactatgaaaacagcttatg-acattgttcatgagt 34910424  T
Q  272 tgttttcagcttattttcataagttctccaa 302  Q
    ||||||| ||||| |||||||||||||||||    
T  34910425 tgttttccgcttactttcataagttctccaa 34910455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 181 - 305
Target Start/End: Complemental strand, 2455403 - 2455280
Alignment:
Q  181 attggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcag 280  Q
    ||||| |||||||||||||||||   |||||||||  |||| ||| || || ||||||| |||||||| ||| |  |||||||| |||||||||||||||    
T  2455403 attggtttatttgagcttatctacaaacataagtttggtgaaactatttgagagaacttatgaaaacaacttatt-acattgtttataagttgttttcag 2455305  T
Q  281 cttattttcataagttctccaagat 305  Q
    |||||||||| || |||||||||||    
T  2455304 cttattttcacaacttctccaagat 2455280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 302
Target Start/End: Complemental strand, 2455132 - 2455015
Alignment:
Q  181 attggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcag 280  Q
    ||||| |||||||| |||||||| | ||||||||| |||||||||||| |  ||||||| |||||||   || || |||||||||||||  |||||||||    
T  2455132 attggtttatttgaacttatctactaacataagttttgtgagactgtttgggagaacttctgaaaac---ttatg-acattgttcataacctgttttcag 2455037  T
Q  281 cttattttcataagttctccaa 302  Q
    ||||||||||| ||||||||||    
T  2455036 cttattttcattagttctccaa 2455015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 232 - 317
Target Start/End: Complemental strand, 31624182 - 31624099
Alignment:
Q  232 aagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||||||| |||||||||||| || |||| ||||||||| |||||||| ||||||||||||| |||||||||||||||||| ||||    
T  31624182 aagaacttatgaaaacagcttatg-acat-gttcataagctgttttcaacttattttcataatttctccaagatagcctatgaaaa 31624099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 195 - 307
Target Start/End: Original strand, 9912131 - 9912242
Alignment:
Q  195 gcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcataag 294  Q
    ||||||||| ||| ||||||| || | |||||||    ||||||| ||||| |||||| || |||||||||||||| |||||| ||||||||||||||||    
T  9912131 gcttatctactgatataagttttgggcgactgtttcggagaacttatgaaaccagcttatg-acattgttcataagctgttttgagcttattttcataag 9912229  T
Q  295 ttctccaagatag 307  Q
    |||||||| ||||    
T  9912230 ttctccaatatag 9912242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 195 - 308
Target Start/End: Complemental strand, 31813291 - 31813179
Alignment:
Q  195 gcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcataag 294  Q
    |||||| || || |||||||| ||||||||| || |  ||||||| ||||||  |||| || | ||||||||||||  |||||||||||||||||||| |    
T  31813291 gcttatttactggcataagttttgtgagactatttgggagaacttatgaaaattgcttatg-agattgttcataagccgttttcagcttattttcatatg 31813193  T
Q  295 ttctccaagatagc 308  Q
    ||||||||||||||    
T  31813192 ttctccaagatagc 31813179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 35069524 - 35069585
Alignment:
Q  167 aagggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgtt 228  Q
    ||||||||||| | ||||||||||||||||||||||| ||||||||||| ||| ||||||||    
T  35069524 aagggcctgtttgtattggcttatttgagcttatctactgacataagttttgtaagactgtt 35069585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 317
Target Start/End: Complemental strand, 33089645 - 33089515
Alignment:
Q  186 cttatttgagcttatctattgacataagt-tgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagctta 284  Q
    |||||||||||||||||| ||||||| || | ||||||||| ||  | ||||||| ||||||||||||  |||||| ||| ||||||||||||  |||||    
T  33089645 cttatttgagcttatctactgacatatgtatttgtgagactatttcagagaacttatgaaaacagctta-ggacat-gtttataagttgttttacgctta 33089548  T
Q  285 ttttcataagttctccaagatagcctataaaaa 317  Q
    |||||||| | || |||||||||| ||| ||||    
T  33089547 ttttcataggctccccaagatagcttatgaaaa 33089515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 317
Target Start/End: Original strand, 835265 - 835310
Alignment:
Q  272 tgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||    
T  835265 tgttttcagcttattttcataagttctccaagatagcttatgaaaa 835310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 257 - 302
Target Start/End: Original strand, 9109252 - 9109297
Alignment:
Q  257 acattgttcataagttgttttcagcttattttcataagttctccaa 302  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||    
T  9109252 acattgttcataagttgttttcaccttattttcataggttctccaa 9109297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 217 - 305
Target Start/End: Complemental strand, 2735177 - 2735090
Alignment:
Q  217 tgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcataagttctccaagat 305  Q
    |||||||||||| || | ||||| ||||||| |||| || ||||| |||||||| ||||||| ||||||||||||||||| | ||||||    
T  2735177 tgtgagactgtttgagataacttatgaaaacggcttatg-acatttttcataagctgttttcggcttattttcataagttgttcaagat 2735090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 168 - 317
Target Start/End: Complemental strand, 6538671 - 6538521
Alignment:
Q  168 agggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcat 267  Q
    |||||||||| |||||| |||||||||| |||| || || ||||||||  ||||||||||| |  |||| |  |||||||||||| |||  ||| |||||    
T  6538671 agggcctgtttggattgtcttatttgagtttatgtagtggcataagtttggtgagactgttcgggagaattgatgaaaacagcttatggtgatt-ttcat 6538573  T
Q  268 aagt--tgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    ||    | | |||| |||||||| ||||||||||||| ||||||||||||||    
T  6538572 aaaaaatatattcaacttattttaataagttctccaatatagcctataaaaa 6538521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 241 - 317
Target Start/End: Original strand, 34430447 - 34430522
Alignment:
Q  241 tgaaaacagcttctggacattgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||||||||||| || |||||  ||||||| | |||||||||||||||||||| |||||||||||||| ||| ||||    
T  34430447 tgaaaacagcttatg-acatttatcataagcttttttcagcttattttcataacttctccaagatagcttatgaaaa 34430522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 169 - 314
Target Start/End: Original strand, 35070568 - 35070708
Alignment:
Q  169 gggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcata 268  Q
    ||||||||| ||||||||||||||||||||| ||| || || ||||  ||||||||||    | |||||||  ||||||||||| || ||| | |||| |    
T  35070568 gggcctgtttggattggcttatttgagcttacctactggcacaagtcttgtgagactg----agagaacttacgaaaacagcttatg-acaattttcaca 35070662  T
Q  269 agttgttttcagcttattttcataagttctccaagatagcctataa 314  Q
    || | ||||  |||| |||||||||||||||||| ||||| |||||    
T  35070663 agcttttttgggcttgttttcataagttctccaaaatagcttataa 35070708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 261 - 308
Target Start/End: Complemental strand, 4420708 - 4420661
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctccaagatagc 308  Q
    |||||||||| |||||||||||||||| |||||| |||||||||||||    
T  4420708 tgttcataagctgttttcagcttatttccataagctctccaagatagc 4420661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 317
Target Start/End: Complemental strand, 103584 - 103440
Alignment:
Q  171 gcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataag 270  Q
    ||||||| |||||| ||||||||||||||| ||||  |||||||| |||| || |||| || |||||||   |||||||||| | |||| | |||||||     
T  103584 gcctgtttggattgacttatttgagcttatatattagcataagttttgtgtgattgttcgagagaacttacaaaaacagcttat-gaca-tattcataaa 103487  T
Q  271 ttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
     ||||| |||||| ||||||| || |||||| |||||| ||| ||||    
T  103486 ctgtttacagcttgttttcattagatctccaggatagcttatgaaaa 103440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 274 - 308
Target Start/End: Original strand, 837234 - 837268
Alignment:
Q  274 ttttcagcttattttcataagttctccaagatagc 308  Q
    |||||||||||||||||||||||||||||||||||    
T  837234 ttttcagcttattttcataagttctccaagatagc 837268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 248
Target Start/End: Original strand, 10645304 - 10645378
Alignment:
Q  174 tgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaaca 248  Q
    |||| ||||||||| ||||||| ||||||| ||||||||||| ||| |||||||| |  ||||||| ||||||||    
T  10645304 tgtttggattggctaatttgaggttatctaatgacataagttttgtaagactgtttgggagaacttatgaaaaca 10645378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 305
Target Start/End: Original strand, 33832179 - 33832322
Alignment:
Q  157 atttcatattaagggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctgg 256  Q
    |||||||||| || | || || ||||| |||||||||| |||||||| || ||||||||   |||| |||||  | ||||||| |||||||| ||| ||     
T  33832179 atttcatattgagagtctatttggattagcttatttgaacttatctaatgtcataagtt---tgagtctgtttaagagaacttatgaaaacaacttatg- 33832274  T
Q  257 acattgttcataagttgttttcagcttattttcataagttctccaagat 305  Q
    |||| ||| |||||||||||| ||||||||||||||  ||||| |||||    
T  33832275 acat-gtttataagttgtttttagcttattttcatatattctctaagat 33832322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 298
Target Start/End: Original strand, 34882421 - 34882463
Alignment:
Q  256 gacattgttcataagttgttttcagcttattttcataagttct 298  Q
    |||||||||||||||||||||||  ||||||||||||||||||    
T  34882421 gacattgttcataagttgttttccacttattttcataagttct 34882463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 835034 - 835077
Alignment:
Q  265 cataagttgttttcagcttattttcataagttctccaagatagcc 309  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||    
T  835034 cataagtt-ttttcagcttattttcataagttctccaagacagcc 835077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 6647452 - 6647396
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    |||||||||| |||||||| |||||||||||||| |||| |||||||| ||| ||||    
T  6647452 tgttcataagatgttttcaacttattttcataagctctctaagatagcttatgaaaa 6647396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 317
Target Start/End: Original strand, 20368131 - 20368241
Alignment:
Q  205 tgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcataagttctccaaga 304  Q
    ||||||||||| ||| ||||| || |  ||||||| |||||||| ||| || |||| ||||||||| |  ||||| ||||||||||||||||||||||||    
T  20368131 tgacataagttttgtaagactatttgggagaacttatgaaaacaacttatg-acat-gttcataagctagtttcaacttattttcataagttctccaaga 20368228  T
Q  305 tagcctataaaaa 317  Q
     ||| ||| ||||    
T  20368229 aagcttatgaaaa 20368241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 302
Target Start/End: Complemental strand, 24982868 - 24982729
Alignment:
Q  162 atattaagggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacatt 261  Q
    |||||||||| ||||| |||||| || ||| || |||||||| | ||||||||| ||||||||||||    ||||| ||||| |||||||| | ||||||    
T  24982868 atattaagggactgtttggattgactaattagatcttatctactaacataagttttgtgagactgttttggagaacatttgagaacagcttat-gacatt 24982770  T
Q  262 gttcataagttgttttcagcttattttcataagttctccaa 302  Q
     || || || | |||| ||||||   |||||||||||||||    
T  24982769 tttaatgagctttttttagcttaccctcataagttctccaa 24982729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 31624957 - 31624993
Alignment:
Q  272 tgttttcagcttattttcataagttctccaagatagc 308  Q
    ||||||||||||||||||||||||||||||| |||||    
T  31624957 tgttttcagcttattttcataagttctccaatatagc 31624993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 319
Target Start/End: Complemental strand, 696694 - 696609
Alignment:
Q  232 aagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaata 319  Q
    |||||||| | |||||||||| || |||| ||||||||| ||||||||||||||| ||||||||  || ||||||| |||| ||||||    
T  696694 aagaacttatcaaaacagcttatg-acat-gttcataagctgttttcagcttattctcataagtcatcgaagataggctattaaaata 696609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 267 - 306
Target Start/End: Original strand, 738550 - 738589
Alignment:
Q  267 taagttgttttcagcttattttcataagttctccaagata 306  Q
    |||||||||||||||||||||  |||||||||||||||||    
T  738550 taagttgttttcagcttatttctataagttctccaagata 738589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 167 - 214
Target Start/End: Original strand, 10452333 - 10452380
Alignment:
Q  167 aagggcctgttaggattggcttatttgagcttatctattgacataagt 214  Q
    |||||| |||| ||||||||||||||||||||||||||| | ||||||    
T  10452333 aagggcatgtttggattggcttatttgagcttatctatttatataagt 10452380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 261 - 308
Target Start/End: Original strand, 17241257 - 17241304
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataagttctccaagatagc 308  Q
    ||||||||||||||||||| ||||||| |||||  |||||||||||||    
T  17241257 tgttcataagttgttttcaacttatttccataaactctccaagatagc 17241304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 168 - 223
Target Start/End: Original strand, 21405067 - 21405122
Alignment:
Q  168 agggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgaga 223  Q
    |||| ||||| |||||| ||||||||||||||| || ||||||||||| |||||||    
T  21405067 agggtctgtttggattgacttatttgagcttatatactgacataagttttgtgaga 21405122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 263 - 294
Target Start/End: Complemental strand, 31421008 - 31420977
Alignment:
Q  263 ttcataagttgttttcagcttattttcataag 294  Q
    ||||||||||||||||||||||||||||||||    
T  31421008 ttcataagttgttttcagcttattttcataag 31420977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 308
Target Start/End: Complemental strand, 264415 - 264381
Alignment:
Q  274 ttttcagcttattttcataagttctccaagatagc 308  Q
    ||||||| |||||||||||||||||||||||||||    
T  264415 ttttcagtttattttcataagttctccaagatagc 264381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 307
Target Start/End: Complemental strand, 3528864 - 3528822
Alignment:
Q  265 cataagttgttttcagcttattttcataagttctccaagatag 307  Q
    ||||| ||||||||| |||||||||||||| ||||||||||||    
T  3528864 cataacttgttttcatcttattttcataagctctccaagatag 3528822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 4163304 - 4163250
Alignment:
Q  174 tgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgtt 228  Q
    |||| ||||||||||||||||||||||||| || |||||||| |  |||||||||    
T  4163304 tgtttggattggcttatttgagcttatctactggcataagttttacgagactgtt 4163250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 4224925 - 4224871
Alignment:
Q  174 tgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgtt 228  Q
    |||| ||||||||||||||||||||||||| || |||||||| |  |||||||||    
T  4224925 tgtttggattggcttatttgagcttatctactggcataagttttacgagactgtt 4224871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 308
Target Start/End: Original strand, 7785754 - 7785796
Alignment:
Q  266 ataagttgttttcagcttattttcataagttctccaagatagc 308  Q
    |||||||||||||||||||||| |||||| ||||||| |||||    
T  7785754 ataagttgttttcagcttatttccataagctctccaaaatagc 7785796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 213
Target Start/End: Original strand, 25103206 - 25103256
Alignment:
Q  163 tattaagggcctgttaggattggcttatttgagcttatctattgacataag 213  Q
    ||||||||| ||||| | ||||||| |||||||||||||||||| ||||||    
T  25103206 tattaagggtctgtttgaattggctaatttgagcttatctattggcataag 25103256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 307
Target Start/End: Complemental strand, 26694931 - 26694897
Alignment:
Q  273 gttttcagcttattttcataagttctccaagatag 307  Q
    |||||||||||||||||||||||||| ||||||||    
T  26694931 gttttcagcttattttcataagttcttcaagatag 26694897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 252
Target Start/End: Complemental strand, 30926674 - 30926592
Alignment:
Q  170 ggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagctt 252  Q
    |||||||| || ||||||||||||||||||| |  || ||||| ||   |||||||||| | |||||||| ||||||||||||    
T  30926674 ggcctgtttggtttggcttatttgagcttattttctggcataaatttgatgagactgtttggaagaacttatgaaaacagctt 30926592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 308
Target Start/End: Original strand, 836556 - 836593
Alignment:
Q  271 ttgttttcagcttattttcataagttctccaagatagc 308  Q
    |||||||||||| |||||||||||||| ||||||||||    
T  836556 ttgttttcagctcattttcataagttccccaagatagc 836593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 293
Target Start/End: Complemental strand, 1575843 - 1575783
Alignment:
Q  232 aagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttattttcataa 293  Q
    |||||||| |||||||||||| || |||| || |||||| |||||||| |||||||||||||    
T  1575843 aagaacttatgaaaacagcttatgaacat-gtccataaggtgttttcaacttattttcataa 1575783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 294
Target Start/End: Complemental strand, 6537012 - 6536979
Alignment:
Q  261 tgttcataagttgttttcagcttattttcataag 294  Q
    ||||||||||||||||||||||||||| ||||||    
T  6537012 tgttcataagttgttttcagcttatttccataag 6536979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 294
Target Start/End: Complemental strand, 9027639 - 9027610
Alignment:
Q  265 cataagttgttttcagcttattttcataag 294  Q
    ||||||||||||||||||||||||||||||    
T  9027639 cataagttgttttcagcttattttcataag 9027610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 317
Target Start/End: Original strand, 9093556 - 9093617
Alignment:
Q  256 gacattgttcataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    ||||||||| ||||  |||||||||||||||||| ||||||||| |||| ||| ||| ||||    
T  9093556 gacattgttaataacctgttttcagcttattttcttaagttctctaagacagcttatgaaaa 9093617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 313
Target Start/End: Complemental strand, 12628424 - 12628355
Alignment:
Q  241 tgaaaacagcttctggacattgttcataagttgttttcagcttattttcataagttctccaagatagcctata 313  Q
    ||||||||||||||| |||||  |||| || |||||||| |||| ||||||||||||||||| ||||| ||||    
T  12628424 tgaaaacagcttctg-acatt--tcattagctgttttcaacttactttcataagttctccaaaatagcttata 12628355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 317
Target Start/End: Complemental strand, 31624412 - 31624267
Alignment:
Q  173 ctgttaggattggcttatttgagcttatctattgacataagttgtgt---gagactgttagaaagaacttttgaaaacagcttctggacattgttcataa 269  Q
    ||||| |||||||||||||||||||||| || ||||||||| ||| |   ||||||||| |  |||| || |||||||||||  || |||| || |||||    
T  31624412 ctgtttggattggcttatttgagcttatatactgacataagctgttttgagagactgtttggtagaatttatgaaaacagctcatg-acat-gtccataa 31624315  T
Q  270 gttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    ||| |||| |  |||||||||||| ||| |||||| ||| ||| ||||    
T  31624314 gttattttaatgttattttcataatttcaccaagacagcttattaaaa 31624267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 225
Target Start/End: Original strand, 658463 - 658499
Alignment:
Q  189 atttgagcttatctattgacataagttgtgtgagact 225  Q
    ||||||| ||||||||||||||||||| |||||||||    
T  658463 atttgagtttatctattgacataagttttgtgagact 658499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 307
Target Start/End: Original strand, 9913346 - 9913386
Alignment:
Q  267 taagttgttttcagcttattttcataagttctccaagatag 307  Q
    |||| ||||||  ||||||||||||||||||||||||||||    
T  9913346 taagctgttttgtgcttattttcataagttctccaagatag 9913386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 317
Target Start/End: Complemental strand, 10031793 - 10031741
Alignment:
Q  265 cataagttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    ||||||||||||||| ||||||| | |||| ||||||||| ||| ||||||||    
T  10031793 cataagttgttttcatcttatttccttaagctctccaagacagcttataaaaa 10031741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 299
Target Start/End: Complemental strand, 21024274 - 21024238
Alignment:
Q  263 ttcataagttgttttcagcttattttcataagttctc 299  Q
    |||||| |||||||||| |||||||||||||||||||    
T  21024274 ttcatatgttgttttcaacttattttcataagttctc 21024238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 301
Target Start/End: Original strand, 27909647 - 27909683
Alignment:
Q  265 cataagttgttttcagcttattttcataagttctcca 301  Q
    ||||||||||||||||||||||| |||||| ||||||    
T  27909647 cataagttgttttcagcttatttccataagctctcca 27909683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 33068520 - 33068560
Alignment:
Q  173 ctgttaggattggcttatttgagcttatctattgacataag 213  Q
    ||||| |||||||||||||||| |||||||| |||||||||    
T  33068520 ctgtttggattggcttatttgaacttatctactgacataag 33068560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 308
Target Start/End: Original strand, 34508661 - 34508712
Alignment:
Q  256 gacattgttcataagttgttttcagcttattttcataagttctccaagatagc 308  Q
    ||||||||||||||| || ||||||| |||||| ||| |||||||||||||||    
T  34508661 gacattgttcataagctgctttcagcatatttt-atatgttctccaagatagc 34508712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 170 - 308
Target Start/End: Complemental strand, 22386 - 22249
Alignment:
Q  170 ggcctgttaggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataa 269  Q
    |||||||||||||| |||||||| |||||||||| || |||||||| |||||| |||||    | ||||| |  ||||||||| | |||| | ||| |||    
T  22386 ggcctgttaggatttgcttattttagcttatctaatggcataagttttgtgagcctgttccggaaaacttatagaaacagcttat-gacaattttcgtaa 22288  T
Q  270 gttgttttcagcttattttcataagttctccaagatagc 308  Q
    | | ||||||||||||||||||||||| ||||| |||||    
T  22287 gcttttttcagcttattttcataagttttccaacatagc 22249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 187 - 296
Target Start/End: Complemental strand, 24759 - 24651
Alignment:
Q  187 ttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttctggacattgttcataagttgttttcagcttatt 286  Q
    |||||||||| ||||||||| |||| ||| |||||||||||| |  ||||||| | |||||||||| | |||||| |||| ||| || |||||| ||||     
T  24759 ttatttgagcgtatctattggcatatgttttgtgagactgtttgggagaacttatcaaaacagcttat-gacattcttcaaaagctgctttcagtttatg 24661  T
Q  287 ttcataagtt 296  Q
     |||||||||    
T  24660 ctcataagtt 24651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 24993 - 24953
Alignment:
Q  163 tattaagggcctgttaggattggcttatttgagcttatcta 203  Q
    |||||||||||||||  ||||||||||||||||| ||||||    
T  24993 tattaagggcctgttttgattggcttatttgagcgtatcta 24953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 317
Target Start/End: Complemental strand, 23686 - 23640
Alignment:
Q  271 ttgttttcagcttattttcataagttctccaagatagcctataaaaa 317  Q
    ||||||||| |||||||||| ||||||||||| ||||| ||||||||    
T  23686 ttgttttcaacttattttcacaagttctccaatatagcttataaaaa 23640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 203
Target Start/End: Original strand, 159887 - 159921
Alignment:
Q  169 gggcctgttaggattggcttatttgagcttatcta 203  Q
    ||||||||| |||||||||||||||||||||||||    
T  159887 gggcctgtttggattggcttatttgagcttatcta 159921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 305
Target Start/End: Original strand, 178342 - 178374
Alignment:
Q  273 gttttcagcttattttcataagttctccaagat 305  Q
    ||||||||||||||||||||||||||| |||||    
T  178342 gttttcagcttattttcataagttctcaaagat 178374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University