View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17739_high_8 (Length: 309)
Name: NF17739_high_8
Description: NF17739
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17739_high_8 |
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Alignment Details
Target: chr5 (Bit Score: 273; Significance: 1e-152; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 32291308 - 32291596
Alignment:
| Q |
1 |
atgtgacgctcggattgggggatttgttggttctgaagtcatacttagattagaactatggg-tgacagcattgattgttgtgtagtggtggtgtatgtc |
99 |
Q |
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| T |
32291308 |
atgtgacgctcggattgggggatttgttggttctgaagtcatacttagattagaactatggggtgacagcattgattgttgtgtagtggtggtgtatgtc |
32291407 |
T |
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| Q |
100 |
ggttactttattccaaaacagcaaataaaagcaaaacttgtg-cagatgaatatacacaaacttgtttccacgcacacaacacatgcacgctttaatttc |
198 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32291408 |
ggttactttattccaaaacagcaaataaaagcaaaacttgtggcagatgaatatacacaaacttgtttccacgcacacaacacatgcacgctttaatttc |
32291507 |
T |
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| Q |
199 |
atttcttcgatgtatggaaatggtgctactactgttatgcttgcttgcttactgtgttgcctgttcattgcaattcacaacacgttttt |
287 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32291508 |
atttcttcgatgtatggaaatggtgctactactgttatgcttgcttgcttactgtgttgcctgttcattgcaattcacaacacgttttt |
32291596 |
T |
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