View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1773_high_145 (Length: 243)
Name: NF1773_high_145
Description: NF1773
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1773_high_145 |
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Alignment Details
Target: chr4 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 55396141 - 55396368
Alignment:
| Q |
1 |
agtaaagatcttcaaatggatcaaagttgggcgcataagttcattaccggcacaacataagcagcaaattttaataattctaggatacctctaatcattt |
100 |
Q |
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| T |
55396141 |
agtaaagatcttcaaatggatcaaagttgggcgcataagttcattaacggcacaacataagcagcaaattttaataattctaggatacctctaatcattt |
55396240 |
T |
|
| Q |
101 |
aattcaataattaaatagaaggagttcattcaattcaacacttgcatgcttcagatcctttcattaccactttacctgagaagtaaagcgattaatattc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
55396241 |
aattcaataattaaatagaaggagttcattcaattcaacacttgcatgcttcagatcctttcattaccactttacctgagaagtaaagcgattaatattc |
55396340 |
T |
|
| Q |
201 |
gtcacagtggtgagctttgggtgagttc |
228 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
55396341 |
gtcacagtggtgagctttgggtgagttc |
55396368 |
T |
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