View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1773_low_110 (Length: 313)

Name: NF1773_low_110
Description: NF1773
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1773_low_110
NF1773_low_110
[»] scaffold0062 (2 HSPs)
scaffold0062 (13-155)||(42548-42690)
scaffold0062 (156-313)||(42759-42916)
[»] chr4 (36 HSPs)
chr4 (17-154)||(19927863-19928000)
chr4 (17-154)||(22172906-22173042)
chr4 (17-154)||(17276721-17276857)
chr4 (17-154)||(22351242-22351377)
chr4 (156-294)||(5679635-5679773)
chr4 (179-313)||(14649305-14649439)
chr4 (179-313)||(17275964-17276098)
chr4 (217-313)||(7582710-7582806)
chr4 (17-112)||(5679887-5679981)
chr4 (192-313)||(15165179-15165300)
chr4 (159-294)||(22357066-22357201)
chr4 (11-123)||(19092972-19093083)
chr4 (226-313)||(17710095-17710182)
chr4 (183-312)||(8969289-8969418)
chr4 (225-313)||(19092705-19092793)
chr4 (223-313)||(13692348-13692438)
chr4 (17-87)||(19635869-19635939)
chr4 (194-268)||(19929243-19929317)
chr4 (242-313)||(11253393-11253464)
chr4 (217-308)||(13909271-13909362)
chr4 (17-103)||(9850768-9850853)
chr4 (17-103)||(25024104-25024189)
chr4 (18-123)||(14649436-14649541)
chr4 (241-313)||(11933829-11933901)
chr4 (23-103)||(24638788-24638868)
chr4 (17-104)||(5956640-5956726)
chr4 (224-313)||(22173149-22173238)
chr4 (244-309)||(25094947-25095012)
chr4 (17-84)||(14572522-14572589)
chr4 (186-304)||(17672412-17672531)
chr4 (217-283)||(4615152-4615215)
chr4 (241-313)||(17217163-17217235)
chr4 (186-255)||(9851002-9851072)
chr4 (17-78)||(19604818-19604879)
chr4 (206-304)||(5956374-5956472)
chr4 (21-83)||(17672692-17672754)
[»] chr2 (51 HSPs)
chr2 (17-150)||(28605499-28605631)
chr2 (17-154)||(29849964-29850100)
chr2 (12-154)||(28765903-28766045)
chr2 (17-154)||(32085974-32086109)
chr2 (197-313)||(23933225-23933341)
chr2 (217-313)||(26667685-26667781)
chr2 (192-278)||(27908756-27908842)
chr2 (17-154)||(29031810-29031945)
chr2 (157-284)||(28605704-28605831)
chr2 (204-285)||(13776773-13776854)
chr2 (161-278)||(20174175-20174292)
chr2 (156-313)||(29849738-29849895)
chr2 (156-312)||(25884993-25885149)
chr2 (186-313)||(23011326-23011453)
chr2 (53-148)||(23933016-23933109)
chr2 (224-302)||(18121887-18121965)
chr2 (216-313)||(17198245-17198342)
chr2 (192-313)||(29143293-29143414)
chr2 (17-146)||(20173962-20174092)
chr2 (217-301)||(30412020-30412104)
chr2 (17-96)||(23006555-23006633)
chr2 (17-79)||(11465390-11465452)
chr2 (156-313)||(24090491-24090649)
chr2 (223-313)||(25530825-25530915)
chr2 (204-313)||(29027907-29028016)
chr2 (17-154)||(29833763-29833898)
chr2 (158-313)||(17675232-17675387)
chr2 (17-103)||(9761773-9761859)
chr2 (223-310)||(28929057-28929144)
chr2 (76-142)||(11467371-11467436)
chr2 (156-252)||(15339711-15339809)
chr2 (156-252)||(12950586-12950683)
chr2 (228-313)||(17635448-17635533)
chr2 (224-313)||(25535650-25535739)
chr2 (217-313)||(17743139-17743235)
chr2 (225-313)||(19199768-19199856)
chr2 (17-84)||(13777133-13777200)
chr2 (17-84)||(22568292-22568359)
chr2 (183-294)||(23006791-23006902)
chr2 (17-84)||(25887220-25887286)
chr2 (17-84)||(31804135-31804202)
chr2 (238-312)||(22379158-22379232)
chr2 (17-94)||(23011083-23011159)
chr2 (17-114)||(25884696-25884792)
chr2 (38-114)||(18552236-18552311)
chr2 (17-89)||(20171962-20172034)
chr2 (17-80)||(12950384-12950447)
chr2 (218-253)||(17890466-17890501)
chr2 (17-84)||(20174887-20174954)
chr2 (17-102)||(15339937-15340021)
chr2 (204-269)||(25939583-25939648)
[»] scaffold0008 (2 HSPs)
scaffold0008 (17-149)||(55507-55639)
scaffold0008 (159-313)||(55270-55424)
[»] chr7 (69 HSPs)
chr7 (17-153)||(7318957-7319092)
chr7 (17-154)||(4987142-4987278)
chr7 (17-154)||(4991240-4991376)
chr7 (17-154)||(10586263-10586399)
chr7 (17-154)||(3190388-3190523)
chr7 (17-154)||(15870232-15870364)
chr7 (17-153)||(17152387-17152522)
chr7 (17-154)||(3735230-3735369)
chr7 (17-148)||(8312877-8313006)
chr7 (217-313)||(8978596-8978692)
chr7 (187-309)||(3735010-3735132)
chr7 (192-312)||(11803412-11803532)
chr7 (156-283)||(9574833-9574960)
chr7 (192-313)||(8877764-8877885)
chr7 (196-283)||(6014031-6014118)
chr7 (211-313)||(15870006-15870109)
chr7 (225-310)||(20582602-20582687)
chr7 (217-313)||(13289039-13289135)
chr7 (225-313)||(16058635-16058723)
chr7 (226-313)||(17190838-17190925)
chr7 (232-294)||(4986939-4987001)
chr7 (232-294)||(4991037-4991099)
chr7 (17-83)||(7397850-7397916)
chr7 (224-309)||(17152749-17152834)
chr7 (17-154)||(18202538-18202673)
chr7 (238-310)||(39272787-39272859)
chr7 (239-294)||(18368661-18368716)
chr7 (18-103)||(6014258-6014342)
chr7 (19-124)||(9313077-9313181)
chr7 (18-123)||(9575059-9575164)
chr7 (183-283)||(1586404-1586504)
chr7 (225-313)||(8053730-8053818)
chr7 (224-312)||(10586625-10586713)
chr7 (11-83)||(17830280-17830352)
chr7 (17-93)||(18663124-18663199)
chr7 (17-84)||(4819557-4819624)
chr7 (242-313)||(13277880-13277951)
chr7 (17-84)||(19153925-19153992)
chr7 (17-84)||(20753324-20753391)
chr7 (17-84)||(21233165-21233232)
chr7 (18-84)||(9730937-9731003)
chr7 (224-313)||(2574280-2574369)
chr7 (19-124)||(9257072-9257176)
chr7 (156-284)||(16297372-16297501)
chr7 (224-313)||(17077452-17077541)
chr7 (223-312)||(18202809-18202897)
chr7 (192-304)||(1847879-1847991)
chr7 (17-73)||(4786524-4786580)
chr7 (187-255)||(6006469-6006537)
chr7 (12-105)||(13759284-13759378)
chr7 (17-84)||(10941807-10941874)
chr7 (17-103)||(1588209-1588294)
chr7 (223-313)||(13759564-13759654)
chr7 (17-103)||(31493599-31493684)
chr7 (240-313)||(13418865-13418938)
chr7 (231-284)||(22066875-22066928)
chr7 (238-278)||(4449378-4449418)
chr7 (17-81)||(9131512-9131576)
chr7 (17-81)||(22338741-22338805)
chr7 (186-285)||(1587970-1588069)
chr7 (247-313)||(7318684-7318751)
chr7 (186-255)||(17830035-17830105)
chr7 (216-269)||(1584991-1585044)
chr7 (223-268)||(5107095-5107140)
chr7 (19-84)||(6006706-6006770)
chr7 (17-84)||(21501953-21502017)
chr7 (238-270)||(1861343-1861375)
chr7 (156-228)||(4819339-4819411)
chr7 (224-284)||(22339010-22339070)
[»] chr6 (37 HSPs)
chr6 (19-154)||(6630018-6630153)
chr6 (187-313)||(11177344-11177470)
chr6 (156-312)||(6630222-6630378)
chr6 (17-154)||(11177570-11177707)
chr6 (186-313)||(15466775-15466902)
chr6 (186-313)||(21688413-21688540)
chr6 (17-154)||(19245210-19245345)
chr6 (225-313)||(21907846-21907934)
chr6 (186-313)||(19244986-19245113)
chr6 (158-313)||(22568250-22568404)
chr6 (156-285)||(18074948-18075077)
chr6 (156-255)||(1635431-1635531)
chr6 (229-313)||(27124171-27124255)
chr6 (17-112)||(8245608-8245702)
chr6 (238-313)||(11136288-11136362)
chr6 (219-313)||(20144697-20144791)
chr6 (219-313)||(22188048-22188142)
chr6 (223-309)||(22412682-22412768)
chr6 (17-84)||(14078806-14078873)
chr6 (238-309)||(20005553-20005624)
chr6 (17-84)||(22568509-22568576)
chr6 (224-278)||(8245371-8245425)
chr6 (219-313)||(9517127-9517221)
chr6 (204-310)||(14072500-14072606)
chr6 (238-312)||(17382380-17382454)
chr6 (223-313)||(23009028-23009118)
chr6 (223-313)||(23779246-23779336)
chr6 (239-312)||(22813379-22813452)
chr6 (53-103)||(21688210-21688259)
chr6 (17-84)||(1635692-1635759)
chr6 (23-79)||(24251606-24251662)
chr6 (217-268)||(17823365-17823416)
chr6 (258-313)||(28933292-28933347)
chr6 (17-83)||(4340451-4340517)
chr6 (184-268)||(4340189-4340274)
chr6 (217-265)||(14722389-14722437)
chr6 (219-255)||(24251834-24251870)
[»] chr8 (27 HSPs)
chr8 (17-150)||(37528083-37528216)
chr8 (17-154)||(25181782-25181919)
chr8 (19-154)||(19787388-19787522)
chr8 (193-313)||(7983980-7984099)
chr8 (186-313)||(24113915-24114042)
chr8 (223-313)||(17101573-17101663)
chr8 (17-93)||(2637697-2637772)
chr8 (225-309)||(25226480-25226564)
chr8 (238-313)||(19264419-19264494)
chr8 (217-313)||(17509580-17509676)
chr8 (225-313)||(18448211-18448299)
chr8 (223-278)||(17996934-17996989)
chr8 (156-309)||(24110271-24110424)
chr8 (31-135)||(7984219-7984321)
chr8 (238-313)||(24723273-24723348)
chr8 (34-148)||(14528736-14528847)
chr8 (223-278)||(24269973-24270028)
chr8 (224-313)||(19787143-19787232)
chr8 (11-84)||(21315337-21315410)
chr8 (249-313)||(14528549-14528613)
chr8 (238-278)||(26832006-26832046)
chr8 (238-283)||(23892849-23892894)
chr8 (19-67)||(30832091-30832139)
chr8 (17-84)||(6885669-6885736)
chr8 (17-84)||(13314323-13314390)
chr8 (17-84)||(28276116-28276183)
chr8 (204-304)||(30121734-30121834)
[»] chr1 (58 HSPs)
chr1 (157-283)||(24214962-24215088)
chr1 (17-154)||(33191312-33191447)
chr1 (17-154)||(9787292-9787425)
chr1 (53-150)||(22664799-22664896)
chr1 (224-313)||(15543635-15543724)
chr1 (156-301)||(33191098-33191243)
chr1 (17-148)||(15572750-15572884)
chr1 (17-154)||(24281911-24282051)
chr1 (157-312)||(14779960-14780115)
chr1 (219-313)||(25404091-25404185)
chr1 (224-313)||(18528859-18528948)
chr1 (156-303)||(9787494-9787641)
chr1 (156-263)||(22664621-22664728)
chr1 (225-308)||(26612679-26612762)
chr1 (195-313)||(25960738-25960856)
chr1 (192-301)||(16112159-16112268)
chr1 (192-313)||(16179415-16179536)
chr1 (19-84)||(16360575-16360640)
chr1 (156-255)||(28008572-28008670)
chr1 (156-313)||(14781420-14781577)
chr1 (17-114)||(16112390-16112486)
chr1 (217-313)||(16916562-16916656)
chr1 (156-313)||(18100545-18100702)
chr1 (224-313)||(21334384-21334473)
chr1 (156-312)||(21449490-21449646)
chr1 (217-313)||(21985618-21985714)
chr1 (17-154)||(25960490-25960630)
chr1 (238-313)||(727844-727919)
chr1 (17-84)||(17120835-17120901)
chr1 (238-313)||(18826032-18826107)
chr1 (186-313)||(24281684-24281811)
chr1 (245-313)||(18830858-18830926)
chr1 (157-304)||(16360290-16360437)
chr1 (17-84)||(34481640-34481707)
chr1 (156-253)||(51472777-51472875)
chr1 (17-103)||(16787079-16787164)
chr1 (238-312)||(18735886-18735960)
chr1 (223-313)||(23180172-23180262)
chr1 (238-284)||(25403728-25403774)
chr1 (17-83)||(26021441-26021507)
chr1 (17-84)||(9402296-9402363)
chr1 (238-313)||(24054355-24054429)
chr1 (238-292)||(22623299-22623353)
chr1 (239-313)||(26648654-26648728)
chr1 (240-313)||(15160153-15160226)
chr1 (101-154)||(18100424-18100476)
chr1 (31-83)||(12012170-12012222)
chr1 (17-84)||(28008818-28008885)
chr1 (17-84)||(31235287-31235354)
chr1 (192-285)||(12012381-12012475)
chr1 (187-284)||(15807582-15807680)
chr1 (17-71)||(23036016-23036070)
chr1 (223-313)||(29242848-29242938)
chr1 (11-84)||(15812471-15812544)
chr1 (240-313)||(15812770-15812843)
chr1 (17-66)||(32382318-32382367)
chr1 (263-303)||(25404219-25404259)
chr1 (217-269)||(44795824-44795876)
[»] chr5 (34 HSPs)
chr5 (17-154)||(24264799-24264934)
chr5 (17-154)||(24341430-24341565)
chr5 (156-313)||(34488043-34488200)
chr5 (225-313)||(24659650-24659738)
chr5 (186-312)||(18207828-18207954)
chr5 (186-313)||(20563714-20563841)
chr5 (192-313)||(16523164-16523288)
chr5 (11-93)||(17170879-17170960)
chr5 (223-309)||(19008178-19008264)
chr5 (217-278)||(24243628-24243689)
chr5 (223-313)||(15375555-15375645)
chr5 (223-313)||(24140823-24140913)
chr5 (17-103)||(34488322-34488407)
chr5 (224-313)||(20549340-20549429)
chr5 (225-313)||(17432223-17432311)
chr5 (185-313)||(24265032-24265160)
chr5 (185-313)||(24341663-24341791)
chr5 (17-101)||(24661902-24661985)
chr5 (238-313)||(34128979-34129054)
chr5 (218-312)||(17314727-17314821)
chr5 (17-103)||(18207588-18207673)
chr5 (192-313)||(20744235-20744356)
chr5 (186-277)||(24266520-24266611)
chr5 (186-277)||(24343151-24343242)
chr5 (17-84)||(25401655-25401722)
chr5 (31-93)||(24266337-24266398)
chr5 (31-93)||(24342968-24343029)
chr5 (186-304)||(36175550-36175668)
chr5 (225-308)||(20859066-20859149)
chr5 (17-103)||(17470604-17470689)
chr5 (156-284)||(25401868-25401998)
chr5 (238-276)||(28665187-28665225)
chr5 (19-84)||(22871366-22871431)
chr5 (204-256)||(24167104-24167156)
[»] scaffold0005 (3 HSPs)
scaffold0005 (179-313)||(167853-167987)
scaffold0005 (18-123)||(167751-167856)
scaffold0005 (17-84)||(244787-244854)
[»] chr3 (36 HSPs)
chr3 (192-313)||(12411488-12411609)
chr3 (158-313)||(17156199-17156354)
chr3 (183-294)||(2723403-2723514)
chr3 (238-313)||(4650613-4650688)
chr3 (20-111)||(12805497-12805586)
chr3 (156-284)||(21302356-21302485)
chr3 (11-84)||(41509170-41509243)
chr3 (217-313)||(19167785-19167881)
chr3 (223-313)||(20023173-20023263)
chr3 (17-82)||(12373291-12373356)
chr3 (17-84)||(2166992-2167059)
chr3 (17-84)||(16245046-16245113)
chr3 (192-278)||(16229610-16229696)
chr3 (17-83)||(21326048-21326114)
chr3 (184-285)||(8144050-8144151)
chr3 (192-273)||(8170276-8170357)
chr3 (17-114)||(8267619-8267715)
chr3 (206-283)||(8446259-8446336)
chr3 (17-84)||(5509044-5509111)
chr3 (222-309)||(19908724-19908811)
chr3 (17-84)||(31285300-31285367)
chr3 (17-103)||(23756473-23756559)
chr3 (231-284)||(8319402-8319455)
chr3 (11-84)||(20430453-20430526)
chr3 (231-303)||(8267268-8267340)
chr3 (186-255)||(21325807-21325877)
chr3 (238-311)||(8882768-8882841)
chr3 (44-93)||(23700303-23700352)
chr3 (44-93)||(23718758-23718807)
chr3 (44-93)||(23737214-23737263)
chr3 (217-277)||(3116011-3116071)
chr3 (156-228)||(19171394-19171466)
chr3 (18-103)||(2723179-2723263)
chr3 (17-70)||(9781234-9781287)
chr3 (186-255)||(21825389-21825458)
chr3 (21-81)||(22245999-22246059)
[»] scaffold0034 (1 HSPs)
scaffold0034 (217-313)||(76794-76890)
[»] scaffold0671 (1 HSPs)
scaffold0671 (223-313)||(819-909)
[»] scaffold0035 (1 HSPs)
scaffold0035 (192-312)||(70249-70369)
[»] scaffold0054 (1 HSPs)
scaffold0054 (219-313)||(72440-72534)
[»] scaffold1869 (1 HSPs)
scaffold1869 (192-313)||(23-144)
[»] scaffold0063 (1 HSPs)
scaffold0063 (225-313)||(51204-51292)
[»] scaffold0040 (1 HSPs)
scaffold0040 (192-284)||(26252-26344)
[»] scaffold0024 (2 HSPs)
scaffold0024 (156-313)||(39994-40151)
scaffold0024 (84-154)||(40241-40310)
[»] scaffold0002 (1 HSPs)
scaffold0002 (217-285)||(96423-96491)
[»] scaffold0111 (1 HSPs)
scaffold0111 (156-255)||(4045-4146)
[»] scaffold0056 (1 HSPs)
scaffold0056 (238-303)||(21662-21727)
[»] scaffold0032 (1 HSPs)
scaffold0032 (217-313)||(103818-103914)
[»] scaffold0263 (2 HSPs)
scaffold0263 (244-313)||(15989-16058)
scaffold0263 (225-259)||(17381-17415)
[»] scaffold0622 (1 HSPs)
scaffold0622 (186-255)||(1224-1294)
[»] scaffold0043 (2 HSPs)
scaffold0043 (23-84)||(89185-89247)
scaffold0043 (186-255)||(89417-89486)
[»] scaffold0001 (1 HSPs)
scaffold0001 (18-84)||(81308-81374)
[»] scaffold0386 (2 HSPs)
scaffold0386 (17-70)||(6984-7037)
scaffold0386 (33-70)||(10020-10057)


Alignment Details
Target: scaffold0062 (Bit Score: 131; Significance: 6e-68; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 13 - 155
Target Start/End: Original strand, 42548 - 42690
Alignment:
Q  13 taggagtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaacaagcaccaaggg 112  Q
    |||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42548 taggagtaagtacttagaaggtgacattactaatattgagtaaaatctgttgaacctaggatgtaactagtttattaattagggcaacaagcaccaaggg 42647  T
Q  113 gaataaacctaagtaagaccattgtcctcgacctctaggtaaa 155  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  42648 gaataaacctaagtaagaccattgtcctcgacctctaggtaaa 42690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 156 - 313
Target Start/End: Original strand, 42759 - 42916
Alignment:
Q  156 cctaagattcatagatgtgttgtcctacaagaacactggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttga 255  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  42759 cctaagattcatagatgggttgtcctacaggaacactggccttcatttcctttgaaaatcttggaatgccaatttaagtctatgtttcaattacctttga 42858  T
Q  256 attagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    |||||||||||||| |||||||| |||||  |||||||||||||||||||||||||||    
T  42859 attagcaagaccccacacgtaaggatcaccgtgcgatcatcaggtgcaattagccatc 42916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 98; Significance: 3e-48; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 17 - 154
Target Start/End: Original strand, 19927863 - 19928000
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaacaagcaccaaggggaat 116  Q
    ||||| ||||||| |||||||||||  |||||||| |||||| || |||||||||||||||||||||||||||||| ||| ||||||||||||||| |||    
T  19927863 agtaattacttaggaggtgacattaataatattgagtaaaatctgctgaacctaggatgtaactagtttattaatttgggaaacaagcaccaagggaaat 19927962  T
Q  117 aaacctaagtaagaccattgtcctcgacctctaggtaa 154  Q
    ||||||||||||||||||||||||||||||||||||||    
T  19927963 aaacctaagtaagaccattgtcctcgacctctaggtaa 19928000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 17 - 154
Target Start/End: Original strand, 22172906 - 22173042
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaacaagcaccaaggggaat 116  Q
    |||||||||| || |||| ||||||| |||| ||| |||||| ||||||||||||||||||| ||||||| ||||||||| ||||| |||||| ||||||    
T  22172906 agtaagtactaaggaggtaacattactaatactgagtaaaatatgttgaacctaggatgtaagtagtttagtaattagggaaacaatcaccaaagggaat 22173005  T
Q  117 aaacctaagtaagaccattgtcctcgacctctaggtaa 154  Q
    |||||| |||||||||||||||||||||||||| ||||    
T  22173006 aaacct-agtaagaccattgtcctcgacctctaagtaa 22173042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 17276857 - 17276721
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaacaagcaccaaggggaat 116  Q
    ||||||||||||| |||| | ||||| |||||||| |||||| |||||||||||| |||||||||||||  |||||| || |||||||||||| ||||||    
T  17276857 agtaagtacttaggaggttatattactaatattgagtaaaatatgttgaacctagaatgtaactagtttggtaattatggaaacaagcaccaatgggaat 17276758  T
Q  117 aaacctaagtaagaccattgtcctcgacctctaggtaa 154  Q
    ||| || |||||||||||||||||| ||||||||||||    
T  17276757 aaatct-agtaagaccattgtcctcaacctctaggtaa 17276721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 154
Target Start/End: Original strand, 22351242 - 22351377
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaacaagcaccaaggggaat 116  Q
    ||||||||||||| |||||||||||| |||||| | ||||||  |||||||||| |||||||||||||||||| |||||| ||||| |||||| ||||||    
T  22351242 agtaagtacttaggaggtgacattactaatatttattaaaataagttgaacctatgatgtaactagtttattacttagggaaacaatcaccaa-gggaat 22351340  T
Q  117 aaacctaagtaagaccattgtcctcgacctctaggtaa 154  Q
    ||||||| || |||||||| ||||| ||||||||||||    
T  22351341 aaacctaggt-agaccattatcctcaacctctaggtaa 22351377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 156 - 294
Target Start/End: Complemental strand, 5679773 - 5679635
Alignment:
Q  156 cctaagattcatagatgtgttgtcctacaagaacactggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttga 255  Q
    ||||||||||||||||| |  | ||| |  ||||||||||||| ||| |||||| ||| || |||| |||||||||||| | ||||||||||||||||||    
T  5679773 cctaagattcatagatgggaagaccttcgggaacactggcctttattgcctttggaaacctaggaacgccaatttaagtttatgtttcaattacctttga 5679674  T
Q  256 attagcaagaccccgcacgtaagcatcactatgcgatca 294  Q
    |||| |||||||||||||||||| ||||| |||||||||    
T  5679673 attatcaagaccccgcacgtaaggatcaccatgcgatca 5679635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 179 - 313
Target Start/End: Complemental strand, 14649439 - 14649305
Alignment:
Q  179 cctacaagaacactggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaag 278  Q
    |||||||||||| ||||| ||||| |||||| ||||||||||| ||||||| |||||| ||||| |||||||||||||||||||||||||||||  ||||    
T  14649439 cctacaagaacattggccctcattccctttggaaatcttggaacgccaattcaagtctatgttttaattacctttgaattagcaagaccccgcatataag 14649340  T
Q  279 catcactatgcgatcatcaggtgcaattagccatc 313  Q
     ||||   ||||||||  ||||||| |||||||||    
T  14649339 gatcatcgtgcgatcagtaggtgcagttagccatc 14649305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 179 - 313
Target Start/End: Complemental strand, 17276098 - 17275964
Alignment:
Q  179 cctacaagaacactggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaag 278  Q
    ||||||| |||| ||||||||||| |||| | | ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  17276098 cctacaaaaacattggccttcattaccttcggatatcttggaaagccaatttaagtctatgtttcaattacctttgaattagcaagaccccgcacataag 17275999  T
Q  279 catcactatgcgatcatcaggtgcaattagccatc 313  Q
     |||||    |||||| ||| |||| |||||||||    
T  17275998 gatcaccgcacgatcagcagatgcagttagccatc 17275964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 217 - 313
Target Start/End: Complemental strand, 7582806 - 7582710
Alignment:
Q  217 tggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    ||||| |||||||||||| | ||||||||||| ||||||||||||||||||||||||||||| |||||  |||||||| ||||||||||||||||||    
T  7582806 tggaacgccaatttaagtttatgtttcaattaactttgaattagcaagaccccgcacgtaaggatcaccgtgcgatcagcaggtgcaattagccatc 7582710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 17 - 112
Target Start/End: Complemental strand, 5679981 - 5679887
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaacaagcaccaaggg 112  Q
    ||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||||||| | ||||||||||| |||||| ||||||||    
T  5679981 agtaagtacttaggaggtgacattactaatattgagtaaaatttgttgaacctaggatgtaactag-taattaattagggaaacaagtaccaaggg 5679887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 192 - 313
Target Start/End: Complemental strand, 15165300 - 15165179
Alignment:
Q  192 tggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcga 291  Q
    ||||||||||| |||| |||||   |||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||| ||||   |||||    
T  15165300 tggccttcattgccttggaaaaaactggaatgccaatttaattttatgtttcaattacctttgaattagcaagaccccgcacgtaaggatcatcgtgcga 15165201  T
Q  292 tcatcaggtgcaattagccatc 313  Q
    ||| |||||||| ||| |||||    
T  15165200 tcagcaggtgcagttaaccatc 15165179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 159 - 294
Target Start/End: Original strand, 22357066 - 22357201
Alignment:
Q  159 aagattcatagatgtgttgtcctacaagaacactggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttgaatt 258  Q
    |||||||||||||| |  | |||||||||||| || ||||||||   |||| ||||||||||| |||||||||| ||| ||| |||||||||||||||||    
T  22357066 aagattcatagatgggccgacctacaagaacattgaccttcattggttttggaaatcttggaacgccaatttaattctatgtgtcaattacctttgaatt 22357165  T
Q  259 agcaagaccccgcacgtaagcatcactatgcgatca 294  Q
    |  ||||||||||||||||| ||||  |||||||||    
T  22357166 acaaagaccccgcacgtaaggatcatcatgcgatca 22357201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 11 - 123
Target Start/End: Complemental strand, 19093083 - 19092972
Alignment:
Q  11 cataggagtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaacaagcaccaag 110  Q
    ||||| ||||||||||||| |||||||||||| |||| ||| |||||| |||||||| |||||||||||||| ||||||||||||| ||||||||  |||    
T  19093083 catagtagtaagtacttaggaggtgacattactaatactgagtaaaatctgttgaacataggatgtaactag-ttattaattagggaaacaagcatgaag 19092985  T
Q  111 gggaataaaccta 123  Q
    |||| | ||||||    
T  19092984 gggagtgaaccta 19092972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 226 - 313
Target Start/End: Complemental strand, 17710182 - 17710095
Alignment:
Q  226 aatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||| |||| |||||  |||||||| |||||||| |||||||||    
T  17710182 aatttaagtttatgtttcaattacctttgaattagcaagaccccgcacttaaggatcaccgtgcgatcaacaggtgcagttagccatc 17710095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 183 - 312
Target Start/End: Original strand, 8969289 - 8969418
Alignment:
Q  183 caagaacactggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatc 282  Q
    |||||| | ||| ||||||| |||||  |||||| |||| ||||||| |||||| ||||| ||||||||||||||||| |||||||| |||||||| |||    
T  8969289 caagaaaattggtcttcattgcctttagaaatctaggaacgccaattgaagtctatgtttgaattacctttgaattagtaagaccccacacgtaaggatc 8969388  T
Q  283 actatgcgatcatcaggtgcaattagccat 312  Q
    ||  | |||||| ||||||||| |||||||    
T  8969389 accgtacgatcaacaggtgcaactagccat 8969418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 225 - 313
Target Start/End: Complemental strand, 19092793 - 19092705
Alignment:
Q  225 caatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    |||||||||| | |||||||||||||||||||||||||||||||| |||||||  |||| |||||||| | |||||||| |||||||||    
T  19092793 caatttaagtttatgtttcaattacctttgaattagcaagaccccacacgtaaagatcagtatgcgatgagcaggtgcagttagccatc 19092705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 223 - 313
Target Start/End: Original strand, 13692348 - 13692438
Alignment:
Q  223 gccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    |||||||||||| | |||||||||||||||||||||||||||||||||||| |||| |||||  ||||||||  ||||| | |||||||||    
T  13692348 gccaatttaagtttatgtttcaattacctttgaattagcaagaccccgcacataaggatcaccgtgcgatcagtaggtggagttagccatc 13692438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 19635869 - 19635939
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttat 87  Q
    ||||||||||||| |||||||||||| |||||||| ||||||||||||||| ||||| |||||||||||||    
T  19635869 agtaagtacttaggaggtgacattactaatattgagtaaaatttgttgaacttaggaggtaactagtttat 19635939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 194 - 268
Target Start/End: Original strand, 19929243 - 19929317
Alignment:
Q  194 gccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccc 268  Q
    ||||||||| |||||| ||||||||||||  |||||||||| | |||||||||||||||||||||||||||||||    
T  19929243 gccttcattgcctttggaaatcttggaatctcaatttaagtatatgtttcaattacctttgaattagcaagaccc 19929317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 11253393 - 11253464
Alignment:
Q  242 tcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    |||||||||||||||||||||||| |||||||||||| ||||| ||| ||||| |||||||| |||||||||    
T  11253393 tcaattacctttgaattagcaagatcccgcacgtaaggatcaccatgtgatcaacaggtgcagttagccatc 11253464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 217 - 308
Target Start/End: Complemental strand, 13909362 - 13909271
Alignment:
Q  217 tggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattag 308  Q
    ||||||| | ||||||||||  ||||||||||||||||||||| |||||||||||||||||| |||| |||| | ||| || ||||||||||    
T  13909362 tggaatgtcgatttaagtctacgtttcaattacctttgaattaacaagaccccgcacgtaaggatcattatgtggtcagcaagtgcaattag 13909271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 9850768 - 9850853
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaacaag 103  Q
    |||||||||||||||| ||||||||| |||||||| |||||| || ||||||| ||||||||||| ||||||||||| || ||||||    
T  9850768 agtaagtacttagaagatgacattactaatattgagtaaaatctgatgaacctgggatgtaacta-tttattaattaaggaaacaag 9850853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 25024189 - 25024104
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaacaag 103  Q
    ||||||||||||| |||||||||||| |||||||| |||||| || |||||||| ||||||||||| |||||||||| || ||||||    
T  25024189 agtaagtacttaggaggtgacattactaatattgagtaaaatctgctgaacctatgatgtaactag-ttattaattaaggaaacaag 25024104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 123
Target Start/End: Complemental strand, 14649541 - 14649436
Alignment:
Q  18 gtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaacaagcaccaaggggaata 117  Q
    |||||||||||| |||||||||||| | |||||| |||||| |  ||||  ||||||||||||| |||||||||| ||| |||||| ||||| ||| |||    
T  14649541 gtaagtacttaggaggtgacattactattattgagtaaaatctactgaatgtaggatgtaactaatttattaattggggaaacaagtaccaacgggtata 14649442  T
Q  118 aaccta 123  Q
    ||||||    
T  14649441 aaccta 14649436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 313
Target Start/End: Complemental strand, 11933901 - 11933829
Alignment:
Q  241 ttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    ||||||||||||||||||| |||||||||||||||||| |||||  |||||||| || ||||| |||||||||    
T  11933901 ttcaattacctttgaattaacaagaccccgcacgtaaggatcacggtgcgatcaacaagtgcagttagccatc 11933829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 103
Target Start/End: Original strand, 24638788 - 24638868
Alignment:
Q  23 tacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaacaag 103  Q
    ||||||| |||||||||||| |||||||| ||||||||| ||||||||||| |||||||||| | |||||| || ||||||    
T  24638788 tacttaggaggtgacattactaatattgagtaaaatttgctgaacctaggaggtaactagttaaataattaaggaaacaag 24638868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 5956726 - 5956640
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaacaagc 104  Q
    ||||||||||||  |||||||||||  ||||| || |||||||||||||| ||||||||||||||| |||||||||| || |||||||    
T  5956726 agtaagtacttaagaggtgacattattaatatcgagtaaaatttgttgaagctaggatgtaactag-ttattaattaaggaaacaagc 5956640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 224 - 313
Target Start/End: Original strand, 22173149 - 22173238
Alignment:
Q  224 ccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    ||||||||||| | |||||||||||||||||||||||||||||| |||||||  | |||||| ||| |||  |||  |||||||||||||    
T  22173149 ccaatttaagtttatgtttcaattacctttgaattagcaagacctcgcacgtgtggatcactgtgcaatctgcagacgcaattagccatc 22173238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 244 - 309
Target Start/End: Complemental strand, 25095012 - 25094947
Alignment:
Q  244 aattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagc 309  Q
    |||||||||||||||||||||||||| ||| |||| |||||| |||||||| |||||||| |||||    
T  25095012 aattacctttgaattagcaagaccccacacttaaggatcactgtgcgatcagcaggtgcagttagc 25094947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 14572589 - 14572522
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtt 84  Q
    ||||||||||||| | |||||||||| |||||||| ||||||  | ||||||||||||||||||||||    
T  14572589 agtaagtacttaggaagtgacattactaatattgagtaaaatccgctgaacctaggatgtaactagtt 14572522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 304
Target Start/End: Complemental strand, 17672531 - 17672412
Alignment:
Q  186 gaacactggccttcatttcctttgaaaatcttggaatgccaatttaag-tctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcac 284  Q
    ||||| ||||||||||| |||||| |||| | ||||||||||| |||| ||| ||||||||||||||||||  | | |||||||| || ||||| |||||    
T  17672531 gaacattggccttcattgcctttggaaatttaggaatgccaatataaggtctatgtttcaattacctttgaggtggtaagaccccacatgtaaggatcac 17672432  T
Q  285 tatgcgatcatcaggtgcaa 304  Q
    | || || || |||||||||    
T  17672431 tgtgtgaccagcaggtgcaa 17672412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 283
Target Start/End: Complemental strand, 4615215 - 4615152
Alignment:
Q  217 tggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatca 283  Q
    ||||| |||||||||||| | ||||||||||||||||||||||||   |||||||||||||| ||||    
T  4615215 tggaaagccaatttaagtttatgtttcaattacctttgaattagc---accccgcacgtaaggatca 4615152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 241 - 313
Target Start/End: Complemental strand, 17217235 - 17217163
Alignment:
Q  241 ttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    |||||||||||||||||||||| |||||| |||||||| ||||   || ||||| ||||||||||||| ||||    
T  17217235 ttcaattacctttgaattagcaggaccccacacgtaaggatcatcgtgtgatcagcaggtgcaattagtcatc 17217163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 255
Target Start/End: Original strand, 9851002 - 9851072
Alignment:
Q  186 gaacactggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgt-ttcaattacctttga 255  Q
    ||||| || ||||||||||||||| |||| | |||||||||| |||||||| ||| |||||||||||||||    
T  9851002 gaacattgtccttcatttcctttggaaatttaggaatgccaagttaagtctatgtgttcaattacctttga 9851072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 19604818 - 19604879
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaa 78  Q
    |||||||||| || |||||||||||| |||||||| |||||| |||| ||||||||| ||||    
T  19604818 agtaagtactcaggaggtgacattactaatattgagtaaaatatgttaaacctaggaggtaa 19604879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 304
Target Start/End: Complemental strand, 5956472 - 5956374
Alignment:
Q  206 tttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaa 304  Q
    ||||||||| | |||||| |||||||||| | |||||||||||| |||||   |  ||||||||||||||||| ||| | ||| ||| | |||||||||    
T  5956472 tttgaaaatttaggaatgtcaatttaagtttatgtttcaattacttttgagggaataagaccccgcacgtaaggatcgccatgtgattagcaggtgcaa 5956374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 17672754 - 17672692
Alignment:
Q  21 agtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagt 83  Q
    ||||||||| |||||||||||| || ||||| | |||| || |||||||| ||||||||||||    
T  17672754 agtacttaggaggtgacattactaacattgagtgaaatgtgctgaacctaagatgtaactagt 17672692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 98; Significance: 3e-48; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 17 - 150
Target Start/End: Original strand, 28605499 - 28605631
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaacaagcaccaaggggaat 116  Q
    ||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||    
T  28605499 agtaagtacttaggaggtgacattactaatattgagtaaaatttgttgaacctaggatgttactagtttattaattagggaaacaaggaccaaggggaat 28605598  T
Q  117 aaacctaagtaagaccattgtcctcgacctctag 150  Q
    |||||| ||||| |||||||||||||||||||||    
T  28605599 aaacct-agtaaaaccattgtcctcgacctctag 28605631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 29850100 - 29849964
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaacaagcaccaaggggaat 116  Q
    ||||||||||||  |||||||||||| |||||||| |||||| ||||||||||| |||| |||||||||| ||||||||| |||||||||| | ||||||    
T  29850100 agtaagtacttaagaggtgacattactaatattgagtaaaatctgttgaacctacgatgcaactagtttactaattagggaaacaagcaccgatgggaat 29850001  T
Q  117 aaacctaagtaagaccattgtcctcgacctctaggtaa 154  Q
    |||||| |||||||||||| ||||||||||||||||||    
T  29850000 aaacct-agtaagaccattttcctcgacctctaggtaa 29849964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 12 - 154
Target Start/End: Complemental strand, 28766045 - 28765903
Alignment:
Q  12 ataggagtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaacaagcaccaagg 111  Q
    |||| ||||||||||||| |||||||||||| |||||||| |||||| || ||||| ||||||||||||| || | ||||||||| ||||| ||| ||||    
T  28766045 atagtagtaagtacttaggaggtgacattactaatattgagtaaaatctgatgaacttaggatgtaactacttaaataattagggaaacaaacactaagg 28765946  T
Q  112 ggaataaacctaagtaagaccattgtcctcgacctctaggtaa 154  Q
     |||||||||||||||||||||||  |||||||||||||||||    
T  28765945 agaataaacctaagtaagaccattaccctcgacctctaggtaa 28765903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 32086109 - 32085974
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaacaagcaccaaggggaat 116  Q
    ||||||||||||| |||||||||||| |||||||| |||||| ||||||||||||||||||||||| ||||||||||||  |||||||| ||||||||      
T  32086109 agtaagtacttaggaggtgacattactaatattgagtaaaatatgttgaacctaggatgtaactag-ttattaattaggaaaacaagcaacaaggggagc 32086011  T
Q  117 aaacctaagtaagaccattgtcctcgacctctaggtaa 154  Q
    |||||| |||||||||||| |||||||||| |||||||    
T  32086010 aaacct-agtaagaccattatcctcgacctttaggtaa 32085974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 197 - 313
Target Start/End: Original strand, 23933225 - 23933341
Alignment:
Q  197 ttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatc 296  Q
    |||||| |||||| ||| || |||| |||||||||||| | ||||||||||||||||||||||| ||||||||||||||||| ||||   |||||||| |    
T  23933225 ttcattgcctttggaaacctaggaacgccaatttaagtttatgtttcaattacctttgaattagaaagaccccgcacgtaaggatcatcgtgcgatcagc 23933324  T
Q  297 aggtgcaattagccatc 313  Q
    ||||||| |||||||||    
T  23933325 aggtgcagttagccatc 23933341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 217 - 313
Target Start/End: Complemental strand, 26667781 - 26667685
Alignment:
Q  217 tggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    ||||| |||||||||||| | |||||||||||||||||| |||||||||||||||||||||| |||||| ||||||||  ||||||| |||||||||    
T  26667781 tggaaagccaatttaagtttatgtttcaattacctttgagttagcaagaccccgcacgtaaggatcactgtgcgatcagtaggtgcagttagccatc 26667685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 192 - 278
Target Start/End: Original strand, 27908756 - 27908842
Alignment:
Q  192 tggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaag 278  Q
    |||||||||||||||| |||||   ||||| |||||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  27908756 tggccttcatttccttggaaaaaactggaacgccaatttaagtttatgtttcaattacctttgaattagcaagaccccgcacgtaag 27908842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 29031945 - 29031810
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaacaagcaccaaggggaat 116  Q
    ||||||||||||| |||||| ||||| | |||||| |||||| | |||||| |||||||||| ||| |||||||| |||| |||||||| |||||||| |    
T  29031945 agtaagtacttagcaggtgatattactactattgagtaaaatctattgaacataggatgtaattag-ttattaataagggaaacaagcatcaaggggagt 29031847  T
Q  117 aaacctaagtaagaccattgtcctcgacctctaggtaa 154  Q
    |||||| |||||||||||| || ||||||||| |||||    
T  29031846 aaacct-agtaagaccattatcttcgacctcttggtaa 29031810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 157 - 284
Target Start/End: Original strand, 28605704 - 28605831
Alignment:
Q  157 ctaagattcatagatgtgttgtcctacaagaacactggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttgaa 256  Q
    |||||||||||||||| | ||  ||| | ||||| | |||| |||| |||||| ||||||||||| ||||||||| |||| || ||||||||||||||||    
T  28605704 ctaagattcatagatgagctgatctataggaacatttgcctgcattacctttggaaatcttggaacgccaatttatgtctatggttcaattacctttgaa 28605803  T
Q  257 ttagcaagaccccgcacgtaagcatcac 284  Q
    |||||||| ||||||| ||||| |||||    
T  28605804 ttagcaaggccccgcatgtaaggatcac 28605831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 204 - 285
Target Start/End: Complemental strand, 13776854 - 13776773
Alignment:
Q  204 cctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcact 285  Q
    |||||| ||||||||||| |||||||||||| | |||||||||||||||||||||| ||||||||| |||||||| ||||||    
T  13776854 cctttggaaatcttggaaagccaatttaagtttatgtttcaattacctttgaattaacaagaccccacacgtaaggatcact 13776773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 161 - 278
Target Start/End: Original strand, 20174175 - 20174292
Alignment:
Q  161 gattcatagatgtgttgtcctacaagaacactggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttgaattag 260  Q
    |||||||||||| || | ||| ||  |||| ||||||||||| |||||| |||||| ||||  | ||||||| ||| |||||||||||||||||||||||    
T  20174175 gattcatagatgggtcgaccttcagaaacattggccttcattgcctttggaaatctaggaacacaaatttaattctatgtttcaattacctttgaattag 20174274  T
Q  261 caagaccccgcacgtaag 278  Q
    ||||||||| ||||||||    
T  20174275 caagaccccacacgtaag 20174292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 156 - 313
Target Start/End: Complemental strand, 29849895 - 29849738
Alignment:
Q  156 cctaagattcatagatgtgttgtcctacaagaacactggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttga 255  Q
    ||||||||||||||||| |  | | | || ||||| ||||||||||||||| || ||| || |||| | | |||||||| | ||||||||||||||||||    
T  29849895 cctaagattcatagatgggaagacattcatgaacattggccttcatttcctctggaaacctaggaacgtcgatttaagtttatgtttcaattacctttga 29849796  T
Q  256 attagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    ||| ||||||||||||||||||| || ||  |||||||| || ||| | |||||||||    
T  29849795 atttgcaagaccccgcacgtaaggattaccgtgcgatcagcaagtgtagttagccatc 29849738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 156 - 312
Target Start/End: Original strand, 25884993 - 25885149
Alignment:
Q  156 cctaagattcatagatgtgttgtcctacaagaacactggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttga 255  Q
    ||||||||||||||||| |    ||| || ||||| || |||||| | |||||| |||||| |||| | |||||||||||| |||||||||||||||| |    
T  25884993 cctaagattcatagatgggaaaaccttcaggaacattgaccttcactgcctttggaaatctaggaacgtcaatttaagtctatgtttcaattacctttaa 25885092  T
Q  256 attagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccat 312  Q
    |||||||||||||  || ||||  |||||  |||||||| |||||||| ||||||||    
T  25885093 attagcaagaccctacatgtaaagatcaccgtgcgatcaacaggtgcagttagccat 25885149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 186 - 313
Target Start/End: Original strand, 23011326 - 23011453
Alignment:
Q  186 gaacactggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcact 285  Q
    ||||| ||||||||||| |||||| |||||| |||| | ||||||||  || ||||||||||||||||||||||| || |||| ||||||| | ||||||    
T  23011326 gaacattggccttcattgcctttggaaatctaggaacgtcaatttaaccctatgtttcaattacctttgaattagaaaaaccctgcacgtatggatcact 23011425  T
Q  286 atgcgatcatcaggtgcaattagccatc 313  Q
     | |||||| ||| |||| |||||||||    
T  23011426 gttcgatcaacagatgcagttagccatc 23011453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 53 - 148
Target Start/End: Original strand, 23933016 - 23933109
Alignment:
Q  53 taaaatttgttgaacctaggatgtaactagtttattaattagggcaacaagcaccaaggggaataaacctaagtaagaccattgtcctcgacctct 148  Q
    |||||| |||||||| |||||||||||||||| ||||||||||| ||||||||||||||||| | ||||| |||||||||||| || |||||||||    
T  23933016 taaaatctgttgaacttaggatgtaactagtt-attaattagggaaacaagcaccaaggggagtgaacct-agtaagaccattatcatcgacctct 23933109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 224 - 302
Target Start/End: Original strand, 18121887 - 18121965
Alignment:
Q  224 ccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgc 302  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||| ||||| |||||| |||||| | |||||||    
T  18121887 ccaatttaagtttatgtttcaattacctttgaattagcaagaccccgcatgtaaggatcactgtgcgattagcaggtgc 18121965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 216 - 313
Target Start/End: Complemental strand, 17198342 - 17198245
Alignment:
Q  216 ttggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    |||||| |||||||||||| | |||||||||||||||||||||| |||||||||| ||||||| |||  | |||||||| || ||||| |||||||||    
T  17198342 ttggaaagccaatttaagtttatgtttcaattacctttgaattaacaagaccccgtacgtaagaatcgttgtgcgatcaacatgtgcagttagccatc 17198245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 192 - 313
Target Start/End: Complemental strand, 29143414 - 29143293
Alignment:
Q  192 tggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcga 291  Q
    |||| |||||| || | |||||| |||||| |||||||||||| | ||||||||||||||||||||||||||||| || |||||||| || ||  |||||    
T  29143414 tggctttcattgccctagaaaatattggaaagccaatttaagtttatgtttcaattacctttgaattagcaagactccacacgtaaggattaccgtgcga 29143315  T
Q  292 tcatcaggtgcaattagccatc 313  Q
    |||  ||||||  |||||||||    
T  29143314 tcagtaggtgcggttagccatc 29143293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 17 - 146
Target Start/End: Original strand, 20173962 - 20174092
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaacaagcaccaaggggaat 116  Q
    ||||||||| |||||||||||||||  |||||||| |||||| |  | ||| |||||||||||||| ||||||||||||| |||||| | |||||||| |    
T  20173962 agtaagtacatagaaggtgacattagtaatattgagtaaaatctactaaacttaggatgtaactag-ttattaattagggaaacaagtatcaaggggagt 20174060  T
Q  117 aaacc--taagtaagaccattgtcctcgacct 146  Q
     ||||  | |||||||||||| ||||||||||    
T  20174061 gaaccaattagtaagaccattctcctcgacct 20174092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 217 - 301
Target Start/End: Complemental strand, 30412104 - 30412020
Alignment:
Q  217 tggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtg 301  Q
    ||||| |||||||||||| | ||||||| ||||||||||||||||||||||||||||||||| |||||  |||| ||| ||||||    
T  30412104 tggaaagccaatttaagtttatgtttcagttacctttgaattagcaagaccccgcacgtaaggatcaccgtgcgttcagcaggtg 30412020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 23006555 - 23006633
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattaggg 96  Q
    ||||||||||||  || ||||||||| |||||||| |||||| ||||||||||||||||||||||| |||||||||||||    
T  23006555 agtaagtacttaagagttgacattactaatattgagtaaaatatgttgaacctaggatgtaactag-ttattaattaggg 23006633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 79
Target Start/End: Original strand, 11465390 - 11465452
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaac 79  Q
    ||||||||||||| |||||||||||| ||| ||||||||||||||||||||||| ||||||||    
T  11465390 agtaagtacttaggaggtgacattactaatcttgaataaaatttgttgaacctatgatgtaac 11465452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 156 - 313
Target Start/End: Original strand, 24090491 - 24090649
Alignment:
Q  156 cctaagattcatagatgtgttgtcctacaagaacactggccttcatttcctttgaaaatcttggaatgccaatttaagtctt-tgtttcaattacctttg 254  Q
    ||||||||||||||||| |  | ||||   |||||||||||||||||||||| | |||   ||||| ||  || ||| | || |||||||||||||||||    
T  24090491 cctaagattcatagatgagaagacctaagggaacactggccttcatttccttgggaaacactggaaagctgatataaattttatgtttcaattacctttg 24090590  T
Q  255 aattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    ||||||||||||||| ||| |||| |||||  |||||||| || |||||||||| ||||    
T  24090591 aattagcaagaccccacacataaggatcaccgtgcgatcagcatgtgcaattagtcatc 24090649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 223 - 313
Target Start/End: Complemental strand, 25530915 - 25530825
Alignment:
Q  223 gccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    |||||||||||| | ||| ||||||||||||||||||| |||||||||||| |||| |||||  ||||||||  ||||||| |||||||||    
T  25530915 gccaatttaagtttatgtctcaattacctttgaattagaaagaccccgcacataaggatcaccgtgcgatcagtaggtgcatttagccatc 25530825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 204 - 313
Target Start/End: Complemental strand, 29028016 - 29027907
Alignment:
Q  204 cctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgca 303  Q
    |||||| |||| | |||| |||||||||||||| |||||||||||||||| | ||| |||||||||||||||||| ||||   | | |||| ||||||||    
T  29028016 cctttggaaatttaggaacgccaatttaagtctatgtttcaattacctttaatttaacaagaccccgcacgtaaggatcatcgtacaatcagcaggtgca 29027917  T
Q  304 attagccatc 313  Q
     |||||||||    
T  29027916 gttagccatc 29027907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 29833898 - 29833763
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaacaagcaccaaggggaat 116  Q
    ||||||||||||| | |||||||||||||||||   |||||| |||||||||| |||| ||||||||||| |||||| |  || ||||  | | ||||||    
T  29833898 agtaagtacttaggaagtgacattacaaatattccttaaaatctgttgaacctgggatataactagtttagtaattaagaaaataagcttcgaagggaat 29833799  T
Q  117 aaacctaagtaagaccattgtcctcgacctctaggtaa 154  Q
    |||||| |||||| ||| ||||||| ||||||||||||    
T  29833798 aaacct-agtaaggcca-tgtcctctacctctaggtaa 29833763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 158 - 313
Target Start/End: Original strand, 17675232 - 17675387
Alignment:
Q  158 taagattcatagatgtgttgtcctacaagaacactggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttgaat 257  Q
    ||||||||||||||| | || ||||   ||||  ||||||||||| |||| | |||   | ||| |||||||||||| | |||||| |||||||||||||    
T  17675232 taagattcatagatgggctgacctaagggaaccttggccttcattgccttgggaaacactagaacgccaatttaagtttatgtttccattacctttgaat 17675331  T
Q  258 tagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    ||||||||| |||||| |||| ||||| ||| ||||| ||| |||| |||| ||||    
T  17675332 tagcaagacgccgcacctaaggatcaccatgtgatcagcagatgcagttagtcatc 17675387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 9761773 - 9761859
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaacaag 103  Q
    ||||||||||| | | |||||||||| ||||||||||||||| |||||||||||||| ||||||| || | |||||| || ||||||    
T  9761773 agtaagtacttcggatgtgacattactaatattgaataaaatctgttgaacctaggaggtaactatttaaataattaaggaaacaag 9761859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 310
Target Start/End: Complemental strand, 28929144 - 28929057
Alignment:
Q  223 gccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagcc 310  Q
    |||||||||| ||| | ||||||||||||||||||||  |||| |||| ||||||| |||||| |||||||| || ||||| ||||||    
T  28929144 gccaatttaaatctatatttcaattacctttgaattaataagatcccgtacgtaaggatcactgtgcgatcagcatgtgcagttagcc 28929057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 76 - 142
Target Start/End: Original strand, 11467371 - 11467436
Alignment:
Q  76 taactagtttattaattagggcaacaagcaccaaggggaataaacctaagtaagaccattgtcctcg 142  Q
    |||||| ||||||||||| || || ||||| |||||||||||||||| |||||||||||||||||||    
T  11467371 taactaatttattaattatggaaataagcatcaaggggaataaacct-agtaagaccattgtcctcg 11467436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 156 - 252
Target Start/End: Complemental strand, 15339809 - 15339711
Alignment:
Q  156 cctaagattcatagatgtgttgtcctacaagaacactggccttcatttcctttgaaaatcttggaatgccaat-ttaagtctttg-tttcaattacctt 252  Q
    ||||||||||||||||| || | |||||| ||||  ||||||||||| |||| ||||||||||||| |||||| | |||||| || |||||||||||||    
T  15339809 cctaagattcatagatgggtagacctacatgaaccttggccttcattgccttggaaaatcttggaaagccaatatcaagtctatgctttcaattacctt 15339711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 252
Target Start/End: Original strand, 12950586 - 12950683
Alignment:
Q  156 cctaagattcatagatgtgttgtcctacaagaacactggccttcatttcctttgaaaatcttggaatgccaatttaagtctttg-tttcaattacctt 252  Q
    ||||||||||||||||| |  | |||||||||||  ||||||||||| |||| | ||||| ||||| |||||||||||| | || |||||||||||||    
T  12950586 cctaagattcatagatgggaagacctacaagaaccttggccttcattgccttaggaaatcatggaaagccaatttaagtgtatgctttcaattacctt 12950683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 313
Target Start/End: Original strand, 17635448 - 17635533
Alignment:
Q  228 tttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    ||||||| | |||||| |||||||||||||||||||||| |||||| |||| ||||| ||| ||||| ||| |||| |||| ||||    
T  17635448 tttaagtttatgtttccattacctttgaattagcaagacgccgcacctaaggatcaccatgtgatcagcagatgcagttagtcatc 17635533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 224 - 313
Target Start/End: Complemental strand, 25535739 - 25535650
Alignment:
Q  224 ccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    ||||||||||| | ||| |||||||||||| |||||||||||||||||||||| |  |||   || ||||| |||||||| |||||||||    
T  25535739 ccaatttaagtttatgtctcaattacctttaaattagcaagaccccgcacgtacggttcaacgtgtgatcaacaggtgcagttagccatc 25535650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 313
Target Start/End: Original strand, 17743139 - 17743235
Alignment:
Q  217 tggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    |||||||||||||||| | | |||||||| ||||||||||||| ||||||| || || |||| |||    ||||||||||| ||||| |||||||||    
T  17743139 tggaatgccaatttaattttatgtttcaactacctttgaattaacaagacctcgtacataaggatcgtcgtgcgatcatcaagtgcagttagccatc 17743235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 225 - 313
Target Start/End: Original strand, 19199768 - 19199856
Alignment:
Q  225 caatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    ||||||||||   ||||||||||||||||||| || ||||||||| |||||||  |||||| || || || || |||||||||||||||    
T  19199768 caatttaagttcatgtttcaattacctttgaactaacaagaccccacacgtaaagatcactgtgtgaccagcatgtgcaattagccatc 19199856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 13777200 - 13777133
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtt 84  Q
    ||||||||||||| |||||||||||| || | ||| |||||| || ||||||||||| ||||||||||    
T  13777200 agtaagtacttaggaggtgacattactaagactgagtaaaatctgctgaacctaggaggtaactagtt 13777133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 22568359 - 22568292
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtt 84  Q
    |||||||| |||| || ||||||||| |||||||| |||||| ||||||||||| || ||||||||||    
T  22568359 agtaagtatttaggagatgacattactaatattgagtaaaatatgttgaacctacgaggtaactagtt 22568292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 294
Target Start/End: Original strand, 23006791 - 23006902
Alignment:
Q  183 caagaacactggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatc 282  Q
    |||||||| ||||||||||| ||||||||||||| ||||    ||||||| | | | ||||||||||||||||||||  ||||||| | | ||||| |||    
T  23006791 caagaacattggccttcattgcctttgaaaatctaggaacaaaaatttaattatatatttcaattacctttgaattaaaaagaccctgtatgtaaggatc 23006890  T
Q  283 actatgcgatca 294  Q
    ||  ||||||||    
T  23006891 accgtgcgatca 23006902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 25887220 - 25887286
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtt 84  Q
    ||||||||||||| |||||||||||| ||||| || | ||||||| ||||||||||| ||||||||||    
T  25887220 agtaagtacttaggaggtgacattactaatatggagt-aaatttgatgaacctaggaggtaactagtt 25887286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 31804135 - 31804202
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtt 84  Q
    |||||||||||||||||||||||||  ||||  || |||||| || ||||||||||| ||||||||||    
T  31804135 agtaagtacttagaaggtgacattaataataccgagtaaaatctgctgaacctaggaggtaactagtt 31804202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 312
Target Start/End: Original strand, 22379158 - 22379232
Alignment:
Q  238 tgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccat 312  Q
    |||||||||||||||| ||||| ||||||| |||||||||| |||||  || ||||| || ||||| ||||||||    
T  22379158 tgtttcaattacctttcaattaacaagacctcgcacgtaaggatcaccgtgtgatcaacatgtgcagttagccat 22379232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 94
Target Start/End: Original strand, 23011083 - 23011159
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattag 94  Q
    ||||||||||||| |||||||||||  |||||||| |||||| |  |||||| | ||||||||||| |||||||||||    
T  23011083 agtaagtacttaggaggtgacattaataatattgagtaaaatctcctgaaccaaagatgtaactag-ttattaattag 23011159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 25884696 - 25884792
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaacaagcaccaagggga 114  Q
    |||||||||| || |||| || |||| |||||||| |||||| |   ||||||||||||||||||| ||||||||||||| || ||| || |||||||    
T  25884696 agtaagtactcaggaggtaacgttactaatattgagtaaaatcttccgaacctaggatgtaactag-ttattaattagggaaataagtactaagggga 25884792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 114
Target Start/End: Complemental strand, 18552311 - 18552236
Alignment:
Q  38 attacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaacaagcaccaagggga 114  Q
    ||||| |||||||| |||||| || ||||||||| |||||| ||||| ||||||||| | ||||| |||||||||||    
T  18552311 attactaatattgagtaaaatctgctgaacctagaatgtaaatagtt-attaattagagaaacaaacaccaagggga 18552236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 20171962 - 20172034
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttatta 89  Q
    ||||||||||||| |||||||||||| |||||| | |||||| ||   ||||||||| |||||||||| ||||    
T  20171962 agtaagtacttaggaggtgacattactaatattaagtaaaatctgcaaaacctaggaggtaactagttaatta 20172034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 12950384 - 12950447
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaact 80  Q
    |||||||| |||| ||| |||||||| |||| ||| |||||| |||||||||||||| ||||||    
T  12950384 agtaagtatttaggaggcgacattactaatactgagtaaaatatgttgaacctaggaggtaact 12950447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 253
Target Start/End: Complemental strand, 17890501 - 17890466
Alignment:
Q  218 ggaatgccaatttaagtctttgtttcaattaccttt 253  Q
    ||||||||||||||||||| ||||||||||||||||    
T  17890501 ggaatgccaatttaagtctatgtttcaattaccttt 17890466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 20174954 - 20174887
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtt 84  Q
    ||||||||||||  |||||||||||| ||| ||   |||||| ||||||||||||||| |||||||||    
T  20174954 agtaagtacttaagaggtgacattactaattttatgtaaaatatgttgaacctaggatttaactagtt 20174887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 15340021 - 15339937
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaacaa 102  Q
    |||||||| |||| ||||||||| || |||| | | |||||| || |||||||||||||||| ||| |||||||||| || |||||    
T  15340021 agtaagtatttaggaggtgacatgactaatactaagtaaaatctgctgaacctaggatgtaaatag-ttattaattaaggaaacaa 15339937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 269
Target Start/End: Complemental strand, 25939648 - 25939583
Alignment:
Q  204 cctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttgaattagcaagacccc 269  Q
    |||||| |||| | ||||||| ||||||||| | |||||||||||||||||| | || ||||||||    
T  25939648 cctttggaaatttaggaatgctaatttaagtttatgtttcaattacctttgagtgagtaagacccc 25939583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 97; Significance: 1e-47; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 17 - 149
Target Start/End: Complemental strand, 55639 - 55507
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaacaagcaccaaggggaat 116  Q
    ||||||||||||| |||||||||||| |||||||| |||||| || |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  55639 agtaagtacttaggaggtgacattactaatattgagtaaaatctgctgaacctaggatgtaactagtttattaattagggaaacaagcaccaaggggaat 55540  T
Q  117 aaacctaagtaagaccattgtcctcgacctcta 149  Q
    | ||||| |||||||||||||||| ||||||||    
T  55539 agacctatgtaagaccattgtccttgacctcta 55507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 159 - 313
Target Start/End: Complemental strand, 55424 - 55270
Alignment:
Q  159 aagattcatagatgtgttgtcctacaagaacactggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttgaatt 258  Q
    |||||||||||||| ||||  ||||| ||| | ||||||||||| |||||| ||||||||||  |||||||| ||||| | |||||||||||||||||||    
T  55424 aagattcatagatgggttgatctacaggaatattggccttcattgcctttggaaatcttggatcgccaattttagtctatatttcaattacctttgaatt 55325  T
Q  259 agcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    |||||||||||||| ||| | |||| | ||||||||  ||||||| |||||||||    
T  55324 agcaagaccccgcatgtacggatcattgtgcgatcagaaggtgcagttagccatc 55270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 93; Significance: 3e-45; HSPs: 69)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 17 - 153
Target Start/End: Complemental strand, 7319092 - 7318957
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaacaagcaccaaggggaat 116  Q
    ||||||||||||| || ||||||||| |||||||| |||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  7319092 agtaagtacttaggagttgacattactaatattgagtaaaatatgttgaacctaggatgtaactagtgtattaattagggaaacaagcaccaaggggaat 7318993  T
Q  117 aaacctaagtaagaccattgtcctcgacctctaggta 153  Q
    |||||| ||||||| ||||||||||||||||| ||||    
T  7318992 aaacct-agtaagaacattgtcctcgacctcttggta 7318957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 4987278 - 4987142
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaacaagcaccaaggggaat 116  Q
    ||||||||||||| |||||||||||| |||||||| |||||| |||||| |||| ||||||||||||||||||||||| | |||||| ||||||| ||||    
T  4987278 agtaagtacttaggaggtgacattactaatattgagtaaaatatgttgatcctaagatgtaactagtttattaattagagaaacaagaaccaaggagaat 4987179  T
Q  117 aaacctaagtaagaccattgtcctcgacctctaggtaa 154  Q
    |||||| || ||||||||||||||||||||||||||||    
T  4987178 aaacct-agcaagaccattgtcctcgacctctaggtaa 4987142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 4991376 - 4991240
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaacaagcaccaaggggaat 116  Q
    ||||||||||||| |||||||||||| |||||||| |||||| |||||| |||| ||||||||||||||||||||||| | |||||| ||||||| ||||    
T  4991376 agtaagtacttaggaggtgacattactaatattgagtaaaatatgttgatcctaagatgtaactagtttattaattagagaaacaagaaccaaggagaat 4991277  T
Q  117 aaacctaagtaagaccattgtcctcgacctctaggtaa 154  Q
    |||||| || ||||||||||||||||||||||||||||    
T  4991276 aaacct-agcaagaccattgtcctcgacctctaggtaa 4991240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 17 - 154
Target Start/End: Original strand, 10586263 - 10586399
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaacaagcaccaaggggaat 116  Q
    |||||||| |||| |||||||||||| |||||| | |||||| || |||||||| || |||||||||||||||||||||| || ||||||||||| ||||    
T  10586263 agtaagtatttaggaggtgacattactaatatttagtaaaatctgatgaacctatgacgtaactagtttattaattagggaaagaagcaccaaggagaat 10586362  T
Q  117 aaacctaagtaagaccattgtcctcgacctctaggtaa 154  Q
    |||||| |||||||||||||||||||||||||| ||||    
T  10586363 aaacct-agtaagaccattgtcctcgacctctaagtaa 10586399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 17 - 154
Target Start/End: Original strand, 3190388 - 3190523
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaacaagcaccaaggggaat 116  Q
    ||||||||||||| |||||||||||| |||||||| |||||| |||||||| || ||||||||||| ||||||||||||| ||||||||||||||||| |    
T  3190388 agtaagtacttaggaggtgacattactaatattgagtaaaatatgttgaacatatgatgtaactag-ttattaattagggaaacaagcaccaaggggagt 3190486  T
Q  117 aaacctaagtaagaccattgtcctcgacctctaggtaa 154  Q
     ||||| ||| ||||||||| ||||||||||| |||||    
T  3190487 gaacct-agtgagaccattggcctcgacctcttggtaa 3190523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 15870364 - 15870232
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaacaagcaccaaggggaat 116  Q
    |||||||| |||| |||||||||||| |||||||| |||||| ||||||||||||||||||| ||||||||||||||||| ||||||||| ||| ||||     
T  15870364 agtaagtatttaggaggtgacattactaatattgagtaaaatatgttgaacctaggatgtaattagtttattaattagggaaacaagcactaagcggaa- 15870266  T
Q  117 aaacctaagtaagaccattgtcctcgacctctaggtaa 154  Q
        ||||||||||||| |||||||||||| |||||||    
T  15870265 ----ctaagtaagaccactgtcctcgacctataggtaa 15870232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 153
Target Start/End: Original strand, 17152387 - 17152522
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaacaagcaccaaggggaat 116  Q
    ||||||||||||| ||||||||| || |||||||| |||| | ||||||||||| ||||||||||||||||||||||| | |||||||||| ||||||||    
T  17152387 agtaagtacttaggaggtgacatcactaatattgagtaaattctgttgaacctatgatgtaactagtttattaattagagaaacaagcacctaggggaat 17152486  T
Q  117 aaacctaagtaagaccattgtcctcgacctctaggta 153  Q
    ||||||  |||| |||||| |||| ||||||||||||    
T  17152487 aaacct-tgtaaaaccattctccttgacctctaggta 17152522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 3735369 - 3735230
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaacaagcaccaaggg---- 112  Q
    |||| |||||||| |||||||||||| |||| ||| |||||||||||||||||||||||||||| | ||||||||||||| |||||||||||||||        
T  3735369 agtaggtacttaggaggtgacattactaatactgattaaaatttgttgaacctaggatgtaact-ggttattaattagggaaacaagcaccaagggaagt 3735271  T
Q  113 gaataaacctaagtaagaccattgtcctcgacctctaggtaa 154  Q
    ||| || ||| |||||||||||| |||||||||||| |||||    
T  3735270 gaacaatcct-agtaagaccattctcctcgacctcttggtaa 3735230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 17 - 148
Target Start/End: Original strand, 8312877 - 8313006
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaacaagcaccaaggggaat 116  Q
    |||||||| |||| ||| |||||||| |||| | | |||||||||||||||||| ||||||||||| ||||||||||||  ||||||||||||||||| |    
T  8312877 agtaagtagttaggaggagacattactaatacttactaaaatttgttgaacctaagatgtaactag-ttattaattaggaaaacaagcaccaaggggagt 8312975  T
Q  117 aaacctaagtaagaccattgtcctcgacctct 148  Q
     ||||| |||||||||||| ||||||||||||    
T  8312976 gaacct-agtaagaccattatcctcgacctct 8313006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 217 - 313
Target Start/End: Original strand, 8978596 - 8978692
Alignment:
Q  217 tggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    ||||| |||||||||||| | |||||||| || ||||||||||||||||||||||||||||| |||||  |||||||| ||||||||||||||||||    
T  8978596 tggaacgccaatttaagtttatgtttcaagtaactttgaattagcaagaccccgcacgtaaggatcaccgtgcgatcagcaggtgcaattagccatc 8978692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 187 - 309
Target Start/End: Complemental strand, 3735132 - 3735010
Alignment:
Q  187 aacactggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcacta 286  Q
    |||| ||||||||||| |||||| ||| || ||||  ||||||||||| | |||||||||||||||||| |||||||||||| ||||||||| |||||      
T  3735132 aacattggccttcattgcctttgtaaacctaggaactccaatttaagtttatgtttcaattacctttgagttagcaagaccctgcacgtaaggatcaccg 3735033  T
Q  287 tgcgatcatcaggtgcaattagc 309  Q
    |||||||| |||||||| |||||    
T  3735032 tgcgatcagcaggtgcagttagc 3735010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 192 - 312
Target Start/End: Complemental strand, 11803532 - 11803412
Alignment:
Q  192 tggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcga 291  Q
    ||||||||||| |||| | |||   ||||| |||||||||||| | | ||||||||||||||||||||| ||||||||||||||||| |||||  |||||    
T  11803532 tggccttcattgccttgggaaacactggaaagccaatttaagtttatatttcaattacctttgaattagaaagaccccgcacgtaaggatcaccgtgcga 11803433  T
Q  292 tcatcaggtgcaattagccat 312  Q
    ||| || ||||||||||||||    
T  11803432 tcagcaagtgcaattagccat 11803412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 156 - 283
Target Start/End: Complemental strand, 9574960 - 9574833
Alignment:
Q  156 cctaagattcatagatgtgttgtcctacaagaacactggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttga 255  Q
    ||||||||||||||||| |  | ||| | |||||| ||||||||||| |||||| ||| || |||| | |||||||||| | |||||||| |||||||||    
T  9574960 cctaagattcatagatgggaagaccttcgagaacattggccttcattgcctttggaaacctaggaacgacaatttaagtttatgtttcaactacctttga 9574861  T
Q  256 attagcaagaccccgcacgtaagcatca 283  Q
    |||||||||||||||||| |||| ||||    
T  9574860 attagcaagaccccgcacataaggatca 9574833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 192 - 313
Target Start/End: Complemental strand, 8877885 - 8877764
Alignment:
Q  192 tggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcga 291  Q
    |||||||||||||||| | |||   ||||| |||||||||||| | ||||||||||||||||||||||  |||||||| |||||||| |||||  ||||     
T  8877885 tggccttcatttccttgggaaacactggaaggccaatttaagtttatgtttcaattacctttgaattaataagaccccacacgtaaggatcaccgtgcgg 8877786  T
Q  292 tcatcaggtgcaattagccatc 313  Q
    |||||||||| | |||||||||    
T  8877785 tcatcaggtgtagttagccatc 8877764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 196 - 283
Target Start/End: Complemental strand, 6014118 - 6014031
Alignment:
Q  196 cttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatca 283  Q
    |||||||||||||| |||||  ||||||||||||||||| | |||||||||||||||| |||||| ||||||||||| ||||| ||||    
T  6014118 cttcatttcctttggaaatccaggaatgccaatttaagtatatgtttcaattacctttaaattagaaagaccccgcatgtaaggatca 6014031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 211 - 313
Target Start/End: Complemental strand, 15870109 - 15870006
Alignment:
Q  211 aaatcttggaatgccaatttaagtctttgttt-caattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagc 309  Q
    |||||||||||  ||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||| |||||  | ||||||  |||| ||||||||    
T  15870109 aaatcttggaactccaatttaagtctatgttttcaattacctttgaattagcaagactccgcacgtaaggatcaccgtacgatcaataggtacaattagc 15870010  T
Q  310 catc 313  Q
    ||||    
T  15870009 catc 15870006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 225 - 310
Target Start/End: Complemental strand, 20582687 - 20582602
Alignment:
Q  225 caatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagcc 310  Q
    |||||||||| | ||||||||||||||||||||||||||||||| ||| ||||| |||||  |||||||| |||||||| ||||||    
T  20582687 caatttaagtttatgtttcaattacctttgaattagcaagacccggcatgtaaggatcaccgtgcgatcagcaggtgcagttagcc 20582602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 217 - 313
Target Start/End: Original strand, 13289039 - 13289135
Alignment:
Q  217 tggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    ||||| |||||||||||| | |||||||||||||||| |||||||||||||||||||||||| ||||   |||||||| || ||||| ||| |||||    
T  13289039 tggaaagccaatttaagtttatgtttcaattacctttaaattagcaagaccccgcacgtaaggatcatcgtgcgatcaacatgtgcagttaaccatc 13289135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 225 - 313
Target Start/End: Original strand, 16058635 - 16058723
Alignment:
Q  225 caatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    |||||||||| | | ||||||||||||||||||||| |||||||||||||||||  ||||  |||||||| |||||||| |||||||||    
T  16058635 caatttaagtttatttttcaattacctttgaattagtaagaccccgcacgtaagggtcaccgtgcgatcagcaggtgcagttagccatc 16058723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 226 - 313
Target Start/End: Original strand, 17190838 - 17190925
Alignment:
Q  226 aatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    ||||||||| | ||||||||||||||||||||||||||||||| ||||||| | |||||  ||||||||  ||||||| |||||||||    
T  17190838 aatttaagtttatgtttcaattacctttgaattagcaagaccctgcacgtagggatcaccgtgcgatcaataggtgcagttagccatc 17190925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 232 - 294
Target Start/End: Complemental strand, 4987001 - 4986939
Alignment:
Q  232 agtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatca 294  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||    
T  4987001 agtctatgtttcaattacctttgaattagcaagaccccgcacgtaaggatcaccgtgcgatca 4986939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 232 - 294
Target Start/End: Complemental strand, 4991099 - 4991037
Alignment:
Q  232 agtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatca 294  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||    
T  4991099 agtctatgtttcaattacctttgaattagcaagaccccgcacgtaaggatcaccgtgcgatca 4991037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 7397916 - 7397850
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagt 83  Q
    |||||| |||||| |||||||||||| |||||||| |||||| ||||||||||||||||||||||||    
T  7397916 agtaagaacttaggaggtgacattactaatattgagtaaaatctgttgaacctaggatgtaactagt 7397850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 224 - 309
Target Start/End: Original strand, 17152749 - 17152834
Alignment:
Q  224 ccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagc 309  Q
    ||||||||||| | |||||||||||| ||||||||||  |||||||||||||||| |||||  |||||||| |||||||| |||||    
T  17152749 ccaatttaagtttatgtttcaattacatttgaattagttagaccccgcacgtaaggatcaccgtgcgatcagcaggtgcagttagc 17152834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 154
Target Start/End: Original strand, 18202538 - 18202673
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaacaagcaccaaggggaat 116  Q
    ||||||||||||| |||||||||||  |||| ||| |||||| || | |||||| ||||||||||| ||||||||||  | ||||| ||||||||||| |    
T  18202538 agtaagtacttaggaggtgacattattaatactgagtaaaatctgctaaacctatgatgtaactag-ttattaattacagaaacaatcaccaaggggagt 18202636  T
Q  117 aaacctaagtaagaccattgtcctcgacctctaggtaa 154  Q
     ||||| |||||| || || |||||||||||| |||||    
T  18202637 gaacct-agtaagccctttatcctcgacctcttggtaa 18202673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 238 - 310
Target Start/End: Original strand, 39272787 - 39272859
Alignment:
Q  238 tgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagcc 310  Q
    ||||||||||||| |||||||| |||||||||||||||||| ||||| ||| ||||| |||||||| ||||||    
T  39272787 tgtttcaattaccattgaattaacaagaccccgcacgtaaggatcaccatgtgatcaacaggtgcagttagcc 39272859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 294
Target Start/End: Original strand, 18368661 - 18368716
Alignment:
Q  239 gtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatca 294  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||    
T  18368661 gtttcaattacctttgaattagcaagaccctgcacgtaaggatcaccatgcgatca 18368716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 18 - 103
Target Start/End: Complemental strand, 6014342 - 6014258
Alignment:
Q  18 gtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaacaag 103  Q
    ||||||| |||| ||||||| |||| |||||||| |||||| | ||||| ||||||||||||||| ||||||||||||| ||||||    
T  6014342 gtaagtagttaggaggtgaccttacgaatattgagtaaaatcttttgaagctaggatgtaactag-ttattaattagggaaacaag 6014258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 19 - 124
Target Start/End: Complemental strand, 9313181 - 9313077
Alignment:
Q  19 taagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaacaagcaccaaggggaataa 118  Q
    |||||| |||| |||||||||||| |||| ||| |||||| || |||||||| ||||||||||| ||||||||||||| || ||  |||||||||| | |    
T  9313181 taagtatttaggaggtgacattactaatactgagtaaaatctgctgaacctaagatgtaactag-ttattaattagggaaataaataccaaggggagtga 9313083  T
Q  119 acctaa 124  Q
    ||||||    
T  9313082 acctaa 9313077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 18 - 123
Target Start/End: Complemental strand, 9575164 - 9575059
Alignment:
Q  18 gtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaacaagcaccaaggggaata 117  Q
    |||||||||||| | |||||||||| |||| ||| |||| | | |||||||||||||||| ||| ||  |||||||||| ||||||||| ||||||| |     
T  9575164 gtaagtacttaggaagtgacattactaatactgagtaaattctattgaacctaggatgtagctaattatttaattagggaaacaagcactaaggggagtg 9575065  T
Q  118 aaccta 123  Q
    ||||||    
T  9575064 aaccta 9575059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 1586504 - 1586404
Alignment:
Q  183 caagaacactggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatc 282  Q
    |||||||| ||||||||||| || ||| ||| || ||||   |||||||||||| ||||||||||||||||| |||| ||| | |||||||||||| |||    
T  1586504 caagaacattggccttcattgcccttggaaacctaggaacatcaatttaagtctatgtttcaattacctttggattaacaaaatcccgcacgtaaggatc 1586405  T
Q  283 a 283  Q
    |    
T  1586404 a 1586404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 313
Target Start/End: Original strand, 8053730 - 8053818
Alignment:
Q  225 caatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    |||||||||| | ||||||||||||||||||||| | ||||||||||||||||| |||||  || |||||  ||||||| ||| |||||    
T  8053730 caatttaagtttatgtttcaattacctttgaattggtaagaccccgcacgtaaggatcacagtgtgatcagtaggtgcagttacccatc 8053818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 224 - 312
Target Start/End: Original strand, 10586625 - 10586713
Alignment:
Q  224 ccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccat 312  Q
    ||||||||||| | |||||||||||||||||||||||||| |||||||| ||||| ||||   |||||||| || ||||| | ||||||    
T  10586625 ccaatttaagtttatgtttcaattacctttgaattagcaaaaccccgcatgtaaggatcatcgtgcgatcaacatgtgcagtaagccat 10586713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 83
Target Start/End: Complemental strand, 17830352 - 17830280
Alignment:
Q  11 cataggagtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagt 83  Q
    ||||| ||||||||||||  |||||| ||||| |||||||| |||||| |||||||||| |||||||||||||    
T  17830352 catagtagtaagtacttaagaggtgatattactaatattgagtaaaatatgttgaaccttggatgtaactagt 17830280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 18663199 - 18663124
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaatta 93  Q
    ||||| ||||||| |||||||||||| |||||||| |||| | |||||||| |||||||||||||| ||||||||||    
T  18663199 agtaaatacttaggaggtgacattactaatattgagtaaagtctgttgaacataggatgtaactag-ttattaatta 18663124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 4819624 - 4819557
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtt 84  Q
    |||||||||| || |||||||||||| |||||||| ||||||||| | ||||||||| ||||||||||    
T  4819624 agtaagtactaaggaggtgacattactaatattgagtaaaatttgctaaacctaggaggtaactagtt 4819557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 13277951 - 13277880
Alignment:
Q  242 tcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    ||||||||||||||||||||||||||||||||||||| |||||  || |||||  ||||||| ||| |||||    
T  13277951 tcaattacctttgaattagcaagaccccgcacgtaaggatcaccgtgtgatcagtaggtgcagttaaccatc 13277880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 19153992 - 19153925
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtt 84  Q
    ||||||||||||| |||||| ||||| |||||||| ||||||||| ||||||||||| |||| |||||    
T  19153992 agtaagtacttaggaggtgaaattactaatattgagtaaaatttgctgaacctaggaggtaagtagtt 19153925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 20753391 - 20753324
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtt 84  Q
    ||||||||||||| |||||| ||||| |||||||| ||||||||| ||||||||||| |||| |||||    
T  20753391 agtaagtacttaggaggtgaaattactaatattgagtaaaatttgctgaacctaggaggtaagtagtt 20753324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 21233232 - 21233165
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtt 84  Q
    ||||||||||||| ||||||||| || |||||||| ||||||||| ||||  ||||||||||||||||    
T  21233232 agtaagtacttaggaggtgacataactaatattgagtaaaatttgctgaaagtaggatgtaactagtt 21233165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 9730937 - 9731003
Alignment:
Q  18 gtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtt 84  Q
    |||||||||||| |||||||||||| |||||||| |||||| || ||| ||||||| ||||||||||    
T  9730937 gtaagtacttaggaggtgacattactaatattgagtaaaatctgctgagcctaggaggtaactagtt 9731003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 224 - 313
Target Start/End: Original strand, 2574280 - 2574369
Alignment:
Q  224 ccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    ||||||||||||  || ||||||||||||||||||| ||||||||||||| |||| |||||   ||||| | |||||||  |||||||||    
T  2574280 ccaatttaagtccatgcttcaattacctttgaattaacaagaccccgcacataaggatcaccgcgcgattagcaggtgctgttagccatc 2574369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 124
Target Start/End: Original strand, 9257072 - 9257176
Alignment:
Q  19 taagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaacaagcaccaaggggaataa 118  Q
    |||||| |||| |||||||||||| | || ||| |||||| || |||||||| ||||||||||| ||||||||||||| || ||  |||||||||| | |    
T  9257072 taagtatttaggaggtgacattactagtactgagtaaaatctgctgaacctaagatgtaactag-ttattaattagggaaataaataccaaggggagtga 9257170  T
Q  119 acctaa 124  Q
    ||||||    
T  9257171 acctaa 9257176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 284
Target Start/End: Original strand, 16297372 - 16297501
Alignment:
Q  156 cctaagattcatagatgtgttgtcctacaagaacactggccttcatttcctttgaaaatcttggaatgccaattta-agtctttgtttcaattacctttg 254  Q
    ||||||||||||||||| |   ||||  | ||||| ||||||||||| |||||| |||| | ||||||||||| || || |||||||||||||| |||||    
T  16297372 cctaagattcatagatgggaaatcctttaggaacattggccttcattgcctttggaaatttaggaatgccaatatatagcctttgtttcaattaactttg 16297471  T
Q  255 aattagcaagaccccgcacgtaagcatcac 284  Q
    |  ||| |||| ||| |||||||| |||||    
T  16297472 aggtagtaagatcccacacgtaaggatcac 16297501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 224 - 313
Target Start/End: Complemental strand, 17077541 - 17077452
Alignment:
Q  224 ccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    ||||||||||| | ||||||||||||| ||||||||||||||||| ||| ||||| |||||  | |||||  ||||| || |||||||||    
T  17077541 ccaatttaagtttatgtttcaattaccgttgaattagcaagaccctgcatgtaaggatcaccgtacgatcgacaggttcagttagccatc 17077452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 312
Target Start/End: Original strand, 18202809 - 18202897
Alignment:
Q  223 gccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccat 312  Q
    |||||||||||| | |||||||||||||||| ||||||||| |  | ||||||||| |||||| |||||||| ||| |||| ||||||||    
T  18202809 gccaatttaagtttatgtttcaattacctttaaattagcaaca-tctgcacgtaaggatcactgtgcgatcagcagatgcagttagccat 18202897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 192 - 304
Target Start/End: Original strand, 1847879 - 1847991
Alignment:
Q  192 tggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcga 291  Q
    ||||||||||| |||| |||||   | ||| | |||||||| | | |||||||||||||||| || |||||||||| |||||||||| |||||| ||||     
T  1847879 tggccttcattgccttggaaaaaactagaacgacaatttaattttatgtttcaattacctttaaaatagcaagacctcgcacgtaaggatcactgtgcgg 1847978  T
Q  292 tcatcaggtgcaa 304  Q
    ||| || ||||||    
T  1847979 tcaacacgtgcaa 1847991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 4786580 - 4786524
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctagga 73  Q
    |||||||||| || |||||||||||| |||||||| ||||||||| |||||||||||    
T  4786580 agtaagtactaaggaggtgacattactaatattgagtaaaatttgctgaacctagga 4786524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 6006537 - 6006469
Alignment:
Q  187 aacactggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttga 255  Q
    |||| ||||||||||| |||||| | || | |||||||||||||||||||  |||||||||||||||||    
T  6006537 aacattggccttcattgcctttggacatttaggaatgccaatttaagtctacgtttcaattacctttga 6006469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 12 - 105
Target Start/End: Original strand, 13759284 - 13759378
Alignment:
Q  12 ataggagtaagtacttagaaggtgacattacaaatattgaata--aaatttgttgaacctaggatgtaactagtttattaattagggcaacaagca 105  Q
    |||| ||||||||||||| |||||||||||| |||||||| ||  || | || ||||||||||||||||| || ||| ||||||||| ||||||||    
T  13759284 atagtagtaagtacttaggaggtgacattactaatattgagtagtaactctgctgaacctaggatgtaac-aggttagtaattagggaaacaagca 13759378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 10941807 - 10941874
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtt 84  Q
    ||||||||||||| |||||| |||||  ||||||| |||||| ||||||||| |||| ||||||||||    
T  10941807 agtaagtacttaggaggtgatattactgatattgagtaaaatctgttgaaccaaggaggtaactagtt 10941874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 1588294 - 1588209
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaacaag 103  Q
    ||||||||||| | |||||||||||  |||||| | |||||| |||||||| |||||||||| ||| |||||||| |||| ||||||    
T  1588294 agtaagtactttgcaggtgacattagtaatattaagtaaaatatgttgaacataggatgtaattag-ttattaatcagggaaacaag 1588209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 313
Target Start/End: Original strand, 13759564 - 13759654
Alignment:
Q  223 gccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    |||||||||||| | |||||||||||||||| ||||| |||||||  |||||| |  |||||| |||||||| || ||| | |||||||||    
T  13759564 gccaatttaagtttatgtttcaattacctttcaattaacaagaccttgcacgtcaagatcactgtgcgatcaacatgtgtagttagccatc 13759654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 31493684 - 31493599
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaacaag 103  Q
    ||||||||||||  |||| | ||||| |||||||| |||||||| |||||| |||| ||||||||| |||||||||| || ||||||    
T  31493684 agtaagtacttaagaggtaatattactaatattgagtaaaatttattgaacataggttgtaactag-ttattaattaaggaaacaag 31493599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 240 - 313
Target Start/End: Complemental strand, 13418938 - 13418865
Alignment:
Q  240 tttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    |||||||||||||||||||| ||||||| ||||| |||| ||| |  |||||||| |||||| | |||||||||    
T  13418938 tttcaattacctttgaattaccaagacctcgcacataaggatctccgtgcgatcagcaggtgaagttagccatc 13418865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 231 - 284
Target Start/End: Original strand, 22066875 - 22066928
Alignment:
Q  231 aagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcac 284  Q
    |||||| ||| ||||||||||||||||||||||||| || |||||||| |||||    
T  22066875 aagtctatgtctcaattacctttgaattagcaagacgccacacgtaaggatcac 22066928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 4449418 - 4449378
Alignment:
Q  238 tgtttcaattacctttgaattagcaagaccccgcacgtaag 278  Q
    |||||||||||||||| ||||||||||||||| ||||||||    
T  4449418 tgtttcaattacctttaaattagcaagaccccacacgtaag 4449378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 9131576 - 9131512
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaacta 81  Q
    ||||||||||||| |||||||||||| |||||||| |||||| |  |||| |||||| |||||||    
T  9131576 agtaagtacttaggaggtgacattactaatattgagtaaaatctactgaatctaggaggtaacta 9131512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 22338741 - 22338805
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaacta 81  Q
    ||||||||||||| ||||||||| || ||||||||||||||| |   ||| ||||||||||||||    
T  22338741 agtaagtacttaggaggtgacatgactaatattgaataaaatcttcagaaactaggatgtaacta 22338805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 186 - 285
Target Start/End: Complemental strand, 1588069 - 1587970
Alignment:
Q  186 gaacactggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcact 285  Q
    ||||||||| ||||||| || ||| |||  | |||| | |||||||||| | ||||| | |||||||||||||||  ||||||| |||||||| ||||||    
T  1588069 gaacactggacttcattgccattggaaaattaggaacgtcaatttaagtttatgttttagttacctttgaattagacagaccccacacgtaaggatcact 1587970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 247 - 313
Target Start/End: Complemental strand, 7318751 - 7318684
Alignment:
Q  247 tacctttgaattagcaagaccccgcacgtaa-gcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    |||||||||||||||||| |||||||||||| | |||||  |||||||| |||||||| |||| ||||    
T  7318751 tacctttgaattagcaagtccccgcacgtaagggatcaccgtgcgatcagcaggtgcagttagtcatc 7318684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 255
Target Start/End: Complemental strand, 17830105 - 17830035
Alignment:
Q  186 gaacactggccttcatttcctttgaaaatcttggaatgccaatttaa-gtctttgtttcaattacctttga 255  Q
    ||||| || |||||||| |||||| |||| | ||||||||||| ||| |||| ||||||||||||||||||    
T  17830105 gaacattgaccttcattgcctttggaaatttaggaatgccaatataaagtctatgtttcaattacctttga 17830035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 269
Target Start/End: Complemental strand, 1585044 - 1584991
Alignment:
Q  216 ttggaatgccaatttaagtctttgtttcaattacctttgaattagcaagacccc 269  Q
    |||||| |||||||||||||  || ||| ||||||||||||||| |||||||||    
T  1585044 ttggaaggccaatttaagtccatgcttccattacctttgaattaacaagacccc 1584991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 268
Target Start/End: Complemental strand, 5107140 - 5107095
Alignment:
Q  223 gccaatttaagtctttgtttcaattacctttgaattagcaagaccc 268  Q
    |||||||||||||  || ||||||||||||||||||| ||||||||    
T  5107140 gccaatttaagtccatgcttcaattacctttgaattaacaagaccc 5107095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 6006770 - 6006706
Alignment:
Q  19 taagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtt 84  Q
    ||||||||||  |||||||||||| |||||| | |||||| |||| ||||| ||||||||||||||    
T  6006770 taagtacttatgaggtgacattactaatattaagtaaaatctgttaaacct-ggatgtaactagtt 6006706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 21502017 - 21501953
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtt 84  Q
    ||||||||| ||||||||||||||||   |||||| ||||||||  |||| | |||||||||||||||    
T  21502017 agtaagtacatagaaggtgacattac---tattgagtaaaatttactgaaaccaggatgtaactagtt 21501953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 270
Target Start/End: Complemental strand, 1861375 - 1861343
Alignment:
Q  238 tgtttcaattacctttgaattagcaagaccccg 270  Q
    |||||||||||||||||||| ||||||||||||    
T  1861375 tgtttcaattacctttgaatcagcaagaccccg 1861343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 228
Target Start/End: Complemental strand, 4819411 - 4819339
Alignment:
Q  156 cctaagattcatagatgtgttgtcctacaagaacactggccttcatttcctttgaaaatcttggaatgccaat 228  Q
    ||||||||||||||||| || | |||||||||||  |||||||||||  ||| | ||||| ||||| ||||||    
T  4819411 cctaagattcatagatgggtagacctacaagaaccttggccttcattgtcttaggaaatcgtggaaagccaat 4819339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 284
Target Start/End: Original strand, 22339010 - 22339070
Alignment:
Q  224 ccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcac 284  Q
    ||||||||||||| ||||||||||||| ||||   || |||||||| |||||||| |||||    
T  22339010 ccaatttaagtctatgtttcaattacccttgagggagtaagaccccacacgtaaggatcac 22339070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 92; Significance: 1e-44; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 19 - 154
Target Start/End: Original strand, 6630018 - 6630153
Alignment:
Q  19 taagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaacaagcaccaaggggaataa 118  Q
    ||||||||||| |||||||||||| |||||||| |||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  6630018 taagtacttaggaggtgacattactaatattgagtaaaatctattgaacctaggatgtaactagtttattaattagggaaacaagcaccaaggggtataa 6630117  T
Q  119 acctaagtaagaccattgtcctcgacctctaggtaa 154  Q
    |||||| ||||| ||||||||| | |||||||||||    
T  6630118 acctaattaagaacattgtccttggcctctaggtaa 6630153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 187 - 313
Target Start/End: Complemental strand, 11177470 - 11177344
Alignment:
Q  187 aacactggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcacta 286  Q
    |||| ||||||||||| |||||| ||| | |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| ||||||     
T  11177470 aacattggccttcattgcctttggaaaacctggaatgccaatttaagtatatgtttcaattacctttgaattagcaagaccccgcacgtaaggatcactg 11177371  T
Q  287 tgcgatcatcaggtgcaattagccatc 313  Q
    ||||||| ||| ||||| |||||||||    
T  11177370 tgcgatcgtcaagtgcagttagccatc 11177344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 156 - 312
Target Start/End: Original strand, 6630222 - 6630378
Alignment:
Q  156 cctaagattcatagatgtgttgtcctacaagaacactggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttga 255  Q
    |||| |||||||||||| | || |||||||||||| || |||||||| ||||||  |||||||||| | |||||||||| | |||||||||||||||| |    
T  6630222 cctatgattcatagatgagctgacctacaagaacattgtccttcattgcctttgggaatcttggaacgtcaatttaagtttatgtttcaattacctttaa 6630321  T
Q  256 attagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccat 312  Q
    ||||||||||| |||||| |||| |||| | |||||||| |||||||||||||||||    
T  6630322 attagcaagactccgcacataaggatcattgtgcgatcagcaggtgcaattagccat 6630378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 11177707 - 11177570
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaacaagcaccaaggggaat 116  Q
    |||| |||||||| | |||||||||  |||||||| |||||| |||||||||| ||||||| |||||||| ||||||||| ||||| ||||||| | |||    
T  11177707 agtaggtacttaggatgtgacattattaatattgagtaaaatatgttgaacctcggatgtagctagtttagtaattagggaaacaaacaccaagagaaat 11177608  T
Q  117 aaacctaagtaagaccattgtcctcgacctctaggtaa 154  Q
    |||||||| ||| |||||||||| ||||||||||||||    
T  11177607 aaacctaaataaaaccattgtccccgacctctaggtaa 11177570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 186 - 313
Target Start/End: Complemental strand, 15466902 - 15466775
Alignment:
Q  186 gaacactggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcact 285  Q
    ||||| || ||||||||||||||| |||||| ||||  ||||||||||||  |||||||||||| ||||||||| |||||||||||||||||| ||| |     
T  15466902 gaacattgaccttcatttcctttggaaatctaggaacaccaatttaagtcaatgtttcaattacatttgaattaccaagaccccgcacgtaaggatcgcc 15466803  T
Q  286 atgcgatcatcaggtgcaattagccatc 313  Q
     |||||||| |||||||| |||| ||||    
T  15466802 gtgcgatcagcaggtgcatttagacatc 15466775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 186 - 313
Target Start/End: Original strand, 21688413 - 21688540
Alignment:
Q  186 gaacactggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcact 285  Q
    ||||| ||||||||||||||||||  ||| | |||| |  ||||||||||| |||||||||||||||||||||||||||||   |||||||||||||||     
T  21688413 gaacattggccttcatttcctttggcaatataggaacgataatttaagtctatgtttcaattacctttgaattagcaagacgatgcacgtaagcatcacc 21688512  T
Q  286 atgcgatcatcaggtgcaattagccatc 313  Q
     |||||||| ||||| ||  ||||||||    
T  21688513 gtgcgatcagcaggtccagctagccatc 21688540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 19245345 - 19245210
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaacaagcaccaaggggaat 116  Q
    ||||||||||||| | |||||||||| |||||||| |||||| |||| || |||| |||||||||| |||||||| || | ||||| ||||| ||||| |    
T  19245345 agtaagtacttaggaagtgacattactaatattgagtaaaatctgtttaaactagaatgtaactag-ttattaataagagaaacaaacaccagggggagt 19245247  T
Q  117 aaacctaagtaagaccattgtcctcgacctctaggtaa 154  Q
     ||||||| ||||||||||||||||||| ||| |||||    
T  19245246 gaacctaa-taagaccattgtcctcgacttcttggtaa 19245210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 225 - 313
Target Start/End: Complemental strand, 21907934 - 21907846
Alignment:
Q  225 caatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    |||||||||||| |||||||||||| |||||||||| ||||||| ||||||||| |||||  ||||||||||| ||||| |||||||||    
T  21907934 caatttaagtctatgtttcaattacttttgaattagtaagaccctgcacgtaaggatcaccgtgcgatcatcatgtgcacttagccatc 21907846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 186 - 313
Target Start/End: Complemental strand, 19245113 - 19244986
Alignment:
Q  186 gaacactggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcact 285  Q
    ||||||||||||||||| |||||||||  || |||| |||||||||||| | ||||||||||||| ||||||| | |||||||||||| |||| ||||      
T  19245113 gaacactggccttcattacctttgaaagcctaggaacgccaatttaagtttatgtttcaattacccttgaattggtaagaccccgcacataaggatcatc 19245014  T
Q  286 atgcgatcatcaggtgcaattagccatc 313  Q
     |||||||| || ||||| |||| ||||    
T  19245013 gtgcgatcaacatgtgcagttagtcatc 19244986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 158 - 313
Target Start/End: Complemental strand, 22568404 - 22568250
Alignment:
Q  158 taagattcatagatgtgttgtcctacaagaacactggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttgaat 257  Q
    ||||||||||||||| |  | ||| |||||| | |||||||||||||||||| ||| || ||||| ||||||||||| | ||||||||||||||||||||    
T  22568404 taagattcatagatgggaagaccttcaagaatattggccttcatttcctttggaaacctaggaataccaatttaagtttatgtttcaattacctttgaat 22568305  T
Q  258 tagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    ||  |||| ||| |||||||| ||||   |||||||| || ||||| || ||||||    
T  22568304 tataaaga-cccacacgtaaggatcatcgtgcgatcaacatgtgcagttggccatc 22568250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 156 - 285
Target Start/End: Original strand, 18074948 - 18075077
Alignment:
Q  156 cctaagattcatagatgtgttgtcctacaagaacactggccttcatttcctttgaaaatcttggaatgccaatttaagtctttg-tttcaattacctttg 254  Q
    ||||||||||| ||||| || | |||||| |||||||| |||||||| |||||| |||| |||||||| |||||||||||| || ||||||||||||||     
T  18074948 cctaagattcacagatg-gtagacctacatgaacactgtccttcattgcctttggaaatattggaatgtcaatttaagtctatgctttcaattacctttc 18075046  T
Q  255 aattagcaagaccccgcacgtaagcatcact 285  Q
    || | | |||||||| |||||||| ||||||    
T  18075047 aagtggtaagaccccacacgtaaggatcact 18075077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 156 - 255
Target Start/End: Complemental strand, 1635531 - 1635431
Alignment:
Q  156 cctaagattcatagatgtgttgtcctacaagaacactggccttcatttcctttgaaaatcttggaatgccaatttaagtctttg-tttcaattacctttg 254  Q
    ||||||||||||||||| || | |||||| ||||  ||||||||||| |||| | ||||||||||| |||||||||||| |||| |||||||||||||||    
T  1635531 cctaagattcatagatgggtagacctacaggaaccttggccttcattgccttgggaaatcttggaaagccaatttaagtatttgctttcaattacctttg 1635432  T
Q  255 a 255  Q
    |    
T  1635431 a 1635431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 229 - 313
Target Start/End: Original strand, 27124171 - 27124255
Alignment:
Q  229 ttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    |||||| | ||||||||||||||||||||||||||||||| ||||||||  |||||  |||||||| |||||||| |||||||||    
T  27124171 ttaagtttatgtttcaattacctttgaattagcaagaccctgcacgtaaagatcaccgtgcgatcagcaggtgcagttagccatc 27124255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 112
Target Start/End: Complemental strand, 8245702 - 8245608
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaacaagcaccaaggg 112  Q
    ||||| ||||||| ||||||| |||| |||||||| |||||| || | ||||||||||||||||||||| |||||||||| |||||| ||||||||    
T  8245702 agtaaatacttaggaggtgaccttactaatattgagtaaaatctgctaaacctaggatgtaactagttt-ttaattagggaaacaagtaccaaggg 8245608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 238 - 313
Target Start/End: Complemental strand, 11136362 - 11136288
Alignment:
Q  238 tgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||  |||||||| |||||||| |||||||||    
T  11136362 tgtttcaattacctttgaatta-caagaccccgcacgtaaggatcaccgtgcgatcagcaggtgcagttagccatc 11136288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 219 - 313
Target Start/End: Original strand, 20144697 - 20144791
Alignment:
Q  219 gaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    |||||||||||||| | | ||||||||||||||||||| || |||||||||||||||||| |||||  ||| |||| | ||| ||||||||||||    
T  20144697 gaatgccaatttaattttatgtttcaattacctttgaaataacaagaccccgcacgtaaggatcaccgtgccatcagccggtccaattagccatc 20144791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 219 - 313
Target Start/End: Complemental strand, 22188142 - 22188048
Alignment:
Q  219 gaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    |||||||||||||| | | ||||||||||||||||||| || |||||||||||||||||| |||||  ||| |||| | ||| ||||||||||||    
T  22188142 gaatgccaatttaattttatgtttcaattacctttgaaataacaagaccccgcacgtaaggatcaccgtgccatcagccggtccaattagccatc 22188048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 223 - 309
Target Start/End: Original strand, 22412682 - 22412768
Alignment:
Q  223 gccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagc 309  Q
    |||||||||||| | | ||||||||||||||||||||||||||||| ||||||||| |||||  | |||||| |||||||| |||||    
T  22412682 gccaatttaagtttatatttcaattacctttgaattagcaagaccctgcacgtaaggatcaccgtccgatcagcaggtgcagttagc 22412768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 14078806 - 14078873
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtt 84  Q
    ||||||||||||| |||||||||||| |||| |||||||||| ||||||| |||||| ||||||||||    
T  14078806 agtaagtacttaggaggtgacattactaatactgaataaaatatgttgaaactaggaggtaactagtt 14078873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 238 - 309
Target Start/End: Original strand, 20005553 - 20005624
Alignment:
Q  238 tgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagc 309  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||   ||| |||| |||||||| |||||    
T  20005553 tgtttcaattacctttgaattagcaagaccccgcacgtaaggatcatcgtgcaatcaacaggtgcagttagc 20005624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 22568576 - 22568509
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtt 84  Q
    ||||||||||||||| |||||||||| |||| ||| |||||| |||||||||||| ||||||||||||    
T  22568576 agtaagtacttagaatgtgacattactaatactgagtaaaatctgttgaacctagaatgtaactagtt 22568509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 224 - 278
Target Start/End: Complemental strand, 8245425 - 8245371
Alignment:
Q  224 ccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaag 278  Q
    ||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||    
T  8245425 ccaatttaagtctatgtttcaattacttttgaataagcaagaccccgcacgtaag 8245371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 219 - 313
Target Start/End: Complemental strand, 9517221 - 9517127
Alignment:
Q  219 gaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    |||||||||||||||| | | |||||||||||| |||||||| ||||||| || |||||| ||||   |||||||| |||||||| |||||||||    
T  9517221 gaatgccaatttaagtttatttttcaattacctgtgaattagaaagaccctgcgcgtaaggatcatggtgcgatcaacaggtgcagttagccatc 9517127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 310
Target Start/End: Complemental strand, 14072606 - 14072500
Alignment:
Q  204 cctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgca 303  Q
    |||||| ||| |||||||  ||||||||||| | | ||||||||||||||||||||  ||||||||||||||||| |||||  || ||| | ||||||||    
T  14072606 cctttggaaaacttggaacaccaatttaagtttatatttcaattacctttgaattaaaaagaccccgcacgtaaggatcaccgtgtgattagcaggtgca 14072507  T
Q  304 attagcc 310  Q
     ||||||    
T  14072506 gttagcc 14072500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 238 - 312
Target Start/End: Complemental strand, 17382454 - 17382380
Alignment:
Q  238 tgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccat 312  Q
    ||||||||||||||||||||||||||||||||||||||| | ||| |  |||||||| |||||| | ||||||||    
T  17382454 tgtttcaattacctttgaattagcaagaccccgcacgtatggatcgccgtgcgatcaacaggtgtagttagccat 17382380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 223 - 313
Target Start/End: Original strand, 23009028 - 23009118
Alignment:
Q  223 gccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    |||||||||||| | |||||||||||||||||||||||| |||||  ||||||||| |||||  || ||||| ||| |||| |||||||||    
T  23009028 gccaatttaagtttatgtttcaattacctttgaattagcgagaccttgcacgtaaggatcaccgtgagatcagcagctgcagttagccatc 23009118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 223 - 313
Target Start/End: Complemental strand, 23779336 - 23779246
Alignment:
Q  223 gccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    |||||||||||| | |||||||||||||||||||||||| |||||  ||||||||| |||||  || ||||| ||| |||| |||||||||    
T  23779336 gccaatttaagtttatgtttcaattacctttgaattagcgagaccttgcacgtaaggatcaccgtgagatcagcagctgcagttagccatc 23779246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 239 - 312
Target Start/End: Original strand, 22813379 - 22813452
Alignment:
Q  239 gtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccat 312  Q
    ||||||||||||||||||||| |||||||||||| ||||| |||||  |||||||| |||||||| || |||||    
T  22813379 gtttcaattacctttgaattaacaagaccccgcaggtaaggatcaccgtgcgatcagcaggtgcagttggccat 22813452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 53 - 103
Target Start/End: Original strand, 21688210 - 21688259
Alignment:
Q  53 taaaatttgttgaacctaggatgtaactagtttattaattagggcaacaag 103  Q
    |||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  21688210 taaaatttgttgaacctaggatgtaactag-ttattaattagggaaacaag 21688259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 1635759 - 1635692
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtt 84  Q
    ||||| ||||||| |||||||||||| |||||||| |||||| || |||||||| || ||||||||||    
T  1635759 agtaactacttaggaggtgacattactaatattgagtaaaatctgctgaacctatgaggtaactagtt 1635692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 24251606 - 24251662
Alignment:
Q  23 tacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaac 79  Q
    ||||||| |||||||||| | |||||||| ||||||||||||||||  |||||||||    
T  24251606 tacttaggaggtgacattgctaatattgagtaaaatttgttgaaccctggatgtaac 24251662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 268
Target Start/End: Original strand, 17823365 - 17823416
Alignment:
Q  217 tggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccc 268  Q
    ||||| |||||||||||| | ||||||||||||||||||||||  |||||||    
T  17823365 tggaaagccaatttaagtttatgtttcaattacctttgaattactaagaccc 17823416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 258 - 313
Target Start/End: Original strand, 28933292 - 28933347
Alignment:
Q  258 tagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    ||||||||||||||||||||| |||||  |||||||| || ||||| |||||||||    
T  28933292 tagcaagaccccgcacgtaaggatcaccgtgcgatcaacaagtgcagttagccatc 28933347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 4340517 - 4340451
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagt 83  Q
    |||| |||||||  ||||| |||||| |||| ||| |||||| || |||||||||||||||||||||    
T  4340517 agtatgtacttaagaggtgtcattactaatactgagtaaaatctgctgaacctaggatgtaactagt 4340451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 268
Target Start/End: Complemental strand, 4340274 - 4340189
Alignment:
Q  184 aagaacactggccttcatttcctttgaaaatcttggaatgccaatttaa-gtctttgtttcaattacctttgaattagcaagaccc 268  Q
    ||||||| || ||||||||  ||||| |||| | ||||||||||| ||| |||| ||||||||||||||||||  ||| |||||||    
T  4340274 aagaacattgaccttcattgtctttggaaatttaggaatgccaatataaagtctatgtttcaattacctttgaggtagtaagaccc 4340189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 265
Target Start/End: Complemental strand, 14722437 - 14722389
Alignment:
Q  217 tggaatgccaatttaagtctttgtttcaattacctttgaattagcaaga 265  Q
    ||||||| |||||| ||| | |||||||||||||||||||||| |||||    
T  14722437 tggaatgtcaatttgagtttatgtttcaattacctttgaattaacaaga 14722389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 255
Target Start/End: Original strand, 24251834 - 24251870
Alignment:
Q  219 gaatgccaatttaagtctttgtttcaattacctttga 255  Q
    |||||||||||||| ||| ||||||||||||||||||    
T  24251834 gaatgccaatttaactctatgtttcaattacctttga 24251870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 86; Significance: 4e-41; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 17 - 150
Target Start/End: Original strand, 37528083 - 37528216
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaacaagcaccaaggggaat 116  Q
    |||||||| |||| |||||||||||| |||||||| ||||| |||||||||||| ||||||||||||||| ||||||||| |||||||||| |||| |||    
T  37528083 agtaagtatttaggaggtgacattactaatattgagtaaaacttgttgaacctatgatgtaactagtttagtaattagggaaacaagcaccgagggaaat 37528182  T
Q  117 aaacctaagtaagaccattgtcctcgacctctag 150  Q
    |||| |||||||||| ||||||||||||||||||    
T  37528183 aaacataagtaagactattgtcctcgacctctag 37528216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 17 - 154
Target Start/End: Original strand, 25181782 - 25181919
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaacaagcaccaaggggaat 116  Q
    ||||||||||||  ||| |||||||| |||||| | |||||||||||||||||||||||||||||||||| ||||||||| |||||||||  || | | |    
T  25181782 agtaagtacttaagaggcgacattactaatattcagtaaaatttgttgaacctaggatgtaactagtttagtaattagggaaacaagcacagagagaatt 25181881  T
Q  117 aaacctaagtaagaccattgtcctcgacctctaggtaa 154  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  25181882 aaacctaagtaaacccattgtcctcgacctctaggtaa 25181919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 19 - 154
Target Start/End: Complemental strand, 19787522 - 19787388
Alignment:
Q  19 taagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaacaagcaccaaggggaataa 118  Q
    ||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||| ||||||||  | ||||| | |||||||||| |||| |||||    
T  19787522 taagtacttaggaggtgacattactaatattgagtaaaatttgttgaacctaggatgt-actagtttggtgattagagaaacaagcaccgagggaaataa 19787424  T
Q  119 acctaagtaagaccattgtcctcgacctctaggtaa 154  Q
    |||||| ||  |||||||||||| ||||||| ||||    
T  19787423 acctaactagaaccattgtcctcaacctctacgtaa 19787388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 193 - 313
Target Start/End: Complemental strand, 7984099 - 7983980
Alignment:
Q  193 ggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgat 292  Q
    ||||||||||||||||| ||| || |||| |||||||||||| | ||||||||| |||||||||||||||||||||  |||||||| |||||| ||||||    
T  7984099 ggccttcatttcctttggaaacctaggaacgccaatttaagtttatgtttcaatcacctttgaattagcaagacccgacacgtaaggatcactgtgcgat 7984000  T
Q  293 catcaggtgcaattagccatc 313  Q
    ||| ||||||| |||| ||||    
T  7983999 cat-aggtgcagttagacatc 7983980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 186 - 313
Target Start/End: Original strand, 24113915 - 24114042
Alignment:
Q  186 gaacactggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcact 285  Q
    ||||| || |||||||| |||| | |||  |||||| |||||||||||| | |||||||||||||||||||||| |||||||||||| ||||| |||||     
T  24113915 gaacattgaccttcattgccttgggaaaaattggaacgccaatttaagtttatgtttcaattacctttgaattaacaagaccccgcatgtaagaatcacc 24114014  T
Q  286 atgcgatcatcaggtgcaattagccatc 313  Q
    ||||||||| |||||| | |||||||||    
T  24114015 atgcgatcagcaggtgtagttagccatc 24114042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 223 - 313
Target Start/End: Original strand, 17101573 - 17101663
Alignment:
Q  223 gccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    |||||||||||| | ||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||| ||| |||| |||||||||    
T  17101573 gccaatttaagtttatgtttcaattatctttgaattagcaagaccccgcacgtaaggatcactgtgcgatcagcagatgcagttagccatc 17101663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 2637772 - 2637697
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaatta 93  Q
    ||||||||||||| |||||||||||| |||||||| |||||| ||||||||||||||||||||||| ||||||||||    
T  2637772 agtaagtacttaggaggtgacattactaatattgagtaaaatctgttgaacctaggatgtaactag-ttattaatta 2637697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 225 - 309
Target Start/End: Complemental strand, 25226564 - 25226480
Alignment:
Q  225 caatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagc 309  Q
    |||||||||| | |||||||||||||||| |||||||||||||||||||||||| |||||| || ||||| |||||| |||||||    
T  25226564 caatttaagtttatgtttcaattaccttttaattagcaagaccccgcacgtaaggatcactgtgtgatcagcaggtgaaattagc 25226480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 238 - 313
Target Start/End: Complemental strand, 19264494 - 19264419
Alignment:
Q  238 tgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    |||||||||||||||||||||| ||| |||||||||||||| |||||  ||||||||||||||||| |||||||||    
T  19264494 tgtttcaattacctttgaattaacaaaaccccgcacgtaagaatcaccgtgcgatcatcaggtgcagttagccatc 19264419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 217 - 313
Target Start/End: Complemental strand, 17509676 - 17509580
Alignment:
Q  217 tggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    ||||| |||||||||||| | |||||||||||||||||||||| |||||||| ||| ||||| |||||  ||| |||| |||||||| |||||||||    
T  17509676 tggaaagccaatttaagtttatgtttcaattacctttgaattaacaagaccctgcatgtaaggatcaccgtgcaatcagcaggtgcagttagccatc 17509580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 225 - 313
Target Start/End: Original strand, 18448211 - 18448299
Alignment:
Q  225 caatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    |||||||||| | ||||||| || |||||||||||||||||||||||||||||| |||||  |||||||| |||||||| ||| |||||    
T  18448211 caatttaagtttatgtttcacttgcctttgaattagcaagaccccgcacgtaaggatcaccgtgcgatcagcaggtgcagttaaccatc 18448299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 278
Target Start/End: Complemental strand, 17996989 - 17996934
Alignment:
Q  223 gccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaag 278  Q
    |||||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  17996989 gccaatttaagtttatgtttcaattacctttgaattagcaagaccccgcacgtaag 17996934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 156 - 309
Target Start/End: Original strand, 24110271 - 24110424
Alignment:
Q  156 cctaagattcatagatgtgttgtcctacaagaacactggccttcatt-tcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttg 254  Q
    |||||||||||||||||||||| ||||   ||||  ||| ||||||| || |  ||||| || |||| |||||||||||| | ||||||||||||||||     
T  24110271 cctaagattcatagatgtgttgacctaatggaaccttggacttcattgtcgtgggaaaaact-ggaacgccaatttaagtttatgtttcaattaccttta 24110369  T
Q  255 aattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagc 309  Q
    ||||||||||||||| ||| || | |||||||||| |||| || ||||| |||||    
T  24110370 aattagcaagaccccacacatatggatcactatgcaatcagcatgtgcagttagc 24110424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 135
Target Start/End: Complemental strand, 7984321 - 7984219
Alignment:
Q  31 aggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaacaagcaccaaggggaataaacctaagtaaga 130  Q
    |||||||||||| |||| ||| |||||| | ||||||  ||||||||||||| ||||||||||||  ||||||||||||||||| | ||||| |||||||    
T  7984321 aggtgacattaccaatagtgagtaaaatcttttgaactaaggatgtaactag-ttattaattaggaaaacaagcaccaaggggagtgaacct-agtaaga 7984224  T
Q  131 ccatt 135  Q
    |||||    
T  7984223 ccatt 7984219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 238 - 313
Target Start/End: Original strand, 24723273 - 24723348
Alignment:
Q  238 tgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    ||||||||||||||||||||||||||||||||  ||||||| |||||  |||||||| |||||| | |||||||||    
T  24723273 tgtttcaattacctttgaattagcaagaccccagacgtaaggatcaccgtgcgatcagcaggtgtagttagccatc 24723348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 148
Target Start/End: Complemental strand, 14528847 - 14528736
Alignment:
Q  34 tgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaacaagcaccaaggggaataaacctaagtaagacca 133  Q
    ||||||||  |||||||| |||||| || ||||| |||||||||| ||||| ||||||||||| |||||||||||| |||| | ||||| ||| ||||||    
T  14528847 tgacattattaatattgagtaaaatctgctgaacttaggatgtaaatagtt-attaattagggaaacaagcaccaa-gggagtgaacct-agtgagacca 14528751  T
Q  134 ttgtcctcgacctct 148  Q
    || ||||||||||||    
T  14528750 ttatcctcgacctct 14528736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 278
Target Start/End: Complemental strand, 24270028 - 24269973
Alignment:
Q  223 gccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaag 278  Q
    |||||||||||| | | |||||||||||||||||||||||||||||| ||||||||    
T  24270028 gccaatttaagtttatatttcaattacctttgaattagcaagaccccacacgtaag 24269973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 224 - 313
Target Start/End: Complemental strand, 19787232 - 19787143
Alignment:
Q  224 ccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    ||||||||||||| |||||||||||||||||||||  ||||| |||||| ||||| |||||  ||| |||| || || || |||||||||    
T  19787232 ccaatttaagtctatgtttcaattacctttgaattgacaagatcccgcatgtaaggatcaccgtgcaatcagcatgtacagttagccatc 19787143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 84
Target Start/End: Complemental strand, 21315410 - 21315337
Alignment:
Q  11 cataggagtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtt 84  Q
    ||||| ||||||||||| | |||||||||||| |||||| | |||||| | |||||||||||| ||||||||||    
T  21315410 catagtagtaagtacttgggaggtgacattactaatatttagtaaaatctattgaacctaggaggtaactagtt 21315337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 249 - 313
Target Start/End: Complemental strand, 14528613 - 14528549
Alignment:
Q  249 cctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    ||||||||||||||||||||||||| |||| |||| | |||||||| |||||||| ||| |||||    
T  14528613 cctttgaattagcaagaccccgcacttaaggatcaatgtgcgatcagcaggtgcagttatccatc 14528549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 26832006 - 26832046
Alignment:
Q  238 tgtttcaattacctttgaattagcaagaccccgcacgtaag 278  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  26832006 tgtttcaattacctttgaattagcaagacgccgcacgtaag 26832046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 283
Target Start/End: Original strand, 23892849 - 23892894
Alignment:
Q  238 tgtttcaattacctttgaattagcaagaccccgcacgtaagcatca 283  Q
    |||||||||||||||||||||||||||| |||||| ||||| ||||    
T  23892849 tgtttcaattacctttgaattagcaagatcccgcatgtaaggatca 23892894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 30832139 - 30832091
Alignment:
Q  19 taagtacttagaaggtgacattacaaatattgaataaaatttgttgaac 67  Q
    ||||||||||| |||||||||||| |||||||| |||||| ||||||||    
T  30832139 taagtacttaggaggtgacattactaatattgagtaaaatatgttgaac 30832091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 6885736 - 6885669
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtt 84  Q
    ||||||||||||| |||||||||||  || | | | |||||| || ||||||||||||||||||||||    
T  6885736 agtaagtacttaggaggtgacattatcaagacttagtaaaatctgctgaacctaggatgtaactagtt 6885669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 13314323 - 13314390
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtt 84  Q
    ||||||||||||| |||| |||| ||||||| ||| |||||| || ||||||||||| |||| |||||    
T  13314323 agtaagtacttaggaggttacataacaaatactgagtaaaatatgctgaacctaggaggtaattagtt 13314390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 28276116 - 28276183
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtt 84  Q
    ||||||||||||| |||||||||||  |||||||| |||||| |  ||||||||||  ||||||||||    
T  28276116 agtaagtacttaggaggtgacattaataatattgagtaaaatctactgaacctaggtggtaactagtt 28276183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 304
Target Start/End: Original strand, 30121734 - 30121834
Alignment:
Q  204 cctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgca 303  Q
    ||||||||||| | |||| |||||||||||||| |||||||| |||| ||||   || |||||||  |||||||| |||| | || ||||| || |||||    
T  30121734 cctttgaaaatttaggaacgccaatttaagtctatgtttcaactaccattgagagagtaagaccctacacgtaaggatcattgtgtgatcaacatgtgca 30121833  T
Q  304 a 304  Q
    |    
T  30121834 a 30121834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 71; Significance: 4e-32; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 157 - 283
Target Start/End: Complemental strand, 24215088 - 24214962
Alignment:
Q  157 ctaagattcatagatgtgttgtcctacaagaacactggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttgaa 256  Q
    |||||||||||||||| ||   |||||| ||||| ||||| ||||| |||||| ||||||||||| |||||||||||||| |||||||||||||||||||    
T  24215088 ctaagattcatagatgggtccacctacatgaacattggccatcattgcctttggaaatcttggaaagccaatttaagtctatgtttcaattacctttgaa 24214989  T
Q  257 ttagcaagaccccgcacgtaagcatca 283  Q
    || |||||||||| |||||||| ||||    
T  24214988 ttcgcaagacccctcacgtaaggatca 24214962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 33191447 - 33191312
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaacaagcaccaaggggaat 116  Q
    ||||| ||||||| |||||||||||| |||| ||| |||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| |    
T  33191447 agtaaatacttaggaggtgacattactaatactgagtaaaatatgttgaacctaggatgtaactag-ttattaattagggaaacaagcaccaaggggagt 33191349  T
Q  117 aaacctaagtaagaccattgtcctcgacctctaggtaa 154  Q
     | ||||| || ||||||| |||||||||||| |||||    
T  33191348 gagcctaa-taggaccattatcctcgacctcttggtaa 33191312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 17 - 154
Target Start/End: Original strand, 9787292 - 9787425
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaacaagcaccaaggggaat 116  Q
    ||||||||||||  |||||||||||| | |||||| |||||| || ||||||| |||     |||||||||||||||||| ||||||||||||||| |||    
T  9787292 agtaagtacttaagaggtgacattactagtattgagtaaaatctgctgaaccttggag----ctagtttattaattagggaaacaagcaccaagggaaat 9787387  T
Q  117 aaacctaagtaagaccattgtcctcgacctctaggtaa 154  Q
    |||||||||||| ||||||||||||||| |||||||||    
T  9787388 aaacctaagtaacaccattgtcctcgacatctaggtaa 9787425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 22664896 - 22664799
Alignment:
Q  53 taaaatttgttgaacctaggatgtaactagtttattaattagggcaacaagcaccaa-ggggaataaacctaagtaagaccattgtcctcgacctctag 150  Q
    |||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||| |||| ||||| || |||||||||||||||||||||||||||    
T  22664896 taaaatctgttgaacctaggatgtaactagtttagtaattagggaaacaagcaccaaggggggataaatct-agtaagaccattgtcctcgacctctag 22664799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 224 - 313
Target Start/End: Original strand, 15543635 - 15543724
Alignment:
Q  224 ccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    ||||||||||| | |||||||||||||||||||||||||||| |||||||||||| |||||  |||||||| ||||||||||||||||||    
T  15543635 ccaatttaagtttatgtttcaattacctttgaattagcaagaacccgcacgtaaggatcaccgtgcgatcagcaggtgcaattagccatc 15543724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 156 - 301
Target Start/End: Complemental strand, 33191243 - 33191098
Alignment:
Q  156 cctaagattcatagatgtgttgtcctacaagaacactggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttga 255  Q
    ||||||||||||||||| |  |||||  || | || ||||||||||| |||||| ||| || |||| |||||||||||| | ||||| |||||| |||||    
T  33191243 cctaagattcatagatgggaagtccttaaaaagcattggccttcattgcctttggaaacctaggaacgccaatttaagtttatgttttaattacttttga 33191144  T
Q  256 attagcaagaccccgcacgtaagcatcactatgcgatcatcaggtg 301  Q
    ||||||||||||| ||||||||| ||||| ||||||||| ||||||    
T  33191143 attagcaagaccctgcacgtaaggatcaccatgcgatcaacaggtg 33191098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 17 - 148
Target Start/End: Original strand, 15572750 - 15572884
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaacaagcaccaaggggaat 116  Q
    ||||||||||||| |||||||||||| ||||  || ||||||||||||||||||| |||||||||| ||||||||||||| |||||| |||||||||| |    
T  15572750 agtaagtacttaggaggtgacattactaatacagagtaaaatttgttgaacctagtatgtaactag-ttattaattagggaaacaagtaccaaggggagt 15572848  T
Q  117 aaaccta----agtaagaccattgtcctcgacctct 148  Q
     |||| |    ||| |||||||| ||||||||||||    
T  15572849 gaaccgatcctagtgagaccattctcctcgacctct 15572884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 24282051 - 24281911
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaacaagcaccaaggggaat 116  Q
    |||||||| |||||| |||||||||| |||||||| |||||| |  |||||||||||| ||||||| ||||||||||||| ||||||||| ||||||| |    
T  24282051 agtaagtatttagaatgtgacattactaatattgagtaaaatcttatgaacctaggatataactag-ttattaattagggaaacaagcactaaggggagt 24281953  T
Q  117 aaac----ctaagtaagaccattgtcctcgacctctaggtaa 154  Q
     |||    |  ||||||||||||||||||||||||| |||||    
T  24281952 gaactgatcctagtaagaccattgtcctcgacctcttggtaa 24281911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 157 - 312
Target Start/End: Complemental strand, 14780115 - 14779960
Alignment:
Q  157 ctaagattcatagatgtgttgtcctacaagaacactggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttgaa 256  Q
    |||||||||||||||| || | ||||  |||||  ||||||||||| |||| | |||   ||||| |||||||||||| | |||||||||||||||||||    
T  14780115 ctaagattcatagatgggtcgacctatgagaactttggccttcattgccttgggaaacactggaacgccaatttaagtttatgtttcaattacctttgaa 14780016  T
Q  257 ttagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccat 312  Q
    ||| ||||||||| |||||||| |||||   |||||||  ||||||| ||||||||    
T  14780015 ttaacaagaccccacacgtaagaatcaccgcgcgatcagaaggtgcatttagccat 14779960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 219 - 313
Target Start/End: Original strand, 25404091 - 25404185
Alignment:
Q  219 gaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    |||||||||||||||| | |||||||||||||||||||||| |||||||||||||||| | |||||  |||||||| || ||||| |||||||||    
T  25404091 gaatgccaatttaagtttatgtttcaattacctttgaattaacaagaccccgcacgtagggatcaccgtgcgatcaacatgtgcagttagccatc 25404185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 224 - 313
Target Start/End: Original strand, 18528859 - 18528948
Alignment:
Q  224 ccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||  ||| |||| |||||| | |||||||||    
T  18528859 ccaatttaagtttatgtttcaattacctttgaattagcaagaccccgcacgtaaggatcaccgtgcaatcagcaggtgtagttagccatc 18528948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 156 - 303
Target Start/End: Original strand, 9787494 - 9787641
Alignment:
Q  156 cctaagattcatagatgtgttgtcctacaagaacactggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttga 255  Q
    |||||||||||||| |  | || ||||| ||||||||| ||| |||| |||||| ||| | | ||| |||||||||||||| |||||||||||||||| |    
T  9787494 cctaagattcatagttaggctgacctactagaacactgacctgcattgcctttggaaaacctagaacgccaatttaagtctatgtttcaattacctttca 9787593  T
Q  256 attagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgca 303  Q
    ||||||||||||| | | ||||| || ||  |||||||| ||||||||    
T  9787594 attagcaagaccctgaatgtaaggattaccgtgcgatcaacaggtgca 9787641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 156 - 263
Target Start/End: Complemental strand, 22664728 - 22664621
Alignment:
Q  156 cctaagattcatagatgtgttgtcctacaagaacactggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttga 255  Q
    |||||||||||||  || || | |||||| ||||| ||||||||||| |||||| |||||||||||  ||||||||||||| |||| ||||||| |||||    
T  22664728 cctaagattcatacgtgggtagacctacatgaacattggccttcattgcctttggaaatcttggaaaaccaatttaagtctatgttacaattacttttga 22664629  T
Q  256 attagcaa 263  Q
    ||||||||    
T  22664628 attagcaa 22664621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 225 - 308
Target Start/End: Original strand, 26612679 - 26612762
Alignment:
Q  225 caatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattag 308  Q
    |||||||||| | ||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||| || ||||| ||||    
T  26612679 caatttaagtttatgtttcaattacctttgaattagcaagaccctgcacgtaaggatcaccatgcgatcagcatgtgcagttag 26612762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 313
Target Start/End: Original strand, 25960738 - 25960856
Alignment:
Q  195 ccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatca 294  Q
    |||||||| |||||| |||  | |||| | |||||||||||| ||| ||||||||||||||||||| ||||||||||| | ||| |||| | ||||||||    
T  25960738 ccttcattgcctttggaaacgtaggaacgtcaatttaagtctatgtatcaattacctttgaattagtaagaccccgcatgcaaggatcattgtgcgatca 25960837  T
Q  295 tcaggtgcaattagccatc 313  Q
     |||||||| |||||||||    
T  25960838 gcaggtgcagttagccatc 25960856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 192 - 301
Target Start/End: Complemental strand, 16112268 - 16112159
Alignment:
Q  192 tggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcga 291  Q
    ||||||| ||| |||||| ||| || ||||  ||||||||||| | ||||||||||||| ||||||||||||||||||||||||||| ||| |  |||||    
T  16112268 tggcctttattgcctttggaaacctaggaacaccaatttaagtttatgtttcaattaccattgaattagcaagaccccgcacgtaaggatctccgtgcga 16112169  T
Q  292 tcatcaggtg 301  Q
    ||| ||||||    
T  16112168 tcaacaggtg 16112159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 192 - 313
Target Start/End: Complemental strand, 16179536 - 16179415
Alignment:
Q  192 tggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcga 291  Q
    ||||||||||| |||| |||||   ||||||||||||||||||   |||||||||||||||| ||||| |||||||||||||||||| |||    |||||    
T  16179536 tggccttcattgccttggaaaaaactggaatgccaatttaagttcatgtttcaattacctttaaattaacaagaccccgcacgtaaggatcgtcgtgcga 16179437  T
Q  292 tcatcaggtgcaattagccatc 313  Q
    ||| ||| |||| |||||||||    
T  16179436 tcagcagatgcagttagccatc 16179415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 16360640 - 16360575
Alignment:
Q  19 taagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtt 84  Q
    |||||||||||||||||||||||| |||||||| |||||| ||||||||||| |||||||||||||    
T  16360640 taagtacttagaaggtgacattactaatattgagtaaaatatgttgaacctacgatgtaactagtt 16360575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 156 - 255
Target Start/End: Complemental strand, 28008670 - 28008572
Alignment:
Q  156 cctaagattcatagatgtgttgtcctacaagaacactggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttga 255  Q
    ||||||||||||||||| |||| |||||| ||||| |||  |||||| |||| |||||||||||||   |||||||||||| ||||||||||||||||||    
T  28008670 cctaagattcatagatgggttggcctacaggaacattggaattcattgcctt-gaaaatcttggaacatcaatttaagtctatgtttcaattacctttga 28008572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 156 - 313
Target Start/End: Original strand, 14781420 - 14781577
Alignment:
Q  156 cctaagattcatagatgtgttgtcctacaagaacactggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttga 255  Q
    ||||||||||||||||| |  | ||||  |||||  ||||||||||| ||||   |||   ||||| | |||||||||| | ||||||||||||||||||    
T  14781420 cctaagattcatagatgggaagacctaagagaaccttggccttcattgccttgagaaacactggaaagtcaatttaagtttatgtttcaattacctttga 14781519  T
Q  256 attagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    ||||||||||||||||  ||||| || ||  |||||||| || ||||| |||||||||    
T  14781520 attagcaagaccccgcctgtaaggattaccgtgcgatcagcaagtgcagttagccatc 14781577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 16112486 - 16112390
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaacaagcaccaagggga 114  Q
    |||||||||||||||| | ||||||| ||||  || |||||| |  |||||||||||||||||||| ||||||||||||| |||||||||||| ||||    
T  16112486 agtaagtacttagaagtttacattactaataccgagtaaaatctactgaacctaggatgtaactag-ttattaattagggaaacaagcaccaaaggga 16112390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 217 - 313
Target Start/End: Original strand, 16916562 - 16916656
Alignment:
Q  217 tggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    ||||| ||||||||||||  |||| ||||||||||||||||||||||||||| ||| ||||| |||||  |||||||| || ||||| |||||||||    
T  16916562 tggaaagccaatttaagt--ttgtctcaattacctttgaattagcaagaccctgcatgtaaggatcaccgtgcgatcaacatgtgcagttagccatc 16916656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 156 - 313
Target Start/End: Original strand, 18100545 - 18100702
Alignment:
Q  156 cctaagattcatagatgtgttgtcctacaagaacactggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttga 255  Q
    ||||||||| ||||||| |  | ||| || ||||| || |||||||| |||||| ||| ||||||| ||| ||||| || | |||||||||||||  |||    
T  18100545 cctaagatttatagatgggaagaccttcaggaacattgaccttcattgcctttggaaaccttggaacgccgatttatgtttatgtttcaattaccactga 18100644  T
Q  256 attagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    |||| |||||||||||||||||| |||| | ||||| || || ||||| ||| |||||    
T  18100645 attaacaagaccccgcacgtaaggatcattgtgcgaccagcatgtgcagttatccatc 18100702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 224 - 313
Target Start/End: Original strand, 21334384 - 21334473
Alignment:
Q  224 ccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    ||||||||| | | |||||||||| ||||||||||||||||||||||||| |||| |||||  |||||||| |||||||| ||| |||||    
T  21334384 ccaatttaaatttatgtttcaattgcctttgaattagcaagaccccgcacataaggatcacagtgcgatcaacaggtgcagttatccatc 21334473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 156 - 312
Target Start/End: Complemental strand, 21449646 - 21449490
Alignment:
Q  156 cctaagattcatagatgtgttgtcctacaagaacactggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttga 255  Q
    |||||||||||||||||||| | ||||   ||||  | ||||||||| |||||| |||   | ||| |||||||||||| | ||||||| ||||||||||    
T  21449646 cctaagattcatagatgtgtcgacctaagggaaccttagccttcattgcctttggaaacactagaacgccaatttaagtttatgtttcatttacctttga 21449547  T
Q  256 attagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccat 312  Q
    |||| ||||||||| ||| |||| |||||  ||| || | |||||||| ||||||||    
T  21449546 attaacaagacccctcacataaggatcaccgtgcaattagcaggtgcagttagccat 21449490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 217 - 313
Target Start/End: Original strand, 21985618 - 21985714
Alignment:
Q  217 tggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    ||||| || ||||||||| | ||||||||||||||||||||||||||||||||||| ||||| |||||  | |||||| ||| ||||  ||||||||    
T  21985618 tggaaagcgaatttaagtttatgtttcaattacctttgaattagcaagaccccgcaagtaaggatcaccgtacgatcagcagatgcatatagccatc 21985714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 154
Target Start/End: Original strand, 25960490 - 25960630
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaacaagcaccaaggggaat 116  Q
    ||||||||||||  |||| ||||||| |||| | | |||||| ||||||||||||||||||||||| || |||||||||| |||||| ||||| |||| |    
T  25960490 agtaagtacttatgaggtaacattactaatactaagtaaaatctgttgaacctaggatgtaactag-ttgttaattagggaaacaagtaccaaagggagt 25960588  T
Q  117 aaaccta----agtaagaccattgtcctcgacctctaggtaa 154  Q
     |||| |    ||| |||||||| |||||||||||| |||||    
T  25960589 gaaccgatcctagtgagaccattctcctcgacctcttggtaa 25960630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 238 - 313
Target Start/End: Complemental strand, 727919 - 727844
Alignment:
Q  238 tgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||   |||||||| |||||||| ||| |||||    
T  727919 tgtttcaattacctttgaattaacaagaccccgcacgtaaggatcaacgtgcgatcagcaggtgcagttaaccatc 727844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 17120835 - 17120901
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtt 84  Q
    ||||||||||||| |||||||||||| |||||||| |||||| || ||||||||||||||||||||||    
T  17120835 agtaagtacttaggaggtgacattactaatattgagtaaaatctg-tgaacctaggatgtaactagtt 17120901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 238 - 313
Target Start/End: Complemental strand, 18826107 - 18826032
Alignment:
Q  238 tgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    |||||||||||||||||||||| ||||||| |||||||||| |||||  ||| |||| |||||||| |||||||||    
T  18826107 tgtttcaattacctttgaattaacaagacctcgcacgtaaggatcaccgtgcaatcaacaggtgcagttagccatc 18826032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 186 - 313
Target Start/End: Complemental strand, 24281811 - 24281684
Alignment:
Q  186 gaacactggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcact 285  Q
    ||||| |||||||||||  ||||| ||| || ||||  ||||||||||| | |||||||||| ||||||| |||| || |||||||| ||||| |||||     
T  24281811 gaacattggccttcattgtctttggaaacctaggaacaccaatttaagtttatgtttcaattgcctttgagttagaaaaaccccgcatgtaaggatcacc 24281712  T
Q  286 atgcgatcatcaggtgcaattagccatc 313  Q
     || ||||| |||||||| |||||||||    
T  24281711 gtgggatcagcaggtgcagttagccatc 24281684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 245 - 313
Target Start/End: Complemental strand, 18830926 - 18830858
Alignment:
Q  245 attacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    |||||||||| |||| |||||||||||| ||||| |||||  |||||||| ||||||||||||||||||    
T  18830926 attacctttgtattaacaagaccccgcatgtaaggatcaccgtgcgatcagcaggtgcaattagccatc 18830858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 304
Target Start/End: Complemental strand, 16360437 - 16360290
Alignment:
Q  157 ctaagattcatagatgtgttgtcctacaagaacactggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttgaa 256  Q
    |||||||||||||||| |    ||| ||| |||| ||| ||||||| |||||||||||||  ||| || ||||||||||| | |||||||||| ||||||    
T  16360437 ctaagattcatagatgggaaaaccttcaaaaacattggtcttcattgcctttgaaaatctaagaacgcgaatttaagtctatatttcaattacttttgaa 16360338  T
Q  257 ttagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaa 304  Q
      |  ||||||||||||||||| || ||  |||||||| || ||||||    
T  16360337 agactaagaccccgcacgtaaggattaccgtgcgatcagcatgtgcaa 16360290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 34481707 - 34481640
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtt 84  Q
    ||||||||||||| |||| ||||||| | |||||| |||||||||||||||||  |||||||||||||    
T  34481707 agtaagtacttaggaggtaacattactattattgagtaaaatttgttgaacctgagatgtaactagtt 34481640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 156 - 253
Target Start/End: Original strand, 51472777 - 51472875
Alignment:
Q  156 cctaagattcatagatgtgttgtcctacaagaacactggccttcatttcctttg-aaaatcttggaatgccaatttaagtctttg-tttcaattaccttt 253  Q
    ||||||||||||||||| || | |||||| ||||| || |||||||| |||||| ||||| |||||||| |||||||||||| || ||||||||||||||    
T  51472777 cctaagattcatagatg-gtaggcctacatgaacattgaccttcattgcctttggaaaatattggaatgtcaatttaagtctatgctttcaattaccttt 51472875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 16787079 - 16787164
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaacaag 103  Q
    ||||||||||||  |||||||||||   ||||||| |||||| ||||||||||| ||||||||||| |||||||||| || ||||||    
T  16787079 agtaagtacttaagaggtgacattaatcatattgagtaaaatctgttgaacctaagatgtaactag-ttattaattaaggaaacaag 16787164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 238 - 312
Target Start/End: Original strand, 18735886 - 18735960
Alignment:
Q  238 tgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccat 312  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||   |||||||| || ||||| ||| ||||    
T  18735886 tgtttcaattatctttgaattagcaagaccccgcacgtaaggatcatcgtgcgatcaacaagtgcagttatccat 18735960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 223 - 313
Target Start/End: Complemental strand, 23180262 - 23180172
Alignment:
Q  223 gccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    |||||||||||| | ||||||||||||| ||||||||  |||||||| |||||||| |||||  ||||||||  ||||| | |||||||||    
T  23180262 gccaatttaagtttatgtttcaattaccattgaattaaaaagaccccacacgtaaggatcaccgtgcgatcagtaggtgtagttagccatc 23180172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 238 - 284
Target Start/End: Original strand, 25403728 - 25403774
Alignment:
Q  238 tgtttcaattacctttgaattagcaagaccccgcacgtaagcatcac 284  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||    
T  25403728 tgtttcaattacctttgaattagcaagaccctgcacgtaaggatcac 25403774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 26021507 - 26021441
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagt 83  Q
    |||||||| |||| |||||| ||||| |||||||| |||||||||||||||||| |||||| |||||    
T  26021507 agtaagtatttaggaggtgatattactaatattgagtaaaatttgttgaacctaagatgtatctagt 26021441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 9402363 - 9402296
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtt 84  Q
    ||||||||||||| |||||||||||| |||| | | ||||||||| ||||||||||| || |||||||    
T  9402363 agtaagtacttaggaggtgacattactaatactaagtaaaatttgctgaacctaggaggtgactagtt 9402296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 238 - 313
Target Start/End: Complemental strand, 24054429 - 24054355
Alignment:
Q  238 tgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    ||||||| ||| ||||||||||||||||||||||| ||||  |||||  |||||||| |||||||| |||||||||    
T  24054429 tgtttcatttatctttgaattagcaagaccccgcatgtaa-tatcaccgtgcgatcagcaggtgcagttagccatc 24054355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 292
Target Start/End: Complemental strand, 22623353 - 22623299
Alignment:
Q  238 tgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgat 292  Q
    ||||||||||||||||||||||  ||||||||||||||||| |||| | ||||||    
T  22623353 tgtttcaattacctttgaattataaagaccccgcacgtaaggatcattgtgcgat 22623299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 313
Target Start/End: Original strand, 26648654 - 26648728
Alignment:
Q  239 gtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    ||||||||||||||||||||| ||||||||| | |||||  |||||| || || || |||||||| |||||||||    
T  26648654 gtttcaattacctttgaattaacaagaccccacgcgtaaagatcactgtgtgaccagcaggtgcagttagccatc 26648728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 240 - 313
Target Start/End: Original strand, 15160153 - 15160226
Alignment:
Q  240 tttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    |||||||||||||||||||| ||||| |||||||||||| ||||   || ||||| |||||| | |||||||||    
T  15160153 tttcaattacctttgaattaacaagatcccgcacgtaaggatcatcgtgtgatcaacaggtgaagttagccatc 15160226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 101 - 154
Target Start/End: Original strand, 18100424 - 18100476
Alignment:
Q  101 aagcaccaaggggaataaacctaagtaagaccattgtcctcgacctctaggtaa 154  Q
    |||||||||||||| | |||||| ||||||||||| ||||||||||||||||||    
T  18100424 aagcaccaaggggagtgaaccta-gtaagaccattatcctcgacctctaggtaa 18100476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 12012170 - 12012222
Alignment:
Q  31 aggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagt 83  Q
    |||||||||||| |||||||| |||||| | ||||||||| ||||||||||||    
T  12012170 aggtgacattactaatattgagtaaaatatattgaacctacgatgtaactagt 12012222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 28008885 - 28008818
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtt 84  Q
    |||||||| |||| |||||||||||  |||||||| |||  | ||||||| |||||||||||||||||    
T  28008885 agtaagtatttaggaggtgacattattaatattgagtaagttatgttgaatctaggatgtaactagtt 28008818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 31235287 - 31235354
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtt 84  Q
    ||||| ||||||| |||||||||||| |||| ||| |||||| || ||| ||||||| ||||||||||    
T  31235287 agtaaatacttaggaggtgacattaccaatactgagtaaaatctgctgagcctaggaggtaactagtt 31235354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 285
Target Start/End: Original strand, 12012381 - 12012475
Alignment:
Q  192 tggccttcatttcctttgaaaatcttggaatgccaatttaa-gtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcact 285  Q
    |||||||||||||||||| |||| | |||||  |||| ||| |||| ||||||||||||||||||   || |||||||| || ||||| ||||||    
T  12012381 tggccttcatttcctttggaaatttaggaattgcaatataaagtctatgtttcaattacctttgagggagtaagaccccacatgtaaggatcact 12012475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 284
Target Start/End: Original strand, 15807582 - 15807680
Alignment:
Q  187 aacactggccttcatttcctttgaaaatcttggaatgccaatttaagt-ctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcac 284  Q
    |||| ||| ||||||||||| || |||| | ||||||||||| ||| | || ||||||||||||||||||  ||| |||||||| ||||| || |||||    
T  15807582 aacattggtcttcatttcctctggaaatttaggaatgccaatataaattctatgtttcaattacctttgaggtagtaagaccccacacgtgaggatcac 15807680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 71
Target Start/End: Original strand, 23036016 - 23036070
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctag 71  Q
    ||||||| ||||| |||||||||||| |||| ||| |||||| ||||||||||||    
T  23036016 agtaagtgcttaggaggtgacattactaatactgagtaaaatctgttgaacctag 23036070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 313
Target Start/End: Complemental strand, 29242938 - 29242848
Alignment:
Q  223 gccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    |||||||||| | | |||||||||||||||||||||  | ||| |||| ||||||| | ||| ||||||| |  ||||||| |||||||||    
T  29242938 gccaatttaaatttatgtttcaattacctttgaattgacgagatcccgtacgtaaggaccaccatgcgattagtaggtgcagttagccatc 29242848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 84
Target Start/End: Original strand, 15812471 - 15812544
Alignment:
Q  11 cataggagtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtt 84  Q
    ||||| ||||||||||||| |||| ||||||| || | ||| |||||| || |||||||||||  |||||||||    
T  15812471 catagtagtaagtacttaggaggtaacattactaagactgagtaaaatctgctgaacctaggagataactagtt 15812544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 313
Target Start/End: Original strand, 15812770 - 15812843
Alignment:
Q  240 tttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    ||||||| |||||||||||| ||||||||| |||||||  |||||| || || || || ||||| |||||||||    
T  15812770 tttcaatcacctttgaattaacaagaccccacacgtaaagatcactgtgtgaccagcatgtgcagttagccatc 15812843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 32382318 - 32382367
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaa 66  Q
    ||||||||||||| ||||||||| || |||||||| |||||| |||||||    
T  32382318 agtaagtacttaggaggtgacataactaatattgagtaaaatatgttgaa 32382367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 263 - 303
Target Start/End: Original strand, 25404219 - 25404259
Alignment:
Q  263 agaccccgcacgtaagcatcactatgcgatcatcaggtgca 303  Q
    |||||||||||||||| |||||| |||||||| ||||||||    
T  25404219 agaccccgcacgtaaggatcactgtgcgatcaacaggtgca 25404259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 269
Target Start/End: Complemental strand, 44795876 - 44795824
Alignment:
Q  217 tggaatgccaatttaagtctttgtttcaattacctttgaattagcaagacccc 269  Q
    ||||| ||||||||||||   || ||||||||||||||||||| |||||||||    
T  44795876 tggaaggccaatttaagttcatgcttcaattacctttgaattaacaagacccc 44795824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 70; Significance: 1e-31; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 154
Target Start/End: Original strand, 24264799 - 24264934
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaacaagcaccaaggggaat 116  Q
    ||||||||||||| |||||||||||| |||| ||| |||||||||||||||| | ||||||||||| ||||||||||||| ||||||||||||||||| |    
T  24264799 agtaagtacttaggaggtgacattactaatactgagtaaaatttgttgaaccaatgatgtaactag-ttattaattagggaaacaagcaccaaggggagt 24264897  T
Q  117 aaacctaagtaagaccattgtcctcgacctctaggtaa 154  Q
     ||||| ||| || || ||||||||||||||| |||||    
T  24264898 gaacct-agtgagtcctttgtcctcgacctcttggtaa 24264934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 154
Target Start/End: Original strand, 24341430 - 24341565
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaacaagcaccaaggggaat 116  Q
    ||||||||||||| |||||||||||| |||| ||| |||||||||||||||| | ||||||||||| ||||||||||||| ||||||||||||||||| |    
T  24341430 agtaagtacttaggaggtgacattactaatactgagtaaaatttgttgaaccaatgatgtaactag-ttattaattagggaaacaagcaccaaggggagt 24341528  T
Q  117 aaacctaagtaagaccattgtcctcgacctctaggtaa 154  Q
     ||||| ||| || || ||||||||||||||| |||||    
T  24341529 gaacct-agtgagtcctttgtcctcgacctcttggtaa 24341565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 156 - 313
Target Start/End: Complemental strand, 34488200 - 34488043
Alignment:
Q  156 cctaagattcatagatgtgttgtcctacaagaacactggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttga 255  Q
    ||||||||||||||||| |  | ||| || ||||| |||||||||||  ||||| |||||| ||||  ||||||||||| | ||| |||||||||||| |    
T  34488200 cctaagattcatagatgggaagaccttcaggaacattggccttcattgtctttggaaatctaggaacaccaatttaagtttatgtatcaattacctttaa 34488101  T
Q  256 attagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    |||||||||| | ||||| |||| |||||  ||||||||||| |||||||||||||||    
T  34488100 attagcaagatcacgcacataaggatcaccgtgcgatcatcaagtgcaattagccatc 34488043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 225 - 313
Target Start/End: Original strand, 24659650 - 24659738
Alignment:
Q  225 caatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    |||||||||  | |||||||||||||||||||||| |||||||||||||||||| |||||  ||||||||||||||||| |||||||||    
T  24659650 caatttaagcttatgtttcaattacctttgaattaacaagaccccgcacgtaaggatcaccgtgcgatcatcaggtgcagttagccatc 24659738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 186 - 312
Target Start/End: Original strand, 18207828 - 18207954
Alignment:
Q  186 gaacactggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcact 285  Q
    ||||| ||||||||||| |||||| |||||| | ||||||||||||||||| ||||||| ||||||||||||| | ||||||||||| ||||| || ||     
T  18207828 gaacattggccttcattgcctttggaaatctagaaatgccaatttaagtctatgtttcagttacctttgaattcgtaagaccccgcatgtaaggattacc 18207927  T
Q  286 atgcgatcatcaggtgcaattagccat 312  Q
     || ||||| || | ||||||||||||    
T  18207928 gtgtgatcagcaagagcaattagccat 18207954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 186 - 313
Target Start/End: Original strand, 20563714 - 20563841
Alignment:
Q  186 gaacactggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcact 285  Q
    ||||| ||||||||||| |||| | |||   ||||| |||||||||||||| ||||| ||||||||||||||||| || ||||| |||||||| |||||     
T  20563714 gaacattggccttcattgccttgggaaacactggaaagccaatttaagtctatgtttaaattacctttgaattaggaaaaccccacacgtaaggatcacc 20563813  T
Q  286 atgcgatcatcaggtgcaattagccatc 313  Q
     | |||||| |||||||| |||||||||    
T  20563814 gtacgatcaacaggtgcagttagccatc 20563841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 192 - 313
Target Start/End: Original strand, 16523164 - 16523288
Alignment:
Q  192 tggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttgaattagca---agaccccgcacgtaagcatcactatg 288  Q
    ||||||||||| |||| | ||||  ||||| |||||||||||||| |||| ||||||||||||||||||||   |||||||||| ||||| || ||  ||    
T  16523164 tggccttcattgccttgggaaatactggaaagccaatttaagtctatgttacaattacctttgaattagcaattagaccccgcatgtaaggataaccgtg 16523263  T
Q  289 cgatcatcaggtgcaattagccatc 313  Q
    |||||| |||||||| |||||||||    
T  16523264 cgatcagcaggtgcagttagccatc 16523288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 17170879 - 17170960
Alignment:
Q  11 cataggagtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaatta 93  Q
    ||||| ||||||||||||| |||||||||||| ||| |||| |||||| ||||||||||||||||||||||| ||||||||||    
T  17170879 catagtagtaagtacttaggaggtgacattactaattttgagtaaaatctgttgaacctaggatgtaactag-ttattaatta 17170960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 223 - 309
Target Start/End: Original strand, 19008178 - 19008264
Alignment:
Q  223 gccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagc 309  Q
    |||||||||||| | ||||||||||| ||||||||||||||||||||||||||||| |||||  | |||||| |||||||| |||||    
T  19008178 gccaatttaagtttatgtttcaattatctttgaattagcaagaccccgcacgtaaggatcaccgtccgatcagcaggtgcagttagc 19008264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 217 - 278
Target Start/End: Original strand, 24243628 - 24243689
Alignment:
Q  217 tggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaag 278  Q
    |||||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||    
T  24243628 tggaatgccaatttaagtttatatttcaattacctttgaattagcaagaccccgcacgtaag 24243689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 223 - 313
Target Start/End: Original strand, 15375555 - 15375645
Alignment:
Q  223 gccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    |||||||||||| | | ||| ||||||| ||||  ||||||||||||||||||||| |||||  ||||||||||||||||| |||||||||    
T  15375555 gccaatttaagtttatttttaaattaccattgatatagcaagaccccgcacgtaaggatcaccgtgcgatcatcaggtgcagttagccatc 15375645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 223 - 313
Target Start/End: Complemental strand, 24140913 - 24140823
Alignment:
Q  223 gccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    |||||||||||| | | ||||||||| |||||||||||||||||||| |||||||| |||||  || ||||| |||||||| |||||||||    
T  24140913 gccaatttaagtttatctttcaattagctttgaattagcaagaccccacacgtaaggatcaccgtgtgatcagcaggtgcagttagccatc 24140823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 34488407 - 34488322
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaacaag 103  Q
    ||||| ||||||| |||||||||||| |||||| | |||||| || |||||||||||||||||||| ||||||||||||| ||||||    
T  34488407 agtaaatacttaggaggtgacattactaatattcagtaaaatctgctgaacctaggatgtaactag-ttattaattagggaaacaag 34488322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 224 - 313
Target Start/End: Original strand, 20549340 - 20549429
Alignment:
Q  224 ccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    ||||||||||| | |||||| |||||| |||||||||||||||||| |||||||| |||||| ||||||||  | ||||| |||||||||    
T  20549340 ccaatttaagtttatgtttcgattacccttgaattagcaagaccccacacgtaaggatcactgtgcgatcaataagtgcagttagccatc 20549429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 225 - 313
Target Start/End: Complemental strand, 17432311 - 17432223
Alignment:
Q  225 caatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    |||||||||| | || |||||||||||||||||||||||||||||||||||| | ||||   |||||||| | |||||| |||||||||    
T  17432311 caatttaagtttatgcttcaattacctttgaattagcaagaccccgcacgtatggatcatcgtgcgatcaactggtgcagttagccatc 17432223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 313
Target Start/End: Original strand, 24265032 - 24265160
Alignment:
Q  185 agaacactggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcac 284  Q
    |||||| ||||||||||| |||||| |||  | ||||||| ||||||||| | ||||||||||||| ||||||||| || |||| ||||||||| |||||    
T  24265032 agaacattggccttcattgcctttggaaacataggaatgcaaatttaagtatatgtttcaattaccattgaattagaaaaaccctgcacgtaagaatcac 24265131  T
Q  285 tatgcgatcatcaggtgcaattagccatc 313  Q
      | | | || |||||||| |||||||||    
T  24265132 cgtccaagcagcaggtgcagttagccatc 24265160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 313
Target Start/End: Original strand, 24341663 - 24341791
Alignment:
Q  185 agaacactggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcac 284  Q
    |||||| ||||||||||| |||||| |||  | ||||||| ||||||||| | ||||||||||||| ||||||||| || |||| ||||||||| |||||    
T  24341663 agaacattggccttcattgcctttggaaacataggaatgcaaatttaagtatatgtttcaattaccattgaattagaaaaaccctgcacgtaagaatcac 24341762  T
Q  285 tatgcgatcatcaggtgcaattagccatc 313  Q
      | | | || |||||||| |||||||||    
T  24341763 cgtccaagcagcaggtgcagttagccatc 24341791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 24661902 - 24661985
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaaca 101  Q
    ||||||||||||| |||||||||||| |||||||| |||||| || | || ||||||||||||||| ||||||||||||| ||||    
T  24661902 agtaagtacttaggaggtgacattactaatattgagtaaaatctgctaaatctaggatgtaactag-ttattaattagggaaaca 24661985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 238 - 313
Target Start/End: Complemental strand, 34129054 - 34128979
Alignment:
Q  238 tgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||  ||||| || || ||||| |||||||||    
T  34129054 tgtttcaattacctttgaattagcaagaccccgcacataaggatcaccgtgcgaccagcaagtgcagttagccatc 34128979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 218 - 312
Target Start/End: Original strand, 17314727 - 17314821
Alignment:
Q  218 ggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccat 312  Q
    |||| |||||||||||| | ||| |||||||||||||||||| |||||||||||| ||||| ||||   |||||||| ||||||||  |||||||    
T  17314727 ggaaagccaatttaagtttatgtctcaattacctttgaattaacaagaccccgcatgtaaggatcatcgtgcgatcagcaggtgcagctagccat 17314821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 18207588 - 18207673
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaacaag 103  Q
    ||||||||||||| |||||||||||  |||||||| |||||| || | |||||| ||||||||||| ||||||||||||| ||||||    
T  18207588 agtaagtacttaggaggtgacattattaatattgagtaaaatctgctaaacctaagatgtaactag-ttattaattagggaaacaag 18207673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 192 - 313
Target Start/End: Original strand, 20744235 - 20744356
Alignment:
Q  192 tggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcga 291  Q
    ||||||||||| |||| | |||   ||||| | |||||||||| | |||||||||||||||||||||| ||||||||| |||||||  |||||  |||||    
T  20744235 tggccttcattgccttgggaaaaactggaacgtcaatttaagtttatgtttcaattacctttgaattaacaagaccccacacgtaacgatcaccgtgcga 20744334  T
Q  292 tcatcaggtgcaattagccatc 313  Q
    |||  ||||| | |||||||||    
T  20744335 tcagaaggtgtagttagccatc 20744356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 277
Target Start/End: Original strand, 24266520 - 24266611
Alignment:
Q  186 gaacactggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaa 277  Q
    ||||| ||||||| ||| |||||  |||||| |||||| |||||||||||| ||||||||||||||||||  ||| ||||||| ||| ||||    
T  24266520 gaacattggcctttattgccttttgaaatctaggaatgtcaatttaagtctatgtttcaattacctttgaggtagtaagaccctgcatgtaa 24266611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 277
Target Start/End: Original strand, 24343151 - 24343242
Alignment:
Q  186 gaacactggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaa 277  Q
    ||||| ||||||| ||| |||||  |||||| |||||| |||||||||||| ||||||||||||||||||  ||| ||||||| ||| ||||    
T  24343151 gaacattggcctttattgccttttgaaatctaggaatgtcaatttaagtctatgtttcaattacctttgaggtagtaagaccctgcatgtaa 24343242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 25401655 - 25401722
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtt 84  Q
    ||||||||||||| |||||||||||| |||||||| ||||||||| | ||||||||| ||| ||||||    
T  25401655 agtaagtacttaggaggtgacattactaatattgagtaaaatttgctaaacctaggaggtagctagtt 25401722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 93
Target Start/End: Original strand, 24266337 - 24266398
Alignment:
Q  31 aggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaatta 93  Q
    |||||||||||| |||||||| |||||| || | |||||||||||||||||| ||||||||||    
T  24266337 aggtgacattactaatattgagtaaaatatgctaaacctaggatgtaactag-ttattaatta 24266398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 93
Target Start/End: Original strand, 24342968 - 24343029
Alignment:
Q  31 aggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaatta 93  Q
    |||||||||||| |||||||| |||||| || | |||||||||||||||||| ||||||||||    
T  24342968 aggtgacattactaatattgagtaaaatatgctaaacctaggatgtaactag-ttattaatta 24343029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 304
Target Start/End: Complemental strand, 36175668 - 36175550
Alignment:
Q  186 gaacactggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcact 285  Q
    ||||| |||||||||||  |||||||||||| | || | |||||||||||| |||||||||||  ||| |   || ||||||| ||||||||| |||||     
T  36175668 gaacattggccttcattgtctttgaaaatctagaaacgtcaatttaagtctatgtttcaattattttttagagagtaagaccctgcacgtaaggatcaca 36175569  T
Q  286 atgcgatcatcaggtgcaa 304  Q
     |||||||| || ||||||    
T  36175568 gtgcgatcagcaagtgcaa 36175550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 308
Target Start/End: Complemental strand, 20859149 - 20859066
Alignment:
Q  225 caatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattag 308  Q
    ||||| |||| | ||||||||||||||||||||||| ||||||   |||||||| |||||  ||||||||  ||||||| ||||    
T  20859149 caattaaagtttatgtttcaattacctttgaattagtaagaccagacacgtaaggatcaccgtgcgatcagtaggtgcagttag 20859066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 17470604 - 17470689
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaacaag 103  Q
    ||||||| ||||| ||||  |||||  |||||||| |||||| ||||||| ||||||||||||||  |||||||||| || ||||||    
T  17470604 agtaagtgcttaggaggttgcattattaatattgagtaaaatatgttgaatctaggatgtaacta-attattaattaaggaaacaag 17470689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 284
Target Start/End: Original strand, 25401868 - 25401998
Alignment:
Q  156 cctaagattcatagatgtgttgtcctacaagaacactggccttcatttcctttgaaaatcttggaatgccaatttaa-gtctttg-tttcaattaccttt 253  Q
    ||||||||||||||||| || | |||||| || |  ||||||||||| |||| | |||| ||||||  ||||| ||| |||| || ||||||||||||||    
T  25401868 cctaagattcatagatgggtagacctacatgatccttggccttcattgccttggtaaatattggaaatccaatataatgtctatgctttcaattaccttt 25401967  T
Q  254 gaattagcaagaccccgcacgtaagcatcac 284  Q
    ||  | | |||||||| |||||||| |||||    
T  25401968 gaggtggtaagaccccacacgtaaggatcac 25401998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 276
Target Start/End: Complemental strand, 28665225 - 28665187
Alignment:
Q  238 tgtttcaattacctttgaattagcaagaccccgcacgta 276  Q
    ||||||||| ||||||||||||||||||||| |||||||    
T  28665225 tgtttcaataacctttgaattagcaagaccctgcacgta 28665187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 22871431 - 22871366
Alignment:
Q  19 taagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtt 84  Q
    |||||||||  || ||||||| ||  ||||||| |||||| | |||||||||||||||||||||||    
T  22871431 taagtacttcaaatgtgacataacttatattgattaaaatctattgaacctaggatgtaactagtt 22871366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 256
Target Start/End: Original strand, 24167104 - 24167156
Alignment:
Q  204 cctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttgaa 256  Q
    |||||| |||| | |||||||||| |||||||| |||||||||||||| ||||    
T  24167104 cctttggaaatttaggaatgccaacttaagtctatgtttcaattacctctgaa 24167156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 67; Significance: 9e-30; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 179 - 313
Target Start/End: Original strand, 167853 - 167987
Alignment:
Q  179 cctacaagaacactggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaag 278  Q
    |||||||||||| ||||| ||||| |||||| ||||||||||| ||||||| |||||| ||||| |||||||||||||||||||||||||||||  ||||    
T  167853 cctacaagaacattggccctcattccctttggaaatcttggaacgccaattcaagtctatgttttaattacctttgaattagcaagaccccgcatataag 167952  T
Q  279 catcactatgcgatcatcaggtgcaattagccatc 313  Q
     ||||   ||||||||  ||||||| |||||||||    
T  167953 gatcatcgtgcgatcagtaggtgcagttagccatc 167987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 123
Target Start/End: Original strand, 167751 - 167856
Alignment:
Q  18 gtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaacaagcaccaaggggaata 117  Q
    |||||||||||| |||||||||||| | |||||| |||||| |  ||||  ||||||||||||| |||||||||| ||| |||||| ||||| ||| |||    
T  167751 gtaagtacttaggaggtgacattactattattgagtaaaatctactgaatgtaggatgtaactaatttattaattggggaaacaagtaccaacgggtata 167850  T
Q  118 aaccta 123  Q
    ||||||    
T  167851 aaccta 167856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 244787 - 244854
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtt 84  Q
    ||||||||||||| | |||||||||| |||||||| ||||||  | ||||||||||||||||||||||    
T  244787 agtaagtacttaggaagtgacattactaatattgagtaaaatccgctgaacctaggatgtaactagtt 244854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 9e-27; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 192 - 313
Target Start/End: Complemental strand, 12411609 - 12411488
Alignment:
Q  192 tggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcga 291  Q
    ||||||||||| |||| |||||   ||||| ||||| |||||| | |||||||||||||||||||||||||||||| |||||||||| ||||||| ||||    
T  12411609 tggccttcattgccttggaaaaaactggaaagccaaattaagtttatgtttcaattacctttgaattagcaagacctcgcacgtaaggatcactacgcga 12411510  T
Q  292 tcatcaggtgcaattagccatc 313  Q
    ||| |||||||| || ||||||    
T  12411509 tcagcaggtgcagttggccatc 12411488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 158 - 313
Target Start/End: Complemental strand, 17156354 - 17156199
Alignment:
Q  158 taagattcatagatgtgttgtcctacaagaacactggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttgaat 257  Q
    ||||||||||||||| |    ||| |||||||| ||||||||||| |||||| |||||  |||| |||||| ||||||| | ||||||||||||||||||    
T  17156354 taagattcatagatgggaaaaccttcaagaacattggccttcattgcctttggaaatcgaggaacgccaatgtaagtctatctttcaattacctttgaat 17156255  T
Q  258 tagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    ||| ||||||||||| ||||| |||||  |||||||| || ||| | |||||||||    
T  17156254 taggaagaccccgcatgtaaggatcaccttgcgatcaacaagtgtatttagccatc 17156199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 183 - 294
Target Start/End: Original strand, 2723403 - 2723514
Alignment:
Q  183 caagaacactggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatc 282  Q
    |||||||| || | |||||| |||||| |||||| ||||||||||||||||||| ||||||||||||||||||||| | ||||| || |||||||  |||    
T  2723403 caagaacattgactttcattgcctttggaaatctaggaatgccaatttaagtctatgtttcaattacctttgaattggtaagacgccacacgtaacgatc 2723502  T
Q  283 actatgcgatca 294  Q
    ||  ||||||||    
T  2723503 accgtgcgatca 2723514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 238 - 313
Target Start/End: Complemental strand, 4650688 - 4650613
Alignment:
Q  238 tgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||  |||||||| |||||||| |||||||||    
T  4650688 tgtttcaattacctttgaattaccaagaccccgcacgtaaggatcaccgtgcgatcaacaggtgcagttagccatc 4650613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 20 - 111
Target Start/End: Original strand, 12805497 - 12805586
Alignment:
Q  20 aagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaacaagcaccaagg 111  Q
    |||||||||||||||||||||||||||||||| |||||| || |||||||| |||||||| || ||||||||||||| |||||| |||||||    
T  12805497 aagtacttagaaggtgacattacaaatattgagtaaaatctggtgaacctatgatgtaacgag-ttattaattaggg-aacaagtaccaagg 12805586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 156 - 284
Target Start/End: Complemental strand, 21302485 - 21302356
Alignment:
Q  156 cctaagattcatagatgtgttgtcctacaagaacactggccttcatttcctttgaaaatcttggaatgccaatttaagtctttg-tttcaattacctttg 254  Q
    ||||||||||||||||| |  | |||||||||||  ||||||||| | |||| ||||||||||||| |||||||||||||| || ||||||||||||| |    
T  21302485 cctaagattcatagatgggaagacctacaagaaccttggccttcactgccttggaaaatcttggaaagccaatttaagtctatgctttcaattaccttag 21302386  T
Q  255 aattagcaagaccccgcacgtaagcatcac 284  Q
    |  | | |||||||| |||||||| |||||    
T  21302385 agatggtaagaccccacacgtaaggatcac 21302356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 84
Target Start/End: Complemental strand, 41509243 - 41509170
Alignment:
Q  11 cataggagtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtt 84  Q
    ||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||| ||||| |||| |||||    
T  41509243 catagtagtaagtacttaggaggtgacattactaatattgaataaaatttgttgaacataggaggtaattagtt 41509170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 217 - 313
Target Start/End: Complemental strand, 19167881 - 19167785
Alignment:
Q  217 tggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    ||||| |||||||||||| | ||||| | |||||||||||||||||||||| | |||||||| |||||  |||||||| |||||||| |||||||||    
T  19167881 tggaaagccaatttaagtttatgttttagttacctttgaattagcaagaccacacacgtaaggatcaccgtgcgatcaacaggtgcagttagccatc 19167785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 223 - 313
Target Start/End: Original strand, 20023173 - 20023263
Alignment:
Q  223 gccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    |||||||||||| | |||||||||||||||||||||||||||||||||||| |||| |||||  ||| |||| || ||| | |||||||||    
T  20023173 gccaatttaagtttatgtttcaattacctttgaattagcaagaccccgcacataagaatcaccgtgcaatcaacaagtgaagttagccatc 20023263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 82
Target Start/End: Original strand, 12373291 - 12373356
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactag 82  Q
    |||||||||||||||||||||||||| |||||||| |||||| ||||||||||| || ||||||||    
T  12373291 agtaagtacttagaaggtgacattactaatattgagtaaaatatgttgaacctatgacgtaactag 12373356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 2166992 - 2167059
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtt 84  Q
    ||||||||||||  |||||||||||| |||||||| ||||||||| ||||||||||| ||||||||||    
T  2166992 agtaagtacttaagaggtgacattactaatattgactaaaatttgctgaacctaggaggtaactagtt 2167059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 16245046 - 16245113
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtt 84  Q
    ||||||||||||| |||||||||||| |||||||| |||||| || ||||||||||| ||||||||||    
T  16245046 agtaagtacttaggaggtgacattactaatattgagtaaaatatgctgaacctaggaggtaactagtt 16245113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 192 - 278
Target Start/End: Original strand, 16229610 - 16229696
Alignment:
Q  192 tggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaag 278  Q
    |||||||||||||||| | |||   ||||| |||||||||| | | |||||||||||||||||||||||||||||||| || |||||    
T  16229610 tggccttcatttccttgggaaacactggaaagccaatttaaatttatgtttcaattacctttgaattagcaagaccccacatgtaag 16229696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 21326114 - 21326048
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagt 83  Q
    ||||||||||||| |||||||||||  |||||||| |||||| || |||||||||||||||||||||    
T  21326114 agtaagtacttaggaggtgacattattaatattgagtaaaatatgctgaacctaggatgtaactagt 21326048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 184 - 285
Target Start/End: Complemental strand, 8144151 - 8144050
Alignment:
Q  184 aagaacactggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatca 283  Q
    |||||||||||| |||||| || ||| |||| | ||||| ||||||||||||| ||||||||||||||||||   || |||||| | |||||||| ||||    
T  8144151 aagaacactggctttcattgcccttggaaatttaggaattccaatttaagtctatgtttcaattacctttgagagagtaagacctcacacgtaaggatca 8144052  T
Q  284 ct 285  Q
    ||    
T  8144051 ct 8144050  T

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Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 192 - 273
Target Start/End: Complemental strand, 8170357 - 8170276
Alignment:
Q  192 tggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcac 273  Q
    ||||||||||| |||| | |||   ||||| || ||||||||| | ||||||||||||||||||||||||||||||||||||    
T  8170357 tggccttcattgccttggtaaacactggaaagcaaatttaagtttatgtttcaattacctttgaattagcaagaccccgcac 8170276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 8267715 - 8267619
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaacaagcaccaagggga 114  Q
    ||||| || |||| |||| ||||||| |||||| | |||||| ||||||||||| ||||||||| | ||||||||||||| |||||| ||||||||||    
T  8267715 agtaaatatttaggaggtcacattactaatatttagtaaaatctgttgaacctatgatgtaactcg-ttattaattagggaaacaagtaccaagggga 8267619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 206 - 283
Target Start/End: Complemental strand, 8446336 - 8446259
Alignment:
Q  206 tttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatca 283  Q
    ||||||||| | ||||||||||||||||||| ||||||||||||||||||   || |||||||| |||||||| ||||    
T  8446336 tttgaaaatttaggaatgccaatttaagtctatgtttcaattacctttgagggagtaagaccccacacgtaaggatca 8446259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 5509111 - 5509044
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtt 84  Q
    ||||||||||||| |||||||||||| |||||||| |||||| || ||||||||| | ||||||||||    
T  5509111 agtaagtacttaggaggtgacattactaatattgagtaaaatctgctgaacctagaaggtaactagtt 5509044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 222 - 309
Target Start/End: Complemental strand, 19908811 - 19908724
Alignment:
Q  222 tgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagc 309  Q
    ||||||||||||| | | ||||||||||||||||||||  ||||||||||||||||| ||||  ||| |||||  ||||||| |||||    
T  19908811 tgccaatttaagtttatctttcaattacctttgaattacaaagaccccgcacgtaaggatcatcatgtgatcagtaggtgcagttagc 19908724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 31285300 - 31285367
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtt 84  Q
    ||||||||||||  || ||||||||| |||||||| |||||| |||| ||||||||||||||||||||    
T  31285300 agtaagtacttatgagatgacattactaatattgagtaaaatctgttaaacctaggatgtaactagtt 31285367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 23756473 - 23756559
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaacaag 103  Q
    ||||| ||| ||| ||| ||| |||| |||||||| |||| |||||||||||||| |||||||||||| |||||||| || ||||||    
T  23756473 agtaaatacataggaggcgactttactaatattgagtaaattttgttgaacctagaatgtaactagttaattaattaaggaaacaag 23756559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 284
Target Start/End: Complemental strand, 8319455 - 8319402
Alignment:
Q  231 aagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcac 284  Q
    |||||| |||||||||||||||||||||||||||| || ||||||||| |||||    
T  8319455 aagtctatgtttcaattacctttgaattagcaagatcctgcacgtaaggatcac 8319402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 84
Target Start/End: Complemental strand, 20430526 - 20430453
Alignment:
Q  11 cataggagtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtt 84  Q
    ||||| ||||||||||||| |||||||||||| |||| | | |||||||||||| |||||||| |||| |||||    
T  20430526 catagtagtaagtacttaggaggtgacattactaatactaagtaaaatttgttgtacctaggaggtaattagtt 20430453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 231 - 303
Target Start/End: Complemental strand, 8267340 - 8267268
Alignment:
Q  231 aagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgca 303  Q
    |||||| |||||||||||||||||||||||||||| || ||||||||  |||||  |||||||| | ||||||    
T  8267340 aagtctatgtttcaattacctttgaattagcaagatcctgcacgtaaagatcaccttgcgatcagcgggtgca 8267268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 255
Target Start/End: Complemental strand, 21325877 - 21325807
Alignment:
Q  186 gaacactggccttcatttcctttgaaaatcttggaatgccaat-ttaagtctttgtttcaattacctttga 255  Q
    ||||| ||| ||||||| ||||||||||| | ||||||||||| | |||||| ||||||||||||||||||    
T  21325877 gaacattggtcttcattgcctttgaaaatttaggaatgccaatataaagtctatgtttcaattacctttga 21325807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 311
Target Start/End: Original strand, 8882768 - 8882841
Alignment:
Q  238 tgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagcca 311  Q
    |||| ||||||||||| ||| |||||||| ||||||||||| |||| | ||||||||  ||||||| |||||||    
T  8882768 tgttacaattacctttaaataagcaagacgccgcacgtaaggatcattgtgcgatcagtaggtgcagttagcca 8882841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 23700303 - 23700352
Alignment:
Q  44 aatattgaataaaatttgttgaacctaggatgtaactagtttattaatta 93  Q
    |||||||| ||||||||||||||| ||| |||||||||||| ||||||||    
T  23700303 aatattgagtaaaatttgttgaacttagaatgtaactagttaattaatta 23700352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 23718758 - 23718807
Alignment:
Q  44 aatattgaataaaatttgttgaacctaggatgtaactagtttattaatta 93  Q
    |||||||| ||||||||||||||| ||| |||||||||||| ||||||||    
T  23718758 aatattgagtaaaatttgttgaacttagaatgtaactagttaattaatta 23718807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 23737214 - 23737263
Alignment:
Q  44 aatattgaataaaatttgttgaacctaggatgtaactagtttattaatta 93  Q
    |||||||| ||||||||||||||| ||| |||||||||||| ||||||||    
T  23737214 aatattgagtaaaatttgttgaacttagaatgtaactagttaattaatta 23737263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 277
Target Start/End: Original strand, 3116011 - 3116071
Alignment:
Q  217 tggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaa 277  Q
    ||||| ||||||||||||   || ||||||||||||||||||| ||||||||| |||||||    
T  3116011 tggaaggccaatttaagttcatgcttcaattacctttgaattaacaagaccccacacgtaa 3116071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 228
Target Start/End: Original strand, 19171394 - 19171466
Alignment:
Q  156 cctaagattcatagatgtgttgtcctacaagaacactggccttcatttcctttgaaaatcttggaatgccaat 228  Q
    ||||||||||||||| | || | |||||||||||  ||||||||||| |||| |||||| |||||| ||||||    
T  19171394 cctaagattcatagaagggtagacctacaagaaccttggccttcattgccttggaaaatattggaaagccaat 19171466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 103
Target Start/End: Original strand, 2723179 - 2723263
Alignment:
Q  18 gtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtttattaattagggcaacaag 103  Q
    |||||||||||| |||||||||||  |||||||| || ||| || ||||| || |||||||| || |||||||||| || ||||||    
T  2723179 gtaagtacttaggaggtgacattatcaatattgagtataatctgctgaacttatgatgtaacaag-ttattaattacggaaacaag 2723263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 9781234 - 9781287
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaaccta 70  Q
    ||||||||||||| |||||||||||| ||||  || |||||| |||||||||||    
T  9781234 agtaagtacttaggaggtgacattactaataccgagtaaaatatgttgaaccta 9781287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 255
Target Start/End: Original strand, 21825389 - 21825458
Alignment:
Q  186 gaacactggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttga 255  Q
    |||||||| |||||||| ||| || |||| |  ||||| ||| |||||||| ||||||||||||||||||    
T  21825389 gaacactgaccttcattgcctatggaaatttatgaatgtcaagttaagtctatgtttcaattacctttga 21825458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 81
Target Start/End: Complemental strand, 22246059 - 22245999
Alignment:
Q  21 agtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaacta 81  Q
    ||||| ||| ||||||||| || |||||||| |||||| ||||||| | ||||||||||||    
T  22246059 agtacataggaggtgacataactaatattgagtaaaatctgttgaaaccaggatgtaacta 22245999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 217 - 313
Target Start/End: Complemental strand, 76890 - 76794
Alignment:
Q  217 tggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    ||||| |||||||||||||| |||||||||||| |||||||||||||||||||| ||||||| |||||  |||||||| |||||||| |||||||||    
T  76890 tggaaagccaatttaagtctatgtttcaattacttttgaattagcaagaccccgtacgtaaggatcaccgtgcgatcagcaggtgcagttagccatc 76794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 223 - 313
Target Start/End: Complemental strand, 909 - 819
Alignment:
Q  223 gccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    |||||||||||| | ||||||||||||||||||| ||||||||||||||||||||| ||||   |||||||| |||||||| |||||||||    
T  909 gccaatttaagtttatgtttcaattacctttgaactagcaagaccccgcacgtaaggatcatcgtgcgatcagcaggtgcagttagccatc 819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 192 - 312
Target Start/End: Complemental strand, 70369 - 70249
Alignment:
Q  192 tggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcga 291  Q
    ||||||||||| |||| | |||   ||||| |||||||||||| |  | ||||||| | ||||||||||||||||||||||| |||| ||||||||||||    
T  70369 tggccttcattgccttaggaaacactggaaagccaatttaagtttacgcttcaattgcatttgaattagcaagaccccgcacataaggatcactatgcga 70270  T
Q  292 tcatcaggtgcaattagccat 312  Q
    ||| |||||||| ||||||||    
T  70269 tcagcaggtgcacttagccat 70249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 219 - 313
Target Start/End: Complemental strand, 72534 - 72440
Alignment:
Q  219 gaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    |||||||||||||| | | ||||||||||||||||||| || |||||||||||||||||| |||||| |||||||| | ||| |||||| |||||    
T  72534 gaatgccaatttaattttatgtttcaattacctttgaaataacaagaccccgcacgtaagaatcactgtgcgatcagcgggtccaattacccatc 72440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1869 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold1869
Description:

Target: scaffold1869; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 192 - 313
Target Start/End: Original strand, 23 - 144
Alignment:
Q  192 tggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcga 291  Q
    |||||||||||||||| | |||   | ||| || ||||||||| | |||||||||||| |||||||||| ||||||  ||||||||| ||||| ||||||    
T  23 tggccttcatttccttgggaaacacttgaaagctaatttaagtttatgtttcaattacgtttgaattagaaagaccttgcacgtaaggatcaccatgcga 122  T
Q  292 tcatcaggtgcaattagccatc 313  Q
    | | |||||||| |||||||||    
T  123 tgagcaggtgcatttagccatc 144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 225 - 313
Target Start/End: Complemental strand, 51292 - 51204
Alignment:
Q  225 caatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    |||||||||| | ||||||||||| |||||||||| ||||||||| ||| |||| |||||  |||||||| || |||||||||||||||    
T  51292 caatttaagtatatgtttcaattaactttgaattaacaagaccccacacataaggatcaccgtgcgatcaacaagtgcaattagccatc 51204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 192 - 284
Target Start/End: Complemental strand, 26344 - 26252
Alignment:
Q  192 tggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcac 284  Q
    |||||||||||||||| | |||   |||||||||||||||||| | |||||||||||||||| ||||| ||||||| ||||| |||| |||||    
T  26344 tggccttcatttccttgggaaaaactggaatgccaatttaagtttatgtttcaattacctttaaattaacaagacctcgcacataaggatcac 26252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 156 - 313
Target Start/End: Complemental strand, 40151 - 39994
Alignment:
Q  156 cctaagattcatagatgtgttgtcctacaagaacactggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttga 255  Q
    ||||||||||||||||| |  | ||| || ||||| ||  ||||||| |||| | ||| || |||| |||||||||||| | ||| |||||||| ||| |    
T  40151 cctaagattcatagatgggaagaccttcaggaacattgatcttcattgccttcggaaacctaggaacgccaatttaagtttatgtgtcaattacatttca 40052  T
Q  256 attagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    ||| |||||||||||||| |||| ||||   |||||||| ||||| || |||||||||    
T  40051 atttgcaagaccccgcacataaggatcatcgtgcgatcagcaggtacagttagccatc 39994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 154
Target Start/End: Complemental strand, 40310 - 40241
Alignment:
Q  84 ttattaattagggcaacaagcaccaaggggaataaacctaagtaagaccattgtcctcgacctctaggtaa 154  Q
    ||||||||||||  ||||||||||||||||| | ||||| |||  ||||||||| |||||||||| |||||    
T  40310 ttattaattaggaaaacaagcaccaaggggagtgaacct-agtgtgaccattgtgctcgacctcttggtaa 40241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 217 - 285
Target Start/End: Original strand, 96423 - 96491
Alignment:
Q  217 tggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcact 285  Q
    ||||| |||||||||||||| | |||||||||||||||||||| ||||||||||||  |||| ||||||    
T  96423 tggaacgccaatttaagtctatatttcaattacctttgaattaacaagaccccgcatataaggatcact 96491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 255
Target Start/End: Complemental strand, 4146 - 4045
Alignment:
Q  156 cctaagattcatagatgtgttgtcctacaagaacactggccttcatttcctttgaaaatcttggaatgccaat-ttaagtctttg-tttcaattaccttt 253  Q
    ||||| ||||||||||| || | ||||| ||||| ||||||||||||| ||| ||||||||||||| | |||| | |||||| || ||||||||||||||    
T  4146 cctaaaattcatagatgggtggacctactagaaccctggccttcattttcttggaaaatcttggaaagacaatataaagtctatgctttcaattaccttt 4047  T
Q  254 ga 255  Q
    ||    
T  4046 ga 4045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 303
Target Start/End: Complemental strand, 21727 - 21662
Alignment:
Q  238 tgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgca 303  Q
    ||||||||||||||||||||||||||||||| | ||||||| ||||   |||||||| ||||||||    
T  21727 tgtttcaattacctttgaattagcaagaccctgtacgtaaggatcatcgtgcgatcagcaggtgca 21662  T

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Target: scaffold0032 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 313
Target Start/End: Original strand, 103818 - 103914
Alignment:
Q  217 tggaatgccaatttaagtctttgtttcaattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    ||||| |||||||||||| | | ||||||||||||||||||||||| ||||||||| | ||| |||||  |||||| | || ||| | |||||||||    
T  103818 tggaaagccaatttaagtttatatttcaattacctttgaattagcacgaccccgcatgcaaggatcaccgtgcgattagcaagtgtagttagccatc 103914  T

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Target: scaffold0263 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 16058 - 15989
Alignment:
Q  244 aattacctttgaattagcaagaccccgcacgtaagcatcactatgcgatcatcaggtgcaattagccatc 313  Q
    |||||||||||||||||||| |||| ||||||||| | |||  |||||||| || ||||| |||||||||    
T  16058 aattacctttgaattagcaaaaccctgcacgtaaggaccaccgtgcgatcaacatgtgcagttagccatc 15989  T

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Target: scaffold0263; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 259
Target Start/End: Original strand, 17381 - 17415
Alignment:
Q  225 caatttaagtctttgtttcaattacctttgaatta 259  Q
    |||||||||||| ||||||||||||||||||||||    
T  17381 caatttaagtctatgtttcaattacctttgaatta 17415  T

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Target: scaffold0622 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 255
Target Start/End: Original strand, 1224 - 1294
Alignment:
Q  186 gaacactggccttcatttcctttgaaaatcttggaatgccaatttaa-gtctttgtttcaattacctttga 255  Q
    ||||| ||||||| ||| |||||| |||| | ||||||||||| ||| |||| ||||||||||||||||||    
T  1224 gaacattggccttaattgcctttggaaatttaggaatgccaatataaagtctatgtttcaattacctttga 1294  T

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Target: scaffold0043 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 89185 - 89247
Alignment:
Q  23 tacttagaaggtgacattacaaatattgaataaaatt-tgttgaacctaggatgtaactagtt 84  Q
    ||||||| |||||||||||  |||||||| ||||||| ||| ||| |||||||||||||||||    
T  89185 tacttaggaggtgacattattaatattgagtaaaattatgtcgaatctaggatgtaactagtt 89247  T

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Target: scaffold0043; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 255
Target Start/End: Original strand, 89417 - 89486
Alignment:
Q  186 gaacactggccttcatttcctttgaaaatcttggaatgccaatttaagtctttgtttcaattacctttga 255  Q
    ||||||| ||||||||| ||||||||||| | | ||  ||||||||||| | ||||| ||||||||||||    
T  89417 gaacactagccttcattacctttgaaaatttagaaaatccaatttaagtttatgtttgaattacctttga 89486  T

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Target: scaffold0001 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 81374 - 81308
Alignment:
Q  18 gtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaacctaggatgtaactagtt 84  Q
    |||| |||||||||||||||||||| |||||||| |||||| || | || ||| || ||||||||||    
T  81374 gtaattacttagaaggtgacattactaatattgagtaaaatctgctaaatctatgaggtaactagtt 81308  T

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Target: scaffold0386 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 6984 - 7037
Alignment:
Q  17 agtaagtacttagaaggtgacattacaaatattgaataaaatttgttgaaccta 70  Q
    |||| |||||||| || ||||||||| |||||||| |||||| |||||||||||    
T  6984 agtatgtacttaggagttgacattactaatattgagtaaaatctgttgaaccta 7037  T

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Target: scaffold0386; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 70
Target Start/End: Original strand, 10020 - 10057
Alignment:
Q  33 gtgacattacaaatattgaataaaatttgttgaaccta 70  Q
    |||||||||| |||||||| ||||||||||||||||||    
T  10020 gtgacattactaatattgagtaaaatttgttgaaccta 10057  T

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