View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1773_low_131 (Length: 274)
Name: NF1773_low_131
Description: NF1773
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1773_low_131 |
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Alignment Details
Target: chr7 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 932869 - 933124
Alignment:
| Q |
1 |
tagcttagaaatgtcaattcttatgtgtactgtatgtagggtgtgatttttaaatgtagtgttggaagaatgtctgcatgaaatccgtgacaatggtcac |
100 |
Q |
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| T |
932869 |
tagcttagaaatgtcaatttttatgtgtactgtatgtagggtgtgatttttaaatgtagtgttggaagaatgtctgcatgaaatccgtgacaatggtccc |
932968 |
T |
|
| Q |
101 |
cacnnnnnnncgagaagataattgaactatatgaaaccttaagataaaatgattgtggtagaaatttgaaggnnnnnnncgtagatttcataggatatga |
200 |
Q |
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| T |
932969 |
cacaaaaaaacgagaagataattgaactatatgaaaccttaagataaaatgattgtggtagaaatttgaagaaaaaaaacgtagatttcataggatatga |
933068 |
T |
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| Q |
201 |
tctaatgcacagtaaatagaagtgctacatatataatttgaactagataccttgtc |
256 |
Q |
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| T |
933069 |
tctaatgcacagtaaatagaagtgctacatatataatttgaactagataccttgtc |
933124 |
T |
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