View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1773_high_93 (Length: 342)

Name: NF1773_high_93
Description: NF1773
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1773_high_93
NF1773_high_93
[»] chr4 (20 HSPs)
chr4 (153-342)||(9646493-9646682)
chr4 (1-110)||(9646352-9646464)
chr4 (1-63)||(34835528-34835590)
chr4 (4-63)||(40252297-40252356)
chr4 (1-63)||(41085025-41085087)
chr4 (5-63)||(42245745-42245803)
chr4 (1-63)||(41621732-41621794)
chr4 (16-63)||(20566348-20566395)
chr4 (16-63)||(25852213-25852260)
chr4 (16-63)||(32986196-32986243)
chr4 (16-63)||(40059003-40059050)
chr4 (16-63)||(46714391-46714438)
chr4 (16-63)||(51535612-51535659)
chr4 (16-63)||(54127493-54127540)
chr4 (21-55)||(17415688-17415722)
chr4 (18-63)||(5609355-5609400)
chr4 (6-63)||(21487091-21487148)
chr4 (16-65)||(34722167-34722216)
chr4 (8-48)||(7093390-7093430)
chr4 (24-64)||(32942368-32942408)
[»] chr8 (23 HSPs)
chr8 (4-63)||(34639345-34639404)
chr8 (6-63)||(34694717-34694774)
chr8 (4-60)||(41070767-41070823)
chr8 (16-65)||(24018383-24018432)
chr8 (24-63)||(32879282-32879321)
chr8 (16-63)||(42643269-42643316)
chr8 (16-65)||(28193475-28193524)
chr8 (16-63)||(2618189-2618236)
chr8 (16-63)||(3734774-3734821)
chr8 (16-63)||(4718648-4718695)
chr8 (16-63)||(18532110-18532157)
chr8 (16-63)||(19471612-19471659)
chr8 (16-63)||(19542536-19542583)
chr8 (16-63)||(19590113-19590160)
chr8 (16-63)||(20305911-20305958)
chr8 (16-63)||(21092544-21092591)
chr8 (4-63)||(26168987-26169046)
chr8 (16-63)||(34237806-34237853)
chr8 (4-63)||(39317023-39317082)
chr8 (1-63)||(28964036-28964098)
chr8 (4-57)||(15974915-15974967)
chr8 (6-46)||(18128533-18128573)
chr8 (1-65)||(30911393-30911457)
[»] chr2 (11 HSPs)
chr2 (4-63)||(8192490-8192549)
chr2 (16-63)||(11941361-11941408)
chr2 (16-63)||(25293165-25293212)
chr2 (16-63)||(44946204-44946251)
chr2 (1-63)||(40997486-40997548)
chr2 (4-63)||(20297562-20297622)
chr2 (8-63)||(6007032-6007087)
chr2 (16-63)||(15037958-15038005)
chr2 (16-63)||(18976576-18976623)
chr2 (4-50)||(19605984-19606030)
chr2 (4-49)||(18708490-18708535)
[»] chr1 (21 HSPs)
chr1 (4-63)||(24216977-24217036)
chr1 (4-63)||(52135129-52135188)
chr1 (5-63)||(9926288-9926346)
chr1 (16-63)||(2272343-2272390)
chr1 (16-63)||(27455017-27455064)
chr1 (4-63)||(32729544-32729603)
chr1 (16-63)||(46607809-46607856)
chr1 (22-64)||(1095152-1095194)
chr1 (1-63)||(1378744-1378806)
chr1 (6-63)||(1138578-1138635)
chr1 (4-44)||(19480552-19480592)
chr1 (16-63)||(4621388-4621435)
chr1 (16-63)||(7197397-7197444)
chr1 (16-63)||(8077646-8077693)
chr1 (16-63)||(24674392-24674439)
chr1 (16-63)||(34778341-34778388)
chr1 (16-63)||(37349522-37349569)
chr1 (1-63)||(26608181-26608242)
chr1 (32-65)||(8879260-8879293)
chr1 (19-63)||(16899510-16899554)
chr1 (4-44)||(39714789-39714829)
[»] chr5 (25 HSPs)
chr5 (5-63)||(19145551-19145609)
chr5 (16-63)||(5067300-5067347)
chr5 (16-63)||(22253296-22253343)
chr5 (16-63)||(25750762-25750809)
chr5 (16-65)||(37397710-37397759)
chr5 (16-63)||(4603776-4603823)
chr5 (16-63)||(8484812-8484859)
chr5 (4-63)||(8780477-8780536)
chr5 (16-63)||(13108600-13108647)
chr5 (4-63)||(21042664-21042723)
chr5 (16-63)||(22392700-22392747)
chr5 (4-63)||(25343238-25343297)
chr5 (16-63)||(25586931-25586978)
chr5 (16-63)||(32059591-32059638)
chr5 (4-63)||(33025479-33025538)
chr5 (16-63)||(36954817-36954864)
chr5 (16-63)||(38631112-38631159)
chr5 (1-63)||(31288082-31288144)
chr5 (4-65)||(2499317-2499378)
chr5 (18-63)||(23270675-23270720)
chr5 (16-61)||(38684209-38684254)
chr5 (18-62)||(204177-204221)
chr5 (19-63)||(10399772-10399816)
chr5 (19-51)||(14302853-14302885)
chr5 (4-63)||(15485430-15485490)
[»] chr7 (28 HSPs)
chr7 (4-65)||(28646970-28647031)
chr7 (16-63)||(8435846-8435893)
chr7 (4-59)||(22696327-22696382)
chr7 (5-63)||(3951130-3951189)
chr7 (16-63)||(10091191-10091238)
chr7 (4-63)||(12211674-12211733)
chr7 (4-63)||(23330878-23330937)
chr7 (18-63)||(22638295-22638340)
chr7 (16-65)||(27312153-27312202)
chr7 (18-63)||(31197594-31197639)
chr7 (7-63)||(21574245-21574301)
chr7 (16-63)||(2103058-2103105)
chr7 (16-63)||(2344302-2344349)
chr7 (16-63)||(2751274-2751321)
chr7 (1-63)||(3950924-3950987)
chr7 (16-63)||(7176013-7176060)
chr7 (16-63)||(7275280-7275327)
chr7 (16-63)||(13332574-13332621)
chr7 (16-63)||(18044110-18044157)
chr7 (16-63)||(21217984-21218031)
chr7 (16-63)||(22119891-22119938)
chr7 (16-63)||(23854399-23854446)
chr7 (16-63)||(28003839-28003886)
chr7 (16-63)||(32849594-32849641)
chr7 (16-63)||(40543061-40543108)
chr7 (6-63)||(577682-577739)
chr7 (8-65)||(37056215-37056272)
chr7 (11-63)||(9769589-9769641)
[»] chr6 (17 HSPs)
chr6 (16-63)||(8479311-8479358)
chr6 (6-59)||(17420868-17420921)
chr6 (4-63)||(9208251-9208310)
chr6 (16-63)||(9843937-9843984)
chr6 (4-63)||(33499473-33499532)
chr6 (16-63)||(9238974-9239021)
chr6 (4-63)||(10377714-10377773)
chr6 (16-63)||(11007164-11007211)
chr6 (16-63)||(12591636-12591683)
chr6 (16-63)||(15360249-15360296)
chr6 (16-63)||(22576066-22576113)
chr6 (1-44)||(28028555-28028598)
chr6 (16-63)||(28672066-28672113)
chr6 (16-62)||(11448871-11448917)
chr6 (4-45)||(28741980-28742021)
chr6 (18-63)||(34147345-34147390)
chr6 (18-63)||(34159961-34160006)
[»] chr3 (25 HSPs)
chr3 (4-63)||(4252535-4252594)
chr3 (16-63)||(21362942-21362989)
chr3 (16-63)||(25289865-25289912)
chr3 (16-63)||(25344208-25344255)
chr3 (16-63)||(40940824-40940871)
chr3 (16-63)||(48977387-48977434)
chr3 (16-63)||(7485676-7485723)
chr3 (16-63)||(8456301-8456348)
chr3 (16-63)||(25379760-25379807)
chr3 (16-63)||(30257623-30257670)
chr3 (16-63)||(30807304-30807351)
chr3 (16-63)||(34492726-34492773)
chr3 (16-63)||(35492910-35492957)
chr3 (16-63)||(45529905-45529952)
chr3 (16-63)||(46576347-46576394)
chr3 (16-63)||(52821786-52821833)
chr3 (16-63)||(53424327-53424374)
chr3 (29-63)||(24703703-24703737)
chr3 (16-58)||(32151428-32151470)
chr3 (4-50)||(50731372-50731418)
chr3 (4-50)||(50781436-50781482)
chr3 (18-63)||(18177040-18177085)
chr3 (6-43)||(42430360-42430397)
chr3 (4-48)||(50162057-50162101)
chr3 (1-65)||(55371421-55371485)
[»] scaffold0068 (1 HSPs)
scaffold0068 (16-63)||(41795-41842)
[»] scaffold0028 (1 HSPs)
scaffold0028 (5-63)||(27775-27833)
[»] scaffold0623 (1 HSPs)
scaffold0623 (16-63)||(1207-1254)
[»] scaffold0576 (1 HSPs)
scaffold0576 (16-63)||(5233-5280)
[»] scaffold0459 (1 HSPs)
scaffold0459 (16-63)||(10844-10891)
[»] scaffold0366 (2 HSPs)
scaffold0366 (16-63)||(9450-9497)
scaffold0366 (16-63)||(12151-12198)
[»] scaffold0199 (1 HSPs)
scaffold0199 (16-63)||(8558-8605)
[»] scaffold0049 (1 HSPs)
scaffold0049 (16-63)||(66761-66808)
[»] scaffold0240 (1 HSPs)
scaffold0240 (24-65)||(12913-12954)
[»] scaffold0217 (1 HSPs)
scaffold0217 (16-65)||(7460-7509)


Alignment Details
Target: chr4 (Bit Score: 174; Significance: 1e-93; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 153 - 342
Target Start/End: Original strand, 9646493 - 9646682
Alignment:
Q  153 accatggtatttctttttatacttgaagcaaatcatatttggtttcttgtgatgaagaaatatagatataaactttttgaaagagaaacaaataaaatgg 252  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  9646493 accatggtatttctgtttatacttgaagcaaatcatatttggtttcttgtgatgaagaaatatagatataaactttttgaaagagaaacgaataaaatgg 9646592  T
Q  253 tagacataacatttggtcagtttgtaagagtgttagtggatatgaatgttactcaaatcttgagacacaaggttttggtgaaaaggaaag 342  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  9646593 tagacataacatttggtcagtttgtaagagtgttagtggatatgaatgttactcaaatcttgagatacaaggttttggtggaaaggaaag 9646682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 9646352 - 9646464
Alignment:
Q  1 acatgagaccttgacaggagcacactcaaagatcccaagtcaaccactagaccaaccccaaata---gnnnnnnnnaaataacatttttatggaaattca 97  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||            ||||||||||||||||||||||||    
T  9646352 acatgagaccttgacaggagcacactcaaagatcccaaaccaaccactagaccaaccccaaataatttttttttttaaataacatttttatggaaattca 9646451  T
Q  98 aatacgacatatt 110  Q
    |||||||||||||    
T  9646452 aatacgacatatt 9646464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 34835590 - 34835528
Alignment:
Q  1 acatgagaccttgacaggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    |||||||||||| | ||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  34835590 acatgagaccttaagaggagcaaactctaagatcccaagccaaccactagaccaaccccaaat 34835528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 40252356 - 40252297
Alignment:
Q  4 tgagaccttgacaggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||||||| || ||||||||| ||||| |||||||||| ||||||||||||||||||    
T  40252356 tgagaccttgagagaagcacactccaagattccaagtcaactactagaccaaccccaaat 40252297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 41085087 - 41085025
Alignment:
Q  1 acatgagaccttgacaggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    |||| ||||||||| ||||| |||||| |||||| |||||||||||||||| |||||||||||    
T  41085087 acattagaccttgaaaggaggacactccaagatctcaagtcaaccactagatcaaccccaaat 41085025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 42245803 - 42245745
Alignment:
Q  5 gagaccttgacaggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    |||||||| | ||||||| |||| |||||||||||||||||||||| ||||||||||||    
T  42245803 gagacctttagaggagcaaactctaagatcccaagtcaaccactaggccaaccccaaat 42245745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 41621732 - 41621794
Alignment:
Q  1 acatgagaccttgacaggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    |||||||||||||| ||||||| |||| |||||| |||| |||||| ||| ||||||||||||    
T  41621732 acatgagaccttgagaggagcaaactccaagatctcaagccaaccattaggccaaccccaaat 41621794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 20566395 - 20566348
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  20566395 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 20566348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 25852260 - 25852213
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  25852260 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 25852213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 32986243 - 32986196
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  32986243 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 32986196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 40059003 - 40059050
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  40059003 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 40059050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 46714438 - 46714391
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  46714438 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 46714391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 51535659 - 51535612
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| |||||||||||||||||||||| ||||||| ||||    
T  51535659 aggagcaaactccaagatcccaagtcaaccactaggccaaccctaaat 51535612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 54127493 - 54127540
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  54127493 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 54127540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 55
Target Start/End: Complemental strand, 17415722 - 17415688
Alignment:
Q  21 cacactcaaagatcccaagtcaaccactagaccaa 55  Q
    ||||||| |||||||||||||||||||||||||||    
T  17415722 cacactccaagatcccaagtcaaccactagaccaa 17415688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 5609355 - 5609400
Alignment:
Q  18 gagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  5609355 gagcaaactccaagatcccaagccaaccactaggccaaccccaaat 5609400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 21487091 - 21487148
Alignment:
Q  6 agaccttgacaggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||||| |||||||||||| ||||||| ||| ||| || |||||||| |||||||    
T  21487091 agaccttgagaggagcacactctaagatcctaagccaatcaatagaccaaacccaaat 21487148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 34722216 - 34722167
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaatag 65  Q
    ||||||| |||| ||||||||||| |||||||||  ||||||||||||||    
T  34722216 aggagcaaactccaagatcccaagccaaccactaagccaaccccaaatag 34722167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 48
Target Start/End: Complemental strand, 7093430 - 7093390
Alignment:
Q  8 accttgacaggagcacactcaaagatcccaagtcaaccact 48  Q
    ||||||| |||||||||||| ||||||||||| ||||||||    
T  7093430 accttgaaaggagcacactccaagatcccaagccaaccact 7093390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 32942408 - 32942368
Alignment:
Q  24 actcaaagatcccaagtcaaccactagaccaaccccaaata 64  Q
    |||| |||||| |||| ||||||||||||||||||||||||    
T  32942408 actccaagatctcaagccaaccactagaccaaccccaaata 32942368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 5e-16; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 34639345 - 34639404
Alignment:
Q  4 tgagaccttgacaggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||||||| |||||||||||| ||||||||||| |||||||||||| ||||||||||    
T  34639345 tgagaccttgagaggagcacactccaagatcccaagccaaccactagactaaccccaaat 34639404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 34694717 - 34694774
Alignment:
Q  6 agaccttgacaggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||||| ||||||| |||| |||||| ||||||||||||||||||||||||||||    
T  34694717 agaccttgagaggagcaaactccaagatcacaagtcaaccactagaccaaccccaaat 34694774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 41070823 - 41070767
Alignment:
Q  4 tgagaccttgacaggagcacactcaaagatcccaagtcaaccactagaccaacccca 60  Q
    ||||||||||| || ||||||||| |||||||||||||||||||||| |||||||||    
T  41070823 tgagaccttgagagtagcacactccaagatcccaagtcaaccactaggccaacccca 41070767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 24018432 - 24018383
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaatag 65  Q
    ||||||| |||| ||||||||||||||||||||||| |||||||||||||    
T  24018432 aggagcaaactccaagatcccaagtcaaccactagatcaaccccaaatag 24018383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 63
Target Start/End: Complemental strand, 32879321 - 32879282
Alignment:
Q  24 actcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  32879321 actcgaagatcccaagtcaaccactagaccaaccccaaat 32879282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 42643269 - 42643316
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| |||||||||||||||||||||| ||||||||||||    
T  42643269 aggagcaaactccaagatcccaagtcaaccactaggccaaccccaaat 42643316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 28193524 - 28193475
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaatag 65  Q
    ||||||| |||| ||||||||||| |||||||||| ||||||||||||||    
T  28193524 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaatag 28193475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 2618236 - 2618189
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  2618236 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 2618189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 3734774 - 3734821
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  3734774 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 3734821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 4718695 - 4718648
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  4718695 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 4718648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 18532157 - 18532110
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  18532157 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 18532110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 19471659 - 19471612
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  19471659 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 19471612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 19542583 - 19542536
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  19542583 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 19542536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 19590113 - 19590160
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  19590113 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 19590160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 20305958 - 20305911
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  20305958 aggagcaaactctaagatcccaagccaaccactaggccaaccccaaat 20305911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 21092591 - 21092544
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  21092591 aggagcaaactctaagatcccaagccaaccactaggccaaccccaaat 21092544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 26168987 - 26169046
Alignment:
Q  4 tgagaccttgacaggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||||||| ||||||| |||| |||||||||||  ||||||||| ||||||| ||||    
T  26168987 tgagaccttgagaggagcaaactccaagatcccaagcaaaccactaggccaaccctaaat 26169046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 34237806 - 34237853
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  34237806 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 34237853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 39317082 - 39317023
Alignment:
Q  4 tgagaccttgacaggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||| ||||| || ||||||||| || ||| |||||||||||||||||||||| |||||    
T  39317082 tgagagcttgagagaagcacactccaatatctcaagtcaaccactagaccaacctcaaat 39317023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 28964098 - 28964036
Alignment:
Q  1 acatgagaccttgacaggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    |||||| ||||| | ||||||| |||| |||||| |||  |||||||||||||||||||||||    
T  28964098 acatgaaaccttaagaggagcaaactctaagatctcaaaccaaccactagaccaaccccaaat 28964036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 15974967 - 15974915
Alignment:
Q  4 tgagaccttgacaggagcacactcaaagatcccaagtcaaccactagaccaacc 57  Q
    ||||||||||| ||||||| |||| |||||||||||| ||||||||| ||||||    
T  15974967 tgagaccttgagaggagcatactccaagatcccaagt-aaccactaggccaacc 15974915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 18128573 - 18128533
Alignment:
Q  6 agaccttgacaggagcacactcaaagatcccaagtcaacca 46  Q
    ||||||||| |||||||||||  ||||||||||||||||||    
T  18128573 agaccttgaaaggagcacacttcaagatcccaagtcaacca 18128533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 30911393 - 30911457
Alignment:
Q  1 acatgagaccttgacaggagcacactcaaagatcccaagtcaaccactagaccaaccccaaatag 65  Q
    |||||| ||||||| ||||||| |||| |||||| ||| |||| || ||| ||||||||||||||    
T  30911393 acatgaaaccttgagaggagcaaactccaagatctcaaatcaatcattaggccaaccccaaatag 30911457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 5e-16; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 8192490 - 8192549
Alignment:
Q  4 tgagaccttgacaggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||||||| |||||||||||| ||||||||||| |||||||||| ||||||||||||    
T  8192490 tgagaccttgagaggagcacactccaagatcccaagccaaccactaggccaaccccaaat 8192549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 11941361 - 11941408
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  11941361 aggagcaaactccaagatcccaagccaaccactagaccaaccccaaat 11941408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 25293212 - 25293165
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||||||||||||||||||||| |||||    
T  25293212 aggagcaaactccaagatcccaagtcaaccactagaccaacctcaaat 25293165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 44946204 - 44946251
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  44946204 aggagcaaactccaagatcccaagccaaccactagaccaaccccaaat 44946251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 40997486 - 40997548
Alignment:
Q  1 acatgagaccttgacaggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||||||||   ||||||| |||| ||||||||||||||||||||||||| ||| |||||    
T  40997486 acatgagacctttggaggagcaaactccaagatcccaagtcaaccactagacccacctcaaat 40997548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 20297622 - 20297562
Alignment:
Q  4 tgagaccttgacaggagcacactc-aaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||||||| ||||||||| || |||||||||||| |||||||| | ||||||||||||    
T  20297622 tgagaccttgagaggagcacattccaaagatcccaagccaaccactgggccaaccccaaat 20297562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 6007032 - 6007087
Alignment:
Q  8 accttgacaggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| || ||||||||| ||||| ||||||||||||| |||||||| ||||||    
T  6007032 accttgagagaagcacactccaagattccaagtcaaccaccagaccaactccaaat 6007087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 15038005 - 15037958
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| |||||||| ||||||||||||| ||||||||||||    
T  15038005 aggagcaaactccaagatcccgagtcaaccactaggccaaccccaaat 15037958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 18976576 - 18976623
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  18976576 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 18976623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 19605984 - 19606030
Alignment:
Q  4 tgagaccttgacaggagcacactcaaagatcccaagtcaaccactag 50  Q
    ||||||||||| |||||| ||||| ||||||||||| ||||||||||    
T  19605984 tgagaccttgagaggagcgcactccaagatcccaagccaaccactag 19606030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 18708535 - 18708490
Alignment:
Q  4 tgagaccttgacaggagcacactcaaagatcccaagtcaaccacta 49  Q
    ||||||||||| |||| ||||||| |||||||||| ||||||||||    
T  18708535 tgagaccttgagaggaacacactccaagatcccaattcaaccacta 18708490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 5e-16; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 24217036 - 24216977
Alignment:
Q  4 tgagaccttgacaggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||||  |||||||||||    
T  24217036 tgagaccttgagaggagcacactccaagatcccaagtcaaccactaggtcaaccccaaat 24216977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 52135188 - 52135129
Alignment:
Q  4 tgagaccttgacaggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    |||||| |||| | ||||| |||| |||||||||||||||||||||||||||||||||||    
T  52135188 tgagacattgagatgagcaaactccaagatcccaagtcaaccactagaccaaccccaaat 52135129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 9926288 - 9926346
Alignment:
Q  5 gagaccttgacaggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    |||||||||| |||||||||||| |||||||||||||||| ||||||||| | ||||||    
T  9926288 gagaccttgagaggagcacactccaagatcccaagtcaactactagaccagctccaaat 9926346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 2272390 - 2272343
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| |||||||||||||||||||||| ||||||||||||    
T  2272390 aggagcaaactctaagatcccaagtcaaccactaggccaaccccaaat 2272343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 27455017 - 27455064
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  27455017 aggagcaaactccaagatcccaagccaaccactagaccaaccccaaat 27455064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 32729603 - 32729544
Alignment:
Q  4 tgagaccttgacaggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    |||||| |||| ||||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  32729603 tgagactttgagaggagcaaactcgaagatcccaagccaaccactaggccaaccccaaat 32729544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 46607856 - 46607809
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| |||||||||||||||||||||| ||||||||||||    
T  46607856 aggagcaaactccaagatcccaagtcaaccactaggccaaccccaaat 46607809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 64
Target Start/End: Original strand, 1095152 - 1095194
Alignment:
Q  22 acactcaaagatcccaagtcaaccactagaccaaccccaaata 64  Q
    |||||| ||||||||||| ||||||||||||||||||||||||    
T  1095152 acactccaagatcccaagccaaccactagaccaaccccaaata 1095194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 1378806 - 1378744
Alignment:
Q  1 acatgagaccttgacaggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||||||||   ||||| | |||| ||||| |||||||||||||||||||||||||||||    
T  1378806 acatgagacctttggaggagtaaactccaagattccaagtcaaccactagaccaaccccaaat 1378744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 1138635 - 1138578
Alignment:
Q  6 agaccttgacaggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||||| |||||||||||| |||||| |||| ||||||||||  |||||||||||    
T  1138635 agaccttgagaggagcacactccaagatctcaagccaaccactaggtcaaccccaaat 1138578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 19480592 - 19480552
Alignment:
Q  4 tgagaccttgacaggagcacactcaaagatcccaagtcaac 44  Q
    ||||||||||| |||||||||||| ||||||||||||||||    
T  19480592 tgagaccttgagaggagcacactccaagatcccaagtcaac 19480552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 4621388 - 4621435
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  4621388 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 4621435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 7197397 - 7197444
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  7197397 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 7197444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 8077693 - 8077646
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  8077693 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 8077646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 24674439 - 24674392
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  24674439 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 24674392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 34778388 - 34778341
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  34778388 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 34778341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 37349569 - 37349522
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| |||||| |||||||||||||| |||||||||||||    
T  37349569 aggagcaaactctaagatctcaagtcaaccactaaaccaaccccaaat 37349522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 26608242 - 26608181
Alignment:
Q  1 acatgagaccttgacaggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    |||||||||||||| ||||||||| |  ||||||| || ||||||||||| ||||||||||||    
T  26608242 acatgagaccttgagaggagcacaattcaagatcc-aattcaaccactaggccaaccccaaat 26608181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 65
Target Start/End: Original strand, 8879260 - 8879293
Alignment:
Q  32 atcccaagtcaaccactagaccaaccccaaatag 65  Q
    ||||||||||||||||||||||||||| ||||||    
T  8879260 atcccaagtcaaccactagaccaaccctaaatag 8879293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 16899554 - 16899510
Alignment:
Q  19 agcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||||| |||||  ||||||||||||||| ||||||||||||    
T  16899554 agcacactccaagattacaagtcaaccactaggccaaccccaaat 16899510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 39714789 - 39714829
Alignment:
Q  4 tgagaccttgacaggagcacactcaaagatcccaagtcaac 44  Q
    ||||||||||| |||||||||||| ||||||||||| ||||    
T  39714789 tgagaccttgagaggagcacactccaagatcccaagccaac 39714829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 19145551 - 19145609
Alignment:
Q  5 gagaccttgacaggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    |||||||||| ||||||| |||| |||||||||||||||||||||| ||||||||||||    
T  19145551 gagaccttgagaggagcatactccaagatcccaagtcaaccactaggccaaccccaaat 19145609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 5067347 - 5067300
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| |||||||||||||||||||||||||||| ||||||    
T  5067347 aggagcaaactcgaagatcccaagtcaaccactagaccaactccaaat 5067300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 22253296 - 22253343
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| | |||||||||||||| |||||||||||||||||||||||    
T  22253296 aggagcaaagtcaaagatcccaagccaaccactagaccaaccccaaat 22253343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 25750762 - 25750809
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| |||||||||||||||||||||| ||||||||||||    
T  25750762 aggagcaaactccaagatcccaagtcaaccactaggccaaccccaaat 25750809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 37397759 - 37397710
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaatag 65  Q
    ||||||| |||| |||||| |||| |||||||||||||||||||||||||    
T  37397759 aggagcaaactccaagatcacaagccaaccactagaccaaccccaaatag 37397710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 4603823 - 4603776
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  4603823 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 4603776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 8484812 - 8484859
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  8484812 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 8484859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 8780536 - 8780477
Alignment:
Q  4 tgagaccttgacaggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||||||| |||||||||||| ||||||| | ||||||||||||  ||||| |||||    
T  8780536 tgagaccttgagaggagcacactccaagatccgatgtcaaccactaggtcaacctcaaat 8780477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 13108600 - 13108647
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  13108600 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 13108647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 21042664 - 21042723
Alignment:
Q  4 tgagaccttgacaggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||||||| ||||||| |||| ||||||||||  ||| ||||| |||||||||||||    
T  21042664 tgagaccttgaaaggagcaaactccaagatcccaaaccaatcactaaaccaaccccaaat 21042723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 22392747 - 22392700
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  22392747 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 22392700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 25343297 - 25343238
Alignment:
Q  4 tgagaccttgacaggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||||||| | ||||||| || |||||  ||||||||||||||| ||||||||||||    
T  25343297 tgagaccttgaaaagagcacaatccaagatttcaagtcaaccactaggccaaccccaaat 25343238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 25586978 - 25586931
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  25586978 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 25586931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 32059591 - 32059638
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  32059591 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 32059638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 33025538 - 33025479
Alignment:
Q  4 tgagaccttgacaggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||| ||||| |||||||||||| ||||||||||| ||||| | || ||||||||||||    
T  33025538 tgagatcttgagaggagcacactccaagatcccaagccaaccgcgaggccaaccccaaat 33025479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 36954864 - 36954817
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  36954864 aggagcaaactccaagatcccaaggcaaccactaggccaaccccaaat 36954817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 38631112 - 38631159
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  38631112 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 38631159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 31288082 - 31288144
Alignment:
Q  1 acatgagaccttgacaggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||||||||   ||||||| |||| ||||||||||| |||||||||| ||||||| ||||    
T  31288082 acatgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaacccaaaat 31288144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 2499317 - 2499378
Alignment:
Q  4 tgagaccttgacaggagcacactcaaagatcccaagtcaaccactagaccaaccccaaatag 65  Q
    |||||| |||| ||||||| | || |||||||||||||| ||||||  ||||||||||||||    
T  2499317 tgagactttgaaaggagcaaattccaagatcccaagtcagccactaagccaaccccaaatag 2499378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 23270675 - 23270720
Alignment:
Q  18 gagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  23270675 gagcaaactccaagatcccaagccaaccactaggccaaccccaaat 23270720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 38684254 - 38684209
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaa 61  Q
    ||||||| |||| |||||||||||||||||||| | ||||||||||    
T  38684254 aggagcaaactccaagatcccaagtcaaccactgggccaaccccaa 38684209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 204177 - 204221
Alignment:
Q  18 gagcacactcaaagatcccaagtcaaccactagaccaaccccaaa 62  Q
    ||||| |||| |||||| ||||||||||||||||||||| |||||    
T  204177 gagcaaactccaagatcacaagtcaaccactagaccaactccaaa 204221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 10399816 - 10399772
Alignment:
Q  19 agcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    |||| |||| ||||||| |||||||||||||||||||| ||||||    
T  10399816 agcaaactccaagatccaaagtcaaccactagaccaacaccaaat 10399772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 14302853 - 14302885
Alignment:
Q  19 agcacactcaaagatcccaagtcaaccactaga 51  Q
    ||||||||| |||||||||||||||||||||||    
T  14302853 agcacactctaagatcccaagtcaaccactaga 14302885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 15485430 - 15485490
Alignment:
Q  4 tgagaccttgacaggagcacactcaaagatcccaagtcaa-ccactagaccaaccccaaat 63  Q
    ||||||||||| |||||||||||| ||| ||||||| ||| || |||| ||||||||||||    
T  15485430 tgagaccttgagaggagcacactccaaggtcccaagccaacccgctaggccaaccccaaat 15485490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 28647031 - 28646970
Alignment:
Q  4 tgagaccttgacaggagcacactcaaagatcccaagtcaaccactagaccaaccccaaatag 65  Q
    ||||||||||| || ||||||||| ||||||||||||||| |||||| ||||||||||||||    
T  28647031 tgagaccttgagagaagcacactccaagatcccaagtcaatcactaggccaaccccaaatag 28646970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 8435846 - 8435893
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||    
T  8435846 aggagcaaactccaagatcccaagtcaaccactagaccaaccccaaat 8435893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 22696382 - 22696327
Alignment:
Q  4 tgagaccttgacaggagcacactcaaagatcccaagtcaaccactagaccaacccc 59  Q
    ||||||||||| |||||||||||| |||||||||| ||||||||||| ||||||||    
T  22696382 tgagaccttgagaggagcacactccaagatcccaaatcaaccactaggccaacccc 22696327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 3951130 - 3951189
Alignment:
Q  5 gagaccttgacaggagcacactcaaagatccc-aagtcaaccactagaccaaccccaaat 63  Q
    ||||| |||| |||||||||||| |||||||| ||| |||||||||||||||||||||||    
T  3951130 gagactttgagaggagcacactccaagatccccaagccaaccactagaccaaccccaaat 3951189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 10091238 - 10091191
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  10091238 aggagcaaactccaagatcccaagccaaccactagaccaaccccaaat 10091191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 12211674 - 12211733
Alignment:
Q  4 tgagaccttgacaggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||| ||||| |||||||||||| ||||||| ||| |||||||||| ||||||||||||    
T  12211674 tgagatcttgagaggagcacactccaagatcctaagccaaccactaggccaaccccaaat 12211733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 23330878 - 23330937
Alignment:
Q  4 tgagaccttgacaggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||||||| |||||||||||| || |||||||| |||||||||| | ||||||||||    
T  23330878 tgagaccttgagaggagcacactctaaaatcccaagccaaccactaggctaaccccaaat 23330937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 22638340 - 22638295
Alignment:
Q  18 gagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||| |||| |||||| ||||||||||||||||||||||||||||    
T  22638340 gagcaaactctaagatctcaagtcaaccactagaccaaccccaaat 22638295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 27312202 - 27312153
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaatag 65  Q
    ||||||| |||| ||||||||||| |||||||||| ||||||||||||||    
T  27312202 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaatag 27312153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 31197639 - 31197594
Alignment:
Q  18 gagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||| |||| ||||||||||| |||||||||||||||||||||||    
T  31197639 gagcaaactccaagatcccaagccaaccactagaccaaccccaaat 31197594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 21574245 - 21574301
Alignment:
Q  7 gaccttgacaggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    |||||||| |||||||||||| || |||||||  |||||||||| ||||||||||||    
T  21574245 gaccttgagaggagcacactccaaaatcccaaaccaaccactaggccaaccccaaat 21574301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 2103105 - 2103058
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  2103105 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 2103058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 2344349 - 2344302
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  2344349 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 2344302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 2751321 - 2751274
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  2751321 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 2751274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 3950924 - 3950987
Alignment:
Q  1 acatgagaccttgacaggagcacactcaaagatcc-caagtcaaccactagaccaaccccaaat 63  Q
    ||||||||| |||| |||||||| ||| ||||| | |||| |||||||||||||||||||||||    
T  3950924 acatgagacattgagaggagcacgctccaagattctcaagccaaccactagaccaaccccaaat 3950987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 7176013 - 7176060
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  7176013 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 7176060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 7275327 - 7275280
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  7275327 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 7275280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 13332574 - 13332621
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  13332574 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 13332621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 18044157 - 18044110
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  18044157 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 18044110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 21217984 - 21218031
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  21217984 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 21218031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 22119938 - 22119891
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  22119938 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 22119891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 23854446 - 23854399
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  23854446 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 23854399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 28003886 - 28003839
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| ||||||||||| |||||||||||    
T  28003886 aggagcaaactccaagatcccaagccaaccactagatcaaccccaaat 28003839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 32849641 - 32849594
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| |||||||||||||||||||||| | ||||||||||    
T  32849641 aggagcaaactccaagatcccaagtcaaccactaggctaaccccaaat 32849594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 40543061 - 40543108
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  40543061 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 40543108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 577739 - 577682
Alignment:
Q  6 agaccttgacaggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||||| | ||||| |||| |||||||||||  ||||||||| ||||||||||||    
T  577739 agaccttgaaatgagcaaactctaagatcccaagcaaaccactaggccaaccccaaat 577682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 37056272 - 37056215
Alignment:
Q  8 accttgacaggagcacactcaaagatcccaagtcaaccactagaccaaccccaaatag 65  Q
    ||||||| |||||||||||| |||||| |||  ||||||||| | |||||||||||||    
T  37056272 accttgagaggagcacactccaagatcacaaaccaaccactaaatcaaccccaaatag 37056215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 9769641 - 9769589
Alignment:
Q  11 ttgacaggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    |||| |||||||||||| ||||| |||| ||||||| ||| ||||||||||||    
T  9769641 ttgagaggagcacactccaagattccaaatcaaccattagcccaaccccaaat 9769589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 8479358 - 8479311
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||||    
T  8479358 aggagcacactccaagatcccaagtcaaccactaggccaaccccaaat 8479311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 17420921 - 17420868
Alignment:
Q  6 agaccttgacaggagcacactcaaagatcccaagtcaaccactagaccaacccc 59  Q
    ||||||||| ||||| |||||| |||||||||||||||||| ||||||||||||    
T  17420921 agaccttgaaaggagtacactccaagatcccaagtcaaccattagaccaacccc 17420868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 9208310 - 9208251
Alignment:
Q  4 tgagaccttgacaggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||||||| ||||||| |||| ||||||||||  ||||||||||| |||||||||||    
T  9208310 tgagaccttgagaggagcaaactccaagatcccaatccaaccactagaacaaccccaaat 9208251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 9843984 - 9843937
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  9843984 aggagcaaactccaagatcccaagccaaccactagaccaaccccaaat 9843937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 33499532 - 33499473
Alignment:
Q  4 tgagaccttgacaggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||||||| ||||||| |||| ||||||||||| ||||||| || ||||||||||||    
T  33499532 tgagaccttgagaggagcaaactccaagatcccaagccaaccaccaggccaaccccaaat 33499473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 9239021 - 9238974
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  9239021 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 9238974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 10377773 - 10377714
Alignment:
Q  4 tgagaccttgacaggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||||||||| |||||||||| |||||| |||| |||| ||| | ||||||||||||    
T  10377773 tgagaccttgacatgagcacactccaagatctcaagccaacaactgggccaaccccaaat 10377714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 11007211 - 11007164
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| ||||||||||| |||||||||||    
T  11007211 aggagcaaactccaagatcccaagccaaccactagatcaaccccaaat 11007164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 12591683 - 12591636
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  12591683 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 12591636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 15360249 - 15360296
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  15360249 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 15360296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 22576113 - 22576066
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  22576113 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 22576066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 28028598 - 28028555
Alignment:
Q  1 acatgagaccttgacaggagcacactcaaagatcccaagtcaac 44  Q
    |||||||||||||| |||||| ||||||||| ||||||||||||    
T  28028598 acatgagaccttgagaggagctcactcaaaggtcccaagtcaac 28028555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 28672113 - 28672066
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| |||||| ||||||||||||||| ||||||||||||    
T  28672113 aggagcaaactccaagatctcaagtcaaccactaggccaaccccaaat 28672066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 62
Target Start/End: Complemental strand, 11448917 - 11448871
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaa 62  Q
    ||||||| |||| ||||||||||| |||||||||| |||||||||||    
T  11448917 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaa 11448871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 28741980 - 28742021
Alignment:
Q  4 tgagaccttgacaggagcacactcaaagatcccaagtcaacc 45  Q
    ||||||||||| |||||||||||| ||||||||| |||||||    
T  28741980 tgagaccttgagaggagcacactccaagatcccaggtcaacc 28742021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 34147390 - 34147345
Alignment:
Q  18 gagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  34147390 gagcaaactccaagatcccaagccaaccactaggccaaccccaaat 34147345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 34160006 - 34159961
Alignment:
Q  18 gagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  34160006 gagcaaactccaagatcccaagccaaccactaggccaaccccaaat 34159961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 4252535 - 4252594
Alignment:
Q  4 tgagaccttgacaggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||||||| |||||||||||| |||||| |||| |||||||||| ||||||||||||    
T  4252535 tgagaccttgagaggagcacactccaagatctcaagccaaccactaggccaaccccaaat 4252594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 21362989 - 21362942
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| |||||||||||||||||||||| ||||||||||||    
T  21362989 aggagcaaactccaagatcccaagtcaaccactaggccaaccccaaat 21362942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 25289865 - 25289912
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  25289865 aggagcaaactccaagatcccaagccaaccactagaccaaccccaaat 25289912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 25344208 - 25344255
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| |||||||||||||||||||||| ||||||||||||    
T  25344208 aggagcaaactcgaagatcccaagtcaaccactaggccaaccccaaat 25344255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 40940871 - 40940824
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  40940871 aggagcaaactccaagatcccaagccaaccactagaccaaccccaaat 40940824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 48977434 - 48977387
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| |||||||||||||||||||||| ||||||||||||    
T  48977434 aggagcaaactccaagatcccaagtcaaccactaggccaaccccaaat 48977387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 7485676 - 7485723
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| |||||||||||||||||||||  ||||||||||||    
T  7485676 aggagcaaactccaagatcccaagtcaaccactatgccaaccccaaat 7485723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 8456301 - 8456348
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  8456301 aggagcaaactcgaagatcccaagccaaccactaggccaaccccaaat 8456348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 25379807 - 25379760
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  25379807 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 25379760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 30257670 - 30257623
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  30257670 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 30257623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 30807304 - 30807351
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  30807304 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 30807351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 34492726 - 34492773
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  34492726 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 34492773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 35492957 - 35492910
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  35492957 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 35492910  T

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Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 45529905 - 45529952
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  45529905 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 45529952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 46576394 - 46576347
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  46576394 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 46576347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 52821786 - 52821833
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| |||||||||||||||||||||| ||||| ||||||    
T  52821786 aggagcaaactccaagatcccaagtcaaccactaggccaacaccaaat 52821833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 53424327 - 53424374
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  53424327 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 53424374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 63
Target Start/End: Complemental strand, 24703737 - 24703703
Alignment:
Q  29 aagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||||||||||||||||||||||||| |||||    
T  24703737 aagatcccaagtcaaccactagaccaacctcaaat 24703703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 58
Target Start/End: Complemental strand, 32151470 - 32151428
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccc 58  Q
    ||||||| |||| |||||||||||||||||||||| |||||||    
T  32151470 aggagcaaactccaagatcccaagtcaaccactaggccaaccc 32151428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 50731372 - 50731418
Alignment:
Q  4 tgagaccttgacaggagcacactcaaagatcccaagtcaaccactag 50  Q
    ||||||||||| |||||||||||  |||||| |||||||||||||||    
T  50731372 tgagaccttgagaggagcacacttcaagatctcaagtcaaccactag 50731418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 50781482 - 50781436
Alignment:
Q  4 tgagaccttgacaggagcacactcaaagatcccaagtcaaccactag 50  Q
    ||||||||||| |||||||||||  |||||| |||||||||||||||    
T  50781482 tgagaccttgagaggagcacacttcaagatctcaagtcaaccactag 50781436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 18177040 - 18177085
Alignment:
Q  18 gagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||| |||| |||||| ||||||||||||||| ||||||||||||    
T  18177040 gagcaaactccaagatctcaagtcaaccactaggccaaccccaaat 18177085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 42430397 - 42430360
Alignment:
Q  6 agaccttgacaggagcacactcaaagatcccaagtcaa 43  Q
    ||||||||| |||||||||||| |||||||||||||||    
T  42430397 agaccttgagaggagcacactccaagatcccaagtcaa 42430360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 50162101 - 50162057
Alignment:
Q  4 tgagaccttgacaggagcacactcaaagatcccaagtcaaccact 48  Q
    ||||||||||| |||||| ||||  ||||||||||||||||||||    
T  50162101 tgagaccttgagaggagcgcacttcaagatcccaagtcaaccact 50162057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 55371421 - 55371485
Alignment:
Q  1 acatgagaccttgacaggagcacactcaaagatcccaagtcaaccactagaccaaccccaaatag 65  Q
    |||||||||||||| || |||| |||| || ||| |||| |||||||||| |||||| |||||||    
T  55371421 acatgagaccttgagagaagcatactccaaaatcgcaagccaaccactaggccaacctcaaatag 55371485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 41795 - 41842
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| |||||||||||||||||||||| ||||||||||||    
T  41795 aggagcaaactccaagatcccaagtcaaccactaggccaaccccaaat 41842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 27833 - 27775
Alignment:
Q  5 gagaccttgacaggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    |||||||||| ||||||| |||| || |||||||  |||||||||||||||||||||||    
T  27833 gagaccttgagaggagcaaactccaaaatcccaaaccaaccactagaccaaccccaaat 27775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 1207 - 1254
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  1207 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 1254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 5233 - 5280
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  5233 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 5280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 10844 - 10891
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  10844 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 10891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 9450 - 9497
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  9450 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 9497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 12151 - 12198
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  12151 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 12198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 8558 - 8605
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  8558 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 8605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 66808 - 66761
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaat 63  Q
    ||||||| |||| ||||||||||| ||||||||||||||| |||||||    
T  66808 aggagcaaactccaagatcccaagccaaccactagaccaatcccaaat 66761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 65
Target Start/End: Original strand, 12913 - 12954
Alignment:
Q  24 actcaaagatcccaagtcaaccactagaccaaccccaaatag 65  Q
    |||| |||||||||||||||||||||| |||| |||||||||    
T  12913 actccaagatcccaagtcaaccactaggccaatcccaaatag 12954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 7460 - 7509
Alignment:
Q  16 aggagcacactcaaagatcccaagtcaaccactagaccaaccccaaatag 65  Q
    ||||||| |||| ||||||||||| |||| ||||| ||||||||||||||    
T  7460 aggagcaaactccaagatcccaagccaactactaggccaaccccaaatag 7509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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