View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17739_low_4 (Length: 383)
Name: NF17739_low_4
Description: NF17739
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17739_low_4 |
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Alignment Details
Target: chr7 (Bit Score: 348; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 348; E-Value: 0
Query Start/End: Original strand, 22 - 373
Target Start/End: Original strand, 48469041 - 48469392
Alignment:
| Q |
22 |
gcctcgtcaccggtttccgccacctcaacgatgataattcggagatatgttgttcgccggaaggtggaaacatgttcccctccgttcgtcttcttcttcg |
121 |
Q |
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| T |
48469041 |
gcctcgtcaccggtttccgccacctcaacgatgataattcggagatatgttgttcgccggaaggtggaaacatgttcccctccgttcgtcttcttcttcg |
48469140 |
T |
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| Q |
122 |
tctgaaaggtgggaaaggaggattcggatcgttgcttcgtggagcagcgacgaaagctgggcagaagaagacgaataacttcgacgcttgtagggatatg |
221 |
Q |
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| T |
48469141 |
tctgaaaggtgggaaaggaggattcggatcgttgcttcgtggagcagcgacgaaagctgggcagaagaagacgaataacttcgacgcttgtagggatatg |
48469240 |
T |
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| Q |
222 |
agtgggagaaggttgaggcatgttaatgcggagaagaggttggaggagtggagagaaggggaagaagataggaagcttgagaaaacggcggaggagtttt |
321 |
Q |
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| T |
48469241 |
agtgggagaaggttgaggcatgttaatgcggagaagaggttggaggagtggagagaaggggaagaagataggaagcttgagaaaacggcggaggagtttt |
48469340 |
T |
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| Q |
322 |
tgaagaaacagatgaagaagaataataaggggaaggggaagaatgatgatgt |
373 |
Q |
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| T |
48469341 |
tgaagaaacagatgaagaagaataataaggggaaggggaagaatggtgatgt |
48469392 |
T |
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