View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1773_high_46 (Length: 449)

Name: NF1773_high_46
Description: NF1773
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1773_high_46
NF1773_high_46
[»] chr5 (56 HSPs)
chr5 (22-438)||(13130645-13131061)
chr5 (200-340)||(18921119-18921259)
chr5 (200-339)||(10398378-10398517)
chr5 (22-185)||(25360397-25360566)
chr5 (22-277)||(36311670-36311928)
chr5 (281-372)||(36311476-36311567)
chr5 (195-296)||(12743628-12743729)
chr5 (195-296)||(12806449-12806550)
chr5 (281-372)||(16417673-16417764)
chr5 (293-372)||(31488537-31488616)
chr5 (22-121)||(17195237-17195342)
chr5 (200-312)||(17366239-17366350)
chr5 (284-368)||(23228185-23228269)
chr5 (293-372)||(10976365-10976444)
chr5 (293-372)||(19748523-19748600)
chr5 (283-339)||(33371562-33371618)
chr5 (22-115)||(12805944-12806043)
chr5 (22-115)||(18920958-18921056)
chr5 (293-372)||(34595768-34595848)
chr5 (293-372)||(6998592-6998671)
chr5 (54-104)||(18921351-18921401)
chr5 (293-366)||(7575678-7575751)
chr5 (116-185)||(19748284-19748353)
chr5 (22-115)||(12743126-12743225)
chr5 (293-372)||(25360265-25360342)
chr5 (295-372)||(25360149-25360224)
chr5 (22-115)||(33371069-33371167)
chr5 (54-115)||(2599514-2599575)
chr5 (279-372)||(8531762-8531855)
chr5 (293-372)||(10976151-10976228)
chr5 (200-260)||(36311495-36311555)
chr5 (293-372)||(11477473-11477552)
chr5 (195-249)||(12743294-12743348)
chr5 (195-249)||(12806113-12806167)
chr5 (293-355)||(19748422-19748484)
chr5 (397-437)||(15794711-15794751)
chr5 (22-89)||(17366400-17366472)
chr5 (397-437)||(19575845-19575885)
chr5 (125-185)||(23228591-23228651)
chr5 (122-189)||(31488206-31488273)
chr5 (213-260)||(34595768-34595815)
chr5 (293-355)||(12743631-12743693)
chr5 (293-355)||(12806452-12806514)
chr5 (297-355)||(13130827-13130885)
chr5 (116-185)||(28718283-28718353)
chr5 (293-355)||(31238508-31238570)
chr5 (214-260)||(33371572-33371618)
chr5 (387-437)||(34595911-34595961)
chr5 (388-437)||(19748664-19748713)
chr5 (388-437)||(26604065-26604114)
chr5 (388-437)||(36311363-36311412)
chr5 (294-377)||(7575889-7575970)
chr5 (116-188)||(10976027-10976099)
chr5 (384-420)||(16417577-16417613)
chr5 (293-372)||(16417889-16417966)
chr5 (293-341)||(19575695-19575743)
[»] chr4 (62 HSPs)
chr4 (22-438)||(17292187-17292610)
chr4 (187-438)||(24576512-24576772)
chr4 (209-353)||(18413142-18413286)
chr4 (195-355)||(13866587-13866748)
chr4 (195-339)||(3393911-3394055)
chr4 (195-355)||(31324497-31324657)
chr4 (224-355)||(9717935-9718066)
chr4 (200-336)||(17211882-17212018)
chr4 (224-355)||(21411353-21411484)
chr4 (224-355)||(21411961-21412092)
chr4 (213-353)||(10315154-10315294)
chr4 (281-372)||(20758613-20758704)
chr4 (281-372)||(20765004-20765095)
chr4 (195-265)||(13851073-13851143)
chr4 (286-372)||(25145199-25145285)
chr4 (22-115)||(13866488-13866587)
chr4 (281-372)||(24075761-24075852)
chr4 (283-340)||(4911019-4911076)
chr4 (22-115)||(13850974-13851073)
chr4 (293-372)||(23124349-23124426)
chr4 (281-368)||(23620559-23620644)
chr4 (25-115)||(13854979-13855075)
chr4 (48-123)||(23620448-23620523)
chr4 (195-266)||(44100843-44100914)
chr4 (281-372)||(44101033-44101124)
chr4 (286-372)||(12227057-12227143)
chr4 (45-115)||(13866751-13866821)
chr4 (125-185)||(25144756-25144816)
chr4 (187-260)||(23620559-23620632)
chr4 (54-115)||(31324436-31324497)
chr4 (195-260)||(31324595-31324660)
chr4 (290-355)||(49816801-49816866)
chr4 (195-255)||(9718009-9718069)
chr4 (200-260)||(18413226-18413286)
chr4 (397-437)||(20758500-20758540)
chr4 (125-185)||(20759055-20759115)
chr4 (397-437)||(20764891-20764931)
chr4 (125-185)||(20765446-20765506)
chr4 (129-185)||(24075320-24075376)
chr4 (397-437)||(44101198-44101238)
chr4 (187-269)||(25144874-25144956)
chr4 (293-355)||(31324500-31324562)
chr4 (199-260)||(10315234-10315295)
chr4 (201-266)||(12227267-12227332)
chr4 (195-260)||(13866686-13866751)
chr4 (200-260)||(4911006-4911066)
chr4 (22-115)||(18413031-18413130)
chr4 (397-437)||(24075925-24075965)
chr4 (200-252)||(49816803-49816855)
chr4 (293-340)||(12227273-12227320)
chr4 (293-355)||(13851076-13851138)
chr4 (309-339)||(24607690-24607720)
chr4 (54-112)||(31324663-31324721)
chr4 (144-185)||(23124253-23124294)
chr4 (200-260)||(20758632-20758692)
chr4 (200-260)||(20765023-20765083)
chr4 (195-255)||(21411350-21411410)
chr4 (195-255)||(21412035-21412095)
chr4 (293-368)||(24075434-24075507)
chr4 (200-260)||(24576606-24576666)
chr4 (397-437)||(25145358-25145398)
chr4 (293-380)||(44100823-44100908)
[»] chr2 (37 HSPs)
chr2 (22-384)||(31991548-31991913)
chr2 (195-339)||(20148751-20148895)
chr2 (200-339)||(16708018-16708157)
chr2 (200-339)||(16708468-16708607)
chr2 (223-340)||(15891389-15891506)
chr2 (279-372)||(18879170-18879263)
chr2 (206-277)||(27650168-27650239)
chr2 (281-372)||(28276342-28276433)
chr2 (293-372)||(12763853-12763930)
chr2 (25-115)||(15891275-15891371)
chr2 (279-372)||(26226569-26226662)
chr2 (54-115)||(15891525-15891586)
chr2 (22-116)||(27650304-27650404)
chr2 (293-372)||(20988973-20989050)
chr2 (293-372)||(12764096-12764175)
chr2 (298-372)||(5305230-5305303)
chr2 (124-185)||(28276819-28276880)
chr2 (319-372)||(28746118-28746171)
chr2 (328-372)||(26617138-26617182)
chr2 (309-372)||(26617272-26617333)
chr2 (293-352)||(20529349-20529408)
chr2 (116-167)||(20988735-20988786)
chr2 (187-265)||(18878853-18878931)
chr2 (54-115)||(16253897-16253958)
chr2 (125-185)||(28746878-28746939)
chr2 (129-181)||(11718990-11719042)
chr2 (388-436)||(20529219-20529267)
chr2 (131-185)||(18878741-18878795)
chr2 (214-260)||(20148849-20148895)
chr2 (293-355)||(31991672-31991734)
chr2 (384-437)||(26226722-26226775)
chr2 (384-437)||(28276229-28276282)
chr2 (329-372)||(11719101-11719142)
chr2 (125-185)||(18332787-18332847)
chr2 (293-368)||(18878853-18878926)
chr2 (212-260)||(20529360-20529408)
chr2 (325-372)||(28746780-28746825)
[»] chr6 (53 HSPs)
chr6 (187-438)||(17464844-17465102)
chr6 (195-355)||(14482544-14482704)
chr6 (195-339)||(23911371-23911515)
chr6 (195-355)||(20241848-20242008)
chr6 (195-355)||(22135832-22135992)
chr6 (195-355)||(22143185-22143345)
chr6 (22-123)||(28051597-28051698)
chr6 (281-372)||(19243338-19243429)
chr6 (117-185)||(30765002-30765070)
chr6 (281-372)||(30764533-30764622)
chr6 (281-372)||(21864340-21864431)
chr6 (117-185)||(17465160-17465228)
chr6 (54-115)||(20192585-20192646)
chr6 (54-115)||(20242008-20242069)
chr6 (54-115)||(22135992-22136053)
chr6 (54-115)||(22143345-22143406)
chr6 (291-372)||(20244736-20244821)
chr6 (291-372)||(22138720-22138805)
chr6 (125-185)||(24560042-24560102)
chr6 (126-185)||(3097432-3097491)
chr6 (64-115)||(20241794-20241845)
chr6 (64-115)||(22135778-22135829)
chr6 (64-115)||(22143131-22143182)
chr6 (281-372)||(24560359-24560450)
chr6 (293-359)||(18743569-18743635)
chr6 (127-185)||(21864814-21864872)
chr6 (281-368)||(33200913-33201004)
chr6 (279-372)||(3097104-3097197)
chr6 (116-185)||(18743895-18743964)
chr6 (293-352)||(23607796-23607855)
chr6 (384-434)||(20244881-20244931)
chr6 (384-434)||(22138865-22138915)
chr6 (116-185)||(2402417-2402486)
chr6 (116-185)||(14095858-14095927)
chr6 (54-115)||(14482479-14482540)
chr6 (22-112)||(34134880-34134975)
chr6 (200-260)||(14482546-14482606)
chr6 (309-372)||(24560157-24560218)
chr6 (125-185)||(33200341-33200400)
chr6 (383-437)||(3386356-3386410)
chr6 (60-114)||(4913681-4913735)
chr6 (391-437)||(14096332-14096378)
chr6 (192-266)||(20244532-20244606)
chr6 (192-266)||(22138516-22138590)
chr6 (212-262)||(23607794-23607844)
chr6 (266-296)||(28051738-28051768)
chr6 (195-260)||(20241845-20241910)
chr6 (195-260)||(22135829-22135894)
chr6 (195-260)||(22143182-22143247)
chr6 (293-372)||(2402539-2402616)
chr6 (293-341)||(22962042-22962090)
chr6 (293-341)||(23826303-23826351)
chr6 (397-437)||(30764420-30764460)
[»] chr1 (26 HSPs)
chr1 (200-355)||(16531553-16531708)
chr1 (200-339)||(5766083-5766220)
chr1 (200-339)||(18843044-18843183)
chr1 (279-372)||(27574807-27574898)
chr1 (293-372)||(48706478-48706557)
chr1 (281-363)||(11788727-11788809)
chr1 (116-185)||(19262332-19262401)
chr1 (288-372)||(27259840-27259922)
chr1 (301-372)||(27800227-27800298)
chr1 (281-358)||(19261996-19262074)
chr1 (126-185)||(11789065-11789124)
chr1 (317-372)||(22923328-22923383)
chr1 (294-372)||(26089138-26089216)
chr1 (54-115)||(14772291-14772352)
chr1 (310-372)||(19262217-19262277)
chr1 (389-436)||(27259987-27260034)
chr1 (187-265)||(19262195-19262273)
chr1 (293-350)||(16279038-16279095)
chr1 (200-257)||(16531555-16531612)
chr1 (54-115)||(31451799-31451860)
chr1 (397-437)||(27800367-27800407)
chr1 (293-372)||(15471989-15472068)
chr1 (65-115)||(16081724-16081774)
chr1 (214-260)||(18843137-18843183)
chr1 (116-185)||(21760307-21760376)
chr1 (116-167)||(48706840-48706892)
[»] chr3 (37 HSPs)
chr3 (200-339)||(6463825-6463964)
chr3 (213-339)||(6754818-6754944)
chr3 (224-355)||(25887067-25887198)
chr3 (227-343)||(20375351-20375467)
chr3 (246-355)||(14265669-14265778)
chr3 (287-372)||(50341938-50342023)
chr3 (293-371)||(17371364-17371442)
chr3 (295-372)||(29787814-29787891)
chr3 (281-372)||(20409341-20409432)
chr3 (291-372)||(29516647-29516728)
chr3 (283-337)||(7955224-7955278)
chr3 (316-372)||(29634493-29634549)
chr3 (294-368)||(1886225-1886299)
chr3 (295-372)||(1886342-1886417)
chr3 (116-185)||(1638526-1638595)
chr3 (291-372)||(55390504-55390585)
chr3 (293-372)||(11162602-11162681)
chr3 (116-183)||(17267210-17267277)
chr3 (187-262)||(20409554-20409629)
chr3 (195-260)||(14265716-14265781)
chr3 (388-437)||(17266750-17266799)
chr3 (316-372)||(17266862-17266916)
chr3 (293-377)||(20409556-20409638)
chr3 (195-260)||(25887064-25887129)
chr3 (384-437)||(29515666-29515719)
chr3 (125-185)||(50342542-50342602)
chr3 (293-372)||(25155935-25156013)
chr3 (187-262)||(50342409-50342484)
chr3 (214-260)||(6463825-6463871)
chr3 (214-260)||(6754898-6754944)
chr3 (212-258)||(29787845-29787891)
chr3 (293-342)||(6754816-6754865)
chr3 (195-260)||(20375336-20375401)
chr3 (78-115)||(25887491-25887528)
chr3 (216-260)||(7955234-7955278)
chr3 (22-54)||(27187834-27187866)
chr3 (336-372)||(29515778-29515814)
[»] chr7 (63 HSPs)
chr7 (54-264)||(11824914-11825121)
chr7 (187-372)||(18149898-18150083)
chr7 (201-355)||(1642053-1642207)
chr7 (260-384)||(3380317-3380441)
chr7 (26-167)||(3380502-3380650)
chr7 (239-339)||(4230130-4230230)
chr7 (267-372)||(11826436-11826541)
chr7 (281-368)||(5281780-5281867)
chr7 (286-368)||(150657-150739)
chr7 (292-364)||(23553938-23554010)
chr7 (187-277)||(150459-150549)
chr7 (281-372)||(12083605-12083694)
chr7 (293-372)||(41934916-41934995)
chr7 (283-339)||(21614000-21614056)
chr7 (48-120)||(5282334-5282406)
chr7 (200-255)||(1642055-1642110)
chr7 (286-372)||(28067614-28067698)
chr7 (116-189)||(28066475-28066548)
chr7 (22-115)||(21614451-21614549)
chr7 (187-265)||(31267423-31267501)
chr7 (116-189)||(3924964-3925037)
chr7 (116-189)||(27317734-27317807)
chr7 (293-372)||(3925280-3925356)
chr7 (185-265)||(28066601-28066681)
chr7 (293-368)||(28066603-28066676)
chr7 (293-372)||(41935144-41935221)
chr7 (193-232)||(3380440-3380479)
chr7 (293-352)||(29656278-29656337)
chr7 (22-89)||(150315-150388)
chr7 (293-347)||(5282126-5282180)
chr7 (135-185)||(5282206-5282256)
chr7 (293-355)||(7414000-7414062)
chr7 (116-189)||(7066877-7066950)
chr7 (200-265)||(7413995-7414060)
chr7 (116-185)||(7414119-7414188)
chr7 (116-185)||(12083151-12083220)
chr7 (48-89)||(18149787-18149828)
chr7 (384-437)||(28009283-28009336)
chr7 (293-368)||(16886289-16886362)
chr7 (293-368)||(31267423-31267496)
chr7 (300-372)||(7067225-7067299)
chr7 (213-260)||(23553939-23553986)
chr7 (388-434)||(12083758-12083804)
chr7 (214-260)||(21614000-21614046)
chr7 (388-437)||(3925436-3925485)
chr7 (213-266)||(5282120-5282173)
chr7 (388-437)||(7413577-7413626)
chr7 (335-372)||(7413688-7413725)
chr7 (213-262)||(16651130-16651179)
chr7 (116-185)||(16886421-16886490)
chr7 (213-262)||(17625490-17625539)
chr7 (295-336)||(18776317-18776358)
chr7 (217-258)||(18776317-18776358)
chr7 (213-262)||(29656276-29656325)
chr7 (116-185)||(31267296-31267365)
chr7 (200-260)||(5281795-5281855)
chr7 (317-372)||(7067001-7067054)
chr7 (293-368)||(11825044-11825117)
chr7 (22-54)||(15337571-15337603)
chr7 (293-341)||(16651132-16651180)
chr7 (324-372)||(16886098-16886146)
chr7 (293-341)||(17625492-17625540)
chr7 (296-352)||(36338036-36338092)
[»] chr8 (22 HSPs)
chr8 (297-370)||(24629500-24629573)
chr8 (293-372)||(12504432-12504511)
chr8 (286-372)||(22842885-22842971)
chr8 (22-115)||(31171697-31171795)
chr8 (281-372)||(10205123-10205214)
chr8 (293-372)||(12784751-12784830)
chr8 (290-372)||(32123826-32123908)
chr8 (116-185)||(27783668-27783737)
chr8 (293-372)||(12784966-12785043)
chr8 (320-372)||(26140733-26140785)
chr8 (296-352)||(32108484-32108540)
chr8 (388-437)||(10205278-10205327)
chr8 (125-181)||(10204802-10204858)
chr8 (397-437)||(29370353-29370393)
chr8 (116-167)||(12504690-12504741)
chr8 (386-437)||(26140847-26140898)
chr8 (293-352)||(29370555-29370614)
chr8 (50-120)||(3009560-3009630)
chr8 (54-115)||(3589145-3589206)
chr8 (388-437)||(24629385-24629434)
chr8 (116-181)||(26140372-26140437)
chr8 (388-437)||(27784142-27784191)
[»] scaffold0015 (2 HSPs)
scaffold0015 (293-372)||(22227-22306)
scaffold0015 (187-262)||(22441-22516)
[»] scaffold0027 (2 HSPs)
scaffold0027 (293-372)||(37012-37089)
scaffold0027 (187-372)||(37016-37207)
[»] scaffold0086 (1 HSPs)
scaffold0086 (295-352)||(45994-46051)
[»] scaffold0121 (2 HSPs)
scaffold0121 (293-343)||(5908-5958)
scaffold0121 (293-372)||(5693-5770)


Alignment Details
Target: chr5 (Bit Score: 373; Significance: 0; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 373; E-Value: 0
Query Start/End: Original strand, 22 - 438
Target Start/End: Complemental strand, 13131061 - 13130645
Alignment:
Q  22 aactacaacaattgtcttacctctgaataaggtcaaacctgttaaacaacagctctcaagcattcaccttgaagttttattgttcctttcaaaaattagg 121  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  13131061 aactacaacaattgtcttacctctgaataaggtcaaacttgttaaacaacgactctcaagcattcaccttgaagttttattgttcctttcaaaaattagg 13130962  T
Q  122 taatgtctttattttgttggagtttaaattaaattcttgttagtttactaaagatgttggtattaaagacaacacaaaatgtattatgcagaatcaacta 221  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  13130961 taatgtctttattttgttggagtttaaattaaattcttgttagtttgctgaagatgttggtattaaagacaacacaacatgtattatgcagaatcaacta 13130862  T
Q  222 tataagttatgatatcaaattccttcatataagatgagtgtcacagaatgcacctcattctttatgtgatgactcatcttatatgagggaatttgatgtg 321  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  13130861 tataagttatgatatcaaattccttcatataagattagtgtcacagaatgcacctcattctttatgtgatgactcgtcttatatgaggaaatttgatgtg 13130762  T
Q  322 ataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatttttgtaagacacaatattttcagtaaactttcaagaatttaatttaaat 421  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  13130761 atagcatatatagttgattttgtagaatacatgtgttgtgttctcttcattcttgtaagacacaatattttcagtaaactttcaagaatttaatttaaat 13130662  T
Q  422 ccagcatcatgatgatg 438  Q
    |||||||||||||||||    
T  13130661 ccagcatcatgatgatg 13130645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 200 - 340
Target Start/End: Original strand, 18921119 - 18921259
Alignment:
Q  200 atgtattatgcagaatcaactatataagttatgatatcaaattccttcatataagatgagtgtcacagaatgcacctcattctttatgtgatgactcatc 299  Q
    |||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| ||    
T  18921119 atgtattatgcagaatcagctatataagttatgatattgaattccttcatataagatgagtgtcacagaatgcacctcattctctatgtgattactcgtc 18921218  T
Q  300 ttatatgagggaatttgatgtgataacatatatagttgatt 340  Q
    ||||||||||||| | ||||||||||||||| ||| |||||    
T  18921219 ttatatgagggaaatcgatgtgataacatatgtagctgatt 18921259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 200 - 339
Target Start/End: Original strand, 10398378 - 10398517
Alignment:
Q  200 atgtattatgcagaatcaactatataagttatgatatcaaattccttcatataagatgagtgtcacagaatgcacctcattctttatgtgatgactcatc 299  Q
    |||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||| |||||||||||| |||| ||    
T  10398378 atgtattattgagaatcaactatataagttatgatatcgaattccttcatataagatgagtgtcacgaaatgcacctcaatctttatgtgatcactcgtc 10398477  T
Q  300 ttatatgagggaatttgatgtgataacatatatagttgat 339  Q
    |||| |||  ||||||||||||||||||||||||||||||    
T  10398478 ttatttgaatgaatttgatgtgataacatatatagttgat 10398517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 22 - 185
Target Start/End: Complemental strand, 25360566 - 25360397
Alignment:
Q  22 aactacaacaattgtcttacctctgaa------taaggtcaaacctgttaaacaacagctctcaagcattcaccttgaagttttattgttcctttcaaaa 115  Q
    |||||||||||||||||||| |||| |      |||||||||||||||||||||||| |||||| |||||||||  |||||| |||||||||||||||||    
T  25360566 aactacaacaattgtcttacatctggaattggataaggtcaaacctgttaaacaacaactctcatgcattcacccagaagttctattgttcctttcaaaa 25360467  T
Q  116 attaggtaatgtctttattttgttggagtttaaattaaattcttgttagtttactaaagatgttggtatt 185  Q
    |||||||| |||| ||||| ||||||| |||||||||||||||||||||||| || ||||||||||||||    
T  25360466 attaggtagtgtccttattctgttggaatttaaattaaattcttgttagtttgctgaagatgttggtatt 25360397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 22 - 277
Target Start/End: Complemental strand, 36311928 - 36311670
Alignment:
Q  22 aactacaacaattgtcttacctctgaa------taaggtcaaacctgttaaacaacagctctcaagcattcaccttgaagttttattgttcctttcaaaa 115  Q
    |||||||||||||||||||||||||||      ||||||||||| |||||||||||| || | |||| |||| |   || || |||||||||||||||||    
T  36311928 aactacaacaattgtcttacctctgaaattggataaggtcaaacttgttaaacaacaactttgaagccttcatccgtaaattctattgttcctttcaaaa 36311829  T
Q  116 attaggtaatgtctttattttgttggagtttaaattaaattcttgttagtttactaaagatgttggtattaaagacaacacaaaatgtattatgcagaat 215  Q
    |||||||| |||||||||||||||||| |||||| |||||||||||||||||   |||  |      ||| |||| ||||||| ||||||| |||| |||    
T  36311828 attaggtagtgtctttattttgttggaatttaaaataaattcttgttagttt--gaaaagtcaaaagatt-aagagaacacaacatgtattctgcataat 36311732  T
Q  216 caactatataagttatgatatcaaattccttcatataagatgagtgtcacagaatgcacctc 277  Q
    ||  |||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||    
T  36311731 cagttatataagttatgatatcaaattccttcgtataagattagtgtcacagaattcacctc 36311670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 281 - 372
Target Start/End: Complemental strand, 36311567 - 36311476
Alignment:
Q  281 ctttatgtgatgactcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    ||||||||||||||||||||||||||| |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36311567 ctttatgtgatgactcatcttatatgaaggaattcgatgtcataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 36311476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 195 - 296
Target Start/End: Original strand, 12743628 - 12743729
Alignment:
Q  195 acaaaatgtattatgcagaatcaactatataagttatgatatcaaattccttcatataagatgagtgtcacagaatgcacctcattctttatgtgatgac 294  Q
    |||| |||||||||||| ||||| ||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  12743628 acaacatgtattatgcaaaatcagctatatacgttatgatatcgaattccttcatataagatgagtgtcacggaatgcacctcattctttatgtgatgac 12743727  T
Q  295 tc 296  Q
    ||    
T  12743728 tc 12743729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 195 - 296
Target Start/End: Original strand, 12806449 - 12806550
Alignment:
Q  195 acaaaatgtattatgcagaatcaactatataagttatgatatcaaattccttcatataagatgagtgtcacagaatgcacctcattctttatgtgatgac 294  Q
    |||| |||||||||||| ||||| ||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  12806449 acaacatgtattatgcaaaatcagctatatacgttatgatatcgaattccttcatataagatgagtgtcacggaatgcacctcattctttatgtgatgac 12806548  T
Q  295 tc 296  Q
    ||    
T  12806549 tc 12806550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 281 - 372
Target Start/End: Complemental strand, 16417764 - 16417673
Alignment:
Q  281 ctttatgtgatgactcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    |||| ||| ||||||||||||||||||||||||| ||||||| ||| ||||| |||||||| ||||||||||||||||||||||||||||||    
T  16417764 ctttttgtcatgactcatcttatatgagggaattcgatgtgagaacttatattgttgatttggtagaatacatgtgttgtgttctcttcatt 16417673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 293 - 372
Target Start/End: Original strand, 31488537 - 31488616
Alignment:
Q  293 actcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    |||||||||||||||||||||| ||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||    
T  31488537 actcatcttatatgagggaattcgatgtgataacctatattcttgattttgtagaatacatgtgttgtgttctcttcatt 31488616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 22 - 121
Target Start/End: Complemental strand, 17195342 - 17195237
Alignment:
Q  22 aactacaacaattgtcttacctctgaa------taaggtcaaacctgttaaacaacagctctcaagcattcaccttgaagttttattgttcctttcaaaa 115  Q
    |||||||||||||||||||||| ||||      ||||||||||||| |||||||||| ||||||||||||||||  ||||||||||||||||||||||||    
T  17195342 aactacaacaattgtcttacctttgaaattggataaggtcaaacctattaaacaacaactctcaagcattcacccagaagttttattgttcctttcaaaa 17195243  T
Q  116 attagg 121  Q
    ||||||    
T  17195242 attagg 17195237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 200 - 312
Target Start/End: Complemental strand, 17366350 - 17366239
Alignment:
Q  200 atgtattatgcagaatcaactatataagttatgatatcaaattccttcatataagatgagtgtcacagaatgcacctcattctttatgtgatgactcatc 299  Q
    |||||||||  ||||| | |||||||| |||||||||| |||||||||||||| |||||||||||| |||||||||||| | |||||||||| |||| ||    
T  17366350 atgtattattgagaattagctatataaattatgatatcgaattccttcatatacgatgagtgtcacggaatgcacctcagt-tttatgtgattactcgtc 17366252  T
Q  300 ttatatgagggaa 312  Q
    |||||||| ||||    
T  17366251 ttatatgaaggaa 17366239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 284 - 368
Target Start/End: Complemental strand, 23228269 - 23228185
Alignment:
Q  284 tatgtgatgactcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctctt 368  Q
    ||||||||||||||||||||||||||||||| ||||||| ||  ||||||||||||||  ||||||| |||||||||||||||||    
T  23228269 tatgtgatgactcatcttatatgagggaattcgatgtgagaatttatatagttgatttgatagaataaatgtgttgtgttctctt 23228185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 293 - 372
Target Start/End: Original strand, 10976365 - 10976444
Alignment:
Q  293 actcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    |||||||| |||||||| |||| ||||||||||| |||||||||||||| |||||||||| |||||||||| ||||||||    
T  10976365 actcatctaatatgaggaaattcgatgtgataacctatatagttgatttggtagaatacaagtgttgtgttatcttcatt 10976444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 293 - 372
Target Start/End: Original strand, 19748523 - 19748600
Alignment:
Q  293 actcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    |||||||||||||||||||||||||||| | ||  ||||||| ||||||||||||||||||||||  |||||||||||||    
T  19748523 actcatcttatatgagggaatttgatgtaaaaatctatatagatgattttgtagaatacatgtgt--tgttctcttcatt 19748600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 283 - 339
Target Start/End: Original strand, 33371562 - 33371618
Alignment:
Q  283 ttatgtgatgactcatcttatatgagggaatttgatgtgataacatatatagttgat 339  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  33371562 ttatgtgatgactcgtcttatatgaaggaatttgatgtgataacatatatagttgat 33371618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 22 - 115
Target Start/End: Complemental strand, 12806043 - 12805944
Alignment:
Q  22 aactacaacaattgtcttacctctgaa------taaggtcaaacctgttaaacaacagctctcaagcattcaccttgaagttttattgttcctttcaaaa 115  Q
    |||||||||||||||||||||||||||      |||  |||||| || |||||||||||||||||||||||||||| || ||||||| |||| |||||||    
T  12806043 aactacaacaattgtcttacctctgaaatgtggtaaattcaaacttgctaaacaacagctctcaagcattcacctttaatttttattattccattcaaaa 12805944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 22 - 115
Target Start/End: Original strand, 18920958 - 18921056
Alignment:
Q  22 aactacaacaattgtcttacctctgaa------taaggtcaaacctgttaaacaacagctctcaagcattcaccttgaagttttattgttcctttcaaaa 115  Q
    |||||||||||||||||||| | ||||      ||||||||| |||||||||||||||||||||||||||||||   |||||||||||| ||||||||||    
T  18920958 aactacaacaattgtcttacttgtgaaattggataaggtcaa-cctgttaaacaacagctctcaagcattcacccgaaagttttattgtgcctttcaaaa 18921056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 293 - 372
Target Start/End: Original strand, 34595768 - 34595848
Alignment:
Q  293 actcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatac-atgtgttgtgttctcttcatt 372  Q
    ||||||||||||||| |||||| ||||||| ||| |||||||||||||| ||||||||| | |||||||| ||||||||||    
T  34595768 actcatcttatatgaaggaattcgatgtgaaaacttatatagttgatttggtagaatacaaagtgttgtgctctcttcatt 34595848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 293 - 372
Target Start/End: Complemental strand, 6998671 - 6998592
Alignment:
Q  293 actcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    ||||||||||||||| ||| || ||||||| ||| |||| ||||||||| |||||||||||||||| ||| |||||||||    
T  6998671 actcatcttatatgatggagttcgatgtgaaaacctataaagttgatttggtagaatacatgtgttatgtgctcttcatt 6998592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 54 - 104
Target Start/End: Complemental strand, 18921401 - 18921351
Alignment:
Q  54 tcaaacctgttaaacaacagctctcaagcattcaccttgaagttttattgt 104  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  18921401 tcaaacctgctaaacaacagctctcaagcattcacctggaagttttattgt 18921351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 293 - 366
Target Start/End: Complemental strand, 7575751 - 7575678
Alignment:
Q  293 actcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctc 366  Q
    |||||||||||||||||||||| ||||  | || || |||||||| ||| ||||||||||||||||||||||||    
T  7575751 actcatcttatatgagggaattcgatgctagaaaatgtatagttggtttggtagaatacatgtgttgtgttctc 7575678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 19748284 - 19748353
Alignment:
Q  116 attaggtaatgtctttattttgttggagtttaaattaaattcttgttagtttactaaagatgttggtatt 185  Q
    |||| ||| |||||||||||||||||| ||||| || ||||||||||||||| || ||||||||||||||    
T  19748284 attatgtattgtctttattttgttggaatttaactttaattcttgttagtttgctgaagatgttggtatt 19748353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 22 - 115
Target Start/End: Complemental strand, 12743225 - 12743126
Alignment:
Q  22 aactacaacaattgtcttacctctgaa------taaggtcaaacctgttaaacaacagctctcaagcattcaccttgaagttttattgttcctttcaaaa 115  Q
    |||||||||||||||||||||||||||      |||  |||||| || ||||||||| |||||||||||||||||| || ||||||| |||| |||||||    
T  12743225 aactacaacaattgtcttacctctgaaatgtggtaaattcaaacttgctaaacaacaactctcaagcattcacctttaatttttattattccattcaaaa 12743126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 293 - 372
Target Start/End: Original strand, 25360265 - 25360342
Alignment:
Q  293 actcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    ||||||||||||  |||||||| ||||||| ||| ||||||| |||||||| ||||||||  ||||||||||||||||||    
T  25360265 actcatcttatacaagggaattcgatgtgaaaacctatatagatgattttgcagaataca--tgttgtgttctcttcatt 25360342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 295 - 372
Target Start/End: Complemental strand, 25360224 - 25360149
Alignment:
Q  295 tcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    ||||||||||||||| |||| | ||||| ||| ||||||| |||||||||| |||||||||||  |||||||||||||    
T  25360224 tcatcttatatgaggaaattcgttgtgaaaacctatatagatgattttgtataatacatgtgt--tgttctcttcatt 25360149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 22 - 115
Target Start/End: Complemental strand, 33371167 - 33371069
Alignment:
Q  22 aactacaacaattgtcttacctctgaataaggt-----caaacctgttaaacaacagctctcaagcattcaccttgaagttttattgttcctttcaaaa 115  Q
    ||||||||||||| |||||||| ||||| ||||     ||||| ||| ||||||||||||||||||||||||   |||||||||||||| | |||||||    
T  33371167 aactacaacaattatcttacctttgaatgaggtaaattcaaacttgtcaaacaacagctctcaagcattcactcggaagttttattgtttcattcaaaa 33371069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 54 - 115
Target Start/End: Original strand, 2599514 - 2599575
Alignment:
Q  54 tcaaacctgttaaacaacagctctcaagcattcaccttgaagttttattgttcctttcaaaa 115  Q
    |||||| || ||||||||||||||||||| ||||||   |||||||||||||||||||||||    
T  2599514 tcaaacttgctaaacaacagctctcaagcgttcacccaaaagttttattgttcctttcaaaa 2599575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 279 - 372
Target Start/End: Complemental strand, 8531855 - 8531762
Alignment:
Q  279 ttctttatgtgatgactcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    |||||| |||||| ||||||  |||| ||||||||| ||||||| ||  |||| ||||||||   ||||||| |||||||||||||||||||||    
T  8531855 ttctttgtgtgattactcattgtatacgagggaattcgatgtgagaatctataaagttgattcgatagaatatatgtgttgtgttctcttcatt 8531762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 293 - 372
Target Start/End: Complemental strand, 10976228 - 10976151
Alignment:
Q  293 actcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    ||||||||||||  |||||||| |||| || |||||||||||||||||| ||| ||||||   |||||||||||||||||    
T  10976228 actcatcttatacaagggaattcgatgcgaaaacatatatagttgatttggtaaaataca--agttgtgttctcttcatt 10976151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 200 - 260
Target Start/End: Original strand, 36311495 - 36311555
Alignment:
Q  200 atgtattatgcagaatcaactatataagttatgatatcaaattccttcatataagatgagt 260  Q
    ||||||| | || ||||||||||||| ||||||| ||| ||||||||||||||||||||||    
T  36311495 atgtattctacaaaatcaactatatatgttatgacatcgaattccttcatataagatgagt 36311555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 293 - 372
Target Start/End: Complemental strand, 11477552 - 11477473
Alignment:
Q  293 actcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    |||||||||||| ||  |||||  |||||| ||| ||||| |||||||  |||||||||||||| |||||||||||||||    
T  11477552 actcatcttatacgaatgaattcaatgtgagaacctatattgttgattcggtagaatacatgtgatgtgttctcttcatt 11477473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 12743294 - 12743348
Alignment:
Q  195 acaaaatgtattatgcagaatcaactatataagttatgatatcaaattccttcat 249  Q
    |||| |||||||||||| ||||| ||||||| ||||||||||| |||||||||||    
T  12743294 acaacatgtattatgcaaaatcagctatatacgttatgatatcgaattccttcat 12743348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 12806113 - 12806167
Alignment:
Q  195 acaaaatgtattatgcagaatcaactatataagttatgatatcaaattccttcat 249  Q
    |||| |||||||||||| ||||| ||||||| ||||||||||| |||||||||||    
T  12806113 acaacatgtattatgcaaaatcagctatatacgttatgatatcgaattccttcat 12806167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 293 - 355
Target Start/End: Complemental strand, 19748484 - 19748422
Alignment:
Q  293 actcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgt 355  Q
    ||||||||||||  |||||||| ||||||| ||| ||||||| |||||||| |||||||||||    
T  19748484 actcatcttatacaagggaattcgatgtgaaaacctatatagctgattttgcagaatacatgt 19748422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 397 - 437
Target Start/End: Complemental strand, 15794751 - 15794711
Alignment:
Q  397 aaactttcaagaatttaatttaaatccagcatcatgatgat 437  Q
    ||||||||||||||| |||||||||||| ||||||||||||    
T  15794751 aaactttcaagaattaaatttaaatccaacatcatgatgat 15794711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 89
Target Start/End: Original strand, 17366400 - 17366472
Alignment:
Q  22 aactacaacaattgtcttacctctgaataagg-----tcaaacctgttaaacaacagctctcaagcattcacc 89  Q
    ||||||||||||| |||||||||||||| |||     |||||| || |||||| |||||||||||||||||||    
T  17366400 aactacaacaattatcttacctctgaatgaggtaaattcaaacttgctaaacatcagctctcaagcattcacc 17366472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 397 - 437
Target Start/End: Original strand, 19575845 - 19575885
Alignment:
Q  397 aaactttcaagaatttaatttaaatccagcatcatgatgat 437  Q
    ||||||||| |||||||||||||||||| ||||||||||||    
T  19575845 aaactttcatgaatttaatttaaatccaacatcatgatgat 19575885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 125 - 185
Target Start/End: Complemental strand, 23228651 - 23228591
Alignment:
Q  125 tgtctttattttgttggagtttaaattaaattcttgttagtttactaaagatgttggtatt 185  Q
    |||||||||||||||||| ||||| || |||||||||| |||| || ||||||||| ||||    
T  23228651 tgtctttattttgttggaatttaagtttaattcttgtttgtttgctgaagatgttgatatt 23228591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 189
Target Start/End: Original strand, 31488206 - 31488273
Alignment:
Q  122 taatgtctttattttgttggagtttaaattaaattcttgttagtttactaaagatgttggtattaaag 189  Q
    ||||||||||||||||||| | ||||| || ||||||||||||||| || || |||| || |||||||    
T  31488206 taatgtctttattttgttgaaatttaagtttaattcttgttagtttgctgaatatgtcggcattaaag 31488273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 260
Target Start/End: Complemental strand, 34595815 - 34595768
Alignment:
Q  213 aatcaactatataagttatgatatcaaattccttcatataagatgagt 260  Q
    ||||||||||||||||| | | ||| ||||||||||||||||||||||    
T  34595815 aatcaactatataagttttcacatcgaattccttcatataagatgagt 34595768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 293 - 355
Target Start/End: Complemental strand, 12743693 - 12743631
Alignment:
Q  293 actcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgt 355  Q
    ||||||||||||||| |||||| ||| | ||||| ||||||| |||||||| | |||||||||    
T  12743693 actcatcttatatgaaggaattcgatatcataacgtatatagctgattttgcataatacatgt 12743631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 293 - 355
Target Start/End: Complemental strand, 12806514 - 12806452
Alignment:
Q  293 actcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgt 355  Q
    ||||||||||||||| |||||| ||| | ||||| ||||||| |||||||| | |||||||||    
T  12806514 actcatcttatatgaaggaattcgatatcataacgtatatagctgattttgcataatacatgt 12806452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 297 - 355
Target Start/End: Original strand, 13130827 - 13130885
Alignment:
Q  297 atcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgt 355  Q
    ||||||||||| |||||||||| | ||||| ||||||||||||| || | |||||||||    
T  13130827 atcttatatgaaggaatttgatatcataacttatatagttgattctgcataatacatgt 13130885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 28718283 - 28718353
Alignment:
Q  116 attaggtaatgtctttattttgttggagtttaaatta-aattcttgttagtttactaaagatgttggtatt 185  Q
    |||| ||| ||| |||||||||||||| ||||| ||  ||||||||||||||| || ||||||||||||||    
T  28718283 attatgtagtgtttttattttgttggaatttaagttttaattcttgttagtttgctgaagatgttggtatt 28718353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 293 - 355
Target Start/End: Original strand, 31238508 - 31238570
Alignment:
Q  293 actcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgt 355  Q
    ||||||||||||||||  |||| ||||||| ||| |||| ||||||||  |||||||||||||    
T  31238508 actcatcttatatgagttaattcgatgtgaaaacctataaagttgattcggtagaatacatgt 31238570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 214 - 260
Target Start/End: Complemental strand, 33371618 - 33371572
Alignment:
Q  214 atcaactatataagttatgatatcaaattccttcatataagatgagt 260  Q
    |||||||||||| ||||| | ||||||||||||||||||||| ||||    
T  33371618 atcaactatatatgttatcacatcaaattccttcatataagacgagt 33371572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 387 - 437
Target Start/End: Original strand, 34595911 - 34595961
Alignment:
Q  387 tattttcagtaaactttcaagaatttaatttaaatccagcatcatgatgat 437  Q
    |||||||  |||||||| ||||||||||||||||| || ||||||||||||    
T  34595911 tattttcgataaacttttaagaatttaatttaaattcaacatcatgatgat 34595961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 437
Target Start/End: Original strand, 19748664 - 19748713
Alignment:
Q  388 attttcagtaaactttcaagaatttaatttaaatccagcatcatgatgat 437  Q
    |||||| | ||||||||||||||| ||||||||||||  |||||||||||    
T  19748664 attttcggaaaactttcaagaattaaatttaaatccaaaatcatgatgat 19748713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 437
Target Start/End: Complemental strand, 26604114 - 26604065
Alignment:
Q  388 attttcagtaaactttcaagaatttaatttaaatccagcatcatgatgat 437  Q
    |||||| ||||||||||| |||||||||||||||||  ||||||| ||||    
T  26604114 attttcggtaaactttcatgaatttaatttaaatcctacatcatgttgat 26604065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 437
Target Start/End: Complemental strand, 36311412 - 36311363
Alignment:
Q  388 attttcagtaaactttcaagaatttaatttaaatccagcatcatgatgat 437  Q
    |||||| | ||||||| |||||||||||||||||||| |||| |||||||    
T  36311412 attttctgcaaacttttaagaatttaatttaaatccaacatcctgatgat 36311363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 294 - 377
Target Start/End: Original strand, 7575889 - 7575970
Alignment:
Q  294 ctcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatttttgt 377  Q
    ||||||||||  || |||||| ||||||| ||| ||||||||||||||   | ||||||  |||||||||||||||||| ||||    
T  7575889 ctcatcttatgcgaaggaattcgatgtgagaacctatatagttgatttgacaaaataca--tgttgtgttctcttcattcttgt 7575970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 116 - 188
Target Start/End: Original strand, 10976027 - 10976099
Alignment:
Q  116 attaggtaatgtctttattttgttggagtttaaattaaattcttgttagtttactaaagatgttggtattaaa 188  Q
    |||| ||| |||||||||||||||||| ||||| || ||||| ||  ||||| || ||||||||| |||||||    
T  10976027 attatgtagtgtctttattttgttggaatttaagtttaattcatgaaagtttgctgaagatgttgttattaaa 10976099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 384 - 420
Target Start/End: Complemental strand, 16417613 - 16417577
Alignment:
Q  384 caatattttcagtaaactttcaagaatttaatttaaa 420  Q
    ||||||||| || ||||||||||||||||||||||||    
T  16417613 caatattttgagcaaactttcaagaatttaatttaaa 16417577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 293 - 372
Target Start/End: Original strand, 16417889 - 16417966
Alignment:
Q  293 actcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    |||||||||||| || ||||||  |||| | ||| ||||||||| |||| ||| ||||||  ||||||||||||||||||    
T  16417889 actcatcttatacgaaggaattcaatgtaaaaacctatatagttaatttggtaaaataca--tgttgtgttctcttcatt 16417966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 293 - 341
Target Start/End: Original strand, 19575695 - 19575743
Alignment:
Q  293 actcatcttatatgagggaatttgatgtgataacatatatagttgattt 341  Q
    |||||||||||||||  ||||||||||||| | ||| ||||||||||||    
T  19575695 actcatcttatatgaatgaatttgatgtgagagcatgtatagttgattt 19575743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 266; Significance: 1e-148; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 22 - 438
Target Start/End: Original strand, 17292187 - 17292610
Alignment:
Q  22 aactacaacaattgtcttacctctgaataaggtcaaacctgttaaacaacagctctcaagcattcaccttgaagttttattgttcctttcaaaaattagg 121  Q
    ||||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||  |||||| |||||||| |||||||||| |||    
T  17292187 aactacaacaattgttttacctctgaa-aaggtcaaacctattaaacaacagctctcaagcattcacccggaagttctattgttcttttcaaaaat-agg 17292284  T
Q  122 taatgtctttattttgttggagtttaaattaaattcttgttagtttactaaagatgttggtattaaagacaacacaaaatgtattatgcagaatcaacta 221  Q
    || |||||||||||||||||| |||||||||||||||||||||||| || |||||| ||||||| |||| ||||||| ||||||||||||||||||||||    
T  17292285 tagtgtctttattttgttggaatttaaattaaattcttgttagtttgctgaagatgatggtattcaagagaacacaacatgtattatgcagaatcaacta 17292384  T
Q  222 tataagttatgatatcaaattccttcatataagatgagtgtcacagaatgcacctcattctttatgtgatgactcatcttatatgagggaatttgatgtg 321  Q
    | |||||||||||||| | ||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||    
T  17292385 tgtaagttatgatatcgagttccttcatataagatgagtgtcatggaatgcacctcattctttatgtgatgactcgtcttatatgagggaattcgatttg 17292484  T
Q  322 ataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatttttgtaagaca---------caatattttcagtaaactttcaagaattt 412  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| || |||||||         |||||||||||||||||||||||||||||    
T  17292485 ataacatatatagttgattttgtagaatacatgtattgtgttctcttcattcttataagacactttagtgccaatattttcagtaaactttcaagaattt 17292584  T
Q  413 aatttaaatccagcatcatgatgatg 438  Q
    || ||||||||| |||||| ||||||    
T  17292585 aaattaaatccaacatcatcatgatg 17292610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 187 - 438
Target Start/End: Complemental strand, 24576772 - 24576512
Alignment:
Q  187 aagacaacacaaaatgtattatgcagaatcaactatataagttatgatatcaaattccttcatataagatgagtgtcacagaatgcacctcattctttat 286  Q
    |||| ||||||| |||||||||||| ||||| ||||| ||||||| ||||| ||||||||||||||||||||||||||| || ||||||| ||| |||||    
T  24576772 aagagaacacaacatgtattatgcataatcagctatagaagttataatatcgaattccttcatataagatgagtgtcacggactgcaccttattttttat 24576673  T
Q  287 gtgatgactcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatttttgtaagaca--- 383  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || |||||||       
T  24576672 gtgatgactcgtcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatatgttgtgttctcttcattcttataagacactt 24576573  T
Q  384 ------caatattttcagtaaactttcaagaatttaatttaaatccagcatcatgatgatg 438  Q
          ||||||||||||||||||||||| |||| |||||||||||| |||||||||||||    
T  24576572 tagtgccaatattttcagtaaactttcaaaaattcaatttaaatccaacatcatgatgatg 24576512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 209 - 353
Target Start/End: Original strand, 18413142 - 18413286
Alignment:
Q  209 gcagaatcaactatataagttatgatatcaaattccttcatataagatgagtgtcacagaatgcacctcattctttatgtgatgactcatcttatatgag 308  Q
    ||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  18413142 gcagaatcaactatataagatatgatattgaattccttcatataagatgagtgtcacggaatgcacctcattctttatgtgatgactcgtcttatatgag 18413241  T
Q  309 ggaatttgatgtgataacatatatagttgattttgtagaatacat 353  Q
    ||||||||||||||||||||||||||||||||||| | |||||||    
T  18413242 ggaatttgatgtgataacatatatagttgattttgcataatacat 18413286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 195 - 355
Target Start/End: Original strand, 13866587 - 13866748
Alignment:
Q  195 acaaaatgtattatgcagaatcaactatataagttatgatatcaaattccttcat-ataagatgagtgtcacagaatgcacctcattctttatgtgatga 293  Q
    |||| ||||||||||||||||| |||||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  13866587 acaacatgtattatgcagaatccactatataagttatgatatcgaattccttccttataagatgagtgtcacagaatgcacctcattctttatgtgatga 13866686  T
Q  294 ctcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgt 355  Q
    ||| |||||||||||| |||| ||||||||||||||||||||||||| || | |||||||||    
T  13866687 ctcgtcttatatgaggaaattcgatgtgataacatatatagttgattctgcataatacatgt 13866748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 195 - 339
Target Start/End: Original strand, 3393911 - 3394055
Alignment:
Q  195 acaaaatgtattatgcagaatcaactatataagttatgatatcaaattccttcatataagatgagtgtcacagaatgcacctcattctttatgtgatgac 294  Q
    |||| ||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  3393911 acaacatgtattatgccgaatcaactatgtaagttatgatatcgaattccttcatataagatgagtgtcacggaatgcacctcattctttatgtgatgac 3394010  T
Q  295 tcatcttatatgagggaatttgatgtgataacatatatagttgat 339  Q
    || |||| ||||| |||||||||||||||||||||||||||||||    
T  3394011 tcgtcttttatgaaggaatttgatgtgataacatatatagttgat 3394055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 195 - 355
Target Start/End: Original strand, 31324497 - 31324657
Alignment:
Q  195 acaaaatgtattatgcagaatcaactatataagttatgatatcaaattccttcatataagatgagtgtcacagaatgcacctcattctttatgtgatgac 294  Q
    |||| ||||||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  31324497 acaacatgtattattcaaaatcaactatataagttatgatatcaaatttcttcatataagatgagtgtcctagaatgcacctcattctttatgtgatgac 31324596  T
Q  295 tcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgt 355  Q
    |||||||||| ||| ||||| ||| ||||||||||||||||||||| || | |||||||||    
T  31324597 tcatcttatacgagagaattcgatatgataacatatatagttgattctgcataatacatgt 31324657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 224 - 355
Target Start/End: Original strand, 9717935 - 9718066
Alignment:
Q  224 taagttatgatatcaaattccttcatataagatgagtgtcacagaatgcacctcattctttatgtgatgactcatcttatatgagggaatttgatgtgat 323  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||    
T  9717935 taagttatgatatcgaattccttcatataagatgagtgtcacagaatgcacctcattctttatgtgatgacccgtcttatatgagagaatttgatgtgat 9718034  T
Q  324 aacatatatagttgattttgtagaatacatgt 355  Q
    ||||||||||||||||| || | |||||||||    
T  9718035 aacatatatagttgattctgcataatacatgt 9718066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 200 - 336
Target Start/End: Original strand, 17211882 - 17212018
Alignment:
Q  200 atgtattatgcagaatcaactatataagttatgatatcaaattccttcatataagatgagtgtcacagaatgcacctcattctttatgtgatgactcatc 299  Q
    |||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||  ||    
T  17211882 atgtattattgagaatcagctatataagttatgatatcaaattccttcatataagatgagtgtcacggaatgcacctcattctttgtgtgatgacttgtc 17211981  T
Q  300 ttatatgagggaatttgatgtgataacatatatagtt 336  Q
    || ||||| ||||||||||||||||||||||||||||    
T  17211982 ttgtatgaaggaatttgatgtgataacatatatagtt 17212018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 224 - 355
Target Start/End: Complemental strand, 21411484 - 21411353
Alignment:
Q  224 taagttatgatatcaaattccttcatataagatgagtgtcacagaatgcacctcattctttatgtgatgactcatcttatatgagggaatttgatgtgat 323  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| | ||||||||||||||||||||||||||    
T  21411484 taagttatgatatctaattccttcatataagatgagtgtcacaaaatgcacctcattctttatttgatgacccgtcttatatgagggaatttgatgtgat 21411385  T
Q  324 aacatatatagttgattttgtagaatacatgt 355  Q
     |||||||||||||||| || |||||||||||    
T  21411384 gacatatatagttgattctggagaatacatgt 21411353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 224 - 355
Target Start/End: Original strand, 21411961 - 21412092
Alignment:
Q  224 taagttatgatatcaaattccttcatataagatgagtgtcacagaatgcacctcattctttatgtgatgactcatcttatatgagggaatttgatgtgat 323  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| | ||||||||||||||||||||||||||    
T  21411961 taagttatgatatctaattccttcatataagatgagtgtcacaaaatgcacctcattctttatttgatgacccgtcttatatgagggaatttgatgtgat 21412060  T
Q  324 aacatatatagttgattttgtagaatacatgt 355  Q
     |||||||||||||||| || |||||||||||    
T  21412061 gacatatatagttgattctggagaatacatgt 21412092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 213 - 353
Target Start/End: Original strand, 10315154 - 10315294
Alignment:
Q  213 aatcaactatataagttatgatatcaaattccttcatataagatgagtgtcacagaatgcacctcattctttatgtgatgactcatcttatatgagggaa 312  Q
    ||||| |||||||| |||||||||| |||||||||||||| |||||| ||||||||||||| |||||||| ||||||||||||| ||||||||||  |||    
T  10315154 aatcagctatataaattatgatatcgaattccttcatatatgatgagcgtcacagaatgcaactcattctatatgtgatgactcgtcttatatgaatgaa 10315253  T
Q  313 tttgatgtgataacatatatagttgattttgtagaatacat 353  Q
    |||||||||||||||||| ||||||||| || | |||||||    
T  10315254 tttgatgtgataacatatctagttgattatgcataatacat 10315294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 281 - 372
Target Start/End: Complemental strand, 20758704 - 20758613
Alignment:
Q  281 ctttatgtgatgactcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  20758704 ctttatgtgatgactcatcttatatgagggaattcgatgtgataacttatagagttgattttgtagaatacatgtgttgtgttctcttcatt 20758613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 281 - 372
Target Start/End: Complemental strand, 20765095 - 20765004
Alignment:
Q  281 ctttatgtgatgactcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  20765095 ctttatgtgatgactcatcttatatgagggaattcgatgtgataacttatagagttgattttgtagaatacatgtgttgtgttctcttcatt 20765004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 195 - 265
Target Start/End: Original strand, 13851073 - 13851143
Alignment:
Q  195 acaaaatgtattatgcagaatcaactatataagttatgatatcaaattccttcatataagatgagtgtcac 265  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  13851073 acaacatgtattatgcagaatcaactatataagttatgatatcgaattccttcatataagatgagtgtcac 13851143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 286 - 372
Target Start/End: Original strand, 25145199 - 25145285
Alignment:
Q  286 tgtgatgactcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    |||||||||||||||||||||||| |||| ||||| ||||| |||| ||||||||||||||||||||||| ||||||||||||||||    
T  25145199 tgtgatgactcatcttatatgaggaaattcgatgttataacctataaagttgattttgtagaatacatgtattgtgttctcttcatt 25145285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 22 - 115
Target Start/End: Original strand, 13866488 - 13866587
Alignment:
Q  22 aactacaacaattgtcttacctctgaa------taaggtcaaacctgttaaacaacagctctcaagcattcaccttgaagttttattgttcctttcaaaa 115  Q
    |||||||||||||||| ||||||||||      ||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  13866488 aactacaacaattgtcatacctctgaaattggataaggtcaaacttgttaaacaacagctctcaagcattcacccggaagttttattgttcctttcaaaa 13866587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 281 - 372
Target Start/End: Original strand, 24075761 - 24075852
Alignment:
Q  281 ctttatgtgatgactcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    |||| |||||||||||||| |||| || |||||| ||||||| ||  ||||||||||||||| |||||||||||||||||||| ||||||||    
T  24075761 ctttttgtgatgactcatcgtataagaaggaattcgatgtgagaatttatatagttgattttttagaatacatgtgttgtgttttcttcatt 24075852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 283 - 340
Target Start/End: Complemental strand, 4911076 - 4911019
Alignment:
Q  283 ttatgtgatgactcatcttatatgagggaatttgatgtgataacatatatagttgatt 340  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  4911076 ttatgtgatgactcgtcttatatgagagaatttgatgtgataacatatatagttgatt 4911019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 22 - 115
Target Start/End: Original strand, 13850974 - 13851073
Alignment:
Q  22 aactacaacaattgtcttacctctgaa------taaggtcaaacctgttaaacaacagctctcaagcattcaccttgaagttttattgttcctttcaaaa 115  Q
    ||||||||||||| |||||||||| ||      |||||| |||| |||||||||||| ||||||||||||||||  ||||||||||||||||||||||||    
T  13850974 aactacaacaattatcttacctctaaaattggataaggttaaacttgttaaacaacatctctcaagcattcacccggaagttttattgttcctttcaaaa 13851073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 293 - 372
Target Start/End: Complemental strand, 23124426 - 23124349
Alignment:
Q  293 actcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    |||||||||||||||| ||||| ||||||| ||| ||||||| ||||||||||||||||||||||  |||||||||||||    
T  23124426 actcatcttatatgagagaattcgatgtgaaaacctatatagatgattttgtagaatacatgtgt--tgttctcttcatt 23124349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 281 - 368
Target Start/End: Complemental strand, 23620644 - 23620559
Alignment:
Q  281 ctttatgtgatgactcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctctt 368  Q
    |||||||||| ||||| ||||||||||| ||||| ||||||||||||||||||||||||| || | ||||||  ||||||||||||||    
T  23620644 ctttatgtgacgactcgtcttatatgagagaattcgatgtgataacatatatagttgattctgcataataca--tgttgtgttctctt 23620559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 25 - 115
Target Start/End: Complemental strand, 13855075 - 13854979
Alignment:
Q  25 tacaacaattgtcttacctctgaa------taaggtcaaacctgttaaacaacagctctcaagcattcaccttgaagttttattgttcctttcaaaa 115  Q
    ||||||||||||||||||||||||      |||  |||||| ||||||||||||||| ||||| |||||||  ||||||||||||||||||||||||    
T  13855075 tacaacaattgtcttacctctgaaattggataaattcaaacttgttaaacaacagctttcaagtattcacccggaagttttattgttcctttcaaaa 13854979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 48 - 123
Target Start/End: Original strand, 23620448 - 23620523
Alignment:
Q  48 ataaggtcaaacctgttaaacaacagctctcaagcattcaccttgaagttttattgttcctttcaaaaattaggta 123  Q
    |||||||||||| |||||||||||| ||||||| ||||||||  ||| |||||||| |||||| ||||||||||||    
T  23620448 ataaggtcaaacttgttaaacaacaactctcaaacattcacccggaaattttattgctccttttaaaaattaggta 23620523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 195 - 266
Target Start/End: Original strand, 44100843 - 44100914
Alignment:
Q  195 acaaaatgtattatgcagaatcaactatataagttatgatatcaaattccttcatataagatgagtgtcaca 266  Q
    |||| ||||||||||| |||||||||||||||||| | | ||| ||||||||| ||||||||||||||||||    
T  44100843 acaatatgtattatgccgaatcaactatataagttctcacatcgaattccttcgtataagatgagtgtcaca 44100914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 281 - 372
Target Start/End: Original strand, 44101033 - 44101124
Alignment:
Q  281 ctttatgtgatgactcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    ||||||||||  ||||||| ||||| | || ||| |||| |||||| |||||||||||||  ||| ||||||||||||||||||||||||||    
T  44101033 ctttatgtgactactcatcctatataaagggattcgatgcgataacctatatagttgattcggtataatacatgtgttgtgttctcttcatt 44101124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 286 - 372
Target Start/End: Complemental strand, 12227143 - 12227057
Alignment:
Q  286 tgtgatgactcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    |||||||| ||||| ||||||| |  ||| ||||||| ||| |||||||||||||| ||||||||||  ||||||||||||||||||    
T  12227143 tgtgatgattcatcctatatgaagagattcgatgtgagaacttatatagttgatttggtagaatacaaatgttgtgttctcttcatt 12227057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 45 - 115
Target Start/End: Complemental strand, 13866821 - 13866751
Alignment:
Q  45 tgaataaggtcaaacctgttaaacaacagctctcaagcattcaccttgaagttttattgttcctttcaaaa 115  Q
    |||||||  |||||| ||||||||||| ||||||||| |||||||  ||||||||||||||||||||||||    
T  13866821 tgaataaattcaaacttgttaaacaacggctctcaagtattcacccggaagttttattgttcctttcaaaa 13866751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 125 - 185
Target Start/End: Original strand, 25144756 - 25144816
Alignment:
Q  125 tgtctttattttgttggagtttaaattaaattcttgttagtttactaaagatgttggtatt 185  Q
    |||||||||||||||||| ||||| || ||||||||||||||| || ||||||||||||||    
T  25144756 tgtctttattttgttggaatttaagtttaattcttgttagtttgctgaagatgttggtatt 25144816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 187 - 260
Target Start/End: Original strand, 23620559 - 23620632
Alignment:
Q  187 aagacaacacaaaatgtattatgcagaatcaactatataagttatgatatcaaattccttcatataagatgagt 260  Q
    |||| ||||||| |||||||||||||||||||||||||| ||||| | ||| |||||  |||||||||| ||||    
T  23620559 aagagaacacaacatgtattatgcagaatcaactatatatgttatcacatcgaattctctcatataagacgagt 23620632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 54 - 115
Target Start/End: Original strand, 31324436 - 31324497
Alignment:
Q  54 tcaaacctgttaaacaacagctctcaagcattcaccttgaagttttattgttcctttcaaaa 115  Q
    |||||| || ||||| ||||||||||||||||||||  |||||| |||||||||||||||||    
T  31324436 tcaaacttgctaaacgacagctctcaagcattcacccggaagttctattgttcctttcaaaa 31324497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 195 - 260
Target Start/End: Complemental strand, 31324660 - 31324595
Alignment:
Q  195 acaaaatgtattatgcagaatcaactatataagttatgatatcaaattccttcatataagatgagt 260  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| |||||  || ||||||||||||    
T  31324660 acaacatgtattatgcagaatcaactatatatgttatcatatcgaattctctcgtataagatgagt 31324595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 290 - 355
Target Start/End: Complemental strand, 49816866 - 49816801
Alignment:
Q  290 atgactcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgt 355  Q
    ||||||| || ||||||| |||||||||||||||||||||| ||||||||| || | |||||||||    
T  49816866 atgactcgtcatatatgaaggaatttgatgtgataacatatgtagttgattatgcataatacatgt 49816801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 195 - 255
Target Start/End: Complemental strand, 9718069 - 9718009
Alignment:
Q  195 acaaaatgtattatgcagaatcaactatataagttatgatatcaaattccttcatataaga 255  Q
    |||| |||||||||||||||||||||||||| ||||| | |||||||||  ||||||||||    
T  9718069 acaacatgtattatgcagaatcaactatatatgttatcacatcaaattctctcatataaga 9718009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 200 - 260
Target Start/End: Complemental strand, 18413286 - 18413226
Alignment:
Q  200 atgtattatgcagaatcaactatataagttatgatatcaaattccttcatataagatgagt 260  Q
    |||||||||||| ||||||||||||| ||||| | |||||||||| |||||||||| ||||    
T  18413286 atgtattatgcaaaatcaactatatatgttatcacatcaaattccctcatataagacgagt 18413226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 397 - 437
Target Start/End: Complemental strand, 20758540 - 20758500
Alignment:
Q  397 aaactttcaagaatttaatttaaatccagcatcatgatgat 437  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  20758540 aaactttcaagaatttaatttaaatccaacatcatgatgat 20758500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 125 - 185
Target Start/End: Complemental strand, 20759115 - 20759055
Alignment:
Q  125 tgtctttattttgttggagtttaaattaaattcttgttagtttactaaagatgttggtatt 185  Q
    |||||||||||||||||| ||||| || ||||||||||||||| || || |||||||||||    
T  20759115 tgtctttattttgttggaatttaagtttaattcttgttagtttgctgaaaatgttggtatt 20759055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 397 - 437
Target Start/End: Complemental strand, 20764931 - 20764891
Alignment:
Q  397 aaactttcaagaatttaatttaaatccagcatcatgatgat 437  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  20764931 aaactttcaagaatttaatttaaatccaacatcatgatgat 20764891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 125 - 185
Target Start/End: Complemental strand, 20765506 - 20765446
Alignment:
Q  125 tgtctttattttgttggagtttaaattaaattcttgttagtttactaaagatgttggtatt 185  Q
    |||||||||||||||||| ||||| || ||||||||||||||| || || |||||||||||    
T  20765506 tgtctttattttgttggaatttaagtttaattcttgttagtttgctgaaaatgttggtatt 20765446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 129 - 185
Target Start/End: Original strand, 24075320 - 24075376
Alignment:
Q  129 tttattttgttggagtttaaattaaattcttgttagtttactaaagatgttggtatt 185  Q
    ||||||||||| || |||||||| ||||||||||||||| || ||||||||||||||    
T  24075320 tttattttgtttgaatttaaatttaattcttgttagtttgctgaagatgttggtatt 24075376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 397 - 437
Target Start/End: Original strand, 44101198 - 44101238
Alignment:
Q  397 aaactttcaagaatttaatttaaatccagcatcatgatgat 437  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  44101198 aaactttcaagaatttaatttaaatccaacatcatgatgat 44101238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 269
Target Start/End: Original strand, 25144874 - 25144956
Alignment:
Q  187 aagacaacacaaaatgtattatgcagaatcaactatataagttatgatatcaaattccttcatataagatgagtgtcacagaa 269  Q
    |||| ||||||| ||||||| ||||||||||  |||||||||||| ||||  |||||| |  |||| ||||||||||||||||    
T  25144874 aagagaacacaacatgtattctgcagaatcagttatataagttatcatatggaattccattgtataggatgagtgtcacagaa 25144956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 293 - 355
Target Start/End: Complemental strand, 31324562 - 31324500
Alignment:
Q  293 actcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgt 355  Q
    ||||||||||||||| | |||||||| | ||||| |||||||||||||||| | |||||||||    
T  31324562 actcatcttatatgaagaaatttgatatcataacttatatagttgattttgaataatacatgt 31324500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 199 - 260
Target Start/End: Complemental strand, 10315295 - 10315234
Alignment:
Q  199 aatgtattatgcagaatcaactatataagttatgatatcaaattccttcatataagatgagt 260  Q
    ||||||||||||| ||||||||| ||| ||||| | ||||||||| ||||||||||| ||||    
T  10315295 aatgtattatgcataatcaactagatatgttatcacatcaaattcattcatataagacgagt 10315234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 201 - 266
Target Start/End: Complemental strand, 12227332 - 12227267
Alignment:
Q  201 tgtattatgcagaatcaactatataagttatgatatcaaattccttcatataagatgagtgtcaca 266  Q
    |||||| ||| |||||||||||||| ||| | | ||| ||||||||| ||||||||||||||||||    
T  12227332 tgtattctgccgaatcaactatatatgttttcacatcgaattccttcgtataagatgagtgtcaca 12227267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 195 - 260
Target Start/End: Complemental strand, 13866751 - 13866686
Alignment:
Q  195 acaaaatgtattatgcagaatcaactatataagttatgatatcaaattccttcatataagatgagt 260  Q
    |||| |||||||||||||||||||||||||| ||||| | ||| |||| | |||||||||| ||||    
T  13866751 acaacatgtattatgcagaatcaactatatatgttatcacatcgaatttcctcatataagacgagt 13866686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 200 - 260
Target Start/End: Original strand, 4911006 - 4911066
Alignment:
Q  200 atgtattatgcagaatcaactatataagttatgatatcaaattccttcatataagatgagt 260  Q
    |||||||||| ||||||||||||||| ||||| | |||||||||  |||||||||| ||||    
T  4911006 atgtattatgaagaatcaactatatatgttatcacatcaaattctctcatataagacgagt 4911066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 115
Target Start/End: Complemental strand, 18413130 - 18413031
Alignment:
Q  22 aactacaacaattgtcttacctctgaa------taaggtcaaacctgttaaacaacagctctcaagcattcaccttgaagttttattgttcctttcaaaa 115  Q
    ||||||||||||| |||||||||||||      |||  |||||| || ||||||||| |||||||  |||||||  |||||||||||||||| |||||||    
T  18413130 aactacaacaattatcttacctctgaaattaggtaaattcaaacttgctaaacaacaactctcaaatattcacccggaagttttattgttccattcaaaa 18413031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 397 - 437
Target Start/End: Original strand, 24075925 - 24075965
Alignment:
Q  397 aaactttcaagaatttaatttaaatccagcatcatgatgat 437  Q
    ||||||||||||||| |||||||||||| ||||||||||||    
T  24075925 aaactttcaagaattaaatttaaatccaacatcatgatgat 24075965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 200 - 252
Target Start/End: Original strand, 49816803 - 49816855
Alignment:
Q  200 atgtattatgcagaatcaactatataagttatgatatcaaattccttcatata 252  Q
    |||||||||||| ||||||||| ||| ||||| | ||||||||||||||||||    
T  49816803 atgtattatgcataatcaactacatatgttatcacatcaaattccttcatata 49816855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 293 - 340
Target Start/End: Original strand, 12227273 - 12227320
Alignment:
Q  293 actcatcttatatgagggaatttgatgtgataacatatatagttgatt 340  Q
    |||||||||||| || |||||| ||||||| |||||||||||||||||    
T  12227273 actcatcttatacgaaggaattcgatgtgaaaacatatatagttgatt 12227320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 293 - 355
Target Start/End: Complemental strand, 13851138 - 13851076
Alignment:
Q  293 actcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgt 355  Q
    ||||||||||||||| |||||| ||| | ||||| ||||||||||||| || | |||||||||    
T  13851138 actcatcttatatgaaggaattcgatatcataacttatatagttgattctgcataatacatgt 13851076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 309 - 339
Target Start/End: Original strand, 24607690 - 24607720
Alignment:
Q  309 ggaatttgatgtgataacatatatagttgat 339  Q
    |||||||||||||||||||||||||||||||    
T  24607690 ggaatttgatgtgataacatatatagttgat 24607720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 54 - 112
Target Start/End: Complemental strand, 31324721 - 31324663
Alignment:
Q  54 tcaaacctgttaaacaacagctctcaagcattcaccttgaagttttattgttcctttca 112  Q
    |||||| || |||| |||||||||||||||||||||   |||||| |||||||||||||    
T  31324721 tcaaacttgctaaataacagctctcaagcattcacccgaaagtttaattgttcctttca 31324663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 23124253 - 23124294
Alignment:
Q  144 tttaaattaaattcttgttagtttactaaagatgttggtatt 185  Q
    ||||||||||||||||||||| || || ||||||||||||||    
T  23124253 tttaaattaaattcttgttagattgctgaagatgttggtatt 23124294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 200 - 260
Target Start/End: Original strand, 20758632 - 20758692
Alignment:
Q  200 atgtattatgcagaatcaactatataagttatgatatcaaattccttcatataagatgagt 260  Q
    ||||||| | || |||||||| |||||||||| | ||| |||||| |||||||||||||||    
T  20758632 atgtattctacaaaatcaactctataagttatcacatcgaattccctcatataagatgagt 20758692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 200 - 260
Target Start/End: Original strand, 20765023 - 20765083
Alignment:
Q  200 atgtattatgcagaatcaactatataagttatgatatcaaattccttcatataagatgagt 260  Q
    ||||||| | || |||||||| |||||||||| | ||| |||||| |||||||||||||||    
T  20765023 atgtattctacaaaatcaactctataagttatcacatcgaattccctcatataagatgagt 20765083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 255
Target Start/End: Original strand, 21411350 - 21411410
Alignment:
Q  195 acaaaatgtattatgcagaatcaactatataagttatgatatcaaattccttcatataaga 255  Q
    |||| ||||||| | |||||||||||||||| || || | |||||||||| ||||||||||    
T  21411350 acaacatgtattctccagaatcaactatatatgtcatcacatcaaattccctcatataaga 21411410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 255
Target Start/End: Complemental strand, 21412095 - 21412035
Alignment:
Q  195 acaaaatgtattatgcagaatcaactatataagttatgatatcaaattccttcatataaga 255  Q
    |||| ||||||| | |||||||||||||||| || || | |||||||||| ||||||||||    
T  21412095 acaacatgtattctccagaatcaactatatatgtcatcacatcaaattccctcatataaga 21412035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 293 - 368
Target Start/End: Complemental strand, 24075507 - 24075434
Alignment:
Q  293 actcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctctt 368  Q
    ||||||| |||| || ||||||| |||||| ||  ||||||| ||||| |||||||||||  ||||||||||||||    
T  24075507 actcatcatataagaaggaattttatgtgaaaatctatatagctgattctgtagaataca--tgttgtgttctctt 24075434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 200 - 260
Target Start/End: Original strand, 24576606 - 24576666
Alignment:
Q  200 atgtattatgcagaatcaactatataagttatgatatcaaattccttcatataagatgagt 260  Q
    ||||||| | || ||||||||||||| ||||| | |||||||||| |||||||||| ||||    
T  24576606 atgtattctacaaaatcaactatatatgttatcacatcaaattccctcatataagacgagt 24576666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 437
Target Start/End: Original strand, 25145358 - 25145398
Alignment:
Q  397 aaactttcaagaatttaatttaaatccagcatcatgatgat 437  Q
    |||||||||||| || |||||||||||| ||||||||||||    
T  25145358 aaactttcaagagttaaatttaaatccaacatcatgatgat 25145398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 293 - 380
Target Start/End: Complemental strand, 44100908 - 44100823
Alignment:
Q  293 actcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatttttgtaag 380  Q
    |||||||||||| || |||||| ||||||| ||| |||||||||||||  | | ||||||  | |||| ||||||||||| |||||||    
T  44100908 actcatcttatacgaaggaattcgatgtgagaacttatatagttgattcggcataataca--tattgttttctcttcattcttgtaag 44100823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 219; Significance: 1e-120; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 22 - 384
Target Start/End: Complemental strand, 31991913 - 31991548
Alignment:
Q  22 aactacaacaattgtcttacctctgaa------taaggtcaaacctgttaaacaacagctctcaagcattcaccttgaagttttattgttcctttcaaaa 115  Q
    |||||||||||||||||||||||||||      ||||||||||||| || ||||||||||||||||||||||||   |||||||||||||||||||||||    
T  31991913 aactacaacaattgtcttacctctgaaattggataaggtcaaacctattgaacaacagctctcaagcattcacccgaaagttttattgttcctttcaaaa 31991814  T
Q  116 attaggtaatgtctttattttgttggagtttaaattaaattcttgttagtttactaaagatgttggtattaaagacaacacaaaatgtattatgcagaat 215  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||| ||||   ||| ||      |||||  | ||||||| ||||||||||||||||    
T  31991813 attaggtagtgtctttattttgttggaatttaaattaaattcttgttggtttg--aaaaatcaaaagattaat-agaacacaacatgtattatgcagaat 31991717  T
Q  216 caactatataagttatgatatcaaattccttcatataagatgagtgtcacagaatgcacctcattctttatgtgatgactcatcttatatgagggaattt 315  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||||||     
T  31991716 caactatataagttatgatatcgaattccttcatataagatgagtgtcatggaatgcacctcattctttatgtgatgactcgtcttatatgagggaattc 31991617  T
Q  316 gatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatttttgtaagacac 384  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||||    
T  31991616 gatgtgataacatatatagttgattttgtagaatacatgtgttgtgttatcttcattcttataagacac 31991548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 195 - 339
Target Start/End: Original strand, 20148751 - 20148895
Alignment:
Q  195 acaaaatgtattatgcagaatcaactatataagttatgatatcaaattccttcatataagatgagtgtcacagaatgcacctcattctttatgtgatgac 294  Q
    |||| |||||||||||||||||| |||||||| |||||||||  ||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||    
T  20148751 acaacatgtattatgcagaatcagctatataaattatgatattgaattccttcatataagatgagtgccacggaatgcacctcagtctttatgtgatgac 20148850  T
Q  295 tcatcttatatgagggaatttgatgtgataacatatatagttgat 339  Q
    ||||||||||| | |||||||||||||||||||||||||||||||    
T  20148851 tcatcttatataaaggaatttgatgtgataacatatatagttgat 20148895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 200 - 339
Target Start/End: Original strand, 16708018 - 16708157
Alignment:
Q  200 atgtattatgcagaatcaactatataagttatgatatcaaattccttcatataagatgagtgtcacagaatgcacctcattctttatgtgatgactcatc 299  Q
    |||||||||  ||||||| ||||||||||||| ||||| |||||||||||||||||||| |||||| |||||||||||  ||||||||||||||||| ||    
T  16708018 atgtattattgagaatcagctatataagttataatatcgaattccttcatataagatgattgtcacggaatgcacctcggtctttatgtgatgactcgtc 16708117  T
Q  300 ttatatgagggaatttgatgtgataacatatatagttgat 339  Q
    ||||||||  ||||||||||||||||||||||| ||||||    
T  16708118 ttatatgaatgaatttgatgtgataacatatatcgttgat 16708157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 200 - 339
Target Start/End: Original strand, 16708468 - 16708607
Alignment:
Q  200 atgtattatgcagaatcaactatataagttatgatatcaaattccttcatataagatgagtgtcacagaatgcacctcattctttatgtgatgactcatc 299  Q
    |||||||||  ||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||  |||||||| ||  ||||||||||||||||| ||    
T  16708468 atgtattattgagaatcagctatataagttatgatatcgaattccttcatgtaagatgagtgtcatggaatgcacatcggtctttatgtgatgactcgtc 16708567  T
Q  300 ttatatgagggaatttgatgtgataacatatatagttgat 339  Q
    ||||||||  |||||||||| |||||||||||||||||||    
T  16708568 ttatatgaatgaatttgatgagataacatatatagttgat 16708607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 223 - 340
Target Start/End: Complemental strand, 15891506 - 15891389
Alignment:
Q  223 ataagttatgatatcaaattccttcatataagatgagtgtcacagaatgcacctcattctttatgtgatgactcatcttatatgagggaatttgatgtga 322  Q
    ||||||||||||||  ||||||||||||||||||||||||||| ||||| |||||||||| |||||||||| || ||||||| |||||||||||||||||    
T  15891506 ataagttatgatattgaattccttcatataagatgagtgtcacggaatggacctcattctatatgtgatgattcctcttatacgagggaatttgatgtga 15891407  T
Q  323 taacatatatagttgatt 340  Q
    |||||||||||| |||||    
T  15891406 taacatatatagatgatt 15891389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 279 - 372
Target Start/End: Original strand, 18879170 - 18879263
Alignment:
Q  279 ttctttatgtgatgactcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    |||||| |||||||||||||| ||||||||| |||| ||||||| ||  ||||||||||||||||||||||||||||| |||||||||||||||    
T  18879170 ttctttctgtgatgactcatcgtatatgaggtaattcgatgtgagaatttatatagttgattttgtagaatacatgtgctgtgttctcttcatt 18879263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 206 - 277
Target Start/End: Complemental strand, 27650239 - 27650168
Alignment:
Q  206 tatgcagaatcaactatataagttatgatatcaaattccttcatataagatgagtgtcacagaatgcacctc 277  Q
    |||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||    
T  27650239 tatgcagaatcagctatataagttatgatattgaattccttcatataagatgagtgtcacggaatgcacctc 27650168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 281 - 372
Target Start/End: Complemental strand, 28276433 - 28276342
Alignment:
Q  281 ctttatgtgatgactcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    ||||||||||| ||||||||||||||||||||||  |||||| ||| || | |||| |||  ||||||||||||||||||||||||||||||    
T  28276433 ctttatgtgataactcatcttatatgagggaattcaatgtgaaaacctaaagagttaattcggtagaatacatgtgttgtgttctcttcatt 28276342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 293 - 372
Target Start/End: Complemental strand, 12763930 - 12763853
Alignment:
Q  293 actcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    ||||||||||||  |||||||| ||||||| |||||||||||||||||||||| ||||||  ||||||||||||||||||    
T  12763930 actcatcttatacaagggaattcgatgtgaaaacatatatagttgattttgtaaaataca--tgttgtgttctcttcatt 12763853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 25 - 115
Target Start/End: Original strand, 15891275 - 15891371
Alignment:
Q  25 tacaacaattgtcttacctctgaa------taaggtcaaacctgttaaacaacagctctcaagcattcaccttgaagttttattgttcctttcaaaa 115  Q
    ||||||||||||||||||||||||      |||  | ||||||| ||||||||||||||||||||||||||  ||||||||||||||||| ||||||    
T  15891275 tacaacaattgtcttacctctgaaattgaataaatttaaacctgctaaacaacagctctcaagcattcacccggaagttttattgttcctatcaaaa 15891371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 279 - 372
Target Start/End: Original strand, 26226569 - 26226662
Alignment:
Q  279 ttctttatgtgatgactcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    |||||| |||||| ||||||| ||||| ||||||||  |||||| ||  | ||||||  |||||||||||||||||||||||||||||||||||    
T  26226569 ttctttgtgtgattactcatcgtatataagggaattcaatgtgagaatttgtatagtaaattttgtagaatacatgtgttgtgttctcttcatt 26226662  T

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Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 15891586 - 15891525
Alignment:
Q  54 tcaaacctgttaaacaacagctctcaagcattcaccttgaagttttattgttcctttcaaaa 115  Q
    |||||| || |||| ||||| |||||||||||||||| ||||||||||||||||||||||||    
T  15891586 tcaaacttgctaaataacagttctcaagcattcacctggaagttttattgttcctttcaaaa 15891525  T

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Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 27650404 - 27650304
Alignment:
Q  22 aactacaacaattgtcttacctctgaa------taaggtcaaacctgttaaacaacagctctcaagcattcaccttgaagttttattgttcctttcaaaa 115  Q
    |||||||||||||| ||||||||||||      |||||||||||||||| |||||||  |||||||||||||||   ||||| |||||||||||| ||||    
T  27650404 aactacaacaattgacttacctctgaagttggataaggtcaaacctgttgaacaacaaatctcaagcattcacccgaaagttatattgttccttttaaaa 27650305  T
Q  116 a 116  Q
    |    
T  27650304 a 27650304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 293 - 372
Target Start/End: Original strand, 20988973 - 20989050
Alignment:
Q  293 actcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    ||||||| ||||||| || ||||||||||||||| |||| ||||||||  |||||||||||||||  |||||||||||||    
T  20988973 actcatcctatatgaagggatttgatgtgataacctataaagttgattcggtagaatacatgtgt--tgttctcttcatt 20989050  T

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Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 293 - 372
Target Start/End: Original strand, 12764096 - 12764175
Alignment:
Q  293 actcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    |||||||||||||||||  |||  |||||| || ||||||||||||||| |||||||||  ||||| |||||||||||||    
T  12764096 actcatcttatatgaggtcattcaatgtgaaaatatatatagttgatttagtagaatactagtgttctgttctcttcatt 12764175  T

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Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 298 - 372
Target Start/End: Complemental strand, 5305303 - 5305230
Alignment:
Q  298 tcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    ||||||||||||||||| ||||||||||| ||||||| |||||  ||| |||||| |||||||||| ||||||||    
T  5305303 tcttatatgagggaattcgatgtgataacctatatag-tgattcagtataatacaagtgttgtgttttcttcatt 5305230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 124 - 185
Target Start/End: Complemental strand, 28276880 - 28276819
Alignment:
Q  124 atgtctttattttgttggagtttaaattaaattcttgttagtttactaaagatgttggtatt 185  Q
    |||| |||||||||||||| ||||| || ||||||||||||||| || ||||||||||||||    
T  28276880 atgtatttattttgttggaatttaagtttaattcttgttagtttgctgaagatgttggtatt 28276819  T

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Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 319 - 372
Target Start/End: Complemental strand, 28746171 - 28746118
Alignment:
Q  319 gtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    |||| ||| ||||||||||||||  |||||||||||||||||||||||||||||    
T  28746171 gtgagaacttatatagttgatttgatagaatacatgtgttgtgttctcttcatt 28746118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 328 - 372
Target Start/End: Complemental strand, 26617182 - 26617138
Alignment:
Q  328 tatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    ||||||||||||||  |||||||||||||||||||||||||||||    
T  26617182 tatatagttgatttgctagaatacatgtgttgtgttctcttcatt 26617138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 309 - 372
Target Start/End: Original strand, 26617272 - 26617333
Alignment:
Q  309 ggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    |||||| ||||||| |||||||||||||||||| ||| ||||||  ||||||||||||||||||    
T  26617272 ggaattcgatgtgaaaacatatatagttgatttggtaaaataca--tgttgtgttctcttcatt 26617333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 293 - 352
Target Start/End: Complemental strand, 20529408 - 20529349
Alignment:
Q  293 actcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaataca 352  Q
    ||||||||||||||| |||||| ||||||| ||| |||||||||||||  ||||||||||    
T  20529408 actcatcttatatgaaggaattcgatgtgagaacctatatagttgattcggtagaataca 20529349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 167
Target Start/End: Original strand, 20988735 - 20988786
Alignment:
Q  116 attaggtaatgtctttattttgttggagtttaaattaaattcttgttagttt 167  Q
    |||| |||||||||||||||||||||| ||||| || |||||||||||||||    
T  20988735 attatgtaatgtctttattttgttggaatttaagtttaattcttgttagttt 20988786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 265
Target Start/End: Original strand, 18878853 - 18878931
Alignment:
Q  187 aagacaacacaaaatgtattatgcagaatcaactatataagttatgatatcaaattccttcatataagatgagtgtcac 265  Q
    |||| ||||||| ||||||| |||||||||  ||||||| ||| | | ||| |||||||||||||| ||||||||||||    
T  18878853 aagagaacacaacatgtattctgcagaatctgctatataggttttcacatcgaattccttcatatatgatgagtgtcac 18878931  T

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Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 16253958 - 16253897
Alignment:
Q  54 tcaaacctgttaaacaacagctctcaagcattcaccttgaagttttattgttcctttcaaaa 115  Q
    ||||||||| |||||  ||||||||||||||||||   |||||||||||||||| |||||||    
T  16253958 tcaaacctgctaaacggcagctctcaagcattcactcggaagttttattgttccattcaaaa 16253897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 125 - 185
Target Start/End: Complemental strand, 28746939 - 28746878
Alignment:
Q  125 tgtctttattttgttggagtttaaatta-aattcttgttagtttactaaagatgttggtatt 185  Q
    |||||||||||||||||| ||||| ||  ||||||||||||||| || ||||||||||||||    
T  28746939 tgtctttattttgttggattttaagttttaattcttgttagtttgctgaagatgttggtatt 28746878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 11718990 - 11719042
Alignment:
Q  129 tttattttgttggagtttaaattaaattcttgttagtttactaaagatgttgg 181  Q
    |||||||||||||| ||||| || ||||||||||||||| || ||||||||||    
T  11718990 tttattttgttggaatttaagtttaattcttgttagtttgctgaagatgttgg 11719042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 388 - 436
Target Start/End: Complemental strand, 20529267 - 20529219
Alignment:
Q  388 attttcagtaaactttcaagaatttaatttaaatccagcatcatgatga 436  Q
    |||||||  ||||||||| |||||||||||||||||| |||||||||||    
T  20529267 attttcaacaaactttcatgaatttaatttaaatccaacatcatgatga 20529219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 185
Target Start/End: Original strand, 18878741 - 18878795
Alignment:
Q  131 tattttgttggagtttaaattaaattcttgttagtttactaaagatgttggtatt 185  Q
    |||||||||| | ||||| || ||||||||||||||| || ||||||||||||||    
T  18878741 tattttgttgaaatttaagtttaattcttgttagtttgctgaagatgttggtatt 18878795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 214 - 260
Target Start/End: Complemental strand, 20148895 - 20148849
Alignment:
Q  214 atcaactatataagttatgatatcaaattccttcatataagatgagt 260  Q
    |||||||||||| ||||| | |||||||||||| |||||||||||||    
T  20148895 atcaactatatatgttatcacatcaaattcctttatataagatgagt 20148849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 293 - 355
Target Start/End: Original strand, 31991672 - 31991734
Alignment:
Q  293 actcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgt 355  Q
    ||||||||||||||| |||||| ||| | ||||| ||||||||||||| || | |||||||||    
T  31991672 actcatcttatatgaaggaattcgatatcataacttatatagttgattctgcataatacatgt 31991734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 437
Target Start/End: Original strand, 26226722 - 26226775
Alignment:
Q  384 caatattttcagtaaactttcaagaatttaatttaaatccagcatcatgatgat 437  Q
    |||||||||| | ||||||||||   ||||||||||||||| ||||||||||||    
T  26226722 caatattttccgcaaactttcaactgtttaatttaaatccaacatcatgatgat 26226775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 437
Target Start/End: Complemental strand, 28276282 - 28276229
Alignment:
Q  384 caatattttcagtaaactttcaagaatttaatttaaatccagcatcatgatgat 437  Q
    ||||||||||| ||||||||||| |||| || ||||||||| | ||||||||||    
T  28276282 caatattttcactaaactttcaaaaattaaacttaaatccaacgtcatgatgat 28276229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 372
Target Start/End: Complemental strand, 11719142 - 11719101
Alignment:
Q  329 atatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    ||||||||||||||| ||||||||  ||||||||||||||||||    
T  11719142 atatagttgattttgcagaataca--tgttgtgttctcttcatt 11719101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 125 - 185
Target Start/End: Original strand, 18332787 - 18332847
Alignment:
Q  125 tgtctttattttgttggagtttaaattaaattcttgttagtttactaaagatgttggtatt 185  Q
    |||||||||||||||||| ||||| || ||||||| ||||||| |  ||||||||| ||||    
T  18332787 tgtctttattttgttggaatttaagtttaattcttattagtttgcggaagatgttgatatt 18332847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 293 - 368
Target Start/End: Complemental strand, 18878926 - 18878853
Alignment:
Q  293 actcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctctt 368  Q
    ||||||| ||||||| |||||| ||||||| ||| |||||||  |||| || ||||||||  ||||||||||||||    
T  18878926 actcatcatatatgaaggaattcgatgtgaaaacctatatagcagattctgcagaataca--tgttgtgttctctt 18878853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 20529360 - 20529408
Alignment:
Q  212 gaatcaactatataagttatgatatcaaattccttcatataagatgagt 260  Q
    |||||||||||||| ||| | | ||| ||||||||||||||||||||||    
T  20529360 gaatcaactatataggttctcacatcgaattccttcatataagatgagt 20529408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 372
Target Start/End: Original strand, 28746780 - 28746825
Alignment:
Q  325 acatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    |||||||||||||||||  |||||||||  ||||||||||||||||||    
T  28746780 acatatatagttgatttgctagaataca--tgttgtgttctcttcatt 28746825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 154; Significance: 2e-81; HSPs: 53)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 187 - 438
Target Start/End: Complemental strand, 17465102 - 17464844
Alignment:
Q  187 aagacaacacaaaatgtattatgcagaatcaactatataagttatgatatcaaattccttcatataagatgagtgtcacagaatgcacctcattctttat 286  Q
    |||| |||| || |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  17465102 aagagaacataacatgtattatgcagaatcacctatataagttatgatatcgaattccttcatataagatgagtgtcacggaatgcacctcattcattat 17465003  T
Q  287 gtgatgactcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatttttgtaagacac-- 384  Q
    |||||||||||| ||||||||||||||| ||  ||||||||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||      
T  17465002 gtgatgactcatattatatgagggaattcga--tgataacatatatagttgattttgttgaatacatgtgttgtgttctcttcattcttataagacactc 17464905  T
Q  385 -------aatattttcagtaaactttcaagaatttaatttaaatccagcatcatgatgatg 438  Q
           ||||||||||||||||||||| ||||||||||||||| || || ||||||||||    
T  17464904 tagtgaaaatattttcagtaaactttcatgaatttaatttaaatacaacaacatgatgatg 17464844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 195 - 355
Target Start/End: Complemental strand, 14482704 - 14482544
Alignment:
Q  195 acaaaatgtattatgcagaatcaactatataagttatgatatcaaattccttcatataagatgagtgtcacagaatgcacctcattctttatgtgatgac 294  Q
    |||| |||||||||||  ||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  14482704 acaacatgtattatgccaaatcagctatataagttatgatatcgaattccttcatataagatgagtgtcatagaatgcacctcattctttatgtgatgac 14482605  T
Q  295 tcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgt 355  Q
    || |||||||||| | |||| ||||||| ||||||||||||||||| || | |||||||||    
T  14482604 tcgtcttatatgaagaaattcgatgtgaaaacatatatagttgattctgcataatacatgt 14482544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 195 - 339
Target Start/End: Original strand, 23911371 - 23911515
Alignment:
Q  195 acaaaatgtattatgcagaatcaactatataagttatgatatcaaattccttcatataagatgagtgtcacagaatgcacctcattctttatgtgatgac 294  Q
    |||| |||||||||||| ||||| |||||||| |||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  23911371 acaacatgtattatgcataatcatctatataaattatgatatcgaattccttcatataagatgagtgtcacgaaatgcacctcattctttatgtgatgac 23911470  T
Q  295 tcatcttatatgagggaatttgatgtgataacatatatagttgat 339  Q
    || ||||||| || |||||||||||||||||||||||||||||||    
T  23911471 tcgtcttatacgaaggaatttgatgtgataacatatatagttgat 23911515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 195 - 355
Target Start/End: Complemental strand, 20242008 - 20241848
Alignment:
Q  195 acaaaatgtattatgcagaatcaactatataagttatgatatcaaattccttcatataagatgagtgtcacagaatgcacctcattctttatgtgatgac 294  Q
    |||| |||||| ||||||||||| ||||||| ||| ||||||  |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  20242008 acaacatgtatcatgcagaatcagctatatatgttttgatatagaatttcttcatataagatgagtgtcacggaatgcacctcattctttatgtgatgac 20241909  T
Q  295 tcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgt 355  Q
    || ||||||||||||||||| ||||||||||||||||||| ||||| || | |||||||||    
T  20241908 tcgtcttatatgagggaattcgatgtgataacatatatagatgattgtgcataatacatgt 20241848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 195 - 355
Target Start/End: Complemental strand, 22135992 - 22135832
Alignment:
Q  195 acaaaatgtattatgcagaatcaactatataagttatgatatcaaattccttcatataagatgagtgtcacagaatgcacctcattctttatgtgatgac 294  Q
    |||| |||||| ||||||||||| ||||||| ||| ||||||  |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  22135992 acaacatgtatcatgcagaatcagctatatatgttttgatatagaatttcttcatataagatgagtgtcacggaatgcacctcattctttatgtgatgac 22135893  T
Q  295 tcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgt 355  Q
    || ||||||||||||||||| ||||||||||||||||||| ||||| || | |||||||||    
T  22135892 tcgtcttatatgagggaattcgatgtgataacatatatagatgattgtgcataatacatgt 22135832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 195 - 355
Target Start/End: Complemental strand, 22143345 - 22143185
Alignment:
Q  195 acaaaatgtattatgcagaatcaactatataagttatgatatcaaattccttcatataagatgagtgtcacagaatgcacctcattctttatgtgatgac 294  Q
    |||| |||||| ||||||||||| ||||||| ||| ||||||  |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  22143345 acaacatgtatcatgcagaatcagctatatatgttttgatatagaatttcttcatataagatgagtgtcacggaatgcacctcattctttatgtgatgac 22143246  T
Q  295 tcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgt 355  Q
    || ||||||||||||||||| ||||||||||||||||||| ||||| || | |||||||||    
T  22143245 tcgtcttatatgagggaattcgatgtgataacatatatagatgattgtgcataatacatgt 22143185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 22 - 123
Target Start/End: Original strand, 28051597 - 28051698
Alignment:
Q  22 aactacaacaattgtcttacctctgaataaggtcaaacctgttaaacaacagctctcaagcattcaccttgaagttttattgttcctttcaaaaattagg 121  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||   |||||||||||||||||||||||||||||    
T  28051597 aactacaaccattttcttacctctgaataaggtcaaacctgttaaacaacagctctcaaacattcacccaaaagttttattgttcctttcaaaaattagg 28051696  T
Q  122 ta 123  Q
    ||    
T  28051697 ta 28051698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 281 - 372
Target Start/End: Original strand, 19243338 - 19243429
Alignment:
Q  281 ctttatgtgatgactcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    |||| ||| |||||||||||||||||||| |||||||||||||||| |||| |||| |||| ||||||||||||||||||||||||||||||    
T  19243338 ctttttgtcatgactcatcttatatgaggcaatttgatgtgataacctataaagttaatttggtagaatacatgtgttgtgttctcttcatt 19243429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 117 - 185
Target Start/End: Complemental strand, 30765070 - 30765002
Alignment:
Q  117 ttaggtaatgtctttattttgttggagtttaaattaaattcttgttagtttactaaagatgttggtatt 185  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||    
T  30765070 ttaggtaatgtctttattttgttggaatttaaattaaattcttgttagtttgctgaagatgttggtatt 30765002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 281 - 372
Target Start/End: Complemental strand, 30764622 - 30764533
Alignment:
Q  281 ctttatgtgatgactcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    |||| |||||||||||| | ||||||||||||||  |||||| ||  ||||||||||||||||||||||||||||||  |||||||||||||    
T  30764622 ctttttgtgatgactcaccgtatatgagggaattctatgtgagaatttatatagttgattttgtagaatacatgtgt--tgttctcttcatt 30764533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 281 - 372
Target Start/End: Complemental strand, 21864431 - 21864340
Alignment:
Q  281 ctttatgtgatgactcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    ||||||||||||||||||||||||||||| |||| ||||||| ||  ||||||||||||||  || ||||||| | |||||| |||||||||    
T  21864431 ctttatgtgatgactcatcttatatgaggtaattcgatgtgagaatttatatagttgatttgatataatacatttattgtgtcctcttcatt 21864340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 117 - 185
Target Start/End: Complemental strand, 17465228 - 17465160
Alignment:
Q  117 ttaggtaatgtctttattttgttggagtttaaattaaattcttgttagtttactaaagatgttggtatt 185  Q
    ||||||| |||||||||||||||||| |||||||| ||||||| ||||||| || ||||||||||||||    
T  17465228 ttaggtagtgtctttattttgttggaatttaaattcaattcttattagtttgctgaagatgttggtatt 17465160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 54 - 115
Target Start/End: Original strand, 20192585 - 20192646
Alignment:
Q  54 tcaaacctgttaaacaacagctctcaagcattcaccttgaagttttattgttcctttcaaaa 115  Q
    |||||| || |||||||||  |||||||||||||||| ||||||||||||||||||||||||    
T  20192585 tcaaacttgctaaacaacaattctcaagcattcacctggaagttttattgttcctttcaaaa 20192646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 20242069 - 20242008
Alignment:
Q  54 tcaaacctgttaaacaacagctctcaagcattcaccttgaagttttattgttcctttcaaaa 115  Q
    |||||| || |||||||||  |||||||||||||||| ||||||||||||||||||||||||    
T  20242069 tcaaacttgctaaacaacaattctcaagcattcacctggaagttttattgttcctttcaaaa 20242008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 22136053 - 22135992
Alignment:
Q  54 tcaaacctgttaaacaacagctctcaagcattcaccttgaagttttattgttcctttcaaaa 115  Q
    |||||| || |||||||||  |||||||||||||||| ||||||||||||||||||||||||    
T  22136053 tcaaacttgctaaacaacaattctcaagcattcacctggaagttttattgttcctttcaaaa 22135992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 22143406 - 22143345
Alignment:
Q  54 tcaaacctgttaaacaacagctctcaagcattcaccttgaagttttattgttcctttcaaaa 115  Q
    |||||| || |||||||||  |||||||||||||||| ||||||||||||||||||||||||    
T  22143406 tcaaacttgctaaacaacaattctcaagcattcacctggaagttttattgttcctttcaaaa 22143345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 291 - 372
Target Start/End: Original strand, 20244736 - 20244821
Alignment:
Q  291 tgactcatcttatatgagggaatttgatgtgataac----atatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    |||||||  ||||||||||||||| ||||| | |||    ||||||||||||||| ||| ||||||||||||||||||||||||||    
T  20244736 tgactcaatttatatgagggaattcgatgtaagaacttatatatatagttgatttggtataatacatgtgttgtgttctcttcatt 20244821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 291 - 372
Target Start/End: Original strand, 22138720 - 22138805
Alignment:
Q  291 tgactcatcttatatgagggaatttgatgtgataac----atatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    |||||||  ||||||||||||||| ||||| | |||    ||||||||||||||| ||| ||||||||||||||||||||||||||    
T  22138720 tgactcaatttatatgagggaattcgatgtaagaacttatatatatagttgatttggtataatacatgtgttgtgttctcttcatt 22138805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 125 - 185
Target Start/End: Original strand, 24560042 - 24560102
Alignment:
Q  125 tgtctttattttgttggagtttaaattaaattcttgttagtttactaaagatgttggtatt 185  Q
    |||||||||||||||||| |||||||| ||||||||||||||| || || |||||||||||    
T  24560042 tgtctttattttgttggaatttaaatttaattcttgttagtttgctgaatatgttggtatt 24560102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 3097491 - 3097432
Alignment:
Q  126 gtctttattttgttggagtttaaattaaattcttgttagtttactaaagatgttggtatt 185  Q
    ||||||||||||||||| |||||||| ||||||||||||||| || ||||||||| ||||    
T  3097491 gtctttattttgttggaatttaaatttaattcttgttagtttgctgaagatgttgatatt 3097432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 64 - 115
Target Start/End: Original strand, 20241794 - 20241845
Alignment:
Q  64 taaacaacagctctcaagcattcaccttgaagttttattgttcctttcaaaa 115  Q
    |||||||| |||||||||||||||||  ||||||||||||||||||||||||    
T  20241794 taaacaactgctctcaagcattcacccagaagttttattgttcctttcaaaa 20241845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 64 - 115
Target Start/End: Original strand, 22135778 - 22135829
Alignment:
Q  64 taaacaacagctctcaagcattcaccttgaagttttattgttcctttcaaaa 115  Q
    |||||||| |||||||||||||||||  ||||||||||||||||||||||||    
T  22135778 taaacaactgctctcaagcattcacccagaagttttattgttcctttcaaaa 22135829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 64 - 115
Target Start/End: Original strand, 22143131 - 22143182
Alignment:
Q  64 taaacaacagctctcaagcattcaccttgaagttttattgttcctttcaaaa 115  Q
    |||||||| |||||||||||||||||  ||||||||||||||||||||||||    
T  22143131 taaacaactgctctcaagcattcacccagaagttttattgttcctttcaaaa 22143182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 281 - 372
Target Start/End: Original strand, 24560359 - 24560450
Alignment:
Q  281 ctttatgtgatgactcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    ||||||||| ||||||||| ||||||| ||  ||  |||||||||| |||| ||||| |||  || ||||||||||||||||||||||||||    
T  24560359 ctttatgtggtgactcatcctatatgaaggggttcaatgtgataacctataaagttgttttgctataatacatgtgttgtgttctcttcatt 24560450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 293 - 359
Target Start/End: Complemental strand, 18743635 - 18743569
Alignment:
Q  293 actcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttg 359  Q
    |||||| |||||||||||||||  |||||| ||  |||||||||||||||||||||| |||||||||    
T  18743635 actcattttatatgagggaattcaatgtgagaatttatatagttgattttgtagaatgcatgtgttg 18743569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 21864872 - 21864814
Alignment:
Q  127 tctttattttgttggagtttaaattaaattcttgttagtttactaaagatgttggtatt 185  Q
    |||||||||||||||| ||||| || ||||||||||||||| || ||||||||||||||    
T  21864872 tctttattttgttggaatttaagtttaattcttgttagtttgctgaagatgttggtatt 21864814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 281 - 368
Target Start/End: Original strand, 33200913 - 33201004
Alignment:
Q  281 ctttatgtgatgactcatcttatatgagggaatttgatgtgataacatatatag----ttgattttgtagaatacatgtgttgtgttctctt 368  Q
    ||||||||||||||||||||||||||||||||||  |||| | ||  |||||||    || |||| |||||||||| |||||||||||||||    
T  33200913 ctttatgtgatgactcatcttatatgagggaattctatgtcaaaatttatatagttaattaatttggtagaatacaagtgttgtgttctctt 33201004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 279 - 372
Target Start/End: Complemental strand, 3097197 - 3097104
Alignment:
Q  279 ttctttatgtgatgactcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    |||||| |||||| |||||| |||||||||| || | ||||||| ||  ||||||||||||||  ||||||| ||||||||| ||||| |||||    
T  3097197 ttctttgtgtgattactcattttatatgaggaaaatcgatgtgagaatttatatagttgatttgatagaatatatgtgttgtattctcatcatt 3097104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 18743964 - 18743895
Alignment:
Q  116 attaggtaatgtctttattttgttggagtttaaattaaattcttgttagtttactaaagatgttggtatt 185  Q
    |||| ||| |||||||||||| ||||| ||||| || ||||||||||||||| || ||||||||||||||    
T  18743964 attatgtagtgtctttattttcttggaatttaagtttaattcttgttagtttgctgaagatgttggtatt 18743895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 293 - 352
Target Start/End: Original strand, 23607796 - 23607855
Alignment:
Q  293 actcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaataca 352  Q
    ||||||||||||||| |||||| ||||||| ||| |||||||||||||  ||||||||||    
T  23607796 actcatcttatatgaaggaattcgatgtgaaaacctatatagttgattcagtagaataca 23607855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 434
Target Start/End: Original strand, 20244881 - 20244931
Alignment:
Q  384 caatattttcagtaaactttcaagaatttaatttaaatccagcatcatgat 434  Q
    ||||||||| || |||||||||||||||||||||||| ||| |||||||||    
T  20244881 caatatttttagcaaactttcaagaatttaatttaaacccaacatcatgat 20244931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 434
Target Start/End: Original strand, 22138865 - 22138915
Alignment:
Q  384 caatattttcagtaaactttcaagaatttaatttaaatccagcatcatgat 434  Q
    ||||||||| || |||||||||||||||||||||||| ||| |||||||||    
T  22138865 caatatttttagcaaactttcaagaatttaatttaaacccaacatcatgat 22138915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 2402417 - 2402486
Alignment:
Q  116 attaggtaatgtctttattttgttggagtttaaattaaattcttgttagtttactaaagatgttggtatt 185  Q
    |||| ||| |||||||  ||||||||| ||||| || ||||||||||||||| || ||||||||||||||    
T  2402417 attatgtattgtctttgctttgttggaatttaagtttaattcttgttagtttgctgaagatgttggtatt 2402486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 14095858 - 14095927
Alignment:
Q  116 attaggtaatgtctttattttgttggagtttaaattaaattcttgttagtttactaaagatgttggtatt 185  Q
    |||| ||||||||||||||||||| || ||||| || |||||||||||||||    ||||||||||||||    
T  14095858 attatgtaatgtctttattttgtttgaatttaagtttaattcttgttagtttgtggaagatgttggtatt 14095927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 54 - 115
Target Start/End: Original strand, 14482479 - 14482540
Alignment:
Q  54 tcaaacctgttaaacaacagctctcaagcattcaccttgaagttttattgttcctttcaaaa 115  Q
    |||||| || ||||||||| ||||||||||||||||   ||||||||||||||| |||||||    
T  14482479 tcaaacttgctaaacaacaactctcaagcattcacccgaaagttttattgttccattcaaaa 14482540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 22 - 112
Target Start/End: Original strand, 34134880 - 34134975
Alignment:
Q  22 aactacaacaattgtcttacctctgaataagg------tcaaacctgttaaacaacagctctcaagcattcaccttgaagttttattgttcctttca 112  Q
    ||||||||||||||||||||||||||| | ||      |||||| || |||||||||| || ||||||||||||   ||||||||||||||||||||    
T  34134880 aactacaacaattgtcttacctctgaa-atggaataattcaaacttgctaaacaacagttcccaagcattcacccgaaagttttattgttcctttca 34134975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 200 - 260
Target Start/End: Original strand, 14482546 - 14482606
Alignment:
Q  200 atgtattatgcagaatcaactatataagttatgatatcaaattccttcatataagatgagt 260  Q
    |||||||||||||||||||||||||| ||| | | ||| |||| |||||||||||| ||||    
T  14482546 atgtattatgcagaatcaactatatatgttttcacatcgaatttcttcatataagacgagt 14482606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 372
Target Start/End: Complemental strand, 24560218 - 24560157
Alignment:
Q  309 ggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    |||||| ||||||| ||| |||||||||||||| ||| ||||||  ||||||||||||||||||    
T  24560218 ggaattcgatgtgaaaacctatatagttgatttggtaaaataca--tgttgtgttctcttcatt 24560157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 125 - 185
Target Start/End: Original strand, 33200341 - 33200400
Alignment:
Q  125 tgtctttattttgttggagtttaaattaaattcttgttagtttactaaagatgttggtatt 185  Q
    |||||||||||||||||||||||| || ||||||| ||||||| || ||||||||| ||||    
T  33200341 tgtctttattttgttggagtttaagtt-aattcttattagtttgctgaagatgttgctatt 33200400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 383 - 437
Target Start/End: Original strand, 3386356 - 3386410
Alignment:
Q  383 acaatattttcagtaaactttcaagaatttaatttaaatccagcatcatgatgat 437  Q
    |||||||||||  |||||||||| |||||||| |||||||||  |||||||||||    
T  3386356 acaatattttcgataaactttcatgaatttaaattaaatccaatatcatgatgat 3386410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 60 - 114
Target Start/End: Original strand, 4913681 - 4913735
Alignment:
Q  60 ctgttaaacaacagctctcaagcattcaccttgaagttttattgttcctttcaaa 114  Q
    |||| ||||| |||||||||||||||||||  ||| |||||| ||||||||||||    
T  4913681 ctgtgaaacagcagctctcaagcattcacccagaaattttatcgttcctttcaaa 4913735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 391 - 437
Target Start/End: Original strand, 14096332 - 14096378
Alignment:
Q  391 ttcagtaaactttcaagaatttaatttaaatccagcatcatgatgat 437  Q
    |||||||||||||||| |||||||||||||| || | ||||||||||    
T  14096332 ttcagtaaactttcaacaatttaatttaaattcaacgtcatgatgat 14096378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 192 - 266
Target Start/End: Original strand, 20244532 - 20244606
Alignment:
Q  192 aacacaaaatgtattatgcagaatcaactatataagttatgatatcaaattccttcatataagatgagtgtcaca 266  Q
    ||||||| ||||||| ||| ||||||||| |||| ||| | | | |||| |||||| ||||||||||||||||||    
T  20244532 aacacaacatgtattctgccgaatcaactgtatatgttttcacaccaaagtccttcgtataagatgagtgtcaca 20244606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 192 - 266
Target Start/End: Original strand, 22138516 - 22138590
Alignment:
Q  192 aacacaaaatgtattatgcagaatcaactatataagttatgatatcaaattccttcatataagatgagtgtcaca 266  Q
    ||||||| ||||||| ||| ||||||||| |||| ||| | | | |||| |||||| ||||||||||||||||||    
T  22138516 aacacaacatgtattctgccgaatcaactgtatatgttttcacaccaaagtccttcgtataagatgagtgtcaca 22138590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 212 - 262
Target Start/End: Complemental strand, 23607844 - 23607794
Alignment:
Q  212 gaatcaactatataagttatgatatcaaattccttcatataagatgagtgt 262  Q
    |||||||||||||| ||| | | ||| ||||||||||||||||||||||||    
T  23607844 gaatcaactatataggttttcacatcgaattccttcatataagatgagtgt 23607794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 266 - 296
Target Start/End: Original strand, 28051738 - 28051768
Alignment:
Q  266 agaatgcacctcattctttatgtgatgactc 296  Q
    |||||||||||||||||||||||||||||||    
T  28051738 agaatgcacctcattctttatgtgatgactc 28051768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 260
Target Start/End: Original strand, 20241845 - 20241910
Alignment:
Q  195 acaaaatgtattatgcagaatcaactatataagttatgatatcaaattccttcatataagatgagt 260  Q
    |||| |||||||||||| ||||| ||||||| ||||| | ||| |||||| |||||||||| ||||    
T  20241845 acaacatgtattatgcacaatcatctatatatgttatcacatcgaattccctcatataagacgagt 20241910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 260
Target Start/End: Original strand, 22135829 - 22135894
Alignment:
Q  195 acaaaatgtattatgcagaatcaactatataagttatgatatcaaattccttcatataagatgagt 260  Q
    |||| |||||||||||| ||||| ||||||| ||||| | ||| |||||| |||||||||| ||||    
T  22135829 acaacatgtattatgcacaatcatctatatatgttatcacatcgaattccctcatataagacgagt 22135894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 260
Target Start/End: Original strand, 22143182 - 22143247
Alignment:
Q  195 acaaaatgtattatgcagaatcaactatataagttatgatatcaaattccttcatataagatgagt 260  Q
    |||| |||||||||||| ||||| ||||||| ||||| | ||| |||||| |||||||||| ||||    
T  22143182 acaacatgtattatgcacaatcatctatatatgttatcacatcgaattccctcatataagacgagt 22143247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 293 - 372
Target Start/End: Complemental strand, 2402616 - 2402539
Alignment:
Q  293 actcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    ||||||||||||  ||| |||| ||||||| ||| ||||||| |||||||| | ||| ||  ||||||||||||||||||    
T  2402616 actcatcttatacaaggaaattcgatgtgaaaacctatatagctgattttgcataatgca--tgttgtgttctcttcatt 2402539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 293 - 341
Target Start/End: Complemental strand, 22962090 - 22962042
Alignment:
Q  293 actcatcttatatgagggaatttgatgtgataacatatatagttgattt 341  Q
    |||||||||||||||| ||||| ||||||| ||| ||||||||| ||||    
T  22962090 actcatcttatatgagagaattcgatgtgagaacctatatagtttattt 22962042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 293 - 341
Target Start/End: Original strand, 23826303 - 23826351
Alignment:
Q  293 actcatcttatatgagggaatttgatgtgataacatatatagttgattt 341  Q
    |||||||||||||||| ||||| ||||||| ||| ||||||||| ||||    
T  23826303 actcatcttatatgagagaattcgatgtgagaacctatatagtttattt 23826351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 437
Target Start/End: Complemental strand, 30764460 - 30764420
Alignment:
Q  397 aaactttcaagaatttaatttaaatccagcatcatgatgat 437  Q
    ||||||||||||||| |||||||||||| ||| ||||||||    
T  30764460 aaactttcaagaattaaatttaaatccaacattatgatgat 30764420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 116; Significance: 8e-59; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 200 - 355
Target Start/End: Complemental strand, 16531708 - 16531553
Alignment:
Q  200 atgtattatgcagaatcaactatataagttatgatatcaaattccttcatataagatgagtgtcacagaatgcacctcattctttatgtgatgactcatc 299  Q
    |||||||||  ||||||| |||||||| |||||||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||| | ||||    
T  16531708 atgtattattgagaatcagctatataaattatgatatcgaattccttgatataagatgagtgccacagaatgcacctcattctttatgtgatggcccatc 16531609  T
Q  300 ttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgt 355  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  16531608 ttatatgagggaatttgatgtgataacatatatagttgattttgtataatacatgt 16531553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 200 - 339
Target Start/End: Original strand, 5766083 - 5766220
Alignment:
Q  200 atgtattatgcagaatcaactatataagttatgatatcaaattccttcatataagatgagtgtcacagaatgcacctcattctttatgtgatgactcatc 299  Q
    |||||||||  ||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||| |||||||||||| |||| ||    
T  5766083 atgtattattgagaatcaactatataagttatgatatcgaattccttcatataa--tgagtgtcacagaatgcacctcagtctttatgtgattactcgtc 5766180  T
Q  300 ttatatgagggaatttgatgtgataacatatatagttgat 339  Q
    |||||||| ||||||||| ||||||| |||||||||||||    
T  5766181 ttatatgaaggaatttgaggtgataatatatatagttgat 5766220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 200 - 339
Target Start/End: Original strand, 18843044 - 18843183
Alignment:
Q  200 atgtattatgcagaatcaactatataagttatgatatcaaattccttcatataagatgagtgtcacagaatgcacctcattctttatgtgatgactcatc 299  Q
    |||||||||  | ||||| |||| |||||||||||||| |||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||    
T  18843044 atgtattattgaaaatcagctatgtaagttatgatatcgaatttcttcatataagatgagtgtcacggaatgcacctcagtctttatgtgatgactcgtc 18843143  T
Q  300 ttatatgagggaatttgatgtgataacatatatagttgat 339  Q
    |||||||| |||||||||||||||||| ||||||||||||    
T  18843144 ttatatgaaggaatttgatgtgataacgtatatagttgat 18843183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 279 - 372
Target Start/End: Complemental strand, 27574898 - 27574807
Alignment:
Q  279 ttctttatgtgatgactcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    |||||||||||||||||||||||||||||| ||||| ||||||| ||| |||| |||||||||  ||||||||||||||  |||||||||||||    
T  27574898 ttctttatgtgatgactcatcttatatgagagaattcgatgtgaaaacctataaagttgatttgctagaatacatgtgt--tgttctcttcatt 27574807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 293 - 372
Target Start/End: Complemental strand, 48706557 - 48706478
Alignment:
Q  293 actcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    |||||||||||||||||||||| ||||| ||||| |||||| ||||||  ||||||||||||| ||||||||||||||||    
T  48706557 actcatcttatatgagggaattcgatgttataacctatatatttgattcggtagaatacatgtattgtgttctcttcatt 48706478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 281 - 363
Target Start/End: Complemental strand, 11788809 - 11788727
Alignment:
Q  281 ctttatgtgatgactcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgtt 363  Q
    |||| |||||||||||||||||||||| || ||| |||||||||||||| ||||||||||| ||| |||||  ||||||||||    
T  11788809 ctttctgtgatgactcatcttatatgaagggattcgatgtgataacatacatagttgatttggtataatactagtgttgtgtt 11788727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 19262401 - 19262332
Alignment:
Q  116 attaggtaatgtctttattttgttggagtttaaattaaattcttgttagtttactaaagatgttggtatt 185  Q
    |||| ||| |||||||||||||||||| ||||| || ||||||||||||||| |||||||||||||||||    
T  19262401 attatgtagtgtctttattttgttggaatttaagtttaattcttgttagtttgctaaagatgttggtatt 19262332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 288 - 372
Target Start/End: Original strand, 27259840 - 27259922
Alignment:
Q  288 tgatgactcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    |||||||||||| ||||||| || ||| ||||||| ||||||||||||||||| |||||||||||| |||  |||||||||||||    
T  27259840 tgatgactcatcctatatgaagggattcgatgtgaaaacatatatagttgattatgtagaatacatttgt--tgttctcttcatt 27259922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 301 - 372
Target Start/End: Original strand, 27800227 - 27800298
Alignment:
Q  301 tatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    ||||||| || ||| ||||| |||||||||||||||||||  |||||||||||||||||| |||||||||||    
T  27800227 tatatgaagggattggatgtaataacatatatagttgattcggtagaatacatgtgttgtattctcttcatt 27800298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 281 - 358
Target Start/End: Complemental strand, 19262074 - 19261996
Alignment:
Q  281 ctttatgtgatgactcatcttatatgagggaatttgatgtgataa-catatatagttgattttgtagaatacatgtgtt 358  Q
    ||||||||||||||||||| ||||||| || ||| ||||||| || | ||||||| |||||||||||||||||||||||    
T  19262074 ctttatgtgatgactcatcctatatgaagggattagatgtgaaaaacctatatagatgattttgtagaatacatgtgtt 19261996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 11789124 - 11789065
Alignment:
Q  126 gtctttattttgttggagtttaaattaaattcttgttagtttactaaagatgttggtatt 185  Q
    ||||||||||||||||| || || || |||||||||||||||||| ||||||||||||||    
T  11789124 gtctttattttgttggaattaaagtttaattcttgttagtttactgaagatgttggtatt 11789065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 317 - 372
Target Start/End: Complemental strand, 22923383 - 22923328
Alignment:
Q  317 atgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    |||||||||| |||| ||||||||  ||||||||||||||||||||||||||||||    
T  22923383 atgtgataacctataaagttgattcagtagaatacatgtgttgtgttctcttcatt 22923328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 294 - 372
Target Start/End: Original strand, 26089138 - 26089216
Alignment:
Q  294 ctcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    |||||| ||||||| || ||| ||||||| ||| ||||||||||||||  |||||||| ||||||||||||| ||||||    
T  26089138 ctcatcctatatgaagggattcgatgtgagaacttatatagttgatttgctagaatacctgtgttgtgttcttttcatt 26089216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 54 - 115
Target Start/End: Original strand, 14772291 - 14772352
Alignment:
Q  54 tcaaacctgttaaacaacagctctcaagcattcaccttgaagttttattgttcctttcaaaa 115  Q
    ||||||||| |||||||||||||||| ||||||||   |||||| |||||||||||||||||    
T  14772291 tcaaacctgctaaacaacagctctcatgcattcacacggaagttctattgttcctttcaaaa 14772352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 310 - 372
Target Start/End: Original strand, 19262217 - 19262277
Alignment:
Q  310 gaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    ||||||||||||| ||| ||||||||||||| || ||||||||  ||||||||||||||||||    
T  19262217 gaatttgatgtgaaaacctatatagttgattctgcagaataca--tgttgtgttctcttcatt 19262277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 389 - 436
Target Start/End: Original strand, 27259987 - 27260034
Alignment:
Q  389 ttttcagtaaactttcaagaatttaatttaaatccagcatcatgatga 436  Q
    ||||| |||||||||||| ||||||||||||||||| |||||||||||    
T  27259987 ttttccgtaaactttcaacaatttaatttaaatccaacatcatgatga 27260034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 265
Target Start/End: Complemental strand, 19262273 - 19262195
Alignment:
Q  187 aagacaacacaaaatgtattatgcagaatcaactatataagttatgatatcaaattccttcatataagatgagtgtcac 265  Q
    |||| ||||||| ||||||| |||||||||||||||||| ||| | | ||||||||| ||| | || ||||||||||||    
T  19262273 aagagaacacaacatgtattctgcagaatcaactatataggttttcacatcaaattcattcgtttaggatgagtgtcac 19262195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 293 - 350
Target Start/End: Complemental strand, 16279095 - 16279038
Alignment:
Q  293 actcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaata 350  Q
    |||||| |||||| |||||||| ||||||| ||| |||||||||||||| ||||||||    
T  16279095 actcatattatattagggaattcgatgtgaaaacctatatagttgatttggtagaata 16279038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 200 - 257
Target Start/End: Original strand, 16531555 - 16531612
Alignment:
Q  200 atgtattatgcagaatcaactatataagttatgatatcaaattccttcatataagatg 257  Q
    ||||||||| || ||||||||||||| ||||| | |||||||||| ||||||||||||    
T  16531555 atgtattatacaaaatcaactatatatgttatcacatcaaattccctcatataagatg 16531612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 54 - 115
Target Start/End: Original strand, 31451799 - 31451860
Alignment:
Q  54 tcaaacctgttaaacaacagctctcaagcattcaccttgaagttttattgttcctttcaaaa 115  Q
    ||||||||  |||| |||| ||||||||||||||||  |||||| |||||||||||||||||    
T  31451799 tcaaacctactaaataacaactctcaagcattcaccccgaagttctattgttcctttcaaaa 31451860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 397 - 437
Target Start/End: Original strand, 27800367 - 27800407
Alignment:
Q  397 aaactttcaagaatttaatttaaatccagcatcatgatgat 437  Q
    |||||||||||||||||||||||||||| ||||| ||||||    
T  27800367 aaactttcaagaatttaatttaaatccaacatcacgatgat 27800407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 293 - 372
Target Start/End: Original strand, 15471989 - 15472068
Alignment:
Q  293 actcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    ||||||| ||||||| || ||| ||||||| ||| ||||||||| ||||  ||||||||||| | |||| ||||||||||    
T  15471989 actcatcctatatgaagggattcgatgtgaaaacttatatagttaatttgctagaatacatgcggtgtgctctcttcatt 15472068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 115
Target Start/End: Complemental strand, 16081774 - 16081724
Alignment:
Q  65 aaacaacagctctcaagcattcaccttgaagttttattgttcctttcaaaa 115  Q
    |||||||| ||||||||||||||||  ||||| |||||||||| |||||||    
T  16081774 aaacaacaactctcaagcattcacccggaagtgttattgttccattcaaaa 16081724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 214 - 260
Target Start/End: Complemental strand, 18843183 - 18843137
Alignment:
Q  214 atcaactatataagttatgatatcaaattccttcatataagatgagt 260  Q
    |||||||||||| ||||| | ||||||||||||||||||||| ||||    
T  18843183 atcaactatatacgttatcacatcaaattccttcatataagacgagt 18843137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 21760376 - 21760307
Alignment:
Q  116 attaggtaatgtctttattttgttggagtttaaattaaattcttgttagtttactaaagatgttggtatt 185  Q
    |||| ||| |||||||||||| ||||| ||||| || ||||||| |||||||  | ||||||||||||||    
T  21760376 attatgtagtgtctttattttattggaatttaagtttaattcttattagtttgttgaagatgttggtatt 21760307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 116 - 167
Target Start/End: Complemental strand, 48706892 - 48706840
Alignment:
Q  116 attaggtaatgtctttatttt-gttggagtttaaattaaattcttgttagttt 167  Q
    |||| |||||||||||||||| |||||| ||||| || |||||||||||||||    
T  48706892 attatgtaatgtctttatttttgttggaatttaagtttaattcttgttagttt 48706840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 112; Significance: 2e-56; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 200 - 339
Target Start/End: Complemental strand, 6463964 - 6463825
Alignment:
Q  200 atgtattatgcagaatcaactatataagttatgatatcaaattccttcatataagatgagtgtcacagaatgcacctcattctttatgtgatgactcatc 299  Q
    |||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||    
T  6463964 atgtattattgagaatcagctatataagttatgatatcaaattccttcatataagatgagtgtcacggaatgcaccttattctttatgtgatgactcgtc 6463865  T
Q  300 ttatatgagggaatttgatgtgataacatatatagttgat 339  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  6463864 ttatatgaaggaatttgatgtgataacatatatagttgat 6463825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 213 - 339
Target Start/End: Original strand, 6754818 - 6754944
Alignment:
Q  213 aatcaactatataagttatgatatcaaattccttcatataagatgagtgtcacagaatgcacctcattctttatgtgatgactcatcttatatgagggaa 312  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||    
T  6754818 aatcagctatataagttatgatatcaaattccttcatataagatgagtgtcacagaatgcaccttattctttatgtgatgactcgtcttatatgaaggaa 6754917  T
Q  313 tttgatgtgataacatatatagttgat 339  Q
    |||||||||||||||||||||||||||    
T  6754918 tttgatgtgataacatatatagttgat 6754944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 224 - 355
Target Start/End: Complemental strand, 25887198 - 25887067
Alignment:
Q  224 taagttatgatatcaaattccttcatataagatgagtgtcacagaatgcacctcattctttatgtgatgactcatcttatatgagggaatttgatgtgat 323  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||  ||||||||||||||    
T  25887198 taagttatgatatcgaattccttcatataagatgagtgtcacagaatgcaactcattctttatgtgatgactcgtcttatatgattgaatttgatgtgat 25887099  T
Q  324 aacatatatagttgattttgtagaatacatgt 355  Q
    |||||||||||||||||||| | |||||||||    
T  25887098 aacatatatagttgattttgcataatacatgt 25887067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 227 - 343
Target Start/End: Complemental strand, 20375467 - 20375351
Alignment:
Q  227 gttatgatatcaaattccttcatataagatgagtgtcacagaatgcacctcattctttatgtgatgactcatcttatatgagggaatttgatgtgataac 326  Q
    ||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||     
T  20375467 gttatgatatcgaattccttcatataagatgagtgtcacgaaatgcacctcattctttatgtgatgactcgtcttatatgagggaatttgatgtgataat 20375368  T
Q  327 atatatagttgattttg 343  Q
    |||||||||||||||||    
T  20375367 atatatagttgattttg 20375351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 246 - 355
Target Start/End: Original strand, 14265669 - 14265778
Alignment:
Q  246 tcatataagatgagtgtcacagaatgcacctcattctttatgtgatgactcatcttatatgagggaatttgatgtgataacatatatagttgattttgta 345  Q
    ||||||||||||||||||||  |||| |||||||||||||||| ||||||| |||||| |||||||||| ||||||||||||||||||||||||| || |    
T  14265669 tcatataagatgagtgtcacgaaatggacctcattctttatgtaatgactcgtcttatttgagggaattcgatgtgataacatatatagttgattctgca 14265768  T
Q  346 gaatacatgt 355  Q
     |||||||||    
T  14265769 taatacatgt 14265778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 287 - 372
Target Start/End: Complemental strand, 50342023 - 50341938
Alignment:
Q  287 gtgatgactcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    |||||||||||| |||||||| |||||| ||| || | |||||||||||||||||||||||||||| |||||||||||||||||||    
T  50342023 gtgatgactcattttatatgaaggaattcgatatggtcacatatatagttgattttgtagaatacacgtgttgtgttctcttcatt 50341938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 293 - 371
Target Start/End: Original strand, 17371364 - 17371442
Alignment:
Q  293 actcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcat 371  Q
    ||||||||||||||||  |||| ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||    
T  17371364 actcatcttatatgagcaaattcgatgtgataacctataaagttgattttgtagaatacatgtgttgtgttcttttcat 17371442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 295 - 372
Target Start/End: Complemental strand, 29787891 - 29787814
Alignment:
Q  295 tcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    ||||||||||||| |||||||||||||| ||| |||||||||||||  |||||||||||||| |||||||||||||||    
T  29787891 tcatcttatatgaaggaatttgatgtgagaacctatatagttgattcggtagaatacatgtgatgtgttctcttcatt 29787814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 281 - 372
Target Start/End: Complemental strand, 20409432 - 20409341
Alignment:
Q  281 ctttatgtgatgactcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    |||| ||||| |||||||| ||||||| || |||  |||||||||| |||||||||||||  ||||||||||||||||||||||||||||||    
T  20409432 ctttttgtgacgactcatcctatatgaagggattcaatgtgataacttatatagttgattcagtagaatacatgtgttgtgttctcttcatt 20409341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 291 - 372
Target Start/End: Complemental strand, 29516728 - 29516647
Alignment:
Q  291 tgactcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    ||||||||||||||||||| ||||  |||||| ||| |||| ||||||||| ||||||||||||||||||||| ||||||||    
T  29516728 tgactcatcttatatgaggaaattcaatgtgaaaacctataaagttgatttggtagaatacatgtgttgtgttatcttcatt 29516647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 283 - 337
Target Start/End: Original strand, 7955224 - 7955278
Alignment:
Q  283 ttatgtgatgactcatcttatatgagggaatttgatgtgataacatatatagttg 337  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  7955224 ttatgtgatgactcgtcttatatgaaggaatttgatgtgataacatatatagttg 7955278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 316 - 372
Target Start/End: Complemental strand, 29634549 - 29634493
Alignment:
Q  316 gatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    |||||||||||||||| ||||||||| |||||||||||||||||  |||||||||||    
T  29634549 gatgtgataacatataaagttgatttggtagaatacatgtgttgcattctcttcatt 29634493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 294 - 368
Target Start/End: Complemental strand, 1886299 - 1886225
Alignment:
Q  294 ctcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctctt 368  Q
    |||||| ||||||| || ||| ||||||| ||| |||| |||||||||  |||||||||||||||||||||||||    
T  1886299 ctcatcctatatgaagggattcgatgtgagaacttatacagttgatttgctagaatacatgtgttgtgttctctt 1886225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 295 - 372
Target Start/End: Original strand, 1886342 - 1886417
Alignment:
Q  295 tcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    ||||||||||  | |||||| ||||||| |||||||||||||||||| ||| ||||||  ||||||||||||||||||    
T  1886342 tcatcttatacaacggaattcgatgtgaaaacatatatagttgatttggtaaaataca--tgttgtgttctcttcatt 1886417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 1638595 - 1638526
Alignment:
Q  116 attaggtaatgtctttattttgttggagtttaaattaaattcttgttagtttactaaagatgttggtatt 185  Q
    |||| ||| |||||||||||||||||| ||||| || ||||||||||| ||| || ||||||||||||||    
T  1638595 attacgtagtgtctttattttgttggaatttaagtttaattcttgttattttgctgaagatgttggtatt 1638526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 291 - 372
Target Start/End: Complemental strand, 55390585 - 55390504
Alignment:
Q  291 tgactcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    |||||| |||||||||||| |||| ||||||| ||| |||||||||||||  ||  |||||||||||| ||||||| |||||    
T  55390585 tgactcgtcttatatgaggaaattcgatgtgaaaacctatatagttgattcagttaaatacatgtgttatgttctcctcatt 55390504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 293 - 372
Target Start/End: Complemental strand, 11162681 - 11162602
Alignment:
Q  293 actcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    ||||||| ||||||| || |||  |||||| ||| |||| |||||||| | ||||||||||||||||| |||||||||||    
T  11162681 actcatcatatatgaagggattccatgtgaaaacctatacagttgattatatagaatacatgtgttgtattctcttcatt 11162602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 17267277 - 17267210
Alignment:
Q  116 attaggtaatgtctttattttgttggagtttaaattaaattcttgttagtttactaaagatgttggta 183  Q
    |||| |||||||||||||||||||| | ||||| || ||||||||||||||| || || |||||||||    
T  17267277 attatgtaatgtctttattttgttgtaatttaagtttaattcttgttagtttgctgaatatgttggta 17267210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 187 - 262
Target Start/End: Complemental strand, 20409629 - 20409554
Alignment:
Q  187 aagacaacacaaaatgtattatgcagaatcaactatataagttatgatatcaaattccttcatataagatgagtgt 262  Q
    |||| ||||||| ||||||| ||| |||||||||||||||||| | | ||| ||||||||| |||| |||||||||    
T  20409629 aagagaacacaacatgtattctgccgaatcaactatataagttttcacatcgaattccttcgtataggatgagtgt 20409554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 195 - 260
Target Start/End: Complemental strand, 14265781 - 14265716
Alignment:
Q  195 acaaaatgtattatgcagaatcaactatataagttatgatatcaaattccttcatataagatgagt 260  Q
    |||| |||||||||||||||||||||||||| ||||| | ||| |||||| ||| |||||| ||||    
T  14265781 acaacatgtattatgcagaatcaactatatatgttatcacatcgaattccctcaaataagacgagt 14265716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 388 - 437
Target Start/End: Complemental strand, 17266799 - 17266750
Alignment:
Q  388 attttcagtaaactttcaagaatttaatttaaatccagcatcatgatgat 437  Q
    |||||||| |||||||||||||| ||||||||| ||| ||||||||||||    
T  17266799 attttcagcaaactttcaagaatataatttaaacccaacatcatgatgat 17266750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 316 - 372
Target Start/End: Complemental strand, 17266916 - 17266862
Alignment:
Q  316 gatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    ||||||| |||||||||||||||||| || ||||||||||||  |||||||||||||    
T  17266916 gatgtgaaaacatatatagttgatttggtggaatacatgtgt--tgttctcttcatt 17266862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 293 - 377
Target Start/End: Original strand, 20409556 - 20409638
Alignment:
Q  293 actcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatttttgt 377  Q
    ||||||| |||| || |||||| ||||||| ||| |||||||||||||  | ||||||||  |||||||||||||||||| ||||    
T  20409556 actcatcctatacgaaggaattcgatgtgaaaacttatatagttgattcggcagaataca--tgttgtgttctcttcattcttgt 20409638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 195 - 260
Target Start/End: Original strand, 25887064 - 25887129
Alignment:
Q  195 acaaaatgtattatgcagaatcaactatataagttatgatatcaaattccttcatataagatgagt 260  Q
    |||| |||||||||||| ||||||||||||| ||||| | |||||||||  |||||||||| ||||    
T  25887064 acaacatgtattatgcaaaatcaactatatatgttatcacatcaaattcaatcatataagacgagt 25887129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 384 - 437
Target Start/End: Complemental strand, 29515719 - 29515666
Alignment:
Q  384 caatattttcagtaaactttcaagaatttaatttaaatccagcatcatgatgat 437  Q
    ||||||||| || |||||||||| |||||||||||| |||| ||||||||||||    
T  29515719 caatattttgagaaaactttcaataatttaatttaactccaacatcatgatgat 29515666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 125 - 185
Target Start/End: Complemental strand, 50342602 - 50342542
Alignment:
Q  125 tgtctttattttgttggagtttaaattaaattcttgttagtttactaaagatgttggtatt 185  Q
    ||||||||||||||||||  |||| || ||||||||||||||| || ||| ||||||||||    
T  50342602 tgtctttattttgttggaaattaattttaattcttgttagtttgctgaagttgttggtatt 50342542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 293 - 372
Target Start/End: Complemental strand, 25156013 - 25155935
Alignment:
Q  293 actcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    ||||||||||||||| || |||  |||||| ||| |||||||||||||| |||||| ||||||| ||  |||||||||||    
T  25156013 actcatcttatatgaagggattctatgtgagaacctatatagttgatttggtagaa-acatgtgatgcattctcttcatt 25155935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 262
Target Start/End: Complemental strand, 50342484 - 50342409
Alignment:
Q  187 aagacaacacaaaatgtattatgcagaatcaactatataagttatgatatcaaattccttcatataagatgagtgt 262  Q
    |||| ||||||| ||||||| |||||||||||||||||| ||||  | ||| ||||||||| ||||  ||||||||    
T  50342484 aagaaaacacaacatgtattctgcagaatcaactatataggttaccacatcgaattccttcgtatagaatgagtgt 50342409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 214 - 260
Target Start/End: Original strand, 6463825 - 6463871
Alignment:
Q  214 atcaactatataagttatgatatcaaattccttcatataagatgagt 260  Q
    |||||||||||| ||||| | ||||||||||||||||||||| ||||    
T  6463825 atcaactatatatgttatcacatcaaattccttcatataagacgagt 6463871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 214 - 260
Target Start/End: Complemental strand, 6754944 - 6754898
Alignment:
Q  214 atcaactatataagttatgatatcaaattccttcatataagatgagt 260  Q
    |||||||||||| ||||| | ||||||||||||||||||||| ||||    
T  6754944 atcaactatatatgttatcacatcaaattccttcatataagacgagt 6754898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 212 - 258
Target Start/End: Original strand, 29787845 - 29787891
Alignment:
Q  212 gaatcaactatataagttatgatatcaaattccttcatataagatga 258  Q
    |||||||||||||| ||| | | ||||||||||||||||||||||||    
T  29787845 gaatcaactatataggttctcacatcaaattccttcatataagatga 29787891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 342
Target Start/End: Complemental strand, 6754865 - 6754816
Alignment:
Q  293 actcatcttatatgagggaatttgatgtgataacatatatagttgatttt 342  Q
    ||||||||||||||| |||||||||| | ||||| ||||||| |||||||    
T  6754865 actcatcttatatgaaggaatttgatatcataacttatatagctgatttt 6754816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 260
Target Start/End: Original strand, 20375336 - 20375401
Alignment:
Q  195 acaaaatgtattatgcagaatcaactatataagttatgatatcaaattccttcatataagatgagt 260  Q
    |||| |||||| ||||| |||||||||||||  |||| | |||||||||| |||||||||| ||||    
T  20375336 acaacatgtatcatgcaaaatcaactatatatattatcacatcaaattccctcatataagacgagt 20375401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 115
Target Start/End: Complemental strand, 25887528 - 25887491
Alignment:
Q  78 caagcattcaccttgaagttttattgttcctttcaaaa 115  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  25887528 caagcattcacccggaagttttattgttcctttcaaaa 25887491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 216 - 260
Target Start/End: Complemental strand, 7955278 - 7955234
Alignment:
Q  216 caactatataagttatgatatcaaattccttcatataagatgagt 260  Q
    |||||||||| ||||| | ||||||||||||||||||||| ||||    
T  7955278 caactatatatgttatcacatcaaattccttcatataagacgagt 7955234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 54
Target Start/End: Complemental strand, 27187866 - 27187834
Alignment:
Q  22 aactacaacaattgtcttacctctgaataaggt 54  Q
    |||||||||||||||||||||||||||| ||||    
T  27187866 aactacaacaattgtcttacctctgaatgaggt 27187834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 336 - 372
Target Start/End: Complemental strand, 29515814 - 29515778
Alignment:
Q  336 tgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    |||||| ||||||||||||||||||||| ||||||||    
T  29515814 tgatttggtagaatacatgtgttgtgttatcttcatt 29515778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 108; Significance: 4e-54; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 54 - 264
Target Start/End: Original strand, 11824914 - 11825121
Alignment:
Q  54 tcaaacctgttaaacaacagctctcaagcattcaccttgaagttttattgttcctttcaaaaattaggtaatgtctttattttgttggagtttaaattaa 153  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||||||||||| |||||||||||| ||||||| |||||||||| ||||||||||    
T  11824914 tcaaacctgttaaacaacagctctcaagcattcacccgaaagttttattgttccttttaaaaattaggtagtgtctttcttttgttggaatttaaattaa 11825013  T
Q  154 attcttgttagtttactaaagatgttggtattaaagacaacacaaaatgtattatgcagaatcaactatataagttatgatatcaaattccttcatataa 253  Q
    ||||||||| ||||   |||  |      ||| |||| ||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  11825014 attcttgttggttt--gaaaagtcaaaagatt-aagagaacacaacatgtattatgcagaatcaactatataagttatgatatcgaatttcttcatataa 11825110  T
Q  254 gatgagtgtca 264  Q
    |||||||||||    
T  11825111 gatgagtgtca 11825121  T

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Target: chr7; HSP #2
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 187 - 372
Target Start/End: Original strand, 18149898 - 18150083
Alignment:
Q  187 aagacaacacaaaatgtattatgcagaatcaactatataagttatgatatcaaattccttcatataagatgagtgtcacagaatgcacctcattctttat 286  Q
    |||| ||||||| ||||||||| ||||||   ||||||||||||||||||| ||||||| ||||||||| ||  ||||||||||||||||||||||||||    
T  18149898 aagagaacacaacatgtattatacagaattcgctatataagttatgatatcgaattcctccatataagaggaaagtcacagaatgcacctcattctttat 18149997  T
Q  287 gtgatgactcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    |||||||||| | ||||| || ||||||  || |||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  18149998 gtgatgactcgttttataagacggaattcaatttgataacatatacagttgattttgtagaatacatatgttgtgttctcttcatt 18150083  T

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Target: chr7; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 201 - 355
Target Start/End: Complemental strand, 1642207 - 1642053
Alignment:
Q  201 tgtattatgcagaatcaactatataagttatgatatcaaattccttcatataagatgagtgtcacagaatgcacctcattctttatgtgatgactcatct 300  Q
    ||||||||  ||||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||| | ||||||||||||| | |||    
T  1642207 tgtattattgagaatcagctatataagttatgatatcaaattccttcatataagatgagtgcaacagaatgcacatcactttttatgtgatgacccgtct 1642108  T
Q  301 tatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgt 355  Q
    |||||||||||||||||| ||||||||||||||||||||| || | |||||||||    
T  1642107 tatatgagggaatttgatatgataacatatatagttgattctgcataatacatgt 1642053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 260 - 384
Target Start/End: Complemental strand, 3380441 - 3380317
Alignment:
Q  260 tgtcacagaatgcacctcattctttatgtgatgactcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttg 359  Q
    |||||| ||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  3380441 tgtcacggaatgcacctcatgctttatgtgatgactcgtcttatatgagggaattcgatgtgataacatatatagtttattttgtagaatacatgtgttg 3380342  T
Q  360 tgttctcttcatttttgtaagacac 384  Q
    ||||||||||||| || ||||||||    
T  3380341 tgttctcttcattcttataagacac 3380317  T

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Target: chr7; HSP #5
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 26 - 167
Target Start/End: Complemental strand, 3380650 - 3380502
Alignment:
Q  26 acaacaattgtcttacctctgaa------taaggtcaaacctgttaaacaacagctctcaagcattcaccttgaagttttattgttcctttca-aaaatt 118  Q
    |||||||||||||||||||||||      ||||||||||||| |||||||||| |||||||||||| |||  ||||||||||||||||||||| ||||||    
T  3380650 acaacaattgtcttacctctgaaattggataaggtcaaacctattaaacaacaactctcaagcatttacccggaagttttattgttcctttcaaaaaatt 3380551  T
Q  119 aggtaatgtctttattttgttggagtttaaattaaattcttgttagttt 167  Q
    ||||| |||||||||||||||||| ||||||||||||||||||| ||||    
T  3380550 aggtagtgtctttattttgttggaatttaaattaaattcttgttggttt 3380502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 239 - 339
Target Start/End: Original strand, 4230130 - 4230230
Alignment:
Q  239 aattccttcatataagatgagtgtcacagaatgcacctcattctttatgtgatgactcatcttatatgagggaatttgatgtgataacatatatagttga 338  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  4230130 aattccttcatataagatgagtgtcacagaatggacctcattctttatgcgatgactcgtcttatatgagggaattcgatgtgataacatatatagttga 4230229  T
Q  339 t 339  Q
    |    
T  4230230 t 4230230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 267 - 372
Target Start/End: Original strand, 11826436 - 11826541
Alignment:
Q  267 gaatgcacctcattctttatgtgatgactcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctc 366  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||| |||| ||||||| ||||||||||||    
T  11826436 gaatgcacctcattctttatatgatgactcatcttatatgaggtaattcgatgtgataacatatatagttgattatgtaaaatacatatgttgtgttctc 11826535  T
Q  367 ttcatt 372  Q
    ||||||    
T  11826536 ttcatt 11826541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 281 - 368
Target Start/End: Complemental strand, 5281867 - 5281780
Alignment:
Q  281 ctttatgtgatgactcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctctt 368  Q
    |||| ||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5281867 ctttttgtgatgactcattttatatgaaggaattcgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctctt 5281780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 150657 - 150739
Alignment:
Q  286 tgtgatgactcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctctt 368  Q
    ||||||||||  ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  150657 tgtgatgacttgtcttatatgagggaattcgatgtgataacatatataattgattttgtagaatacatgtgttgtgttctctt 150739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 292 - 364
Target Start/End: Original strand, 23553938 - 23554010
Alignment:
Q  292 gactcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttc 364  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||    
T  23553938 gactcatcttatatgagggaatttgatgtgataacctatatagttgatttgctagaatacatgtgttgtgttc 23554010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 187 - 277
Target Start/End: Original strand, 150459 - 150549
Alignment:
Q  187 aagacaacacaaaatgtattatgcagaatcaactatataagttatgatatcaaattccttcatataagatgagtgtcacagaatgcacctc 277  Q
    |||| |||| || |||||||||||| ||||||| ||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||    
T  150459 aagagaacataacatgtattatgcataatcaacaatataagttatgatatcgaattccttaatataagatgagtgtcacggaatgcacctc 150549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 281 - 372
Target Start/End: Original strand, 12083605 - 12083694
Alignment:
Q  281 ctttatgtgatgactcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    |||| ||||||||||||||||||||||||||||| ||||||| ||| ||||||| |||||||| |||||||||||||  |||||||||||||    
T  12083605 ctttctgtgatgactcatcttatatgagggaattcgatgtgaaaacgtatatagatgattttgaagaatacatgtgt--tgttctcttcatt 12083694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 293 - 372
Target Start/End: Complemental strand, 41934995 - 41934916
Alignment:
Q  293 actcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    |||||||||||| ||||||||| ||||||| |||||||||||||||||| ||||||| ||  ||||||||||||||||||    
T  41934995 actcatcttatacgagggaattcgatgtgaaaacatatatagttgatttggtagaatgcaactgttgtgttctcttcatt 41934916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 283 - 339
Target Start/End: Complemental strand, 21614056 - 21614000
Alignment:
Q  283 ttatgtgatgactcatcttatatgagggaatttgatgtgataacatatatagttgat 339  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  21614056 ttatgtgatgactcgtcttatatgaaggaatttgatgtgataacatatatagttgat 21614000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 48 - 120
Target Start/End: Complemental strand, 5282406 - 5282334
Alignment:
Q  48 ataaggtcaaacctgttaaacaacagctctcaagcattcaccttgaagttttattgttcctttcaaaaattag 120  Q
    ||||||| ||||||||||||||||| |||||| |||||||||   ||||| ||||||||||||||||||||||    
T  5282406 ataaggttaaacctgttaaacaacaactctcatgcattcacccgaaagttctattgttcctttcaaaaattag 5282334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 200 - 255
Target Start/End: Original strand, 1642055 - 1642110
Alignment:
Q  200 atgtattatgcagaatcaactatataagttatgatatcaaattccttcatataaga 255  Q
    |||||||||||||||||||||||||| ||||| |||||||||||| ||||||||||    
T  1642055 atgtattatgcagaatcaactatatatgttatcatatcaaattccctcatataaga 1642110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 286 - 372
Target Start/End: Original strand, 28067614 - 28067698
Alignment:
Q  286 tgtgatgactcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    |||||||| ||||||||||| ||||||||  |||||| ||| ||||||| ||||||||||| ||||||||||  |||||||||||||    
T  28067614 tgtgatgattcatcttatataagggaattcaatgtgaaaacctatatagatgattttgtaggatacatgtgt--tgttctcttcatt 28067698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 116 - 189
Target Start/End: Original strand, 28066475 - 28066548
Alignment:
Q  116 attaggtaatgtctttattttgttggagtttaaattaaattcttgttagtttactaaagatgttggtattaaag 189  Q
    |||| ||| |||||||||||||||||| ||||| || |||||||||||||||||| ||||||| || |||||||    
T  28066475 attatgtagtgtctttattttgttggaatttaagtttaattcttgttagtttactgaagatgtcggaattaaag 28066548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 22 - 115
Target Start/End: Original strand, 21614451 - 21614549
Alignment:
Q  22 aactacaacaattgtcttacctctgaataaggt-----caaacctgttaaacaacagctctcaagcattcaccttgaagttttattgttcctttcaaaa 115  Q
    ||||||||||||| |||||||| ||||| ||||     ||||| ||| ||||||||||| ||||||||||| || |||||||||||||| | |||||||    
T  21614451 aactacaacaattatcttacctttgaatgaggtaaattcaaacttgtcaaacaacagctatcaagcattcatctggaagttttattgtttcattcaaaa 21614549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 187 - 265
Target Start/End: Original strand, 31267423 - 31267501
Alignment:
Q  187 aagacaacacaaaatgtattatgcagaatcaactatataagttatgatatcaaattccttcatataagatgagtgtcac 265  Q
    |||| ||||||| |||||||||||| ||||| ||||||| ||||| | ||| ||||||||| ||||||| |||||||||    
T  31267423 aagagaacacaacatgtattatgcataatcatctatatatgttatcacatcgaattccttcgtataagacgagtgtcac 31267501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 116 - 189
Target Start/End: Original strand, 3924964 - 3925037
Alignment:
Q  116 attaggtaatgtctttattttgttggagtttaaattaaattcttgttagtttactaaagatgttggtattaaag 189  Q
    |||| ||| |||||||||||||||||| ||||| || ||||||| ||||||  || ||||||||||||||||||    
T  3924964 attatgtattgtctttattttgttggaatttaagtttaattcttattagttcgctgaagatgttggtattaaag 3925037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 116 - 189
Target Start/End: Complemental strand, 27317807 - 27317734
Alignment:
Q  116 attaggtaatgtctttattttgttggagtttaaattaaattcttgttagtttactaaagatgttggtattaaag 189  Q
    |||| ||| |||||||||||||||||| |||||||| || |||||||||||| |  || |||||||||||||||    
T  27317807 attatgtagtgtctttattttgttggaatttaaatttaaatcttgttagtttgcggaatatgttggtattaaag 27317734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 293 - 372
Target Start/End: Original strand, 3925280 - 3925356
Alignment:
Q  293 actcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    |||| ||||||||||| ||||| ||||||| |||||||||||||||||| ||||||||||    ||||||||||||||||    
T  3925280 actcttcttatatgagcgaattcgatgtga-aacatatatagttgatttggtagaataca--aattgtgttctcttcatt 3925356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 185 - 265
Target Start/End: Original strand, 28066601 - 28066681
Alignment:
Q  185 taaagacaacacaaaatgtattatgcagaatcaactatataagttatgatatcaaattccttcatataagatgagtgtcac 265  Q
    |||||| ||||||| ||||||| |||| ||||||||||||| ||| | | ||  |||||||||||||| ||||||||||||    
T  28066601 taaagagaacacaacatgtattctgcaaaatcaactatataggttttcacattgaattccttcatataggatgagtgtcac 28066681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 293 - 368
Target Start/End: Complemental strand, 28066676 - 28066603
Alignment:
Q  293 actcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctctt 368  Q
    ||||||| ||||||| ||||||  |||||| ||| |||||||||||||||| ||||||||  ||||||||||||||    
T  28066676 actcatcctatatgaaggaattcaatgtgaaaacctatatagttgattttgcagaataca--tgttgtgttctctt 28066603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 293 - 372
Target Start/End: Original strand, 41935144 - 41935221
Alignment:
Q  293 actcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    ||||||||||||  |||||||| ||||||| |||||||||||||||||| || |||||||   | |||||||||||||||    
T  41935144 actcatcttatacaagggaattcgatgtgaaaacatatatagttgatttggttgaataca--agatgtgttctcttcatt 41935221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 193 - 232
Target Start/End: Complemental strand, 3380479 - 3380440
Alignment:
Q  193 acacaaaatgtattatgcagaatcaactatataagttatg 232  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  3380479 acacaacatgtattatgcagaatcaactatataagttatg 3380440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 293 - 352
Target Start/End: Original strand, 29656278 - 29656337
Alignment:
Q  293 actcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaataca 352  Q
    ||||||||||||||| |||||| ||||||| ||| |||||||||||||  ||||||||||    
T  29656278 actcatcttatatgaaggaattcgatgtgagaacctatatagttgattaggtagaataca 29656337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 89
Target Start/End: Original strand, 150315 - 150388
Alignment:
Q  22 aactacaacaattgtcttacctctgaa------taaggtcaaacctgttaaacaacagctctcaagcattcacc 89  Q
    |||||||||||||| ||||||||| ||      |||||||||||||||||||||||| |||||| |||||||||    
T  150315 aactacaacaattggcttacctctaaaattggataaggtcaaacctgttaaacaacaactctcatgcattcacc 150388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 293 - 347
Target Start/End: Original strand, 5282126 - 5282180
Alignment:
Q  293 actcatcttatatgagggaatttgatgtgataacatatatagttgattttgtaga 347  Q
    |||||||||||| || |||||| ||||||||||| ||||||| ||||||||||||    
T  5282126 actcatcttatacgaaggaattcgatgtgataacctatatagctgattttgtaga 5282180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 135 - 185
Target Start/End: Complemental strand, 5282256 - 5282206
Alignment:
Q  135 ttgttggagtttaaattaaattcttgttagtttactaaagatgttggtatt 185  Q
    |||||||| |||||||||||| ||||||||||| || ||||||||||||||    
T  5282256 ttgttggaatttaaattaaatacttgttagtttgctgaagatgttggtatt 5282206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 293 - 355
Target Start/End: Original strand, 7414000 - 7414062
Alignment:
Q  293 actcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgt 355  Q
    ||||||| |||| || |||||||||||||||||| ||||||| | ||| ||||||||||||||    
T  7414000 actcatcatatacgaaggaatttgatgtgataacttatatagctaattctgtagaatacatgt 7414062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 116 - 189
Target Start/End: Original strand, 7066877 - 7066950
Alignment:
Q  116 attaggtaatgtctttattttgttggagtttaaattaaattcttgttagtttactaaagatgttggtattaaag 189  Q
    |||| ||| |||||||||||||||||| ||||| || ||||| ||  ||||| ||| |||||||||||||||||    
T  7066877 attatgtagtgtctttattttgttggaatttaagtttaattcatgaaagtttgctacagatgttggtattaaag 7066950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 200 - 265
Target Start/End: Complemental strand, 7414060 - 7413995
Alignment:
Q  200 atgtattatgcagaatcaactatataagttatgatatcaaattccttcatataagatgagtgtcac 265  Q
    ||||||| | |||||| | ||||||||||||| | ||||||||||||| |||| ||||||||||||    
T  7414060 atgtattctacagaattagctatataagttatcacatcaaattccttcgtatatgatgagtgtcac 7413995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 7414188 - 7414119
Alignment:
Q  116 attaggtaatgtctttattttgttggagtttaaattaaattcttgttagtttactaaagatgttggtatt 185  Q
    |||| ||| ||||||||||||||  || ||||| || ||||||||||||||| || ||||||||||||||    
T  7414188 attatgtagtgtctttattttgtgtgaatttaagtttaattcttgttagtttgctgaagatgttggtatt 7414119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 12083151 - 12083220
Alignment:
Q  116 attaggtaatgtctttattttgttggagtttaaattaaattcttgttagtttactaaagatgttggtatt 185  Q
    |||| ||| ||||||||||||||| || ||||| || |||||||||| |||| || ||||||||||||||    
T  12083151 attatgtagtgtctttattttgttcgaatttaagtttaattcttgtttgttttctgaagatgttggtatt 12083220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 48 - 89
Target Start/End: Original strand, 18149787 - 18149828
Alignment:
Q  48 ataaggtcaaacctgttaaacaacagctctcaagcattcacc 89  Q
    |||||||||| |||||||||||||| ||||||||||||||||    
T  18149787 ataaggtcaaccctgttaaacaacaactctcaagcattcacc 18149828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 384 - 437
Target Start/End: Original strand, 28009283 - 28009336
Alignment:
Q  384 caatattttcagtaaactttcaagaatttaatttaaatccagcatcatgatgat 437  Q
    |||||||||| | |||||| || |||||||||||||||||| ||||||||||||    
T  28009283 caatattttcggaaaacttccatgaatttaatttaaatccaacatcatgatgat 28009336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 293 - 368
Target Start/End: Original strand, 16886289 - 16886362
Alignment:
Q  293 actcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctctt 368  Q
    ||||||||||||  | |||||| ||||||| ||| |||||||||||||| ||| ||||||  ||||||||||||||    
T  16886289 actcatcttatacaaaggaattcgatgtgaaaacctatatagttgatttggtaaaataca--tgttgtgttctctt 16886362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 293 - 368
Target Start/End: Complemental strand, 31267496 - 31267423
Alignment:
Q  293 actcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctctt 368  Q
    |||| ||||||| || |||||| ||||||||||||||||||| ||||| || | ||||||  ||||||||||||||    
T  31267496 actcgtcttatacgaaggaattcgatgtgataacatatatagatgattatgcataataca--tgttgtgttctctt 31267423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 300 - 372
Target Start/End: Original strand, 7067225 - 7067299
Alignment:
Q  300 ttatatgagggaatttgatgtgataac--atatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    ||||||||||||||| || | | ||||  ||||||| || |||| | ||||||||||||||||||||||||||||    
T  7067225 ttatatgagggaattcgacgcggtaacctatatatattttatttggaagaatacatgtgttgtgttctcttcatt 7067299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 260
Target Start/End: Complemental strand, 23553986 - 23553939
Alignment:
Q  213 aatcaactatataagttatgatatcaaattccttcatataagatgagt 260  Q
    ||||||||||||| ||||| | |||||||||| |||||||||||||||    
T  23553986 aatcaactatataggttatcacatcaaattccctcatataagatgagt 23553939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 434
Target Start/End: Original strand, 12083758 - 12083804
Alignment:
Q  388 attttcagtaaactttcaagaatttaatttaaatccagcatcatgat 434  Q
    |||||| | ||||||||||||||| |||||||||||| |||||||||    
T  12083758 attttcggcaaactttcaagaattaaatttaaatccaacatcatgat 12083804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 214 - 260
Target Start/End: Original strand, 21614000 - 21614046
Alignment:
Q  214 atcaactatataagttatgatatcaaattccttcatataagatgagt 260  Q
    |||||||||||| ||||| | ||||||||||||||||||||| ||||    
T  21614000 atcaactatatatgttatcacatcaaattccttcatataagacgagt 21614046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 437
Target Start/End: Original strand, 3925436 - 3925485
Alignment:
Q  388 attttcagtaaactttcaagaatttaatttaaatccagcatcatgatgat 437  Q
    ||||| || |||||||||||||| |||||||||| || ||||||||||||    
T  3925436 attttgagcaaactttcaagaatataatttaaattcaacatcatgatgat 3925485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 266
Target Start/End: Complemental strand, 5282173 - 5282120
Alignment:
Q  213 aatcaactatataagttatgatatcaaattccttcatataagatgagtgtcaca 266  Q
    ||||| ||||||| ||||| | ||| ||||||||| ||||||||||||||||||    
T  5282173 aatcagctatataggttatcacatcgaattccttcgtataagatgagtgtcaca 5282120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 437
Target Start/End: Complemental strand, 7413626 - 7413577
Alignment:
Q  388 attttcagtaaactttcaagaatttaatttaaatccagcatcatgatgat 437  Q
    ||||||||||||||||||| |||| || ||||||||| | ||||||||||    
T  7413626 attttcagtaaactttcaacaattcaacttaaatccaacgtcatgatgat 7413577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 372
Target Start/End: Complemental strand, 7413725 - 7413688
Alignment:
Q  335 ttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    |||||| | |||||||||||||||||||||||||||||    
T  7413725 ttgattgtttagaatacatgtgttgtgttctcttcatt 7413688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 262
Target Start/End: Complemental strand, 16651179 - 16651130
Alignment:
Q  213 aatcaactatataagttatgatatcaaattccttcatataagatgagtgt 262  Q
    ||||||||||||||||| | | ||| ||||||||||||||||| ||||||    
T  16651179 aatcaactatataagttctcacatcgaattccttcatataagacgagtgt 16651130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 16886490 - 16886421
Alignment:
Q  116 attaggtaatgtctttattttgttggagtttaaattaaattcttgttagtttactaaagatgttggtatt 185  Q
    |||| ||| |||||||||||| || || |||||||| |||| |||| ||||| || ||||||||||||||    
T  16886490 attatgtactgtctttattttctttgaatttaaatttaattattgtcagtttgctgaagatgttggtatt 16886421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 262
Target Start/End: Complemental strand, 17625539 - 17625490
Alignment:
Q  213 aatcaactatataagttatgatatcaaattccttcatataagatgagtgt 262  Q
    ||||||||||||||||| | | ||| ||||||||||||||||| ||||||    
T  17625539 aatcaactatataagttctcacatcgaattccttcatataagacgagtgt 17625490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 336
Target Start/End: Complemental strand, 18776358 - 18776317
Alignment:
Q  295 tcatcttatatgagggaatttgatgtgataacatatatagtt 336  Q
    ||||||||||||| |||||||||||||| ||| |||||||||    
T  18776358 tcatcttatatgaaggaatttgatgtgagaacttatatagtt 18776317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 258
Target Start/End: Original strand, 18776317 - 18776358
Alignment:
Q  217 aactatataagttatgatatcaaattccttcatataagatga 258  Q
    ||||||||||||| | | ||||||||||||||||||||||||    
T  18776317 aactatataagttctcacatcaaattccttcatataagatga 18776358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 262
Target Start/End: Complemental strand, 29656325 - 29656276
Alignment:
Q  213 aatcaactatataagttatgatatcaaattccttcatataagatgagtgt 262  Q
    ||||||||||||| ||| | | ||| ||||||||||||||||||||||||    
T  29656325 aatcaactatataggttctcacatcgaattccttcatataagatgagtgt 29656276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 31267296 - 31267365
Alignment:
Q  116 attaggtaatgtctttattttgttggagtttaaattaaattcttgttagtttactaaagatgttggtatt 185  Q
    |||| ||| |||||||||||||| ||| ||||| || |||||||| |||||| || |||||| |||||||    
T  31267296 attatgtagtgtctttattttgtgggaatttaagtttaattcttgatagtttgctgaagatgatggtatt 31267365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 200 - 260
Target Start/End: Original strand, 5281795 - 5281855
Alignment:
Q  200 atgtattatgcagaatcaactatataagttatgatatcaaattccttcatataagatgagt 260  Q
    ||||||| | || ||||||||||||| ||||| | ||| ||||||||||||||| ||||||    
T  5281795 atgtattctacaaaatcaactatatatgttatcacatcgaattccttcatataaaatgagt 5281855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 372
Target Start/End: Complemental strand, 7067054 - 7067001
Alignment:
Q  317 atgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    |||||| |||||||||||||||||| ||| ||||||   |||||||||||||||||    
T  7067054 atgtgaaaacatatatagttgatttggtaaaataca--agttgtgttctcttcatt 7067001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 293 - 368
Target Start/End: Complemental strand, 11825117 - 11825044
Alignment:
Q  293 actcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctctt 368  Q
    ||||||||||||||| | |||| ||| | ||||| ||||||||||||| || | ||||||  ||||||||||||||    
T  11825117 actcatcttatatgaagaaattcgatatcataacttatatagttgattctgcataataca--tgttgtgttctctt 11825044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 54
Target Start/End: Original strand, 15337571 - 15337603
Alignment:
Q  22 aactacaacaattgtcttacctctgaataaggt 54  Q
    |||||||||||||||||||||||||||| ||||    
T  15337571 aactacaacaattgtcttacctctgaatgaggt 15337603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 293 - 341
Target Start/End: Original strand, 16651132 - 16651180
Alignment:
Q  293 actcatcttatatgagggaatttgatgtgataacatatatagttgattt 341  Q
    |||| |||||||||| |||||| ||||||| ||| ||||||||||||||    
T  16651132 actcgtcttatatgaaggaattcgatgtgagaacttatatagttgattt 16651180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 372
Target Start/End: Complemental strand, 16886146 - 16886098
Alignment:
Q  324 aacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    |||||||| |||||||||  || |||||||||||||||||| |||||||    
T  16886146 aacatataaagttgatttaataaaatacatgtgttgtgttcccttcatt 16886098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 293 - 341
Target Start/End: Original strand, 17625492 - 17625540
Alignment:
Q  293 actcatcttatatgagggaatttgatgtgataacatatatagttgattt 341  Q
    |||| |||||||||| |||||| ||||||| ||| ||||||||||||||    
T  17625492 actcgtcttatatgaaggaattcgatgtgagaacttatatagttgattt 17625540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 296 - 352
Target Start/End: Complemental strand, 36338092 - 36338036
Alignment:
Q  296 catcttatatgagggaatttgatgtgataacatatatagttgattttgtagaataca 352  Q
    |||||||||||||||||||  |||||| ||| |||||||||| ||| || |||||||    
T  36338092 catcttatatgagggaattcaatgtgagaacctatatagttggtttggttgaataca 36338036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 2e-19; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 297 - 370
Target Start/End: Complemental strand, 24629573 - 24629500
Alignment:
Q  297 atcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttca 370  Q
    ||||||||||||||||||  |||||| || ||||||||||||||| |||||||||| |||||||||||||||||    
T  24629573 atcttatatgagggaattccatgtgaaaatatatatagttgatttggtagaatacaagtgttgtgttctcttca 24629500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 293 - 372
Target Start/End: Complemental strand, 12504511 - 12504432
Alignment:
Q  293 actcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    ||||||| ||| ||| |||||| ||||||| ||| ||||||||||||||  |||||||||||||||||||||||||||||    
T  12504511 actcatcctatgtgaaggaattcgatgtgaaaacttatatagttgatttaatagaatacatgtgttgtgttctcttcatt 12504432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 286 - 372
Target Start/End: Complemental strand, 22842971 - 22842885
Alignment:
Q  286 tgtgatgactcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    |||||||||||||||||||||| || ||| ||||||| ||| |||||||||||||| ||||||||||  ||| |||||| |||||||    
T  22842971 tgtgatgactcatcttatatgaagggattcgatgtgagaacttatatagttgatttggtagaatacaattgtcgtgttcacttcatt 22842885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 22 - 115
Target Start/End: Complemental strand, 31171795 - 31171697
Alignment:
Q  22 aactacaacaattgtcttacctctgaa-taaggt----caaacctgttaaacaacagctctcaagcattcaccttgaagttttattgttcctttcaaaa 115  Q
    ||||||||||||||||||||||||||| | || |    ||||| ||||||||||||| |||||||||||||||  |||||| |||||||||||||||||    
T  31171795 aactacaacaattgtcttacctctgaaatgagataattcaaacttgttaaacaacagttctcaagcattcacccggaagttctattgttcctttcaaaa 31171697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 281 - 372
Target Start/End: Original strand, 10205123 - 10205214
Alignment:
Q  281 ctttatgtgatgactcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    |||| ||||||| ||| || ||||||| |  ||| ||||||| |||||||||||||||||| |||||||||  |||||||||||||||||||    
T  10205123 ctttctgtgatggctcgtcctatatgaagagattcgatgtgaaaacatatatagttgatttggtagaatactagtgttgtgttctcttcatt 10205214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 293 - 372
Target Start/End: Complemental strand, 12784830 - 12784751
Alignment:
Q  293 actcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    ||||||||||||||| |||||| ||||||| ||||| ||||  ||| || |||||||||||||||  |||||||||||||    
T  12784830 actcatcttatatgaaggaattcgatgtgagaacatgtataactgacttggtagaatacatgtgtcatgttctcttcatt 12784751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 290 - 372
Target Start/End: Original strand, 32123826 - 32123908
Alignment:
Q  290 atgactcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    |||| ||||| | ||||| || ||| ||||||||||| |||||||||||||| ||| ||||||  ||||||||||||||||||    
T  32123826 atgaatcatcctgtatgaagggattcgatgtgataacctatatagttgatttggtataatacaattgttgtgttctcttcatt 32123908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 27783668 - 27783737
Alignment:
Q  116 attaggtaatgtctttattttgttggagtttaaattaaattcttgttagtttactaaagatgttggtatt 185  Q
    |||| ||| |||||||||||||||||| ||||| || ||||||||||||||| |  ||||||||||||||    
T  27783668 attatgtagtgtctttattttgttggaatttaagttcaattcttgttagtttgcggaagatgttggtatt 27783737  T

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Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 293 - 372
Target Start/End: Original strand, 12784966 - 12785043
Alignment:
Q  293 actcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    |||||||||||| || | |||||||||||| ||| |||||||||||||  ||||||||||  |||||| |||||||||||    
T  12784966 actcatcttatacgaagaaatttgatgtgaaaacgtatatagttgattcggtagaataca--tgttgtattctcttcatt 12785043  T

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Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 320 - 372
Target Start/End: Original strand, 26140733 - 26140785
Alignment:
Q  320 tgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    ||||||| |||||  ||||||| ||||||||||||||||||||||||||||||    
T  26140733 tgataacctatattcttgatttggtagaatacatgtgttgtgttctcttcatt 26140785  T

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Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 296 - 352
Target Start/End: Complemental strand, 32108540 - 32108484
Alignment:
Q  296 catcttatatgagggaatttgatgtgataacatatatagttgattttgtagaataca 352  Q
    ||||||||||||||||||| |||| || |||||||||||||||||| ||| ||||||    
T  32108540 catcttatatgagggaattcgatgagagaacatatatagttgatttagtataataca 32108484  T

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Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 388 - 437
Target Start/End: Original strand, 10205278 - 10205327
Alignment:
Q  388 attttcagtaaactttcaagaatttaatttaaatccagcatcatgatgat 437  Q
    ||||| || |||||||||||||||||||||||| ||| ||||||||||||    
T  10205278 attttgagcaaactttcaagaatttaatttaaacccaacatcatgatgat 10205327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 125 - 181
Target Start/End: Original strand, 10204802 - 10204858
Alignment:
Q  125 tgtctttattttgttggagtttaaattaaattcttgttagtttactaaagatgttgg 181  Q
    |||||||||||||||||| ||||| || |||||| |||||||| || ||||||||||    
T  10204802 tgtctttattttgttggaatttaagtttaattctagttagtttgctgaagatgttgg 10204858  T

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Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 397 - 437
Target Start/End: Complemental strand, 29370393 - 29370353
Alignment:
Q  397 aaactttcaagaatttaatttaaatccagcatcatgatgat 437  Q
    |||||||||||||||||||||| ||||| ||||||||||||    
T  29370393 aaactttcaagaatttaatttatatccaacatcatgatgat 29370353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 167
Target Start/End: Complemental strand, 12504741 - 12504690
Alignment:
Q  116 attaggtaatgtctttattttgttggagtttaaattaaattcttgttagttt 167  Q
    |||| ||| |||||||||||||||||| ||||| || |||||||||||||||    
T  12504741 attatgtagtgtctttattttgttggaatttaagtttaattcttgttagttt 12504690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 437
Target Start/End: Original strand, 26140847 - 26140898
Alignment:
Q  386 atattttcagtaaactttcaagaatttaatttaaatccagcatcatgatgat 437  Q
    |||||||| | |||||||||||||| ||||||||| ||| ||||||||||||    
T  26140847 atattttcggcaaactttcaagaatataatttaaacccaacatcatgatgat 26140898  T

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Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 293 - 352
Target Start/End: Original strand, 29370555 - 29370614
Alignment:
Q  293 actcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaataca 352  Q
    |||||||||||| || | |||| ||||||| ||| |||||||||||||| ||||||||||    
T  29370555 actcatcttatacgaagcaattcgatgtgaaaacctatatagttgatttggtagaataca 29370614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 50 - 120
Target Start/End: Original strand, 3009560 - 3009630
Alignment:
Q  50 aaggtcaaacctgttaaacaacagctctcaagcattcaccttgaagttttattgttcctttcaaaaattag 120  Q
    ||||||||||||||||||||||| || || || |||||||  |||||| | ||||| ||||| ||||||||    
T  3009560 aaggtcaaacctgttaaacaacaactatctagtattcacccggaagttctgttgtttctttcgaaaattag 3009630  T

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Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 3589206 - 3589145
Alignment:
Q  54 tcaaacctgttaaacaacagctctcaagcattcaccttgaagttttattgttcctttcaaaa 115  Q
    |||||| || |||||||||| |||||||||||||||  ||| || | |||||||||||||||    
T  3589206 tcaaacttgctaaacaacagttctcaagcattcacccggaaattctgttgttcctttcaaaa 3589145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 437
Target Start/End: Complemental strand, 24629434 - 24629385
Alignment:
Q  388 attttcagtaaactttcaagaatttaatttaaatccagcatcatgatgat 437  Q
    ||||| || |||||||||||||| ||||||||| ||||| ||||||||||    
T  24629434 attttgagcaaactttcaagaatataatttaaacccagcgtcatgatgat 24629385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 181
Target Start/End: Original strand, 26140372 - 26140437
Alignment:
Q  116 attaggtaatgtctttattttgttggagtttaaattaaattcttgttagtttactaaagatgttgg 181  Q
    |||| ||| ||| |||||||||||||| ||||  || |||||||||||||||||| || |||||||    
T  26140372 attatgtattgtatttattttgttggaatttatgtttaattcttgttagtttactgaatatgttgg 26140437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 437
Target Start/End: Original strand, 27784142 - 27784191
Alignment:
Q  388 attttcagtaaactttcaagaatttaatttaaatccagcatcatgatgat 437  Q
    |||||| | |||||||||| |||||||||||||||||  |||||||||||    
T  27784142 attttccgcaaactttcaacaatttaatttaaatccaatatcatgatgat 27784191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 293 - 372
Target Start/End: Complemental strand, 22306 - 22227
Alignment:
Q  293 actcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    ||||||||||||||| |||||| ||||||| ||||| || ||| ||||| ||||||||||||||||| ||||||||||||    
T  22306 actcatcttatatgaaggaattcgatgtgagaacatgtagagtagatttggtagaatacatgtgttgcgttctcttcatt 22227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 187 - 262
Target Start/End: Complemental strand, 22516 - 22441
Alignment:
Q  187 aagacaacacaaaatgtattatgcagaatcaactatataagttatgatatcaaattccttcatataagatgagtgt 262  Q
    |||| ||||||| ||||||||||  |||||||||||||||||| | | ||| ||||||||| ||||||||||||||    
T  22516 aagagaacacaacatgtattatgtcgaatcaactatataagttctcacatcgaattccttcgtataagatgagtgt 22441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 293 - 372
Target Start/End: Complemental strand, 37089 - 37012
Alignment:
Q  293 actcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    ||||||| ||||| | |||||| ||||||| |||||||||||||||||| ||| ||||||  ||||||||||||||||||    
T  37089 actcatcctatataaaggaattcgatgtgaaaacatatatagttgatttggtaaaataca--tgttgtgttctcttcatt 37012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 187 - 372
Target Start/End: Original strand, 37016 - 37207
Alignment:
Q  187 aagacaacacaaaatgtattatgcagaatcaactatataagttatgatatcaaattccttcatataagatgagtg-----tcacagaatgcacctcattc 281  Q
    |||| ||||||| ||||||| | |  ||||||||||||| ||| | | ||| |||||||| ||||| ||||||||     | | ||||||||||||||||    
T  37016 aagagaacacaacatgtattttaccaaatcaactatatatgttttcacatcgaattcctttatataggatgagtggggcgtaagagaatgcacctcattc 37115  T
Q  282 ttt-atgtgatgactcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    ||| | ||    || |||| ||||||| || ||| ||||||| ||| | ||||||||||||  ||||| |||||||||||||||||||||||    
T  37116 ttttacgtccatacccatcctatatgaagggattcgatgtgagaacttttatagttgatttgctagaacacatgtgttgtgttctcttcatt 37207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 295 - 352
Target Start/End: Complemental strand, 46051 - 45994
Alignment:
Q  295 tcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaataca 352  Q
    ||||||||||||| |||||| ||||||| ||||| | |||||||||||||||||||||    
T  46051 tcatcttatatgaaggaattcgatgtgagaacatgtgtagttgattttgtagaataca 45994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 293 - 343
Target Start/End: Original strand, 5908 - 5958
Alignment:
Q  293 actcatcttatatgagggaatttgatgtgataacatatatagttgattttg 343  Q
    |||||| ||||||||||||||| ||||| ||||  ||||||||||||||||    
T  5908 actcattttatatgagggaattcgatgtcataatttatatagttgattttg 5958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 293 - 372
Target Start/End: Complemental strand, 5770 - 5693
Alignment:
Q  293 actcatcttatatgagggaatttgatgtgataacatatatagttgattttgtagaatacatgtgttgtgttctcttcatt 372  Q
    ||||||||||||  ||| |||| ||||||| ||  |||||||||||||||| | ||||||  ||||||| ||||||||||    
T  5770 actcatcttatacaaggtaattcgatgtgagaatttatatagttgattttgcaaaataca--tgttgtgctctcttcatt 5693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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