View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1773_high_165 (Length: 225)
Name: NF1773_high_165
Description: NF1773
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1773_high_165 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 932602 - 932826
Alignment:
| Q |
1 |
atgaataaatgttcctctaatctattgataaaatcacctactacatggatgatgcatatgatatattttggagaagttacatttcttcatggcagacttt |
100 |
Q |
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| T |
932602 |
atgaataaatgttcctctaatctattgataaaatcacctactacatggatgatgcatatgatatattttggagaagttacatttcttcatggcagacttt |
932701 |
T |
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| Q |
101 |
tatttttatatatagaaaaaagagagcagcttttgtttatagtatatgatgactgccatatattgagtactttgtatcttgaaatgttagatttcaagat |
200 |
Q |
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| T |
932702 |
catttttatatatagaaaaaagagagcagcttttgtttatagtatatgatgactgccatatattgagtactttgtatcttgaaatgttagatttcaagat |
932801 |
T |
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| Q |
201 |
gagtaagaatttgtcacgatatatc |
225 |
Q |
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| T |
932802 |
gagtaagaatttgtcacgatatatc |
932826 |
T |
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