View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1773_low_154 (Length: 238)

Name: NF1773_low_154
Description: NF1773
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1773_low_154
NF1773_low_154
[»] chr4 (60 HSPs)
chr4 (18-214)||(1226211-1226407)
chr4 (18-214)||(14330653-14330849)
chr4 (18-214)||(45939577-45939774)
chr4 (18-214)||(21711582-21711778)
chr4 (18-214)||(25762650-25762846)
chr4 (18-214)||(27759379-27759575)
chr4 (17-209)||(32937866-32938058)
chr4 (20-214)||(49064033-49064227)
chr4 (18-214)||(51027726-51027922)
chr4 (18-214)||(51428151-51428347)
chr4 (18-209)||(21017141-21017332)
chr4 (18-209)||(40353737-40353928)
chr4 (17-214)||(20901627-20901824)
chr4 (21-214)||(33163503-33163696)
chr4 (18-209)||(55796795-55796986)
chr4 (20-213)||(1042803-1042996)
chr4 (20-213)||(39588983-39589176)
chr4 (18-209)||(20778833-20779024)
chr4 (18-209)||(28082290-28082481)
chr4 (17-211)||(31824591-31824785)
chr4 (18-206)||(41794529-41794717)
chr4 (20-213)||(9489733-9489925)
chr4 (18-206)||(6177282-6177470)
chr4 (18-206)||(56138962-56139150)
chr4 (19-214)||(242375-242570)
chr4 (18-214)||(37866458-37866655)
chr4 (18-214)||(46816484-46816678)
chr4 (18-206)||(49094797-49094985)
chr4 (18-172)||(22436963-22437117)
chr4 (20-172)||(34529797-34529949)
chr4 (18-172)||(957456-957610)
chr4 (18-175)||(6282321-6282478)
chr4 (18-172)||(43889500-43889654)
chr4 (18-172)||(47657356-47657510)
chr4 (20-172)||(26591686-26591838)
chr4 (18-169)||(2773061-2773212)
chr4 (17-211)||(18412646-18412839)
chr4 (22-172)||(49791937-49792087)
chr4 (18-171)||(34153288-34153441)
chr4 (17-211)||(17211317-17211511)
chr4 (17-212)||(10312323-10312517)
chr4 (18-209)||(21169503-21169697)
chr4 (22-209)||(24606808-24606995)
chr4 (21-172)||(49817645-49817796)
chr4 (18-212)||(3393356-3393549)
chr4 (17-171)||(11288346-11288499)
chr4 (18-172)||(42886318-42886472)
chr4 (18-172)||(49423759-49423913)
chr4 (19-172)||(4785423-4785576)
chr4 (22-172)||(36776520-36776670)
chr4 (17-172)||(44560181-44560336)
chr4 (17-213)||(31324225-31324420)
chr4 (17-214)||(13866314-13866510)
chr4 (17-214)||(13850800-13850996)
chr4 (110-238)||(17292106-17292232)
chr4 (89-212)||(49817159-49817281)
chr4 (183-213)||(885325-885355)
chr4 (183-213)||(21712048-21712078)
chr4 (183-213)||(45940044-45940074)
chr4 (184-213)||(20901335-20901364)
[»] chr1 (66 HSPs)
chr1 (17-214)||(35576390-35576587)
chr1 (17-214)||(45689170-45689367)
chr1 (18-209)||(21484606-21484797)
chr1 (18-209)||(49427439-49427630)
chr1 (20-213)||(29762180-29762373)
chr1 (18-211)||(39856867-39857060)
chr1 (18-214)||(3658525-3658721)
chr1 (18-214)||(12791231-12791427)
chr1 (18-214)||(39224155-39224351)
chr1 (18-214)||(42571734-42571930)
chr1 (22-213)||(27486649-27486840)
chr1 (17-214)||(48568362-48568559)
chr1 (20-213)||(51269856-51270049)
chr1 (18-209)||(13635260-13635451)
chr1 (20-213)||(44337278-44337471)
chr1 (18-210)||(50068221-50068413)
chr1 (18-209)||(19160369-19160560)
chr1 (18-213)||(29436025-29436220)
chr1 (18-214)||(41874842-41875038)
chr1 (20-213)||(44597755-44597948)
chr1 (18-214)||(46180238-46180435)
chr1 (17-214)||(47487995-47488192)
chr1 (18-214)||(27035276-27035472)
chr1 (19-172)||(36909614-36909767)
chr1 (17-209)||(14173718-14173913)
chr1 (18-214)||(49262946-49263142)
chr1 (18-214)||(30309790-30309980)
chr1 (18-172)||(6435824-6435978)
chr1 (18-164)||(24270371-24270517)
chr1 (18-173)||(35586928-35587083)
chr1 (18-172)||(13972976-13973130)
chr1 (18-172)||(37778131-37778285)
chr1 (18-172)||(49396756-49396910)
chr1 (20-172)||(49926380-49926532)
chr1 (18-172)||(17686361-17686515)
chr1 (18-172)||(38046434-38046588)
chr1 (18-172)||(23342693-23342847)
chr1 (18-209)||(17697098-17697288)
chr1 (18-177)||(48215250-48215409)
chr1 (18-172)||(18170077-18170231)
chr1 (17-210)||(5765257-5765449)
chr1 (25-209)||(17372786-17372970)
chr1 (18-214)||(49598849-49599028)
chr1 (17-178)||(18842490-18842651)
chr1 (18-172)||(35185022-35185177)
chr1 (17-172)||(41780744-41780899)
chr1 (18-160)||(35526189-35526331)
chr1 (18-209)||(13283757-13283947)
chr1 (92-209)||(29707504-29707621)
chr1 (17-212)||(16532051-16532245)
chr1 (17-209)||(24363764-24363955)
chr1 (82-172)||(40533286-40533376)
chr1 (17-211)||(16081336-16081529)
chr1 (18-97)||(13148371-13148450)
chr1 (139-209)||(22527680-22527750)
chr1 (167-206)||(48226760-48226799)
chr1 (180-213)||(21484432-21484465)
chr1 (183-213)||(29707196-29707226)
chr1 (183-213)||(30309490-30309520)
chr1 (183-213)||(41874543-41874573)
chr1 (183-213)||(47487694-47487724)
chr1 (183-213)||(48568063-48568093)
chr1 (183-213)||(50067916-50067946)
chr1 (183-213)||(51270319-51270349)
chr1 (110-163)||(19262422-19262475)
chr1 (183-211)||(39223856-39223884)
[»] chr3 (70 HSPs)
chr3 (18-214)||(34693247-34693443)
chr3 (17-213)||(44927528-44927724)
chr3 (18-214)||(47065753-47065949)
chr3 (18-214)||(39416905-39417101)
chr3 (18-214)||(53826653-53826849)
chr3 (18-214)||(13895827-13896023)
chr3 (18-214)||(19453186-19453382)
chr3 (18-214)||(42383117-42383313)
chr3 (18-214)||(42949977-42950173)
chr3 (18-206)||(50997454-50997642)
chr3 (18-209)||(2646838-2647029)
chr3 (18-214)||(48087509-48087705)
chr3 (17-213)||(49218694-49218890)
chr3 (18-209)||(2268456-2268647)
chr3 (18-209)||(3494991-3495182)
chr3 (20-211)||(49610557-49610748)
chr3 (17-214)||(24702229-24702425)
chr3 (18-214)||(25576549-25576744)
chr3 (18-206)||(34049793-34049981)
chr3 (18-210)||(42382337-42382529)
chr3 (18-206)||(49140019-49140207)
chr3 (18-206)||(54390508-54390696)
chr3 (18-209)||(4004049-4004240)
chr3 (18-209)||(36135073-36135264)
chr3 (20-211)||(51695566-51695757)
chr3 (18-206)||(46403069-46403257)
chr3 (18-172)||(55206883-55207037)
chr3 (18-213)||(44835445-44835640)
chr3 (20-213)||(43477125-43477318)
chr3 (18-172)||(34472075-34472229)
chr3 (18-172)||(51015343-51015497)
chr3 (18-172)||(41577972-41578126)
chr3 (18-172)||(46414333-46414487)
chr3 (18-172)||(51013277-51013431)
chr3 (18-172)||(37281518-37281672)
chr3 (18-172)||(41803968-41804122)
chr3 (17-172)||(2428552-2428707)
chr3 (18-172)||(34647266-34647420)
chr3 (18-172)||(45100464-45100618)
chr3 (17-172)||(7246159-7246314)
chr3 (18-172)||(30192604-30192758)
chr3 (18-167)||(43569976-43570125)
chr3 (18-172)||(7954270-7954424)
chr3 (18-172)||(14631511-14631665)
chr3 (18-172)||(42323388-42323542)
chr3 (18-172)||(52569408-52569561)
chr3 (18-172)||(10053274-10053424)
chr3 (18-172)||(47759890-47760044)
chr3 (18-172)||(49273465-49273619)
chr3 (17-214)||(774296-774492)
chr3 (18-170)||(36721390-36721542)
chr3 (17-211)||(6464305-6464499)
chr3 (17-211)||(6754269-6754463)
chr3 (17-178)||(27187013-27187174)
chr3 (28-172)||(50458690-50458834)
chr3 (51-171)||(46346612-46346732)
chr3 (18-172)||(8633358-8633512)
chr3 (18-206)||(33449117-33449292)
chr3 (17-211)||(20375843-20376036)
chr3 (80-211)||(18440873-18441003)
chr3 (80-211)||(19485947-19486077)
chr3 (17-214)||(14265473-14265666)
chr3 (17-213)||(25887567-25887764)
chr3 (183-213)||(13895527-13895557)
chr3 (183-213)||(24701929-24701959)
chr3 (183-213)||(25576248-25576278)
chr3 (183-213)||(44835144-44835174)
chr3 (183-213)||(44927995-44928025)
chr3 (183-213)||(47066218-47066248)
chr3 (188-224)||(27187834-27187870)
[»] chr8 (33 HSPs)
chr8 (18-209)||(41363718-41363909)
chr8 (18-214)||(33799507-33799703)
chr8 (18-214)||(38033881-38034077)
chr8 (18-209)||(15032285-15032476)
chr8 (17-214)||(43693198-43693395)
chr8 (18-214)||(43638633-43638829)
chr8 (20-211)||(41275458-41275649)
chr8 (18-213)||(42168917-42169112)
chr8 (20-213)||(26452389-26452582)
chr8 (18-214)||(34615015-34615211)
chr8 (20-213)||(2416979-2417172)
chr8 (18-213)||(24861405-24861600)
chr8 (17-211)||(28706101-28706295)
chr8 (18-214)||(40414672-40414866)
chr8 (18-206)||(485222-485410)
chr8 (18-213)||(40415319-40415514)
chr8 (18-172)||(41856972-41857126)
chr8 (18-172)||(44943079-44943233)
chr8 (18-172)||(42603516-42603670)
chr8 (17-165)||(40702421-40702569)
chr8 (18-172)||(18440293-18440447)
chr8 (18-172)||(19242160-19242314)
chr8 (18-172)||(19315344-19315498)
chr8 (17-214)||(3589223-3589419)
chr8 (18-135)||(26484639-26484756)
chr8 (17-214)||(31171773-31171969)
chr8 (110-213)||(22549236-22549336)
chr8 (20-115)||(16575756-16575851)
chr8 (20-72)||(22548327-22548379)
chr8 (183-213)||(24861870-24861900)
chr8 (183-213)||(38033581-38033611)
chr8 (183-213)||(40415785-40415815)
chr8 (145-209)||(16575869-16575933)
[»] chr5 (45 HSPs)
chr5 (20-214)||(19400416-19400610)
chr5 (18-214)||(3601392-3601588)
chr5 (18-209)||(7194-7385)
chr5 (18-209)||(8538005-8538196)
chr5 (18-209)||(11346760-11346951)
chr5 (18-211)||(541598-541791)
chr5 (18-214)||(1971416-1971612)
chr5 (18-209)||(8576106-8576297)
chr5 (18-209)||(27661342-27661533)
chr5 (18-209)||(28881042-28881233)
chr5 (18-206)||(19036642-19036830)
chr5 (18-209)||(30709649-30709840)
chr5 (18-212)||(11027828-11028022)
chr5 (18-172)||(4724076-4724230)
chr5 (18-209)||(38854209-38854399)
chr5 (18-172)||(1400304-1400458)
chr5 (18-185)||(40009579-40009746)
chr5 (18-172)||(18308311-18308465)
chr5 (17-178)||(33370704-33370865)
chr5 (82-214)||(7082336-7082468)
chr5 (18-172)||(6793388-6793542)
chr5 (18-172)||(35565323-35565476)
chr5 (37-172)||(1694859-1694994)
chr5 (18-172)||(36350316-36350461)
chr5 (18-131)||(3169654-3169767)
chr5 (17-175)||(17366735-17366893)
chr5 (117-214)||(3458940-3459037)
chr5 (18-141)||(35927470-35927593)
chr5 (112-209)||(22283716-22283813)
chr5 (17-129)||(2599269-2599381)
chr5 (110-213)||(17195321-17195423)
chr5 (110-238)||(13131015-13131142)
chr5 (110-211)||(18920877-18920977)
chr5 (113-178)||(12742818-12742883)
chr5 (18-75)||(3458887-3458944)
chr5 (180-214)||(40011830-40011864)
chr5 (180-213)||(3601859-3601892)
chr5 (113-178)||(12805636-12805701)
chr5 (110-214)||(36311906-36312009)
chr5 (183-213)||(1971883-1971913)
chr5 (183-213)||(3170051-3170081)
chr5 (183-213)||(19400881-19400911)
chr5 (77-163)||(19748178-19748263)
chr5 (183-213)||(40012134-40012164)
chr5 (180-213)||(33371146-33371179)
[»] scaffold0589 (2 HSPs)
scaffold0589 (18-214)||(2321-2517)
scaffold0589 (183-213)||(4805-4835)
[»] chr2 (47 HSPs)
chr2 (18-214)||(10360153-10360349)
chr2 (20-211)||(3941795-3941986)
chr2 (18-214)||(12968256-12968452)
chr2 (18-214)||(42120068-42120264)
chr2 (18-214)||(42241053-42241249)
chr2 (17-209)||(29067784-29067976)
chr2 (18-206)||(3937026-3937214)
chr2 (18-214)||(29906638-29906834)
chr2 (18-206)||(43982912-43983100)
chr2 (18-209)||(17424845-17425036)
chr2 (18-209)||(29111214-29111405)
chr2 (18-211)||(5420525-5420718)
chr2 (20-213)||(39393949-39394142)
chr2 (18-214)||(32734703-32734899)
chr2 (18-214)||(16581878-16582076)
chr2 (18-172)||(35491691-35491845)
chr2 (17-172)||(27130505-27130660)
chr2 (18-211)||(22493327-22493520)
chr2 (18-172)||(2919361-2919515)
chr2 (18-172)||(37312491-37312645)
chr2 (18-171)||(10364634-10364787)
chr2 (17-209)||(22001889-22002081)
chr2 (18-172)||(6976892-6977046)
chr2 (18-172)||(19471630-19471784)
chr2 (18-172)||(34521680-34521834)
chr2 (18-172)||(41499090-41499244)
chr2 (18-209)||(17796066-17796254)
chr2 (18-172)||(40677371-40677525)
chr2 (18-209)||(33404071-33404261)
chr2 (17-178)||(6902021-6902182)
chr2 (99-214)||(18393486-18393601)
chr2 (17-178)||(20148173-20148334)
chr2 (77-214)||(27650382-27650518)
chr2 (18-105)||(39799905-39799992)
chr2 (18-104)||(18392093-18392179)
chr2 (112-205)||(43491600-43491696)
chr2 (110-214)||(31991891-31991994)
chr2 (151-209)||(39799828-39799886)
chr2 (110-214)||(18036117-18036220)
chr2 (20-87)||(34639023-34639090)
chr2 (107-211)||(16253600-16253703)
chr2 (110-207)||(15891609-15891705)
chr2 (183-213)||(8557380-8557410)
chr2 (183-213)||(16582346-16582376)
chr2 (183-213)||(22493794-22493824)
chr2 (183-213)||(42120535-42120565)
chr2 (184-213)||(10359854-10359883)
[»] scaffold0192 (1 HSPs)
scaffold0192 (18-214)||(17874-18070)
[»] chr7 (49 HSPs)
chr7 (19-219)||(18237619-18237819)
chr7 (18-214)||(41217668-41217864)
chr7 (17-212)||(39477199-39477394)
chr7 (18-213)||(47268952-47269147)
chr7 (18-219)||(34140919-34141120)
chr7 (20-213)||(40588605-40588798)
chr7 (18-209)||(17839377-17839569)
chr7 (17-214)||(17183265-17183465)
chr7 (18-206)||(20564813-20565001)
chr7 (55-214)||(2205994-2206153)
chr7 (18-172)||(41048837-41048991)
chr7 (18-211)||(30360571-30360763)
chr7 (20-213)||(45363210-45363394)
chr7 (18-209)||(48270702-48270896)
chr7 (18-209)||(20378665-20378856)
chr7 (19-172)||(48315179-48315332)
chr7 (18-214)||(2356343-2356539)
chr7 (18-209)||(10523122-10523314)
chr7 (18-209)||(21614722-21614913)
chr7 (17-172)||(36393823-36393978)
chr7 (48-206)||(9367085-9367243)
chr7 (18-172)||(42735316-42735470)
chr7 (17-213)||(1642546-1642741)
chr7 (18-169)||(46862196-46862347)
chr7 (18-172)||(21187298-21187452)
chr7 (18-172)||(30354814-30354968)
chr7 (18-210)||(48220705-48220895)
chr7 (18-172)||(15337904-15338058)
chr7 (18-172)||(43351099-43351252)
chr7 (18-175)||(21650578-21650735)
chr7 (77-209)||(13920419-13920551)
chr7 (18-172)||(28114392-28114546)
chr7 (110-214)||(26601735-26601839)
chr7 (18-130)||(28979063-28979175)
chr7 (112-209)||(17320163-17320260)
chr7 (132-209)||(34139334-34139411)
chr7 (18-103)||(26603273-26603358)
chr7 (158-214)||(28979009-28979065)
chr7 (118-214)||(3380632-3380727)
chr7 (77-172)||(28066368-28066463)
chr7 (18-72)||(13916887-13916941)
chr7 (77-214)||(150201-150337)
chr7 (110-178)||(11824839-11824907)
chr7 (17-60)||(42683009-42683052)
chr7 (183-213)||(17183736-17183766)
chr7 (183-213)||(18238085-18238115)
chr7 (183-213)||(41218133-41218163)
chr7 (188-224)||(15337567-15337603)
chr7 (185-213)||(30361036-30361064)
[»] chr6 (24 HSPs)
chr6 (20-209)||(801223-801412)
chr6 (20-210)||(29108198-29108388)
chr6 (18-206)||(6205540-6205728)
chr6 (18-206)||(11692507-11692695)
chr6 (18-214)||(35058692-35058888)
chr6 (18-209)||(27640236-27640427)
chr6 (20-210)||(29066611-29066801)
chr6 (20-210)||(29075624-29075814)
chr6 (20-210)||(29110596-29110786)
chr6 (20-172)||(13402591-13402743)
chr6 (18-172)||(32027627-32027781)
chr6 (18-172)||(32037686-32037840)
chr6 (18-172)||(12396832-12396986)
chr6 (18-209)||(14115093-14115283)
chr6 (21-172)||(30257578-30257729)
chr6 (18-172)||(34802895-34803049)
chr6 (92-214)||(3765744-3765867)
chr6 (18-143)||(22305852-22305977)
chr6 (112-209)||(2192547-2192644)
chr6 (112-209)||(24021059-24021156)
chr6 (91-214)||(17465293-17465415)
chr6 (124-171)||(35021237-35021284)
chr6 (191-238)||(28051596-28051643)
chr6 (183-213)||(35058392-35058422)
[»] scaffold0176 (1 HSPs)
scaffold0176 (18-219)||(1844-2045)
[»] scaffold0004 (2 HSPs)
scaffold0004 (113-209)||(64098-64194)
scaffold0004 (18-84)||(64029-64095)
[»] scaffold0031 (1 HSPs)
scaffold0031 (112-209)||(85474-85571)
[»] scaffold0181 (1 HSPs)
scaffold0181 (21-135)||(24962-25076)
[»] scaffold0268 (1 HSPs)
scaffold0268 (112-209)||(14616-14713)
[»] scaffold0861 (1 HSPs)
scaffold0861 (183-213)||(2474-2504)


Alignment Details
Target: chr4 (Bit Score: 161; Significance: 5e-86; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 18 - 214
Target Start/End: Original strand, 1226211 - 1226407
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||||||| || |||||||||||  |||||||||||||||| |||||||||||    
T  1226211 tatcattcacttgtgtggaattaaagaacgacgaaaatgtgacgagcatgttttgggagcacaacatgttctagtggatcgatatgcgggtaacgttgct 1226310  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1226311 gagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 1226407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 18 - 214
Target Start/End: Complemental strand, 14330849 - 14330653
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||||||||| || ||||||||||| || |||||||||||||| |||||||||||    
T  14330849 tatcattcacttgggtggaattaaagaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccaatggatcgatatgcgggtaacgttgct 14330750  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  14330749 gagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattagttaaggtaaggtgcattccaactacaacaattgtcttacctc 14330653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 18 - 214
Target Start/End: Original strand, 45939577 - 45939774
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||    
T  45939577 tatcattcacttgggtggaattaacgaacgacgataatgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgagtaacgttgct 45939676  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaac-aattgtcttacctc 214  Q
    ||||||||||||| |||||||||| || |||||||  ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  45939677 gagatcaactgaagatatcatcaacaacttgattcttccataagatcgtcattagttagggtaaggtgcattccaactacaactaattgtcttacctc 45939774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 18 - 214
Target Start/End: Original strand, 21711582 - 21711778
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||||||||| || ||||||||||| ||||||||||||||||| || ||||||||    
T  21711582 tatcattcacttgggtggaattaaagaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtgacgttgct 21711681  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    |||||||||| || |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  21711682 gagatcaactaaagatatcatcaacaacttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattctcttacctc 21711778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 18 - 214
Target Start/End: Original strand, 25762650 - 25762846
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| || |||||||||||   ||||||||||||||| |||||||||||    
T  25762650 tatcattcacttgggtggaattaacgaacgacgaaaacgtgacgaacatgttttgggagcacaacatgttctggtggatcgatatgcgggtaacgttgct 25762749  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    ||||||||||||| |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  25762750 gagatcaactgaagatatcatcaacaacttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactgcaacaattgtcttacctc 25762846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 18 - 214
Target Start/End: Original strand, 27759379 - 27759575
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||| |||| |||||||||||| ||||||||||||||||| || |||| |||||| |||||||||||||||||||||||||||||    
T  27759379 tatcattcacttgggtggagttaaagaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagtggatcgatatgcgagtaacgttgct 27759478  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    ||||||||||||| |||||||||| |  |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  27759479 gagatcaactgaagatatcatcaacagcttgattccgccagaagatcgtcattagttagggtaaggtgcatttcaactacaacaattgtcttacctc 27759575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 17 - 209
Target Start/End: Complemental strand, 32938058 - 32937866
Alignment:
Q  17 atatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgc 116  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||||||| | || |||| |||||| ||||||||||||||||| |||||||||     
T  32938058 atatcattcagttgggtggaattaacgaacgacgaaaacgtgacgagcatgtttcgggagcacagcatgttccagtggatcgatatgcgggtaacgttgt 32937959  T
Q  117 tgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 209  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  32937958 tgagatcaactgaagatatcatcaaaaatttgattccgccagaagatcgtcattagatagggtaaggtgcattccaactacaacaattgtctt 32937866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 20 - 214
Target Start/End: Original strand, 49064033 - 49064227
Alignment:
Q  20 tcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgctga 119  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||||  || ||||||||||| | ||||||||||||||| || |||||||| |    
T  49064033 tcattcacttgggtggaattaaagaacgacgaaaacgtgacgagcatgtttttggagcacaacatgtttccgtggatcgatatgcgggtgacgttgctta 49064132  T
Q  120 gatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49064133 gatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 49064227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 18 - 214
Target Start/End: Complemental strand, 51027922 - 51027726
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| ||||||||||||||||| ||||||||| |    
T  51027922 tatcattcacttgggtggaattaacgaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtaacgttgtt 51027823  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    ||||||||||||| |||||||||| || |||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  51027822 gagatcaactgaagatatcatcaacaacttgattccaccataagatcgtcattagttagggtaaggtgcactccaactacaacaattgtcgtacctc 51027726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 18 - 214
Target Start/End: Complemental strand, 51428347 - 51428151
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||| || ||||||||||| ||||||||||||||||| ||||||||| |    
T  51428347 tatcattcacttgtgtggagttaacgaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtaacgttgtt 51428248  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    ||||||||||||| |||||||||| |  |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51428247 gagatcaactgaagatatcatcaacagcttgattccgcaagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 51428151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 18 - 209
Target Start/End: Complemental strand, 21017332 - 21017141
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| || |||| |||||| ||||||||||||||||| || | ||||||    
T  21017332 tatcattcacttgggtggaattaacgaacgacgaaaacgtgacgaccatgttttgggagcacagcatgttccagtggatcgatatgcgggtgaagttgct 21017233  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 209  Q
     |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21017232 tagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 21017141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 18 - 209
Target Start/End: Complemental strand, 40353928 - 40353737
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| || ||||||||||| ||||||||||||||||| || | ||||||    
T  40353928 tatcattcacttgggtggaattaacgaacgacgaaaacgtgacgaccatgttttgggagcacaacatgttccagtggatcgatatgcgggtgaagttgct 40353829  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 209  Q
     |||||||||||| |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  40353828 tagatcaactgaagatatcatcaaaagtttgattccgccagaagattgtcattagttagggtaaggtgcattccaactacaacaattgtctt 40353737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 17 - 214
Target Start/End: Complemental strand, 20901824 - 20901627
Alignment:
Q  17 atatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgc 116  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||| ||||||  |||||||||||||||| |||||  |||    
T  20901824 atatcattcacttgggtggaattaacgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttctagtggatcgatatgcgggtaacactgc 20901725  T
Q  117 tgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    |||||||||||||| |||||||||| || |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20901724 tgagatcaactgaagatatcatcaacaacttgattccacctgaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 20901627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 21 - 214
Target Start/End: Complemental strand, 33163696 - 33163503
Alignment:
Q  21 cattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgctgag 120  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||| | ||||||||| ||||    
T  33163696 cattcacttgggtggagttaaagaacgacgaaaatgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgtgggtaacgttgttgag 33163597  T
Q  121 atcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    |||||||||| |||||||||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  33163596 atcaactgaagatatcatcaacagcttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttgcctc 33163503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 18 - 209
Target Start/End: Original strand, 55796795 - 55796986
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| || |||| |||||| ||||||||||||||||| || | ||||||    
T  55796795 tatcattcacttgggtggaattaacgaacgacgaaaacgtgacgaccatgttttgggagcacagcatgttccagtggatcgatatgcgggtgaagttgct 55796894  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 209  Q
     |||||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55796895 tagatcaactgaagatatcatcaaaagtttgattccgccacaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 55796986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 20 - 213
Target Start/End: Original strand, 1042803 - 1042996
Alignment:
Q  20 tcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgctga 119  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||||||| || |||| |||||| ||||||||||||||||| || ||||||||||    
T  1042803 tcattcacttgggtggaattaacgaacgacgaaaacgtgacgaacatgttttgggagcacagcatgttccagtggatcgatatgcgggtgacgttgctga 1042902  T
Q  120 gatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacct 213  Q
    ||||||||||| |||| ||||| || ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  1042903 gatcaactgaagatataatcaacaacttgattccgccagaagatcgtcattagttagggtaaggtacattccaactgcaacaattgtcttacct 1042996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 20 - 213
Target Start/End: Original strand, 39588983 - 39589176
Alignment:
Q  20 tcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgctga 119  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||| |||||| |||||||||||||||||  | ||||||||||    
T  39588983 tcattcacttgggtggaattaacaaacgacgaaaatgtgacgagcatgttttgggagcacagcatgttccagtggatcgatatgcggatgacgttgctga 39589082  T
Q  120 gatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacct 213  Q
    ||||||||||| |||||||||| || |||||||||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  39589083 gatcaactgaagatatcatcaacaacttgattccgctagaagatcgtcattagttggggtaaggtgcattccaacttcaacaattgtcttacct 39589176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 18 - 209
Target Start/End: Complemental strand, 20779024 - 20778833
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| || |||||||||||||| ||  |||||||    
T  20779024 tatcattcatttgggtggaattaacgaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccaatggatcgatatgcgggtttcgttgct 20778925  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 209  Q
    ||||||||||||| |||||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  20778924 gagatcaactgaagatatcatcaaaagtttgattccgccaaaagatcgtcattaggtagggtaaggtgcattccaaccacaacaattgtctt 20778833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 18 - 209
Target Start/End: Original strand, 28082290 - 28082481
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||||| || |||| |||||| ||||||||| ||||||  || | ||| ||    
T  28082290 tatcattcacttgggtggaattaacgaacgacgaaaacatgacgagcatgttttgggagcacatcatgtttcagtggatcaatatgcaggtgaagttact 28082389  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 209  Q
     |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28082390 tagatcaactgaagatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 28082481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 17 - 211
Target Start/End: Complemental strand, 31824785 - 31824591
Alignment:
Q  17 atatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgc 116  Q
    |||||||||||||||||||| |||| |||||||||||| ||||||||||||||||| || |||||||||||  |||||||| ||||||| ||||||||||    
T  31824785 atatcattcacttgggtggagttaaagaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttctagtggatcaatatgcgggtaacgttgc 31824686  T
Q  117 tgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttac 211  Q
    | |||||||||||| |||||||||| |  |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31824685 ttagatcaactgaagatatcatcaacagcttgattccgctagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttac 31824591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 18 - 206
Target Start/End: Complemental strand, 41794717 - 41794529
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||| || ||||||||||| ||||||||||||||||| || | ||||||    
T  41794717 tatcattcagttgggtggaattaacgaacgacgaaaacgtgacgaccatgttttgggagcacaacatgttccagtggatcgatatgcgggtgaagttgct 41794618  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgt 206  Q
     |||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  41794617 tagatcaactgaagatatcatcaaaagtttgattccgccacaagatcgtcattagttagggtaaggtgcattccaactacaacatttgt 41794529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 20 - 213
Target Start/End: Original strand, 9489733 - 9489925
Alignment:
Q  20 tcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgctga 119  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||| |||||| |||||||| |||||||| || |||||  |||    
T  9489733 tcattcacttgggtggaattaacaaacgacgaaaatgtgacgagcatgttttg-gagcacagcatgttccagtggattgatatgcgggtgacgttattga 9489831  T
Q  120 gatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacct 213  Q
    ||||||||||| |||||||||| || |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  9489832 gatcaactgaagatatcatcaacaacttgattccgccagaagatcgtcattagttagggtaaagtgcattccaactgcaacaattgtcttacct 9489925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 18 - 206
Target Start/End: Complemental strand, 6177470 - 6177282
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||| || |||| |||||| ||||||||||||||||| || | ||||||    
T  6177470 tatcattcagttgggtggaattaacgaacgacgaaaacgtgacgaccatgttttgggagcacagcatgttccagtggatcgatatgcgggtgaagttgct 6177371  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgt 206  Q
     |||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  6177370 tagatcaactgaagatatcatcaaaagtttgattccgccacaagatcgtcattagttagggtaaggtgcattccaactacaacatttgt 6177282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 18 - 206
Target Start/End: Original strand, 56138962 - 56139150
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||| || |||| |||||| ||||||||||||||||| || | ||||||    
T  56138962 tatcattcagttgggtggaattaacgaacgacgaaaacgtgacgaccatgttttgggagcacagcatgttccagtggatcgatatgcgggtgaagttgct 56139061  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgt 206  Q
     |||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  56139062 tagatcaactgaagatatcatcaaaagtttgattccgccacaagatcgtcattagttagggtaaggtgcattccaactacaacatttgt 56139150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 19 - 214
Target Start/End: Complemental strand, 242570 - 242375
Alignment:
Q  19 atcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgctg 118  Q
    ||||||||||| |||||| |||| |||||| ||||| ||||||||||||||||| || |||| |||||| ||||||||||||||||| ||||||||||||    
T  242570 atcattcacttaggtggagttaaagaacgatgaaaacgtgacgagcatgttttgggagcacatcatgttccagtggatcgatatgcgggtaacgttgctg 242471  T
Q  119 agatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    |||||||||||| |||||||||| |  ||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||    
T  242470 agatcaactgaagatatcatcaacagcttgattccgccagaagatcgtcattagttaaagtaaggtgcattccaactataacaattgtcttacctc 242375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 18 - 214
Target Start/End: Original strand, 37866458 - 37866655
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgtttt-gagaccacaacatgttacagtggatcgatatgcgagtaacgttgc 116  Q
    ||||||||||||||||||||||||||| ||||||||| |||| ||||||||||| | || ||||||||||| ||||||||||||||||| || |||||||    
T  37866458 tatcattcacttgggtggaattaacgagcgacgaaaacgtgatgagcatgttttcgggagcacaacatgttccagtggatcgatatgcgggtgacgttgc 37866557  T
Q  117 tgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    |||||||||||||| |||||||||| |  |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||    
T  37866558 tgagatcaactgaagatatcatcaatatcttgattccgctagaagatcgtcattagttagggtaaggtgcattccaactgcaacagtcgtcttacctc 37866655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 18 - 214
Target Start/End: Complemental strand, 46816678 - 46816484
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||| |||| ||||||| |||| ||||||||||||||||| || ||||||||||| ||||||||||||||||  ||||||||| |    
T  46816678 tatcattcacttgggtggagttaaagaacgacaaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcaggtaacgttgtt 46816579  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    |||||||  |||| |||||||||| |  ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  46816578 gagatca--tgaagatatcatcaatagcttgattccgccagaagatcgtcattagttagggcaaggtgcattccaactacaacaattgtcttacctc 46816484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 18 - 206
Target Start/End: Original strand, 49094797 - 49094985
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||| |||||||||||||||||||||| |||| ||||||| ||||||||| || ||||||||||| ||||||||||||||||| || | ||||||    
T  49094797 tatcattcagttgggtggaattaacgaacgacaaaaacgtgacgaccatgttttgggagcacaacatgttccagtggatcgatatgcgggtgaagttgct 49094896  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgt 206  Q
     |||||||||||| ||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  49094897 tagatcaactgaagatatcgtcaaaagtttgattccgccacaagatcgtcattagttagggtaaggtgcattccaactacaacatttgt 49094985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 18 - 172
Target Start/End: Original strand, 22436963 - 22437117
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| || ||||||||||| ||||||||||||||||| || ||||||||    
T  22436963 tatcattcacttgggtggaattaacgaacgatgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtgacgttgct 22437062  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    ||||||||||||| |||||||||||| |||||||||||| |||||||||||||||    
T  22437063 gagatcaactgaagatatcatcaaaagtttgattccgccggaagatcgtcattag 22437117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 20 - 172
Target Start/End: Complemental strand, 34529949 - 34529797
Alignment:
Q  20 tcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgctga 119  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||||| || ||||||||||| ||||||||||||||||  || ||||||||||    
T  34529949 tcattcacttgggtggaattaacaaacgacgaaaatgtgacgagcattttttgggagcacaacatgttccagtggatcgatatgcaggtgacgttgctga 34529850  T
Q  120 gatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  34529849 gatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattag 34529797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 957610 - 957456
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||  || |||| |||||| ||||||||||||||||| || ||||||||    
T  957610 tatcattcacttgggtggaattaacgaacgacgaaaacgtgacgagcatgttttaggagcacagcatgttccagtggatcgatatgcgggtgacgttgct 957511  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    |||||||||| || |||||||||||| ||||||||||||||||||||||||||||    
T  957510 gagatcaactaaagatatcatcaaaagtttgattccgccagaagatcgtcattag 957456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 18 - 175
Target Start/End: Complemental strand, 6282478 - 6282321
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||||| || ||||||||||| ||||||||||||||||| || | ||||||    
T  6282478 tatcattcacttgggtggaattaacgaatgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtgaagttgct 6282379  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagtta 175  Q
     |||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||    
T  6282378 aagatcaactgaagatatcatcaaaagtttgattctgccagaagatcgtcattagtta 6282321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 43889654 - 43889500
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| || |||| |||||| ||||||||||||||||| || |||||| |    
T  43889654 tatcattcacttgggtggaattaacgaacgacgaaaacgtgacgaacatgttttgggagcacatcatgttccagtggatcgatatgcgggtgacgttgtt 43889555  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    ||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||    
T  43889554 gagatcaactgaagatataatcaaaagtttgattccgccagaagatcgtcattag 43889500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 47657510 - 47657356
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    |||||||||||||| ||||||||||||||||| |||| ||||||||||| ||||| || ||||||||||| ||||||||||||||||| || ||||||||    
T  47657510 tatcattcacttggatggaattaacgaacgaccaaaacgtgacgagcatattttgggagcacaacatgttccagtggatcgatatgcgggtgacgttgct 47657411  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    ||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||    
T  47657410 gagatcaactgaagatatcatcaaaagtttgattccaccagaagatcgtcattag 47657356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 20 - 172
Target Start/End: Complemental strand, 26591838 - 26591686
Alignment:
Q  20 tcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgctga 119  Q
    |||||||||||||||||||||||||||||| |||| ||||||| ||| ||||| || ||||||||||| ||||||||||||||||| ||||||||||| |    
T  26591838 tcattcacttgggtggaattaacgaacgacaaaaacgtgacgaacatattttgggagcacaacatgttccagtggatcgatatgcgggtaacgttgctaa 26591739  T
Q  120 gatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    ||||||||||| |||||||||| || |||||||||||||||||||||||||||    
T  26591738 gatcaactgaagatatcatcaacaacttgattccgccagaagatcgtcattag 26591686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 18 - 169
Target Start/End: Original strand, 2773061 - 2773212
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| || ||||||||||| ||||||||||||||||| ||||||||  |    
T  2773061 tatcattcacttgggtggaattaacgaacgacgaaaacgtgacgaacatgttttgggagcacaacatgttccagtggatcgatatgcgggtaacgttatt 2773160  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcat 169  Q
    ||||||||||||| ||| |||||| || ||||||||||||||||||||||||    
T  2773161 gagatcaactgaagataccatcaacaacttgattccgccagaagatcgtcat 2773212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 17 - 211
Target Start/End: Original strand, 18412646 - 18412839
Alignment:
Q  17 atatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgc 116  Q
    |||||||||| || ||||||||||| ||||||||| || |||| |||||||||||| || |||| |||||| ||||||||||||||||| ||||||||||    
T  18412646 atatcattcagttcggtggaattaatgaacgacgataacgtgaggagcatgttttgggagcacaccatgtttcagtggatcgatatgcgtgtaacgttgc 18412745  T
Q  117 tgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttac 211  Q
    |||||||||||||| |||| ||||| |||||||||| ||||||||||||| ||||| ||||| || |  | ||||||||||||||||||||||||    
T  18412746 tgagatcaactgaatatattatcaacaatttgattctgccagaagatcgtgattaggtaggg-aatgcaccttccaactacaacaattgtcttac 18412839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 22 - 172
Target Start/End: Complemental strand, 49792087 - 49791937
Alignment:
Q  22 attcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgctgaga 121  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||| || ||||||||||| ||||||||||||||||  |||||||||||||||    
T  49792087 attcacttgggtggaattaacgaatgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcaggtaacgttgctgaga 49791988  T
Q  122 tcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    ||||||||| |||||||||| || |||||||||||| |||||| |||||||    
T  49791987 tcaactgaagatatcatcaacaacttgattccgccaaaagatcatcattag 49791937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 18 - 171
Target Start/End: Complemental strand, 34153441 - 34153288
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| || ||||||||||| ||||||||| |||||||  | |||||| |    
T  34153441 tatcattcacttgggtggaattaacgaacgacgaaaacgtgacgatcatgttttgggagcacaacatgttccagtggatcaatatgcggatgacgttggt 34153342  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcatta 171  Q
    ||||||||||||| |||||||||||| |||||||| ||||||||||||||||||    
T  34153341 gagatcaactgaagatatcatcaaaagtttgattctgccagaagatcgtcatta 34153288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 17 - 211
Target Start/End: Original strand, 17211317 - 17211511
Alignment:
Q  17 atatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgc 116  Q
    |||||||||| ||| || ||||||||||||||  |||| ||||||||||||||||| || ||||||||||| ||||||||||||||||| ||||||||||    
T  17211317 atatcattcatttgagtcgaattaacgaacgataaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtaacgttgc 17211416  T
Q  117 tgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttac 211  Q
    ||||||||||| || |||| ||||| | | |||||||||||||||||||| ||||| ||||| || |    ||||||||||||||||||||||||    
T  17211417 tgagatcaactaaagatattatcaacagtctgattccgccagaagatcgtgattaggtagggaaatgcatcttccaactacaacaattgtcttac 17211511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 17 - 212
Target Start/End: Original strand, 10312323 - 10312517
Alignment:
Q  17 atatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgc 116  Q
    |||||||| | ||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| ||||||||||||||||| |||||||||     
T  10312323 atatcatttagttgggtggaattaacgaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtaacgttgt 10312422  T
Q  117 tgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacc 212  Q
    | |||||||||||| |||| ||||| ||| | |||||||  ||||||||| ||||| ||||| ||    | |||||||||||||||||||||||||    
T  10312423 taagatcaactgaagatattatcaacaatctaattccgctggaagatcgtgattaggtaggg-aattcaccttccaactacaacaattgtcttacc 10312517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 18 - 209
Target Start/End: Original strand, 21169503 - 21169697
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    |||||||||||||||| ||||||||| |||| ||| | | ||||||||||||||| || |||| |||||  ||||||||||||||||  || ||||||||    
T  21169503 tatcattcacttgggtcgaattaacggacgatgaatacgcgacgagcatgttttgggagcacagcatgtaccagtggatcgatatgcaggtgacgttgct 21169602  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaag-gtgca--ttccaactacaacaattgtctt 209  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || || | |  ||||  ||||||||||||||||||||||    
T  21169603 gagatcaactgaagatatcatcaaaaatttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttccaactacaacaattgtctt 21169697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 22 - 209
Target Start/End: Original strand, 24606808 - 24606995
Alignment:
Q  22 attcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgctgaga 121  Q
    ||||| |||||| |||||||||||||||||||| ||||||||||||| ||| || |||| |||||| | |||||| |||||| | |||||||||||||||    
T  24606808 attcagttgggtagaattaacgaacgacgaaaacgtgacgagcatgtattgggagcacatcatgttcccgtggattgatatgtgggtaacgttgctgaga 24606907  T
Q  122 tcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 209  Q
    ||||||||| |||| ||||| | | |||||||||||||||||||| ||||| ||||  || || ||||||||||||||||||||||||    
T  24606908 tcaactgaagatattatcaagagtctgattccgccagaagatcgtgattaggtaggtaaatgtacattccaactacaacaattgtctt 24606995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 21 - 172
Target Start/End: Complemental strand, 49817796 - 49817645
Alignment:
Q  21 cattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgctgag 120  Q
    |||||| ||||||||||||||||||||||||||| || |||||||||||||| || |||| ||||||  |||||||||||||||| ||||||||||||||    
T  49817796 cattcagttgggtggaattaacgaacgacgaaaacgttacgagcatgttttgggagcacatcatgttctagtggatcgatatgcgggtaacgttgctgag 49817697  T
Q  121 atcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    |||||||||| |||| ||||| | | ||||||||||||||||||||||||||    
T  49817696 atcaactgaagatattatcaacagtctgattccgccagaagatcgtcattag 49817645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 3393356 - 3393549
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||| | ||||||||||||||||||||||||||| |||| |||||||||||| || |||||||||||  |||||||||||||||  |||||||||||    
T  3393356 tatcatttagttgggtggaattaacgaacgacgaaaacgtgaggagcatgttttgggagcacaacatgttctagtggatcgatatgcatgtaacgttgct 3393455  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacc 212  Q
    ||||||||||||| |||| ||||| | | |||||||||||||||||| | ||||| ||||| || |  | |||||||||||||| |||| |||||    
T  3393456 gagatcaactgaagatattatcaacagtctgattccgccagaagatcatgattaggtaggg-aatgcaccttccaactacaacatttgtattacc 3393549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 17 - 171
Target Start/End: Original strand, 11288346 - 11288499
Alignment:
Q  17 atatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgc 116  Q
    |||||||| | ||||||||||||||||||||||||||| ||||||||||||||||| || |||| |||||| ||||||||||||||||||||||||||||    
T  11288346 atatcatttagttgggtggaattaacgaacgacgaaaacgtgacgagcatgttttgggagcacatcatgttccagtggatcgatatgcgagtaacgttgc 11288445  T
Q  117 tgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcatta 171  Q
    |||||||||||||| |||| ||| | |||||||||| |  |||||||||| ||||    
T  11288446 tgagatcaactgaagatattatc-acaatttgattctgttagaagatcgtgatta 11288499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 18 - 172
Target Start/End: Original strand, 42886318 - 42886472
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||||||||| |||||||||||  ||||||||||| ||||||| |||||||| ||  |||||||||||| ||| |||||||||||    
T  42886318 tatcattcacttgggtggaattaaccaacgacgaaaacatgacgagcatgctttgagagcacaacattttctagtggatcgatacgcgggtaacgttgct 42886417  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    ||||||||||||| |||| ||||| | | |||||||||||||||||| |||||||    
T  42886418 gagatcaactgaagatattatcaacagtctgattccgccagaagatcatcattag 42886472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 49423913 - 49423759
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||||||| || || |||  ||||||  |||||||||||||||| || ||||||||    
T  49423913 tatcattcacttggatggaattaacgaacgacgaaaacgtgacgagcatgttctgggagcacggcatgttcaagtggatcgatatgcgggtgacgttgct 49423814  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    ||||||||||||| | |||||||||| |||||||| |||| ||||||||||||||    
T  49423813 gagatcaactgaagaaatcatcaaaagtttgattctgccataagatcgtcattag 49423759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 172
Target Start/End: Complemental strand, 4785576 - 4785423
Alignment:
Q  19 atcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgctg 118  Q
    ||||||||||| ||||||||||||||||||| |||| |||| || ||||||||| || ||||||||||| ||||||||||||||||| | ||||||||||    
T  4785576 atcattcactttggtggaattaacgaacgacaaaaacgtgaagaacatgttttgggagcacaacatgttccagtggatcgatatgcggggaacgttgctg 4785477  T
Q  119 agatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    | |||||||||| |||| ||||| | ||||||||||||| ||||||||||||||    
T  4785476 atatcaactgaagatattatcaacagtttgattccgccacaagatcgtcattag 4785423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 22 - 172
Target Start/End: Complemental strand, 36776670 - 36776520
Alignment:
Q  22 attcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgctgaga 121  Q
    |||||||||||| |||||||||||||||||||| |||||||||||| |||| || |||  |||||| ||||||||||||||||| || |||||| |||||    
T  36776670 attcacttgggtagaattaacgaacgacgaaaacgtgacgagcatggtttgggagcacggcatgttccagtggatcgatatgcgggtgacgttgttgaga 36776571  T
Q  122 tcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    ||||||||| |||||||||||| |||||||||||   ||||||||||||||    
T  36776570 tcaactgaagatatcatcaaaagtttgattccgctgaaagatcgtcattag 36776520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 17 - 172
Target Start/End: Complemental strand, 44560336 - 44560181
Alignment:
Q  17 atatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgc 116  Q
    ||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||| || || | |||||| ||||| || |||||||| || |||||||    
T  44560336 atatcattcacttggatggaattaacgaacgacgaaaacgtgacaagcatgttttgggagcaaagcatgttccagtgtattgatatgcgggtgacgttgc 44560237  T
Q  117 tgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    |||||||||||||| |||||||||||| ||||||| | ||  ||||||||||||||    
T  44560236 tgagatcaactgaagatatcatcaaaagtttgatttctccttaagatcgtcattag 44560181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 17 - 213
Target Start/End: Original strand, 31324225 - 31324420
Alignment:
Q  17 atatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgc 116  Q
    |||| ||||| |||||||||||||||||||||| |  | ||||||||||||||||  || ||||||||||||| ||||||||||||| | |||| |||||    
T  31324225 atattattcagttgggtggaattaacgaacgacaatgacgtgacgagcatgtttttggagcacaacatgttaccgtggatcgatatgtgtgtaaagttgc 31324324  T
Q  117 tgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacct 213  Q
    |||||||||||||| | ||  |||| | ||||||||||| |||||||| | ||||| ||||| || |  | ||||||||||||||||||||||||||    
T  31324325 tgagatcaactgaagacattctcaacagtttgattccgctagaagatcatgattaggtaggg-aatgcaccttccaactacaacaattgtcttacct 31324420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 17 - 214
Target Start/End: Original strand, 13866314 - 13866510
Alignment:
Q  17 atatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgc 116  Q
    |||||||||| |||| |||||||||| ||||||||  | ||||||| ||||||||| || ||||||||||||| |||||| ||||||   ||||||||||    
T  13866314 atatcattcagttggatggaattaacaaacgacgacgacgtgacgaacatgttttgggagcacaacatgttaccgtggattgatatgtatgtaacgttgc 13866413  T
Q  117 tgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    |||||||||||||| ||||  |||| | |||||||||||||||||| ||| ||||| ||||| || |  | || ||||||||||||||||| ||||||    
T  13866414 tgagatcaactgaagatattctcaacagtttgattccgccagaagaccgtgattaggtaggg-aatgcacctttcaactacaacaattgtcatacctc 13866510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 17 - 214
Target Start/End: Original strand, 13850800 - 13850996
Alignment:
Q  17 atatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgc 116  Q
    |||||||||| |||| || ||||||| ||||||||  | ||||||| ||||||||| || ||||||||||||| |||||||||||||   ||||| ||||    
T  13850800 atatcattcagttggatgaaattaacaaacgacgacgacgtgacgaacatgttttgggagcacaacatgttaccgtggatcgatatgtatgtaacattgc 13850899  T
Q  117 tgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    ||||||||||| || ||||  |||| | |||||||||||||||||| ||| ||||| ||||| || |  | ||||||||||||||||| |||||||||    
T  13850900 tgagatcaactaaagatattctcaacagtttgattccgccagaagaccgtgattaggtaggg-aatgcaccttccaactacaacaattatcttacctc 13850996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 110 - 238
Target Start/End: Original strand, 17292106 - 17292232
Alignment:
Q  110 acgttgctgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 209  Q
    ||||||| ||||||||||||| ||||  |||| | |||||||||||||||||||||| ||||  ||||| || |  | ||||||||||||||||||| ||    
T  17292106 acgttgcagagatcaactgaagatattctcaacagtttgattccgccagaagatcgtgattatgtaggg-aatgcaccttccaactacaacaattgtttt 17292204  T
Q  210 acctcggaataaggtcaaacctgttaaac 238  Q
    ||||| ||| |||||||||||| ||||||    
T  17292205 acctctgaa-aaggtcaaacctattaaac 17292232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 49817281 - 49817159
Alignment:
Q  89 cagtggatcgatatgcgagtaacgttgctgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcat 188  Q
    ||||||||||||||||| ||||||||| ||||||||| |||| |||| ||||| | | |||||| |||| |||||||| ||||| ||||| || |  | |    
T  49817281 cagtggatcgatatgcgtgtaacgttgatgagatcaaatgaagatattatcaacagtctgattctgccaaaagatcgtgattaggtaggg-aatgcacct 49817183  T
Q  189 tccaactacaacaattgtcttacc 212  Q
    ||||||||||| ||||||||||||    
T  49817182 tccaactacaataattgtcttacc 49817159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 213
Target Start/End: Complemental strand, 885355 - 885325
Alignment:
Q  183 gtgcattccaactacaacaattgtcttacct 213  Q
    |||||||||||||||||||||||||||||||    
T  885355 gtgcattccaactacaacaattgtcttacct 885325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 213
Target Start/End: Complemental strand, 21712078 - 21712048
Alignment:
Q  183 gtgcattccaactacaacaattgtcttacct 213  Q
    |||||||||||||||||||||||||||||||    
T  21712078 gtgcattccaactacaacaattgtcttacct 21712048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 213
Target Start/End: Complemental strand, 45940074 - 45940044
Alignment:
Q  183 gtgcattccaactacaacaattgtcttacct 213  Q
    |||||||||||||||||||||||||||||||    
T  45940074 gtgcattccaactacaacaattgtcttacct 45940044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 213
Target Start/End: Original strand, 20901335 - 20901364
Alignment:
Q  184 tgcattccaactacaacaattgtcttacct 213  Q
    ||||||||||||||||||||||||||||||    
T  20901335 tgcattccaactacaacaattgtcttacct 20901364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 158; Significance: 3e-84; HSPs: 66)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 17 - 214
Target Start/End: Original strand, 35576390 - 35576587
Alignment:
Q  17 atatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgc 116  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||| |||||| | ||||||||||||||| || |||||||    
T  35576390 atatcattcacttgggtggaattaacgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccggtggatcgatatgcgggtgacgttgc 35576489  T
Q  117 tgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35576490 tgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 35576587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 17 - 214
Target Start/End: Original strand, 45689170 - 45689367
Alignment:
Q  17 atatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgc 116  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||||| |||||||| || |||||||    
T  45689170 atatcattcacttgggtggaattaacgaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatggatatgcgggtgacgttgc 45689269  T
Q  117 tgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    |||||||||||||| |||||||||| |  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45689270 tgagatcaactgaagatatcatcaacagcttgattccgccataagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 45689367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 18 - 209
Target Start/End: Complemental strand, 21484797 - 21484606
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||  || ||||||||||| |||||||||||||||||||| ||||||||    
T  21484797 tatcattcagttgggtggaattaacgaacgacgaaaatgtgacgagcatgtttttggagcacaacatgttccagtggatcgatatgcgagtgacgttgct 21484698  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 209  Q
    ||||||||||||| |||||||||||| ||||||| | |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  21484697 gagatcaactgaagatatcatcaaaagtttgatttcaccagaagatcgtcattaggtagggtaaggtgcattccaactacaacaattgtctt 21484606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 18 - 209
Target Start/End: Original strand, 49427439 - 49427630
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| || ||||||||||| ||||||||||||||||| || | ||||||    
T  49427439 tatcattcacttgggcggaattaacgaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtgaagttgct 49427538  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 209  Q
     |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49427539 tagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 49427630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 20 - 213
Target Start/End: Complemental strand, 29762373 - 29762180
Alignment:
Q  20 tcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgctga 119  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||| || || |||||| |||    
T  29762373 tcattcacttgggtggaattaacgaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatacgggtgacgttgatga 29762274  T
Q  120 gatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacct 213  Q
    |||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  29762273 gatcaactgaaaatatcatcaacaacttgattccgccagaagatcatcattagttagggtaaggtgcattccaacttcaacaattgtcttacct 29762180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 18 - 211
Target Start/End: Complemental strand, 39857060 - 39856867
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    |||||| |||||||||||||||||||||||||||||| ||||||| ||||||||| || ||| ||||||| ||||||||||||||||| || ||||||||    
T  39857060 tatcatccacttgggtggaattaacgaacgacgaaaacgtgacgatcatgttttgggagcacgacatgttccagtggatcgatatgcgggtgacgttgct 39856961  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttac 211  Q
    ||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39856960 gagatcaactgaagatatcatcaaaagtttgattctgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttac 39856867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 18 - 214
Target Start/End: Original strand, 3658525 - 3658721
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    |||||||||||||||||||||||||||||||| |||| ||||||| | ||||||| || |||||||||||  ||||||||||||||| ||||||||||||    
T  3658525 tatcattcacttgggtggaattaacgaacgacaaaaacgtgacgaacgtgttttgggagcacaacatgttctagtggatcgatatgcaagtaacgttgct 3658624  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  3658625 gagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattaggtagggtaaggtgcattccaactacaacaatcgtcttacctc 3658721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 18 - 214
Target Start/End: Complemental strand, 12791427 - 12791231
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||  || ||||||||||| ||||||||||||||||| || |||||  |    
T  12791427 tatcattcacttgggtggaattaacgaacgacgaaaacgtgacgagcatttttttggagcacaacatgttccagtggatcgatatgcgggtgacgttttt 12791328  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  12791327 gagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattagttaggataaggtgcattccaactacaacaattgtcttacctc 12791231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 18 - 214
Target Start/End: Complemental strand, 39224351 - 39224155
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    |||||||||||||||||||||||| ||| |||||||| ||||||||||||||||| || ||||||||||| ||||||||||||||||| || ||||||||    
T  39224351 tatcattcacttgggtggaattaaagaatgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtgacgttgct 39224252  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    |||||||||| || |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  39224251 gagatcaactaaatatatcatcaacaacttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattctcttacctc 39224155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 18 - 214
Target Start/End: Complemental strand, 42571930 - 42571734
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||| |||| |||||||||||| |||| |||||||||||| || ||||||||||| ||||||||||||||||| |||||||||||    
T  42571930 tatcattcacttgggtggagttaaagaacgacgaaaacgtgaagagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtaacgttgct 42571831  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    ||||||||||||| |||||||||| || |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  42571830 gagatcaactgaagatatcatcaacaacttgattccgccagaagatcgtcattacttaaggtaaggtgcattccaactacaacaattgtcttacctc 42571734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 22 - 213
Target Start/End: Complemental strand, 27486840 - 27486649
Alignment:
Q  22 attcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgctgaga 121  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||| || ||||||||||| || |||||||||||||| || ||||||||||||    
T  27486840 attcacttgggtggaattaacaaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccattggatcgatatgcgggtgacgttgctgaga 27486741  T
Q  122 tcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacct 213  Q
    ||||||||| |||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27486740 tcaactgaagatatcatcaacaacttgattccgcctgaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacct 27486649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 17 - 214
Target Start/End: Complemental strand, 48568559 - 48568362
Alignment:
Q  17 atatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgc 116  Q
    |||||||||||||||||||| |||| ||| || ||||| ||||||||||||||||| || ||||||||||| ||||||||||||||||| ||||||||||    
T  48568559 atatcattcacttgggtggagttaaagaatgatgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtaacgttgc 48568460  T
Q  117 tgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    |||||||||||||| |||||||||| || |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48568459 tgagatcaactgaagatatcatcaacaacttgatttcgccagaagattgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 48568362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 20 - 213
Target Start/End: Original strand, 51269856 - 51270049
Alignment:
Q  20 tcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgctga 119  Q
    ||||||| ||||||||||||||| ||||||||||| ||||||||||||||||| || |||| |||||| ||||||||||||||||| || |||||||||     
T  51269856 tcattcagttgggtggaattaacaaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagtggatcgatatgcgggtgacgttgctgg 51269955  T
Q  120 gatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacct 213  Q
    ||||||||||| |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  51269956 gatcaactgaagatatcatcaacaacttgattccgccagaagatcgtcattagttagggtaaggtgcattccaacttcaacaattgtcttacct 51270049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 18 - 209
Target Start/End: Complemental strand, 13635451 - 13635260
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||||||||||||||||||||| || |||| ||||||||| || ||||||||||| ||||||||||||||||| || | |||| |    
T  13635451 tatcattcacttgggtggaattaacgaacgacgaaaacgtcacgaccatgttttgggagcacaacatgttccagtggatcgatatgcgggtgaagttggt 13635352  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 209  Q
     |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  13635351 tagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattagttagggtaaggtgcattccaaccacaacaattgtctt 13635260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 20 - 213
Target Start/End: Complemental strand, 44337471 - 44337278
Alignment:
Q  20 tcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgctga 119  Q
    |||||||||||||||||||| || ||||||||||| ||||||||||||||||| |  ||||||||||| ||||||||||||||||| || ||||||||||    
T  44337471 tcattcacttgggtggaattcacaaacgacgaaaacgtgacgagcatgttttgggtgcacaacatgtttcagtggatcgatatgcgggtgacgttgctga 44337372  T
Q  120 gatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacct 213  Q
    ||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||    
T  44337371 gatcaactgaagatatcatcaacaatatgattccgccagaagatcgtcattagttagggtaaggtgcatttcaaatgcaacaattgtcttacct 44337278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 18 - 210
Target Start/End: Complemental strand, 50068413 - 50068221
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||| |||| ||||||| |||||||||||| ||||||||| || |||| |||||| ||||||||||||||||| |||||||||||    
T  50068413 tatcattcacttgggtggatttaaagaacgacaaaaatgtgacgaacatgttttgggagcacatcatgttccagtggatcgatatgcgggtaacgttgct 50068314  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctta 210  Q
    ||||||||||||| ||||| |||| |  ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  50068313 gagatcaactgaagatatcgtcaacagcttgattccgccagaagatcgtcattagttagagtaaggtgcattccaactacaacaattgtctta 50068221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 18 - 209
Target Start/End: Original strand, 19160369 - 19160560
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||||||||||||||||||||| |||||||  |||||||| || |||| |||||| ||||||||||||||||| || | ||||||    
T  19160369 tatcattcacttgggtggaattaacgaacgacgaaaacgtgacgactatgttttgggaacacagcatgttccagtggatcgatatgcgggtgaagttgct 19160468  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 209  Q
     ||||||| |||| |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  19160469 tagatcaattgaagatatcatcaaaagtttgattccgccagaagattgtcattagttagggtaaggtgcattccaactacaacaattgtctt 19160560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 18 - 213
Target Start/End: Original strand, 29436025 - 29436220
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||  ||| |||||| ||||||||||||| ||| || ||||||||    
T  29436025 tatcattcacttgggtggaattaacgaacgacgaaaacgtgacgagcatgttttgggagtacagcatgttccagtggatcgatacgcgggtgacgttgct 29436124  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacct 213  Q
    ||||||||||||| |||||||||| || ||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  29436125 gagatcaactgaagatatcatcaacaacttgattaagccagaagatcgtcattagttagggtaaggtgcattccaactgcaacaattttcttacct 29436220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 18 - 214
Target Start/End: Complemental strand, 41875038 - 41874842
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||| ||||  ||||||||||||||||||||||||||||| || |||||||||||  |||||||||||||||| |||| ||||||    
T  41875038 tatcattcacttgggtggagttaaataacgacgaaaatgtgacgagcatgttttgggagcacaacatgttctagtggatcgatatgcgggtaatgttgct 41874939  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    |||||||||| || ||||||| |  || ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  41874938 gagatcaactaaagatatcattagcaacttgattccgccagaagatcgttattagttagggtaaggtgcattcaaactacaacaattgtcttacctc 41874842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 20 - 213
Target Start/End: Original strand, 44597755 - 44597948
Alignment:
Q  20 tcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgctga 119  Q
    ||||||||||||||||||||||||||||||||||| |||| ||| |||||||| || |||| |||||| ||||||||||||||| | || |||||| |||    
T  44597755 tcattcacttgggtggaattaacgaacgacgaaaacgtgatgagtatgttttgggagcacagcatgttccagtggatcgatatgtgggtgacgttgatga 44597854  T
Q  120 gatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacct 213  Q
    ||||||||||| |||||||||| || ||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  44597855 gatcaactgaagatatcatcaacaacttgattccgccggaagatcgtcattagttagggtaaagtgcattccaacttcaacaattgtcttacct 44597948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 18 - 214
Target Start/End: Complemental strand, 46180435 - 46180238
Alignment:
Q  18 tatcattcact-tgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgc 116  Q
    ||||||||||| |||||||| |||| |||||||||||| ||||||||||||||||| || |||| |||||| ||||||||||||||| | |||||||||     
T  46180435 tatcattcactctgggtggagttaaagaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagtggatcgatatgtgggtaacgttgt 46180336  T
Q  117 tgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    ||||||||| |||| |||||||||| |  ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46180335 tgagatcaattgaagatatcatcaacagcttgattctgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 46180238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 17 - 214
Target Start/End: Complemental strand, 47488192 - 47487995
Alignment:
Q  17 atatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgc 116  Q
    |||||||||||||||||||| |||| |||||||||||| ||||||||||||||||| || ||||| || ||  ||| |||||||||||| ||||||||||    
T  47488192 atatcattcacttgggtggagttaaagaacgacgaaaacgtgacgagcatgttttgggagcacaatattttctagttgatcgatatgcgggtaacgttgc 47488093  T
Q  117 tgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    |||||||||||||| || ||||||| |  |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  47488092 tgagatcaactgaagatgtcatcaacagcttgatttcgccagaagatcgtcattagttatggtaaggtgcattccaactacaacaattgtcttacctc 47487995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 18 - 214
Target Start/End: Complemental strand, 27035472 - 27035276
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||| |||| ||| |||||||| |||||||| |||||||| ||  ||| ||| || ||||||||||||||||| |||||||||||    
T  27035472 tatcattcacttgggtggagttaaagaatgacgaaaacgtgacgagtatgttttgggagaacaccatattccagtggatcgatatgcgggtaacgttgct 27035373  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    |||||||||| || |||||||||| || |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  27035372 gagatcaacttaagatatcatcaacaacttgattccaccagaagatcgtcattagttaggataaggtgcattccaactacaacaattgtcttacctc 27035276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 19 - 172
Target Start/End: Original strand, 36909614 - 36909767
Alignment:
Q  19 atcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgctg 118  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| ||||||||||||||||| || |||||||||    
T  36909614 atcattcacttgggtggaattaacgaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtgacgttgctg 36909713  T
Q  119 agatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  36909714 agatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattag 36909767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 17 - 209
Target Start/End: Complemental strand, 14173913 - 14173718
Alignment:
Q  17 atatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgc 116  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||  |||||||||| ||||||||||||||||| || |||||||    
T  14173913 atatcattcacttgggtggaattaacgaacgacgaaaacgtgacgagcatgttttgggaggacaacatgttccagtggatcgatatgcgggtgacgttgc 14173814  T
Q  117 tgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaag-gtgca--ttccaactacaacaattgtctt 209  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||||||||||| || |||| |  ||||  ||||| ||||||||||||||||    
T  14173813 tgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattaggtacggtatgaatgcaccttccagctacaacaattgtctt 14173718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 18 - 214
Target Start/End: Complemental strand, 49263142 - 49262946
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||| ||||||||||| || |||||||| ||||||||||||||||| || ||||||||||| ||||||||| ||||||  ||||||||| |    
T  49263142 tatcattcacttgagtggaattaacaaaagacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatctatatgctggtaacgttgtt 49263043  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    ||||||||||||| |||||||||| |  |||||||| | |||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  49263042 gagatcaactgaagatatcatcaacatcttgattcctctagaatatcttcattagttatggtaaggtgcattccaactacaacaattgtcttacctc 49262946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 18 - 214
Target Start/End: Complemental strand, 30309980 - 30309790
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||||||||| || ||||  | ||| ||||||||||||||||| || |||         
T  30309980 tatcattcacttgggtggaattaaagaacgacgaaaacgtgacgagcatgttttgggagcacaggacgtttcagtggatcgatatgcgggtgacg----- 30309886  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
     |||||||||||| |||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  30309885 -agatcaactgaatatatcatcaacagcttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattatcttacctc 30309790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 18 - 172
Target Start/End: Original strand, 6435824 - 6435978
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |||||| || ||||||||||| ||||||||||||||| |||| |||||| |    
T  6435824 tatcattcacttgggtggaattaacgaacgacgaaaacgtgacgagcaagttttgggagcacaacatgttccagtggatcgatatgtgagtgacgttgtt 6435923  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    |||||||| |||| |||||||||||| ||||||||||||||||||||||||||||    
T  6435924 gagatcaagtgaagatatcatcaaaagtttgattccgccagaagatcgtcattag 6435978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 18 - 164
Target Start/End: Complemental strand, 24270517 - 24270371
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||  || ||||||||||| ||||||||||||||||| || ||||||||    
T  24270517 tatcattcacttgggtggaattaacgaacgacgaaaacgtgacgagcatgttttaggagcacaacatgttccagtggatcgatatgcgggtgacgttgct 24270418  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatc 164  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||    
T  24270417 gagatcaactgaagatatcatcaaaagtttgattccgccagaagatc 24270371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 18 - 173
Target Start/End: Complemental strand, 35587083 - 35586928
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||| || ||||||||||| ||||||||||||||||| || || |||||    
T  35587083 tatcattcacttgggtggaattaacaaacgacgaaaacgtgacgaacatgttttgggagcacaacatgttccagtggatcgatatgcgggtgaccttgct 35586984  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagt 173  Q
    |||||||| |||| |||||||||||| |||||||||||||||||||||||||||||    
T  35586983 gagatcaattgaagatatcatcaaaagtttgattccgccagaagatcgtcattagt 35586928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 18 - 172
Target Start/End: Original strand, 13972976 - 13973130
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| ||||||||| ||||||| || || |||||    
T  13972976 tatcattcacttgggtggaattaacgaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcaatatgcgggtgacattgct 13973075  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    |||||||| |||| |||||||||||| ||||||||||||| ||||||||||||||    
T  13973076 gagatcaattgaagatatcatcaaaagtttgattccgccataagatcgtcattag 13973130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 18 - 172
Target Start/End: Original strand, 37778131 - 37778285
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    |||||||||||||||||||||||| | |||||||||| ||||||||||||||||| ||  |||||||||| |||| |||||||||||| || ||||||||    
T  37778131 tatcattcacttgggtggaattaaaggacgacgaaaacgtgacgagcatgttttgggagaacaacatgttccagttgatcgatatgcgggtgacgttgct 37778230  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  37778231 gagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattag 37778285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 18 - 172
Target Start/End: Original strand, 49396756 - 49396910
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||| || ||||||||||| |||||||| |||||||| || ||||||||    
T  49396756 tatcattcacttgagtggaattaacgaacaacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggattgatatgcgggtgacgttgct 49396855  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    ||||||||||||| |||||| ||||| ||||||||||||||||||||||||||||    
T  49396856 gagatcaactgaagatatcaacaaaagtttgattccgccagaagatcgtcattag 49396910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 20 - 172
Target Start/End: Complemental strand, 49926532 - 49926380
Alignment:
Q  20 tcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgctga 119  Q
    ||||||||||| | ||||||||||||||||||||| |||| |||||||||||| || ||||||||||| ||||||||||||||||  || ||||||||||    
T  49926532 tcattcacttgtgcggaattaacgaacgacgaaaacgtgaggagcatgttttgggagcacaacatgttccagtggatcgatatgcaggtgacgttgctga 49926433  T
Q  120 gatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  49926432 gatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattag 49926380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 17686515 - 17686361
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    |||||||||||||||| ||||||||||| |||||||| |||| |||||||||||| || |||||||| || ||||||||||||||||| || |||| |||    
T  17686515 tatcattcacttgggttgaattaacgaatgacgaaaacgtgaagagcatgttttgggagcacaacatcttccagtggatcgatatgcgggtgacgtagct 17686416  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  17686415 gagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattag 17686361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 38046588 - 38046434
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| || ||||||||||| |||| |||| ||||||  || ||||||||    
T  38046588 tatcattcacttgggtggaattaacgaacgacgaaaacgtgacaagcatgttttgggagcacaacatgttccagtcgatcaatatgccggtgacgttgct 38046489  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    ||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||    
T  38046488 gagatcaactgaagatatcatcaaaagtttgattccaccagaagatcgtcattag 38046434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 18 - 172
Target Start/End: Original strand, 23342693 - 23342847
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||||||||  || ||||  |||||  |||||||||||||||| |||||||||||    
T  23342693 tatcattcacttgggttgaattaacgaacgacgaaaacgtgacgagcatgtttttggagcacattatgttcgagtggatcgatatgcgggtaacgttgct 23342792  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    ||||| ||||||| |||||||||||| ||||||||| ||||||||||||||||||    
T  23342793 gagataaactgaagatatcatcaaaagtttgattcctccagaagatcgtcattag 23342847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 18 - 209
Target Start/End: Original strand, 17697098 - 17697288
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||| |||| | |||||||||| ||||||||||||||||| || ||||||||||| ||||||||||||||||| || ||||||||    
T  17697098 tatcattcacttgggtggagttaaagtacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtgacgttgct 17697197  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 209  Q
    ||||||||||||| |||| ||||| | | |||||||||||||||||||| ||||| || || || |  | |||||||||||||| |||||||    
T  17697198 gagatcaactgaagatattatcaagagtctgattccgccagaagatcgtgattaggtaagg-aatgcaccttccaactacaacagttgtctt 17697288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 48215250 - 48215409
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||| |||||||||||||||||||||||  |||||||||| ||||  || |||| |||||| ||||||||||||||||| || | ||||||    
T  48215250 tatcattcacttgagtggaattaacgaacgacgaaaacatgacgagcatatttttggagcacagcatgttccagtggatcgatatgcgggtgaagttgct 48215349  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagg 177  Q
     |||||||||||| |||||||||||| ||||||||||||||||||| |||||||||||||    
T  48215350 tagatcaactgaagatatcatcaaaagtttgattccgccagaagatagtcattagttagg 48215409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 18 - 172
Target Start/End: Original strand, 18170077 - 18170231
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||| |||| |||||||||||| ||||||||||||||||| || |||| |||||| |||| |||||||||||| || || |||||    
T  18170077 tatcattcacttgggtggagttaaagaacgacgaaaacgtgacgagcatgttttgggagcacatcatgttccagtagatcgatatgcgggtgacattgct 18170176  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    ||| ||||||||| |||||||||||  ||||||||||||||||||||||||||||    
T  18170177 gagctcaactgaagatatcatcaaaggtttgattccgccagaagatcgtcattag 18170231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 17 - 210
Target Start/End: Original strand, 5765257 - 5765449
Alignment:
Q  17 atatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgc 116  Q
    |||||||||| |||||||||||||||||||||| ||||  ||| |||||||||||| || || ||||||||  |||||||||||||||| ||||||||||    
T  5765257 atatcattcagttgggtggaattaacgaacgacaaaaacttgatgagcatgttttgggagcagaacatgttctagtggatcgatatgcgggtaacgttgc 5765356  T
Q  117 tgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctta 210  Q
    ||||||||| |||| |||| |||||   | |||||||||||||||||||| ||||| ||||| || |  | |||||||||||||||||||||||    
T  5765357 tgagatcaaatgaagatattatcaaccgtctgattccgccagaagatcgtgattaggtaggg-aatgcaccttccaactacaacaattgtctta 5765449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 25 - 209
Target Start/End: Original strand, 17372786 - 17372970
Alignment:
Q  25 cacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgctgagatca 124  Q
    ||||| |||||||||| |||||||||||||||||| || ||||||||| || |||| ||| || |||||||||||||| || ||||||||| ||||||||    
T  17372786 cacttaggtggaattagcgaacgacgaaaatgtgaagaacatgttttgggagcacaccatattccagtggatcgatatacgtgtaacgttgatgagatca 17372885  T
Q  125 actgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 209  Q
    |||||| |||||||| ||| ||| ||| |||||||||||||||||||| || || || |  | ||||||||||||||||||||||    
T  17372886 actgaagatatcatcgaaagtttaatttcgccagaagatcgtcattaggtatggaaatgcaccttccaactacaacaattgtctt 17372970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 18 - 214
Target Start/End: Complemental strand, 49599028 - 49598849
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||| ||||| |||| ||| |||||||  ||||| ||||||||||| || ||||||||||| ||||||||||||||||| |||||||||||    
T  49599028 tatcattcacttgagtggagttaaagaatgacgaaac-gtgacaagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtaacgttgct 49598930  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    |||||||||                || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  49598929 gagatcaac----------------aacttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaatcgtcttacctc 49598849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 17 - 178
Target Start/End: Original strand, 18842490 - 18842651
Alignment:
Q  17 atatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgc 116  Q
    |||||||| | ||||||||||||||||||||||||||| ||||||||||||||||| || |||  |||||| ||||||||||||||||| ||||||||||    
T  18842490 atatcatttagttgggtggaattaacgaacgacgaaaacgtgacgagcatgttttgggagcacggcatgttccagtggatcgatatgcgggtaacgttgc 18842589  T
Q  117 tgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttaggg 178  Q
    |||||||||||||| ||||  |||| | | |||| ||||||||||||||  ||||| |||||    
T  18842590 tgagatcaactgaagatattgtcaagagtctgatcccgccagaagatcgggattaggtaggg 18842651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 18 - 172
Target Start/End: Original strand, 35185022 - 35185177
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgag-accacaacatgttacagtggatcgatatgcgagtaacgttgc 116  Q
    |||||||||||| | |||||||||||||||||||||| ||||||| ||||||||| | | |||  |||||| ||||||||||||||||  || |||||||    
T  35185022 tatcattcactttgatggaattaacgaacgacgaaaacgtgacgaacatgttttggggagcacggcatgttccagtggatcgatatgcaggtgacgttgc 35185121  T
Q  117 tgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    ||| ||||| |||| |||||||||||| ||||||||||||||||||||||||||||    
T  35185122 tgaaatcaattgaagatatcatcaaaagtttgattccgccagaagatcgtcattag 35185177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 17 - 172
Target Start/End: Original strand, 41780744 - 41780899
Alignment:
Q  17 atatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgc 116  Q
    |||||||||||||||||||||||||||||||||||||| |||||||  || ||||| || |||| |||||| |||| ||| |||||||  || |||||||    
T  41780744 atatcattcacttgggtggaattaacgaacgacgaaaacgtgacgaatatattttgggagcacagcatgttccagtagatagatatgcaggtgacgttgc 41780843  T
Q  117 tgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    | |||||||||||| |||||||||||| ||||||| ||||||||| ||||||||||    
T  41780844 taagatcaactgaatatatcatcaaaagtttgatttcgccagaagttcgtcattag 41780899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 18 - 160
Target Start/End: Complemental strand, 35526331 - 35526189
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    |||||||||| ||||||||||||||||||| |||||| | ||||| ||||||||| || ||||  ||||| ||||||||||||||||| || ||||||||    
T  35526331 tatcattcacctgggtggaattaacgaacgtcgaaaacgagacgaccatgttttgggagcacagaatgttgcagtggatcgatatgcgggtgacgttgct 35526232  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaa 160  Q
    ||||||||||||| |||||||||||| ||||||||||| ||||    
T  35526231 gagatcaactgaagatatcatcaaaagtttgattccgctagaa 35526189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 18 - 209
Target Start/End: Original strand, 13283757 - 13283947
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||| | ||||||| ||||||||||||| |||||  |||||||||||||||| || | || ||||||  |||||||||||||||  |||||||||||    
T  13283757 tatcatttagttgggtgaaattaacgaacgatgaaaacatgacgagcatgttttgggagcgcagcatgttctagtggatcgatatgcaggtaacgttgct 13283856  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 209  Q
    ||||||||||||| |||| ||||| | | |||||||||||||||||||| ||||| ||| | || |  | ||||||||||||||||||||||    
T  13283857 gagatcaactgaatatattatcaacagtctgattccgccagaagatcgtgattaggtagag-aatgcaccttccaactacaacaattgtctt 13283947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 92 - 209
Target Start/End: Complemental strand, 29707621 - 29707504
Alignment:
Q  92 tggatcgatatgcgagtaacgttgctgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattcc 191  Q
    |||||||||||||| || |||||||||||||||||| || |||||||||||| ||||||||||| ||||||||||||| |||||||| |||||||||| |    
T  29707621 tggatcgatatgcgggtgacgttgctgagatcaactaaagatatcatcaaaagtttgattccgctagaagatcgtcataagttagggcaaggtgcattac 29707522  T
Q  192 aactacaacaattgtctt 209  Q
    |||| |||||||||||||    
T  29707521 aactgcaacaattgtctt 29707504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 17 - 212
Target Start/End: Complemental strand, 16532245 - 16532051
Alignment:
Q  17 atatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgc 116  Q
    |||||||| | |||||||||||||||||||||||||||||||| |||||| || || || || | |||| |  | ||||| |||||||| ||||||||||    
T  16532245 atatcattaagttgggtggaattaacgaacgacgaaaatgtgatgagcatattatgggagcagagcatgctctaatggattgatatgcgtgtaacgttgc 16532146  T
Q  117 tgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgca--ttccaactacaacaattgtcttacc 212  Q
    |||||||||||||| |||| ||||| | | ||||| ||| |||||||||| ||||| || || |   ||||  |||||||||||||||||||||||||    
T  16532145 tgagatcaactgaagatattatcaatagtctgatttcgctagaagatcgtgattaggtatggaa---tgcatcttccaactacaacaattgtcttacc 16532051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 17 - 209
Target Start/End: Complemental strand, 24363955 - 24363764
Alignment:
Q  17 atatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgc 116  Q
    |||||| |||||||||| ||||||| |||||||||||| |||| || ||||||||| |  ||||  |||||  ||||||||||||||||  ||||||||     
T  24363955 atatcaatcacttgggtagaattaatgaacgacgaaaacgtgaagaacatgttttgggggcacagtatgttctagtggatcgatatgcggttaacgttgt 24363856  T
Q  117 tgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 209  Q
    ||||| |||||||| |||| ||||| | ||||||||||  |||||||||| ||||| ||||| || |  | ||||||||||||||||||||||    
T  24363855 tgagagcaactgaagatattatcaagagtttgattccgttagaagatcgtgattaggtaggg-aatgcaccttccaactacaacaattgtctt 24363764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 82 - 172
Target Start/End: Complemental strand, 40533376 - 40533286
Alignment:
Q  82 catgttacagtggatcgatatgcgagtaacgttgctgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    |||||| ||||||||||||||||| |||||||||| ||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||    
T  40533376 catgttccagtggatcgatatgcgggtaacgttgccgagatcaactgaagatatcatcaaaagtttaattccgccagaagatcgtcattag 40533286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 211
Target Start/End: Original strand, 16081336 - 16081529
Alignment:
Q  17 atatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgc 116  Q
    |||||||||| || ||||||||||||||||||||| ||  ||| |||||||||||  || |||||||||||  ||| |||||||||||| ||||||||||    
T  16081336 atatcattcagttaggtggaattaacgaacgacgataacatgaggagcatgtttttggagcacaacatgttctagttgatcgatatgcgtgtaacgttgc 16081435  T
Q  117 tgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttac 211  Q
    ||  ||||||||| |||||  | || | ||| |||| ||| ||||||||| ||||| ||||| || |  | ||||| ||||||||||||||||||    
T  16081436 tgcaatcaactgagaatatactgaagagtttaattctgccggaagatcgtgattaggtaggg-aatgcaccttccagctacaacaattgtcttac 16081529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 13148371 - 13148450
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatc 97  Q
    ||||||||||||||||||||||||||||||||||||| |||| || |||||||||||| ||||||||||| |||||||||    
T  13148371 tatcattcacttgggtggaattaacgaacgacgaaaacgtgaagaacatgttttgagagcacaacatgttccagtggatc 13148450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 139 - 209
Target Start/End: Original strand, 22527680 - 22527750
Alignment:
Q  139 caaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 209  Q
    ||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  22527680 caaaagtttgatttcgccagaagatcatcattagttagggtaaggtgcattccaactacaacaattgtctt 22527750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 48226760 - 48226799
Alignment:
Q  167 cattagttagggtaaggtgcattccaactacaacaattgt 206  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  48226760 cattagttagggtaaggtgcattccaactacaacaattgt 48226799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 213
Target Start/End: Original strand, 21484432 - 21484465
Alignment:
Q  180 aaggtgcattccaactacaacaattgtcttacct 213  Q
    ||||||||||||||||||||||||||||||||||    
T  21484432 aaggtgcattccaactacaacaattgtcttacct 21484465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 213
Target Start/End: Original strand, 29707196 - 29707226
Alignment:
Q  183 gtgcattccaactacaacaattgtcttacct 213  Q
    |||||||||||||||||||||||||||||||    
T  29707196 gtgcattccaactacaacaattgtcttacct 29707226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 213
Target Start/End: Original strand, 30309490 - 30309520
Alignment:
Q  183 gtgcattccaactacaacaattgtcttacct 213  Q
    |||||||||||||||||||||||||||||||    
T  30309490 gtgcattccaactacaacaattgtcttacct 30309520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 213
Target Start/End: Original strand, 41874543 - 41874573
Alignment:
Q  183 gtgcattccaactacaacaattgtcttacct 213  Q
    |||||||||||||||||||||||||||||||    
T  41874543 gtgcattccaactacaacaattgtcttacct 41874573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 213
Target Start/End: Original strand, 47487694 - 47487724
Alignment:
Q  183 gtgcattccaactacaacaattgtcttacct 213  Q
    |||||||||||||||||||||||||||||||    
T  47487694 gtgcattccaactacaacaattgtcttacct 47487724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 213
Target Start/End: Original strand, 48568063 - 48568093
Alignment:
Q  183 gtgcattccaactacaacaattgtcttacct 213  Q
    |||||||||||||||||||||||||||||||    
T  48568063 gtgcattccaactacaacaattgtcttacct 48568093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 213
Target Start/End: Original strand, 50067916 - 50067946
Alignment:
Q  183 gtgcattccaactacaacaattgtcttacct 213  Q
    |||||||||||||||||||||||||||||||    
T  50067916 gtgcattccaactacaacaattgtcttacct 50067946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 213
Target Start/End: Complemental strand, 51270349 - 51270319
Alignment:
Q  183 gtgcattccaactacaacaattgtcttacct 213  Q
    |||||||||||||||||||||||||||||||    
T  51270349 gtgcattccaactacaacaattgtcttacct 51270319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 163
Target Start/End: Complemental strand, 19262475 - 19262422
Alignment:
Q  110 acgttgctgagatcaactgaaaatatcatcaaaaatttgattccgccagaagat 163  Q
    ||||||||||||||||||||| ||||  |||| | |||||||||||| ||||||    
T  19262475 acgttgctgagatcaactgaagatattctcaacagtttgattccgcctgaagat 19262422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 211
Target Start/End: Original strand, 39223856 - 39223884
Alignment:
Q  183 gtgcattccaactacaacaattgtcttac 211  Q
    |||||||||||||||||||||||||||||    
T  39223856 gtgcattccaactacaacaattgtcttac 39223884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 157; Significance: 1e-83; HSPs: 70)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 18 - 214
Target Start/End: Complemental strand, 34693443 - 34693247
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| || ||||||||||| ||||||||||||||||| || ||||||||    
T  34693443 tatcattcacttgggtggaattaacaaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtgacgttgct 34693344  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  34693343 gagatcaactgaagatatcatcaaaactttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactgcaacaattgtcttacctc 34693247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 17 - 213
Target Start/End: Original strand, 44927528 - 44927724
Alignment:
Q  17 atatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgc 116  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| ||||||||||||||||| || ||||||     
T  44927528 atatcattcacttgggtggaattaacgaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtgacgttgt 44927627  T
Q  117 tgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacct 213  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  44927628 tgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactgcaacaattgtcttacct 44927724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 18 - 214
Target Start/End: Original strand, 47065753 - 47065949
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||| |||| |||||| ||||||||||||||||||||||| || |||||||||||  |||||||||||||||| |||||||||||    
T  47065753 tatcattcacttgggtggagttaaagaacgaggaaaatgtgacgagcatgttttgggagcacaacatgttctagtggatcgatatgcgggtaacgttgct 47065852  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    ||||||||||||| ||||||| || || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47065853 gagatcaactgaagatatcattaacaacttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 47065949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 18 - 214
Target Start/End: Complemental strand, 39417101 - 39416905
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||| |||| |||||||||||| |||| |||||||||||| || ||||||||||| ||||||||||||||||| |||||||||||    
T  39417101 tatcattcacttgggtggagttaaagaacgacgaaaacgtgatgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtaacgttgct 39417002  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    ||||||||||||| |||||||||| |  |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39417001 gagatcaactgaagatatcatcaatagcttgatttcgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 39416905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 18 - 214
Target Start/End: Complemental strand, 53826849 - 53826653
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    |||||||||||||||| || |||| ||||||||||||||||| |||||||||||| || ||||||||||| || |||||||||||||  |||||||||||    
T  53826849 tatcattcacttgggtagagttaaagaacgacgaaaatgtgatgagcatgttttgggagcacaacatgttccaatggatcgatatgcatgtaacgttgct 53826750  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    ||||||||||||| |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53826749 gagatcaactgaagatatcatcaacaacttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 53826653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 18 - 214
Target Start/End: Complemental strand, 13896023 - 13895827
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| || |||| |||||| ||||||||||||||||| || ||||||||    
T  13896023 tatcattcacttgggtggaattaacgagcgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagtggatcgatatgcgggtgacgttgct 13895924  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    ||||||||||||| ||||||||||||  |||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  13895923 gagatcaactgaagatatcatcaaaagcttgattccgctagaagatcgtcattagttaaggtaaggtgcattccaactgcaacaattgtcttacctc 13895827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 18 - 214
Target Start/End: Complemental strand, 19453382 - 19453186
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| || || ||||||||||| || |||||||||||||| || ||||||||    
T  19453382 tatcattcacttgggtggaattaacgaacgacgaaaacgtgacgagcatgttatgggagcacaacatgttccaatggatcgatatgcgggtgacgttgct 19453283  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    |||||||||| || |||||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  19453282 gagatcaactaaagatatcatcaaaagtttgattccaccagaagatcatcattagttagggtaaggtgcattccaactacaacaattctcttacctc 19453186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 18 - 214
Target Start/End: Original strand, 42383117 - 42383313
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||| |||| |||||||||||| ||||||||||||||||| || |||| |||||| ||||||||||||||||| |||||||||||    
T  42383117 tatcattcacttgggtggagttaaagaacgacgaaaacgtgacgagcatgttttgggagcacatcatgttccagtggatcgatatgcgggtaacgttgct 42383216  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    ||||||||||||| |||||||||| || ||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||    
T  42383217 gagatcaactgaagatatcatcaacaagttgattccgccagaagatcgtcattagttgggacaaggtgcattccaactacaacaattgtcttacctc 42383313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 18 - 214
Target Start/End: Complemental strand, 42950173 - 42949977
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    |||||||||||||| |||| |||| ||| |||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||  | ||||||||    
T  42950173 tatcattcacttggatggagttaaagaatgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcggtttacgttgct 42950074  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    ||||||||||||| |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42950073 gagatcaactgaagatatcatcaacaacttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 42949977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 18 - 206
Target Start/End: Original strand, 50997454 - 50997642
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| |||| |||||||||||| || | ||||||    
T  50997454 tatcattcacttgagtggaattaacgaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagttgatcgatatgcgggtgaagttgct 50997553  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgt 206  Q
     |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50997554 tagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgt 50997642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 18 - 209
Target Start/End: Complemental strand, 2647029 - 2646838
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| || |||| |||||| ||||||||||||||||| || | ||||||    
T  2647029 tatcattcacttgggtggaattaacgaacgacgaaaacgtgacgaccatgttttgggagcacagcatgttccagtggatcgatatgcgggtgaagttgct 2646930  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 209  Q
     |||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2646929 tagatcaactgaagatatcatcaaaagtttgattccgctagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 2646838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 18 - 214
Target Start/End: Complemental strand, 48087705 - 48087509
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    |||||||||| |||||||| |||| |||||||||||| ||||||||||||||||| || |||||||| || ||||||||||||||||| |||||||||||    
T  48087705 tatcattcacctgggtggagttaaagaacgacgaaaacgtgacgagcatgttttgggagcacaacatattccagtggatcgatatgcgggtaacgttgct 48087606  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    ||||||||||||| |||||||||| |  |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  48087605 gagatcaactgaagatatcatcaacagcttgattccaccagaagatcgtcattaattagggtaaggtgcattccaactacaacaattgtcttacctc 48087509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 17 - 213
Target Start/End: Complemental strand, 49218890 - 49218694
Alignment:
Q  17 atatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgc 116  Q
    |||||||||||||||||||||||||| |||| |||||| ||||||| ||||||||| || | ||||||||| |||||||||||||||||||| |||||||    
T  49218890 atatcattcacttgggtggaattaacaaacggcgaaaacgtgacgaacatgttttgggagcgcaacatgttccagtggatcgatatgcgagtgacgttgc 49218791  T
Q  117 tgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacct 213  Q
    |||||||||||||| |||| ||||| || |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  49218790 tgagatcaactgaagatattatcaacaacttgattccgccagaagatcgtcattagttagggtaaagtgcattccaactgcaacaattgtcttacct 49218694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 18 - 209
Target Start/End: Complemental strand, 2268647 - 2268456
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    |||||||||||||| |||||||||||||||||||||| |||||| |||||||||| || |||| |||||| |||| |||||||||||| || | ||||||    
T  2268647 tatcattcacttggatggaattaacgaacgacgaaaacgtgacgggcatgttttgggagcacatcatgttccagtagatcgatatgcgggtgaagttgct 2268548  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 209  Q
     |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2268547 tagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 2268456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 18 - 209
Target Start/End: Complemental strand, 3495182 - 3494991
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| || ||||||||||| ||||||||||||||||| || | |||| |    
T  3495182 tatcattcacttgggtggaattaacgaacgacgaaaacgtgacgaccatgttttgggagcacaacatgttccagtggatcgatatgcgggtgaagttgtt 3495083  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 209  Q
     ||||||||| || |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3495082 tagatcaacttaagatatcatcaaaagtttgattctgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 3494991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 20 - 211
Target Start/End: Original strand, 49610557 - 49610748
Alignment:
Q  20 tcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgctga 119  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||| || ||||  ||||| |||||| |||||||||| || ||||||||||    
T  49610557 tcattcacttgggtggaattaacaaacgacgaaaacgtgacgagcatgttttgggagcacagtatgttccagtgggtcgatatgcgggtgacgttgctga 49610656  T
Q  120 gatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttac 211  Q
    ||||||||||| |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  49610657 gatcaactgaagatatcatcaacaacttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactgcaacaattgtcttac 49610748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 17 - 214
Target Start/End: Complemental strand, 24702425 - 24702229
Alignment:
Q  17 atatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgc 116  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||  ||||||||| || ||||||||||| ||||||||||||||||  || ||||||     
T  24702425 atatcattcacttgggtggaatta-cgaacgacgaaaacgtgacggacatgttttgggagcacaacatgttccagtggatcgatatgcaggtgacgttgt 24702327  T
Q  117 tgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    |||||||||||||| ||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  24702326 tgagatcaactgaagatatcatcaaaagcttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactgcaacaattgtcttacctc 24702229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 18 - 214
Target Start/End: Complemental strand, 25576744 - 25576549
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||| |||| |||||||||||| ||||||||||||||||| || |||| |||||| || |||||||||||||| |||||||||||    
T  25576744 tatcattcacttgggtggagttaaagaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttcca-tggatcgatatgcgggtaacgttgct 25576646  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    ||||||||||||| |||||||||| |  ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  25576645 gagatcaactgaagatatcatcaatagcttgattccgtcagaagatcgtcattatttagggtaaggtgcattccaactacaacaattgtcttacctc 25576549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 18 - 206
Target Start/End: Original strand, 34049793 - 34049981
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||| || |||| |||||| ||||||||||||||||| || | ||||||    
T  34049793 tatcattcagttgggtggaattaacgaacgacgaaaacgtgacgaccatgttttgggagcacagcatgttccagtggatcgatatgcgggtgaagttgct 34049892  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgt 206  Q
     |||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  34049893 tagatcaactgaagatatcatcaaaagtttgattccgccacaagatcgtcattagttagggtaaggtgcattccaactacaacaattgt 34049981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 18 - 210
Target Start/End: Original strand, 42382337 - 42382529
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||| |||| |||||||||||| ||||||||||||||||| || |||| |||||| ||||||||||||||||| |||||||||||    
T  42382337 tatcattcacttgggtggagttaaagaacgacgaaaacgtgacgagcatgttttgggagcacatcatgttccagtggatcgatatgcgggtaacgttgct 42382436  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctta 210  Q
    ||||||||||||| |||||||||| || ||||||||||||||||||||||||||||| ||  || ||||||||||||||||||||||||||||    
T  42382437 gagatcaactgaagatatcatcaacaagttgattccgccagaagatcgtcattagttgggacaatgtgcattccaactacaacaattgtctta 42382529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 18 - 206
Target Start/End: Complemental strand, 49140207 - 49140019
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||| || |||| |||||| ||||||||||||||||| || | ||||||    
T  49140207 tatcattcagttgggtggaattaacgaacgacgaaaacgtgacgaccatgttttgggagcacagcatgttccagtggatcgatatgcgggtgaagttgct 49140108  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgt 206  Q
     |||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  49140107 tagatcaactgaagatatcatcaaaagtttgattccgccacaagatcgtcattagttagggtaaggtgcattccaactacaacaattgt 49140019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 18 - 206
Target Start/End: Original strand, 54390508 - 54390696
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||| || |||| |||||| ||||||||||||||||| || | ||||||    
T  54390508 tatcattcagttgggtggaattaacgaacgacgaaaacgtgacgaccatgttttgggagcacagcatgttccagtggatcgatatgcgggtgaagttgct 54390607  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgt 206  Q
     |||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  54390608 tagatcaactgaagatatcatcaaaagtttgattccgccacaagatcgtcattagttagggtaaggtgcattccaactacaacaattgt 54390696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 18 - 209
Target Start/End: Complemental strand, 4004240 - 4004049
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    |||||||||| ||||||||||||||||||||| |||| ||||||||||||||||| || |||| |||||| ||||||||||||||||| || | ||||||    
T  4004240 tatcattcacgtgggtggaattaacgaacgacaaaaacgtgacgagcatgttttgggagcacagcatgttccagtggatcgatatgcgggtgaagttgct 4004141  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 209  Q
     |||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  4004140 tagatcaactgaagatatcatcaaaagtttgattctgccagaagatcgtcattagttagagtaaggtgcattccaactacaacaattgtctt 4004049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 18 - 209
Target Start/End: Original strand, 36135073 - 36135264
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||| |||||| |||| |||||||||||| || | ||||||    
T  36135073 tatcattcacttgggtggaattaacgaacgacgaaaacgtgacgagcatgttttgggagcacatcatgtttcagtagatcgatatgcgggtgaagttgct 36135172  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 209  Q
     |||||||||||| |||||||||||| ||||||||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||    
T  36135173 tagatcaactgaagatatcatcaaaagtttgattccgccagaagattgtcattagttagagtaagatgcattccaactacaacaattgtctt 36135264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 20 - 211
Target Start/End: Complemental strand, 51695757 - 51695566
Alignment:
Q  20 tcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgctga 119  Q
    ||||||||||||||||||||||| ||||||||| | ||||||||||||||||| || |||| |||||| ||||||||||||||||| || ||||||||||    
T  51695757 tcattcacttgggtggaattaacaaacgacgaatacgtgacgagcatgttttgggagcacatcatgttccagtggatcgatatgcgggtgacgttgctga 51695658  T
Q  120 gatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttac 211  Q
    ||||||||||| |||||||||| || ||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||    
T  51695657 gatcaactgaagatatcatcaacaacttgattccgccagaagatcatcattagttagggtaaggtgcattccaactgcaataattgtcttac 51695566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 18 - 206
Target Start/End: Original strand, 46403069 - 46403257
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||| || |||| |||||| ||||||||||||||||| || | ||||||    
T  46403069 tatcattcagttgggtggaattaacgaacgacgaaaacgtgacgaccatgttttgggagcacagcatgttccagtggatcgatatgcgggtgaagttgct 46403168  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgt 206  Q
     |||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  46403169 tagatcaactgaagatatcatcaaaagtttgattccgccacaagatcgtcattagttagggtaaggtgcattccaactacaacatttgt 46403257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 55207037 - 55206883
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||| || ||||||||    
T  55207037 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtgacgttgct 55206938  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  55206937 gagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattag 55206883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 18 - 213
Target Start/End: Complemental strand, 44835640 - 44835445
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||| ||||||||| |||| |||||||||||| ||||||||||||||||| || || |  ||||| |||||||| |||||||| |||| |||| |    
T  44835640 tatcattcatttgggtggagttaaagaacgacgaaaacgtgacgagcatgttttgggagcatagaatgttccagtggatggatatgcgggtaaggttgtt 44835541  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacct 213  Q
    |||||||||||||||||||||||| |  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44835540 gagatcaactgaaaatatcatcaacagcttgattccgtcagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacct 44835445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 20 - 213
Target Start/End: Original strand, 43477125 - 43477318
Alignment:
Q  20 tcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgctga 119  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||||||| || |||| |||||| ||||||||||||||||  || |||||| |||    
T  43477125 tcattcacttgggtggaattaacgaacgacgaaaacgtgacgaacatgttttgggagcacagcatgttccagtggatcgatatgcaggtgacgttgatga 43477224  T
Q  120 gatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacct 213  Q
    ||||||| ||| |||||||||| || |||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||| ||||||||||    
T  43477225 gatcaaccgaagatatcatcaacaacttgattccgccagaagatcgtcattaattagggtaatgtgcattccaacttcaacaactgtcttacct 43477318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 34472229 - 34472075
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| ||||||||||||||||| || ||||||||    
T  34472229 tatcattcacttgggtggaattaacgaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtgacgttgct 34472130  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    ||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||    
T  34472129 gagatcaactgaagatatcatcaaaagttttattccgccagaagatcgtcattag 34472075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 18 - 172
Target Start/End: Original strand, 51015343 - 51015497
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| || ||||||||||| ||||||||||||||||| | |||||||||    
T  51015343 tatcattcacttgggtggaattaacgaacgacgaaaacgtgacgaacatgttttgggagcacaacatgttccagtggatcgatatgcgggaaacgttgct 51015442  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  51015443 gagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattag 51015497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 18 - 172
Target Start/End: Original strand, 41577972 - 41578126
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||| |||||| ||||||||| |||||||||| ||||||||    
T  41577972 tatcattcacttgggtggaattaacgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagtggatcaatatgcgagtgacgttgct 41578071  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||| |||||||    
T  41578072 gagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattag 41578126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 46414487 - 46414333
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||  |||||||||||||||| || ||||||||    
T  46414487 tatcattcacttgggtggaattaacgaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttctagtggatcgatatgcgggtgacgttgct 46414388  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    |||||||||| || |||||||||||| ||||||||||||||||||||||||||||    
T  46414387 gagatcaacttaagatatcatcaaaagtttgattccgccagaagatcgtcattag 46414333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 51013431 - 51013277
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| ||||| ||||||||||| || ||||||||    
T  51013431 tatcattcacttgggtggaattaacgaacgacgaaaacgtgacgagcatgttttgggaacacaacatgttccagtgtatcgatatgcgggtgacgttgct 51013332  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
     |||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  51013331 aagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattag 51013277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 18 - 172
Target Start/End: Original strand, 37281518 - 37281672
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||||||||| || ||||||||||| ||||||||||||||||| || ||||||||    
T  37281518 tatcattcacttgggtggaattaaagaacgacgaaaacgtgacgagcatgttttgggagcacaacatgtttcagtggatcgatatgcgggtgacgttgct 37281617  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    ||||||||| ||| |||||||||||| ||| ||||||||||||||||||||||||    
T  37281618 gagatcaacggaagatatcatcaaaagtttaattccgccagaagatcgtcattag 37281672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 18 - 172
Target Start/End: Original strand, 41803968 - 41804122
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| ||||||||||||||| |||| |||||| |    
T  41803968 tatcattcacttgggtggaattaacgaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgagagtgacgttgat 41804067  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    |||||||| |||| |||| ||||||| ||||||||||||||||||||||||||||    
T  41804068 gagatcaaatgaagatataatcaaaagtttgattccgccagaagatcgtcattag 41804122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 17 - 172
Target Start/End: Original strand, 2428552 - 2428707
Alignment:
Q  17 atatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgc 116  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| || |||||||| ||  |||||||||||||||| || |||||||    
T  2428552 atatcattcacttgggtggaattaacgaacgacgaaaacgtgacgaacatgttttgggagcacaacattttctagtggatcgatatgcgggtgacgttgc 2428651  T
Q  117 tgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    |||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||    
T  2428652 tgagatcaactgaagatatcatcaaaagtttgattccgctagaagatcgtcattag 2428707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 34647420 - 34647266
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||| | || ||||||||||| |||||||| |||||||| || ||||||||    
T  34647420 tatcattcacttgggtggaattaacgaacgacgaaaacgtgacgagcatgtttcgggagcacaacatgttccagtggattgatatgcgggtgacgttgct 34647321  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    ||||||||||||| |||||||||||| ||||||| ||| ||||||||||||||||    
T  34647320 gagatcaactgaagatatcatcaaaagtttgattacgctagaagatcgtcattag 34647266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 45100618 - 45100464
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||| |||| ||||||| |||||||||||||||||||||| || ||||||||||| ||||||||||||||||| || ||||||||    
T  45100618 tatcattcacttgggtggagttaaagaacgacaaaaatgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtgacgttgct 45100519  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    ||||||||||||| |||||||||||| ||||||||||||| || |||||||||||    
T  45100518 gagatcaactgaagatatcatcaaaagtttgattccgccataatatcgtcattag 45100464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 17 - 172
Target Start/End: Original strand, 7246159 - 7246314
Alignment:
Q  17 atatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgc 116  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||  | |||||||| ||||| ||||||||||| || |||||||    
T  7246159 atatcattgacttgggtggaattaacgaacgacgaaaacgtgacgagcatgttttgggattataacatgttccagtgtatcgatatgcgggtgacgttgc 7246258  T
Q  117 tgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    | |||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  7246259 ttagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattag 7246314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 18 - 172
Target Start/End: Original strand, 30192604 - 30192758
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||||||||||||||||||||| ||| | ||||||||||| ||  ||| ||||||  |||||||||||||||| || ||||||||    
T  30192604 tatcattcacttgggtggaattaacgaacgacgaaaacgtgtctagcatgttttgggagtacatcatgttctagtggatcgatatgcgggtgacgttgct 30192703  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  30192704 gagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattag 30192758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 18 - 167
Target Start/End: Original strand, 43569976 - 43570125
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||| |||||||||||| |||||||||||||||| ||||||||||||||||| || |||| |||||| ||||||||||||||||| |||||||||||    
T  43569976 tatcatttacttgggtggaactaacgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagtggatcgatatgcgggtaacgttgct 43570075  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtc 167  Q
    |||||||| |||| |||||||||||| ||||||| |||||||||||||||    
T  43570076 gagatcaattgaagatatcatcaaaagtttgatttcgccagaagatcgtc 43570125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 18 - 172
Target Start/End: Original strand, 7954270 - 7954424
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||| | ||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||| |||| ||||||    
T  7954270 tatcatttagttgggtggaattaacaaacgacgaaaatgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtaaagttgct 7954369  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
     |||||||||||| |||| ||||| ||| ||||||||| ||||||||||||||||    
T  7954370 aagatcaactgaagatattatcaacaatctgattccgctagaagatcgtcattag 7954424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 18 - 172
Target Start/End: Original strand, 14631511 - 14631665
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| || || |||||||| |||||||| |||||||| || |||||| |    
T  14631511 tatcattcacttgggtggaattaacgaacaacgaaaacgtgacgagcatgttttgggagcaaaacatgttccagtggattgatatgcgggtgacgttgtt 14631610  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    |||||||||| || |||||||||||| |||||||| |||||||||||||||||||    
T  14631611 gagatcaactaaagatatcatcaaaagtttgattctgccagaagatcgtcattag 14631665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 42323542 - 42323388
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || | ||| ||||| ||||||||||||||||  || ||||||||    
T  42323542 tatcattcacttgggtggaattaacgaacgacgaaaacgtgacgagcatgttttgggagctcaaaatgtttcagtggatcgatatgctggtgacgttgct 42323443  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    ||||||||||||| |||||||||||| ||||||||| |  |||||||||||||||    
T  42323442 gagatcaactgaagatatcatcaaaagtttgattccactggaagatcgtcattag 42323388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 52569561 - 52569408
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| | ||| ||||||||||| || || |||||    
T  52569561 tatcattcgcttgggtggaattaacgaacgacgaaaa-gtgacgagcatgttttgggagcacaacatgttccggtgaatcgatatgcgggtgacattgct 52569463  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    ||||||||||||| |||||||||| | ||||||||||||||||||||||||||||    
T  52569462 gagatcaactgaagatatcatcaagagtttgattccgccagaagatcgtcattag 52569408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 10053424 - 10053274
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||| ||||||||||||||||||||||||||| |||| |||||||||||| || |   ||||||| ||||||||||||||||| || ||||||||    
T  10053424 tatcattcaattgggtggaattaacgaacgacgaaaacgtgatgagcatgttttgggagc---acatgttccagtggatcgatatgcgggtgacgttgct 10053328  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  10053327 gagatcaactg-aaatatcatcaaaagtttgattccgccagaagatcgtcattag 10053274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 47760044 - 47759890
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    |||||||||| |||||||||||||||||||||||||| ||||| | ||||||||| || |||| |||||| |||||||||||| | || || ||||||||    
T  47760044 tatcattcacctgggtggaattaacgaacgacgaaaacgtgacaaacatgttttgggaacacagcatgttccagtggatcgatgtacgggtgacgttgct 47759945  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    |||||||||| || |||||||||||| ||||||||||||||||||||||||||||    
T  47759944 gagatcaactaaagatatcatcaaaagtttgattccgccagaagatcgtcattag 47759890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 18 - 172
Target Start/End: Original strand, 49273465 - 49273619
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||||||| || || ||||||||||| |||| |||| ||||| | || ||||||||    
T  49273465 tatcattcacttgggtggaattaatgaacgacgaaaacgtgacgagcatgttctgggagcacaacatgttccagttgatcaatatgtgggtgacgttgct 49273564  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    ||||||||||||| |||||||||||| ||||||||  |||||| |||||||||||    
T  49273565 gagatcaactgaatatatcatcaaaagtttgattcttccagaatatcgtcattag 49273619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 17 - 214
Target Start/End: Complemental strand, 774492 - 774296
Alignment:
Q  17 atatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgc 116  Q
    |||||||||| |||| |||||||||||||||| ||||| |||| || ||||||||  || |||  |||||| ||||||||||||||||| ||||||||||    
T  774492 atatcattcagttggatggaattaacgaacgatgaaaacgtgaagaacatgttttcggagcactgcatgttccagtggatcgatatgcgggtaacgttgc 774393  T
Q  117 tgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    |||||||||||||| |||||||||| | | ||||||| |||||||||||| ||||| ||||| || |  | |||||||| ||||||||||||||||||    
T  774392 tgagatcaactgaagatatcatcaagagtctgattccaccagaagatcgtgattaggtaggg-aatgcaccttccaactgcaacaattgtcttacctc 774296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 18 - 170
Target Start/End: Complemental strand, 36721542 - 36721390
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    |||||||||||||  |||||| ||||||||||||||| ||||||||||   |||| || |||||||||||  |||||||||||||||  || ||||||||    
T  36721542 tatcattcacttgattggaataaacgaacgacgaaaacgtgacgagcaatgtttgggagcacaacatgttctagtggatcgatatgctggtgacgttgct 36721443  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcatt 170  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  36721442 gagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcatt 36721390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 17 - 211
Target Start/End: Complemental strand, 6464499 - 6464305
Alignment:
Q  17 atatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgc 116  Q
    |||||||||| |||||||||||||| |||||||||||| ||||| | ||||||||| || ||||||||||| ||||||||||||||| | ||||||||||    
T  6464499 atatcattcagttgggtggaattaatgaacgacgaaaacgtgacaatcatgttttgggagcacaacatgttccagtggatcgatatgtgggtaacgttgc 6464400  T
Q  117 tgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttac 211  Q
    |||||||||||||| |||| ||||| | | |||||| || |||||||||| ||||  ||||| || |  | ||||||||||||||| | ||||||    
T  6464399 tgagatcaactgaagatattatcaacagtctgattctgcaagaagatcgtgattatatagggaaatgcaccttccaactacaacaactctcttac 6464305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 17 - 211
Target Start/End: Original strand, 6754269 - 6754463
Alignment:
Q  17 atatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgc 116  Q
    |||||||| | ||||||||||||||||||||||||||| ||||||| ||||||||| ||  ||||||||||  ||| |||||||||||| ||||||||||    
T  6754269 atatcattaagttgggtggaattaacgaacgacgaaaacgtgacgatcatgttttgggagtacaacatgttctagttgatcgatatgcgggtaacgttgc 6754368  T
Q  117 tgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttac 211  Q
    |||||||||||||| |||| ||||| | | |||||| || |||||||||| ||||  ||||| || |  | ||||||||||||||| ||||||||    
T  6754369 tgagatcaactgaagatattatcaacagtctgattctgctagaagatcgtgattatgtagggaaatgcaccttccaactacaacaactgtcttac 6754463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 17 - 178
Target Start/End: Original strand, 27187013 - 27187174
Alignment:
Q  17 atatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgc 116  Q
    |||||||| | |||||||||||||||||||||||||||  |||||| ||||||||| || ||||||||||| || |||||||||||||| ||||||||||    
T  27187013 atatcatttagttgggtggaattaacgaacgacgaaaacatgacgaacatgttttgggagcacaacatgttccattggatcgatatgcgggtaacgttgc 27187112  T
Q  117 tgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttaggg 178  Q
    ||||||||||| || |||| ||||| ||| ||||||||||| || ||||| ||||| |||||    
T  27187113 tgagatcaactaaagatattatcaacaatctgattccgccataatatcgtgattaggtaggg 27187174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 50458834 - 50458690
Alignment:
Q  28 ttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgctgagatcaact 127  Q
    |||||||||||  ||||||||||||||  |||||||||||||||| || ||||||||||| |||||||| |||||||| || |||||| |||||| ||||    
T  50458834 ttgggtggaatctacgaacgacgaaaacttgacgagcatgttttgggagcacaacatgttccagtggatagatatgcgggtgacgttgttgagataaact 50458735  T
Q  128 gaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    ||| |||||||||||| |||||||||||| |||||||||||||||    
T  50458734 gaagatatcatcaaaagtttgattccgcctgaagatcgtcattag 50458690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 51 - 171
Target Start/End: Complemental strand, 46346732 - 46346612
Alignment:
Q  51 aaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgctgagatcaactgaaaatatcatcaaaaatttgat 150  Q
    |||| |||||||||||||| || || ||||||||||| ||||||||||||||||| || ||||||||||||||||||||| |||||||||||| ||||||    
T  46346732 aaaacgtgacgagcatgttctgggagcacaacatgttccagtggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaaaagtttgat 46346633  T
Q  151 tccgccagaagatcgtcatta 171  Q
    ||||||||||||| |||||||    
T  46346632 tccgccagaagattgtcatta 46346612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 8633512 - 8633358
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||  || ||||| ||  ||||| |||| ||||||||||||||||| ||||||||| |    
T  8633512 tatcattcagttgggtggaattaacgaacgacgaaaacgtgacgaatattttttgggatgacaacgtgttccagtggatcgatatgcgggtaacgttgtt 8633413  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    | ||||| ||||| |||| ||||| | | ||||||||||||||||||||||||||    
T  8633412 gcgatcatctgaagatattatcaacagtctgattccgccagaagatcgtcattag 8633358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 18 - 206
Target Start/End: Complemental strand, 33449292 - 33449117
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||||||||||||||||||||| |||| || ||||||||| || |||| |||||| |||||||||||||            ||||    
T  33449292 tatcattcacttgggtggaattaacgaacgacgaaaacgtgaagaacatgttttgggagcacatcatgttccagtggatcgata------------tgct 33449205  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgt 206  Q
    ||||||||||||| |||||||| ||| |||||||||||||||||||||| ||||| ||||| || |  | |||||||||||||||||||    
T  33449204 gagatcaactgaagatatcatccaaagtttgattccgccagaagatcgtaattaggtaggg-aatgcaccttccaactacaacaattgt 33449117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 17 - 211
Target Start/End: Complemental strand, 20376036 - 20375843
Alignment:
Q  17 atatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgc 116  Q
    |||||||||| |||||||||||||| ||||||||| || |||| ||| ||||||||||| |||||||||||  ||| |||||||||||| ||||||||||    
T  20376036 atatcattcagttgggtggaattaaagaacgacgataacgtgaggagtatgttttgagagcacaacatgttcaagtagatcgatatgcgtgtaacgttgc 20375937  T
Q  117 tgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttac 211  Q
    ||||||||| | || |||  | |||   ||||||||||||| || ||||| ||||| ||||| || |  | |||||||||||| |||||||||||    
T  20375936 tgagatcaatttaagataataacaactgtttgattccgccaaaatatcgtgattaggtaggg-aatgcaccttccaactacaaaaattgtcttac 20375843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 80 - 211
Target Start/End: Original strand, 18440873 - 18441003
Alignment:
Q  80 aacatgttacagtggatcgatatgcgagtaacgttgctgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggt 179  Q
    |||||||| ||||||||||||||| | |||||||||||||||||||||||| |||| ||||| | ||||||||| |||||||||||| ||||| ||| |     
T  18440873 aacatgttccagtggatcgatatgtgtgtaacgttgctgagatcaactgaagatattatcaacagtttgattccaccagaagatcgtgattaggtagag- 18440971  T
Q  180 aaggtgcattccaactacaacaattgtcttac 211  Q
    || |  | ||||||||||||||||||||||||    
T  18440972 aatgcaccttccaactacaacaattgtcttac 18441003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 80 - 211
Target Start/End: Original strand, 19485947 - 19486077
Alignment:
Q  80 aacatgttacagtggatcgatatgcgagtaacgttgctgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggt 179  Q
    |||||||| ||||||||||||||| | |||||||||||||||||||||||| |||| ||||| | ||||||||| |||||||||||| ||||| ||| |     
T  19485947 aacatgttccagtggatcgatatgtgtgtaacgttgctgagatcaactgaagatattatcaacagtttgattccaccagaagatcgtgattaggtagag- 19486045  T
Q  180 aaggtgcattccaactacaacaattgtcttac 211  Q
    || |  | ||||||||||||||||||||||||    
T  19486046 aatgcaccttccaactacaacaattgtcttac 19486077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 214
Target Start/End: Original strand, 14265473 - 14265666
Alignment:
Q  17 atatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgc 116  Q
    |||||||||| |||| || |||||| |||||||||    ||||||| ||||||||| |||||||||||||||| |||||||||| || | |||||||| |    
T  14265473 atatcattcagttggatgaaattaaggaacgacgac---gtgacgaacatgttttgggaccacaacatgttaccgtggatcgatttgtgtgtaacgttac 14265569  T
Q  117 tgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    |||||| |||| || ||||  || | | |||||||||||| ||||||||| ||||| ||||| |  |  | ||||||||||| |||||||||||||||    
T  14265570 tgagattaactaaagatattctccagagtttgattccgcctgaagatcgtgattaggtaggg-attgcactttccaactacatcaattgtcttacctc 14265666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 17 - 213
Target Start/End: Complemental strand, 25887764 - 25887567
Alignment:
Q  17 atatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgc 116  Q
    |||||| ||| ||||||||||||||| ||||||||  |||||| || ||||||||| || |||||||||||   ||||||| ||||| | | |||||||     
T  25887764 atatcactcagttgggtggaattaacaaacgacgaggatgtgaggaccatgttttgggagcacaacatgttctcgtggatc-atatgtgtggaacgttgt 25887666  T
Q  117 tgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaagg--tgca--ttccaactacaacaattgtcttacc 212  Q
    |||||||||||||| ||||  || | | ||||||||||| |||| ||||| |||| ||| |||| ||  ||||  |||||||||||||||||||||||||    
T  25887665 tgagatcaactgaagatattctccacagtttgattccgctagaatatcgtgatta-tta-ggtagggaatgcaccttccaactacaacaattgtcttacc 25887568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 213
Target Start/End: Original strand, 13895527 - 13895557
Alignment:
Q  183 gtgcattccaactacaacaattgtcttacct 213  Q
    |||||||||||||||||||||||||||||||    
T  13895527 gtgcattccaactacaacaattgtcttacct 13895557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 213
Target Start/End: Original strand, 24701929 - 24701959
Alignment:
Q  183 gtgcattccaactacaacaattgtcttacct 213  Q
    |||||||||||||||||||||||||||||||    
T  24701929 gtgcattccaactacaacaattgtcttacct 24701959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 213
Target Start/End: Original strand, 25576248 - 25576278
Alignment:
Q  183 gtgcattccaactacaacaattgtcttacct 213  Q
    |||||||||||||||||||||||||||||||    
T  25576248 gtgcattccaactacaacaattgtcttacct 25576278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 213
Target Start/End: Original strand, 44835144 - 44835174
Alignment:
Q  183 gtgcattccaactacaacaattgtcttacct 213  Q
    |||||||||||||||||||||||||||||||    
T  44835144 gtgcattccaactacaacaattgtcttacct 44835174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 213
Target Start/End: Complemental strand, 44928025 - 44927995
Alignment:
Q  183 gtgcattccaactacaacaattgtcttacct 213  Q
    |||||||||||||||||||||||||||||||    
T  44928025 gtgcattccaactacaacaattgtcttacct 44927995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 213
Target Start/End: Complemental strand, 47066248 - 47066218
Alignment:
Q  183 gtgcattccaactacaacaattgtcttacct 213  Q
    |||||||||||||||||||||||||||||||    
T  47066248 gtgcattccaactacaacaattgtcttacct 47066218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 224
Target Start/End: Complemental strand, 27187870 - 27187834
Alignment:
Q  188 ttccaactacaacaattgtcttacctcggaataaggt 224  Q
    ||||||||||||||||||||||||||| |||| ||||    
T  27187870 ttccaactacaacaattgtcttacctctgaatgaggt 27187834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 156; Significance: 5e-83; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 18 - 209
Target Start/End: Original strand, 41363718 - 41363909
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||| || ||||||||    
T  41363718 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggttacgttgct 41363817  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 209  Q
    ||||||||||||| |||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41363818 gagatcaactgaagatatcatcaacaacttgattcctccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 41363909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 18 - 214
Target Start/End: Complemental strand, 33799703 - 33799507
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||| |||| |||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||  ||||||||||    
T  33799703 tatcattcacttgggtggagttaaagaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcggataacgttgct 33799604  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    ||||||||||||| |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33799603 gagatcaactgaagatatcatcaacaacttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 33799507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 18 - 214
Target Start/End: Complemental strand, 38034077 - 38033881
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||  |||||||||||||||| |||||||||||    
T  38034077 tatcattcacctgggtggaattaacgaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttctagtggatcgatatgcgggtaacgttgct 38033978  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    ||||||||||||| |||||||||| |  ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38033977 gagatcaactgaagatatcatcaatagcttgattccgccggaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 38033881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 18 - 209
Target Start/End: Complemental strand, 15032476 - 15032285
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| ||||||||||||||||| || | ||||||    
T  15032476 tatcattcacttgggtggaattaacgaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtgaagttgct 15032377  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 209  Q
     |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  15032376 tagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacatttgtctt 15032285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 17 - 214
Target Start/End: Original strand, 43693198 - 43693395
Alignment:
Q  17 atatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgc 116  Q
    |||||||||| |||||||||||||| |||||||||||| ||||||||||||||||| || ||||||||||| ||||||||||||||||| || |||||||    
T  43693198 atatcattcatttgggtggaattaaagaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtgacgttgc 43693297  T
Q  117 tgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    |||||||||||||| |||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  43693298 tgagatcaactgaagatatcatcaacaacttgattcctccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattttcttacctc 43693395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 18 - 214
Target Start/End: Complemental strand, 43638829 - 43638633
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    |||| |||||||||||||| |||| |||||||||||||||||||||||||||||| || ||||||||||| ||||| ||||||||||| |||||||||||    
T  43638829 tatccttcacttgggtggagttaaagaacgacgaaaatgtgacgagcatgttttgggagcacaacatgttccagtgcatcgatatgcgcgtaacgttgct 43638730  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    ||||||||||||| |||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  43638729 gagatcaactgaagatatcatcaacaacttgatttcgccagaagatcgtcattagttagggtaaggtgcattccaactacaataattgtcttacctc 43638633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 20 - 211
Target Start/End: Original strand, 41275458 - 41275649
Alignment:
Q  20 tcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgctga 119  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||| || |||||||||||||| || ||||||||||    
T  41275458 tcattcacttgggtggaattaacaaacgacgaaaacgtgacgagcatgttttgagagcacaacatgttccaatggatcgatatgcgggtgacgttgctga 41275557  T
Q  120 gatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttac 211  Q
    ||||||||||| |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  41275558 gatcaactgaagatatcatcaacaacttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactgcaataattgtcttac 41275649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 18 - 213
Target Start/End: Complemental strand, 42169112 - 42168917
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    |||||||| |||||||||||||||||||| ||||||| ||||||||||||||||| || ||||||||||| ||||||||||||||||| ||||||||||     
T  42169112 tatcattcccttgggtggaattaacgaacaacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtaacgttgca 42169013  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacct 213  Q
    ||||||||||||| |||||||||| |  |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  42169012 gagatcaactgaagatatcatcaacagcttgattccgccagaagatcgtcattagttaggataagatgcattccaactacaacaattgtcttacct 42168917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 20 - 213
Target Start/End: Original strand, 26452389 - 26452582
Alignment:
Q  20 tcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgctga 119  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||| || ||||||||||| ||||||||||||||||| || ||||||||||    
T  26452389 tcattcacttgggtggaattaacaaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtgacgttgctga 26452488  T
Q  120 gatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacct 213  Q
    ||||||||||| |||||||||| || |||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||    
T  26452489 gatcaactgaagatatcatcaacaacttgattccgctagaagatcgtcattagttagggtaaggtgtattccaactgcaacaattgtcatacct 26452582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 18 - 214
Target Start/End: Original strand, 34615015 - 34615211
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||| || ||||||||| | |||||||| |||||||| |||||||||||    
T  34615015 tatcattcacttgggtgaaattaacgaacgacgaaaacgtgacgaacatgttttgggagcacaacatgatccagtggattgatatgcgggtaacgttgct 34615114  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    ||||||||||||| |||||||||| || |||||||| ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  34615115 gagatcaactgaagatatcatcaacaacttgattccaccagaagatagtaattagttagggtaaggtgcattccaactacaacaattgtcttacctc 34615211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 20 - 213
Target Start/End: Original strand, 2416979 - 2417172
Alignment:
Q  20 tcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgctga 119  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| |||| |||||||||||  || |||||| |||    
T  2416979 tcattcacttgggtggaattaacgaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagttgatcgatatgcaggtgacgttgatga 2417078  T
Q  120 gatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacct 213  Q
    ||||||| ||| |||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  2417079 gatcaaccgaagatatcatcaacaacttgattccaccagaagatcgtcattagttagggtaaggtgcattccaacttcaacaattgtcttacct 2417172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 18 - 213
Target Start/End: Original strand, 24861405 - 24861600
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||||||  | ||||| |||||||| || | ||||||    
T  24861405 tatcattcacttgggtggaattaacaaacgacgaaaatgtgacgagcatgttttgggagcacaacatgttcaattggattgatatgcgggtgatgttgct 24861504  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacct 213  Q
    ||||||||||||| |||||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  24861505 gagatcaactgaagatatcatcaacaacttgattctgccagaagatcgtcattagttagggtaaggtgcattccatctgcaacaattgtcttacct 24861600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 17 - 211
Target Start/End: Complemental strand, 28706295 - 28706101
Alignment:
Q  17 atatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgc 116  Q
    |||||||||||||| ||||| |||| |||| ||||||| ||||||||||||||||| || |||||||||||  |||||||||||||||| |||||||||     
T  28706295 atatcattcacttgagtggagttaaagaacaacgaaaacgtgacgagcatgttttgggagcacaacatgttttagtggatcgatatgcgtgtaacgttgt 28706196  T
Q  117 tgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttac 211  Q
    |||||||||||||| ||||||||||    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  28706195 tgagatcaactgaagatatcatcaaccgcttgattccgccagaagattgtcattagttagggtaaggtgcattccaactacaacaattgtcttac 28706101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 18 - 214
Target Start/End: Original strand, 40414672 - 40414866
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||||||||| || ||||||||||| |||| ||| |||||||| || ||||||||    
T  40414672 tatcattcacttgggtggaattaaagaacgacgaaaacgtgacgagcatgttttgggagcacaacatgtttcagttgattgatatgcgggtgacgttgct 40414771  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    ||||||||||||| |||||||||| |  |||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||    
T  40414772 gagatcaactgaagatatcatcaacagcttgattccaccagaagatcgtcattag--agggtaaggtgcattccaactacaacaattctcttacctc 40414866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 18 - 206
Target Start/End: Complemental strand, 485410 - 485222
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||| || |||| ||||||  ||||||||||||||||  | | ||||||    
T  485410 tatcattcagttgggtggaattaacgaacgacgaaaacgtgacgaccatgttttgggagcacagcatgttctagtggatcgatatgcggatgaagttgct 485311  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgt 206  Q
     |||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  485310 tagatcaactgaagatatcatcaaaagtttgattccgccacaagatcgtcattagttagggtaaggtgcattccaactacaacaattgt 485222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 18 - 213
Target Start/End: Original strand, 40415319 - 40415514
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||||||||| || ||||||||||| | ||||||||||||||  || |||||| |    
T  40415319 tatcattcacttgggtggaattaaagaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttcccgtggatcgatatgcaggtgacgttgtt 40415418  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacct 213  Q
    |||||||||| || |||||||||| |  ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  40415419 gagatcaacttaagatatcatcaacagcttgattccgtcagaagatcgtcattagttagggtaaggtgcatttcaactacaacaattctcttacct 40415514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 41857126 - 41856972
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||| ||||||||||||||||| || ||||||||    
T  41857126 tatcattaacttgggtggaattaacgaacgacgaaaatgtgacgagcatattttgggagcacaacatgttccagtggatcgatatgcgggtgacgttgct 41857027  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  41857026 gagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattag 41856972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 44943233 - 44943079
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| ||||||||||||||||| || ||||||||    
T  44943233 tatcattcacttgggtggaattaacgaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtgacgttgct 44943134  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||    
T  44943133 gagatcaactgaagatatcatcaaaagtttgattccgccagaagattgtcattag 44943079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 18 - 172
Target Start/End: Original strand, 42603516 - 42603670
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||| |||||| ||||||||||||||||| || ||||||||    
T  42603516 tatcattcacttgggtggaattaacgaacgacgaaaacgtgacgagcatgttttgggagcacatcatgttccagtggatcgatatgcgggtgacgttgct 42603615  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    || |||||| ||| |||||||||||| ||||||||||||| ||||||||||||||    
T  42603616 gaaatcaaccgaatatatcatcaaaagtttgattccgccaaaagatcgtcattag 42603670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 17 - 165
Target Start/End: Original strand, 40702421 - 40702569
Alignment:
Q  17 atatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgc 116  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || |||||||| |||||||||||||||||  | |||||||    
T  40702421 atatcattcacttgggtggaattaacgaacgacgaaaacgtgacgagcatgttttgggaacaaaacatgttccagtggatcgatatgcggatgacgttgc 40702520  T
Q  117 tgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcg 165  Q
    |||||||||||||| |||||||||||| ||||||||||||| |||||||    
T  40702521 tgagatcaactgaatatatcatcaaaagtttgattccgccaaaagatcg 40702569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 18440447 - 18440293
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    |||||||||||||||| |||||||||||||| ||||| ||||||||||||||||  || ||||||||||| ||||||||||||||| | || ||||||||    
T  18440447 tatcattcacttgggtagaattaacgaacgatgaaaacgtgacgagcatgttttaggagcacaacatgttccagtggatcgatatgagggtgacgttgct 18440348  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    ||||| ||||||| |||||||||||| ||||||| ||| ||||||||||||||||    
T  18440347 gagataaactgaagatatcatcaaaagtttgattacgcgagaagatcgtcattag 18440293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 19242314 - 19242160
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||| |||||| ||||||| |||| ||||||||||||||||| ||  |||||||||| ||||||||||||||||| || ||||||||    
T  19242314 tatcattcacttgggtgtaattaaggaacgacaaaaacgtgacgagcatgttttgggaatacaacatgttccagtggatcgatatgcgggtgacgttgct 19242215  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
     |||||||||||| |||||||||||| ||||||||  | ||||||| ||||||||    
T  19242214 aagatcaactgaagatatcatcaaaagtttgattctacgagaagattgtcattag 19242160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 19315498 - 19315344
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||| |||||| ||||||| |||| ||||||||||||||||| ||  |||||||||| ||||||||||||||||| || ||||||||    
T  19315498 tatcattcacttgggtgtaattaaggaacgacaaaaacgtgacgagcatgttttgggaatacaacatgttccagtggatcgatatgcgggtgacgttgct 19315399  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
     |||||||||||| |||||||||||| ||||||||  | ||||||| ||||||||    
T  19315398 aagatcaactgaagatatcatcaaaagtttgattctacgagaagattgtcattag 19315344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 17 - 214
Target Start/End: Complemental strand, 3589419 - 3589223
Alignment:
Q  17 atatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgc 116  Q
    |||||||||| |||||||||||||| ||||||||| || |||| | |||||||||| || ||||  ||||| ||||||||||||||||| ||||| |||     
T  3589419 atatcattcagttgggtggaattaatgaacgacgataacgtgatgggcatgttttgggagcacaggatgttccagtggatcgatatgcgtgtaacattgt 3589320  T
Q  117 tgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    |||||||||||||| | || ||||| | |||||||||||||||||||||| ||||| ||||| || |  | ||| |||||||||||||||||||||||    
T  3589319 tgagatcaactgaagacattatcaacagtttgattccgccagaagatcgtgattaggtaggg-aatgcaccttcaaactacaacaattgtcttacctc 3589223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 18 - 135
Target Start/End: Original strand, 26484639 - 26484756
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||| |||||| |||||||||||||||||  |||| |||||    
T  26484639 tatcattcacttgggtggaattaacgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagtggatcgatatgcgcataacattgct 26484738  T
Q  118 gagatcaactgaaaatat 135  Q
    ||||||||||||| ||||    
T  26484739 gagatcaactgaagatat 26484756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 17 - 214
Target Start/End: Complemental strand, 31171969 - 31171773
Alignment:
Q  17 atatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagac-cacaacatgttacagtggatcgatatgcgagtaacgttg 115  Q
    |||||||||| |||||||||||||| |||||||||  |  |||| | ||| |||| |||  |||| |||||||| ||||||||||||| | || ||||||    
T  31171969 atatcattcagttgggtggaattaatgaacgacgacgacatgacaaacat-ttttcagaagcacagcatgttaccgtggatcgatatgtgggtgacgttg 31171871  T
Q  116 ctgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    |||||||||||||||||||| ||||| | |||||||||||||||||||||| ||||| || || || |  | |||||||||||||||||||||||||||    
T  31171870 ctgagatcaactgaaaatattatcaacagtttgattccgccagaagatcgtgattaggtatgg-aatgcaccttccaactacaacaattgtcttacctc 31171773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 110 - 213
Target Start/End: Original strand, 22549236 - 22549336
Alignment:
Q  110 acgttgctgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 209  Q
    |||||||||| |||||||||| ||||||||||    |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  22549236 acgttgctgacatcaactgaagatatcatcaac---ttgattccgccagaagatcgtcattagttagggtaaggtgtattccaacttcaacaattgtctt 22549332  T
Q  210 acct 213  Q
    ||||    
T  22549333 acct 22549336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 20 - 115
Target Start/End: Original strand, 16575756 - 16575851
Alignment:
Q  20 tcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttg 115  Q
    ||||||| ||||||||||||||||||| ||||||| | || |||||||||||| |||||||||||||| ||||| ||||||| ||| |||| ||||    
T  16575756 tcattcagttgggtggaattaacgaacaacgaaaacgggatgagcatgttttgggaccacaacatgttccagtgcatcgatacgcgcgtaatgttg 16575851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 22548327 - 22548379
Alignment:
Q  20 tcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttg 72  Q
    ||||||||||||||||||||||| || |||||||| |||||||||||||||||    
T  22548327 tcattcacttgggtggaattaacaaatgacgaaaacgtgacgagcatgttttg 22548379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 213
Target Start/End: Complemental strand, 24861900 - 24861870
Alignment:
Q  183 gtgcattccaactacaacaattgtcttacct 213  Q
    |||||||||||||||||||||||||||||||    
T  24861900 gtgcattccaactacaacaattgtcttacct 24861870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 213
Target Start/End: Original strand, 38033581 - 38033611
Alignment:
Q  183 gtgcattccaactacaacaattgtcttacct 213  Q
    |||||||||||||||||||||||||||||||    
T  38033581 gtgcattccaactacaacaattgtcttacct 38033611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 213
Target Start/End: Complemental strand, 40415815 - 40415785
Alignment:
Q  183 gtgcattccaactacaacaattgtcttacct 213  Q
    |||||||||||||||||||||||||||||||    
T  40415815 gtgcattccaactacaacaattgtcttacct 40415785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 16575869 - 16575933
Alignment:
Q  145 tttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 209  Q
    ||||||||||||||||| |||| |||||  |||| || |  | ||||||||||||||||||||||    
T  16575869 tttgattccgccagaagttcgtgattaggcagggaaatgcaccttccaactacaacaattgtctt 16575933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 151; Significance: 5e-80; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 20 - 214
Target Start/End: Original strand, 19400416 - 19400610
Alignment:
Q  20 tcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgctga 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| |||||| ||||||||||||||||| || |||||| |||    
T  19400416 tcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgggagcacagcatgttccagtggatcgatatgcgggtgacgttggtga 19400515  T
Q  120 gatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    ||||||||||| |||||||||| || ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19400516 gatcaactgaagatatcatcaacaacttgattccgccagaatatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 19400610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 18 - 214
Target Start/End: Original strand, 3601392 - 3601588
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||| |||||  |||||||||| || ||||||||    
T  3601392 tatcattcacttgggtggaattaacgaacgacgaaaacgtgacgagcatgttttaagagcacaacatgttccagtgtttcgatatgcgggtgacgttgct 3601491  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    ||||||||||||| |||||||||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  3601492 gagatcaactgaagatatcatcaaaagtttgattccgtcagaagatcgtcattagttagagtaaggtgcattccaactacaacaattgtcttacctc 3601588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 18 - 209
Target Start/End: Complemental strand, 7385 - 7194
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||| |||||| ||||||||||||||||| || | ||||||    
T  7385 tatcattcacttgggtggaattaacgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagtggatcgatatgcgggtgaagttgct 7286  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 209  Q
     |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7285 tagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 7194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 18 - 209
Target Start/End: Original strand, 8538005 - 8538196
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||||| || ||||||||||| ||||||||||||||||| || | ||||||    
T  8538005 tatcattcacttgggtggaattaacgaacgacgaaaacatgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtgaagttgct 8538104  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 209  Q
     |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8538105 tagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 8538196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 18 - 209
Target Start/End: Original strand, 11346760 - 11346951
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||| |||||| |||||||||||| ||||||||||||||||| || |||| |||||| |||||||||||||||||||| | ||||||    
T  11346760 tatcattcacttgggtgaaattaatgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagtggatcgatatgcgagtgaagttgct 11346859  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 209  Q
     |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11346860 tagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 11346951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 18 - 211
Target Start/End: Complemental strand, 541791 - 541598
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||||||||| || |||| |||||| ||||||||||||||||| || ||||||||    
T  541791 tatcattcacttgggtggaattaacgaacgacgaaaacgggacgagcatgttttgggagcacatcatgttccagtggatcgatatgcgggtgacgttgct 541692  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttac 211  Q
    ||||||||||| | |||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  541691 gagatcaactggagatatcatcaacaacttgatttcgccagaagatcgtcattagttagggtaaggtgcattccaactgcaacaattgtcttac 541598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 18 - 214
Target Start/End: Original strand, 1971416 - 1971612
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| ||||||||| ||||||| |||||||||||    
T  1971416 tatcattcacttcggtggaattaacgaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcaatatgcgggtaacgttgct 1971515  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    ||||||||||||| |||||||||| |  ||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  1971516 gagatcaactgaagatatcatcaacagcttgattccgccagaaaatcatcattagttatggtaaggtgcattccaactacaacaattgtcttgcctc 1971612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 18 - 209
Target Start/End: Complemental strand, 8576297 - 8576106
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||| || ||||||||||| | ||||||||||||||| || | ||||||    
T  8576297 tatcattcacttgggtggaattaacgaacgaagaaaacgtgacgaccatgttttgggagcacaacatgttccggtggatcgatatgcgggtgaagttgct 8576198  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 209  Q
     |||||||||||| |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  8576197 tagatcaactgaagatatcatcaaaagtttgattccgccagaagattgtcattagttagggtaaggtgcattccaactacaacaattgtctt 8576106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 18 - 209
Target Start/End: Complemental strand, 27661533 - 27661342
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||| || ||||||||||| ||||||||||||||||| || | ||||||    
T  27661533 tatcatttacttgggtggaattaacgaacgacgaaaacgtgacgaccatgttttgggagcacaacatgttccagtggatcgatatgcgggtgaagttgct 27661434  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 209  Q
     ||||||||| || |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  27661433 tagatcaactaaagatatcatcaaaagtttgattccgccagaagattgtcattagttagggtaaggtgcattccaactacaacaattgtctt 27661342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 18 - 209
Target Start/End: Original strand, 28881042 - 28881233
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||| || |||| |||||| ||||||||||||||||| || | ||||||    
T  28881042 tatcattcagttgggtggaattaacgaacgacgaaaacgtgacgaccatgttttgggagcacagcatgttccagtggatcgatatgcgggtgaagttgct 28881141  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 209  Q
     |||||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28881142 tagatcaactgaagatatcatcaaaagtttgattccgccacaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 28881233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 18 - 206
Target Start/End: Complemental strand, 19036830 - 19036642
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||| || ||||||||||| ||||||||||||||||| || | ||||||    
T  19036830 tatcattcagttgggtggaattaacgaacgacgaaaacgtgacgaccatgttttgggagcacaacatgttccagtggatcgatatgcgggtgaagttgct 19036731  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgt 206  Q
     |||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  19036730 tagatcaactgaagatatcatcaaaagtttgattccgccacaagatcgtcattagttagggtaaggtgcattccaactacaacatttgt 19036642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 18 - 209
Target Start/End: Original strand, 30709649 - 30709840
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    |||||||||||||||||||||||||||| |||||||| ||||||| ||||||||| || |||| |||||| ||||||||||||||||| || | |||| |    
T  30709649 tatcattcacttgggtggaattaacgaatgacgaaaacgtgacgaccatgttttgggagcacagcatgttccagtggatcgatatgcgggtgaagttggt 30709748  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 209  Q
     |||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30709749 tagatcaactgaagatatcatcaaaagtttgattccgccggaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 30709840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 11027828 - 11028022
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||||||||||||||||||||| || |||| ||||||||| || |||| |||||| ||||||||||||||||| || | |||| |    
T  11027828 tatcattcacttgggtggaattaacgaacgacgaaaacgtcacgaccatgttttgggagcacagcatgttccagtggatcgatatgcgggtgaagttggt 11027927  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacc 212  Q
     |||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  11027928 tagatcaactgaagatatcatcgaaagtttgattccgccagaagatcgtcattagttagggtaaggtgcattccaaccacaacaattgtcttacc 11028022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 4724230 - 4724076
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||||||||||| || ||||||||||| ||||||||||||||||| || ||||||||    
T  4724230 tatcattcacttgggtggaattaacgaacgacaaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtgacgttgct 4724131  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  4724130 gagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattag 4724076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 18 - 209
Target Start/End: Original strand, 38854209 - 38854399
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||| ||||||||||||||||||||||||||| || |||| ||||||||| || |||| |||||| ||||||||||||||||| || | |||| |    
T  38854209 tatcattcaattgggtggaattaacgaacgacgaaaacgtcacgaccatgttttgggagcacatcatgttccagtggatcgatatgcgggtgaagttggt 38854308  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 209  Q
     |||||||||||| |||||||||||| |||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||    
T  38854309 tagatcaactgaagatatcatcaaaagtttgattccgccagaagaccgtcattagtta-ggtaaggtgcattccaaccacaacaattgtctt 38854399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 1400458 - 1400304
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| || |||| |||||| ||||||||| ||||||| || ||||||||    
T  1400458 tatcattcacttgggtggaattaacgaacgacgaaaacgtgacgaccatgttttgggagcacatcatgttccagtggatccatatgcgggtgacgttgct 1400359  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  1400358 gagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattag 1400304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 18 - 185
Target Start/End: Original strand, 40009579 - 40009746
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||| |||| |||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||| | ||||||||| |    
T  40009579 tatcattcacttgggtggagttaaagaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttacagtggatcgatatgtgggtaacgttgtt 40009678  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtg 185  Q
    ||||||||||||| | |||||||| |  |||||||| | |||||||||||||||||||||||||||||    
T  40009679 gagatcaactgaagacatcatcaacagcttgattccacaagaagatcgtcattagttagggtaaggtg 40009746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 18 - 172
Target Start/End: Original strand, 18308311 - 18308465
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||||| || ||||||||||| ||||||||||||||||| || | ||||||    
T  18308311 tatcattcacttgggtggaattaacgaacgacgaaaacatgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtgatgttgct 18308410  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||| | ||||||    
T  18308411 gagatcaactgaagatatcatcaaaaatttgattccgccagtagattgacattag 18308465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 17 - 178
Target Start/End: Original strand, 33370704 - 33370865
Alignment:
Q  17 atatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgc 116  Q
    |||||||| | ||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| ||||||||||||||||| ||||||||||    
T  33370704 atatcatttagttgggtggaattaacgaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtaacgttgc 33370803  T
Q  117 tgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttaggg 178  Q
    |||||||||||||| |||| ||||| | | |||||||||||||||||| | ||||| |||||    
T  33370804 tgagatcaactgaagatattatcaacagtctgattccgccagaagatcatgattaggtaggg 33370865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 82 - 214
Target Start/End: Original strand, 7082336 - 7082468
Alignment:
Q  82 catgttacagtggatcgatatgcgagtaacgttgctgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaa 181  Q
    |||||| ||||||||||||||||| || ||||||||||||||||||||| |||||||||| || |||||||||||||||||||||||||||||| |||||    
T  7082336 catgttccagtggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaacaacttgattccgccagaagatcgtcattagttatggtaa 7082435  T
Q  182 ggtgcattccaactacaacaattgtcttacctc 214  Q
    ||||||||||||||||||||||| |||||||||    
T  7082436 ggtgcattccaactacaacaattctcttacctc 7082468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 6793542 - 6793388
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |||||||||||  |||| |||||||||||  | | ||||||    
T  6793542 tatcattcacttgagtggaattaacgaacgacgaaaatgtgacgagcatgttttgggagcacaacatgttctagtgaatcgatatgcggatgaggttgct 6793443  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    |||||||| |||| |||||||||||| |||||||| |||||||||||||||||||    
T  6793442 gagatcaattgaagatatcatcaaaagtttgattcagccagaagatcgtcattag 6793388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 18 - 172
Target Start/End: Original strand, 35565323 - 35565476
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||||||||||||||| ||||  ||||||||||||||||| || |||||||||||  |||||||||||||||| || ||||||||    
T  35565323 tatcattcacttgggtggaattaacgaacgatgaaac-gtgacgagcatgttttgggagcacaacatgttctagtggatcgatatgcgggtgacgttgct 35565421  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    |||||||||| || ||||||||| || ||||||||||||||||||||||||||||    
T  35565422 gagatcaactaaagatatcatcagaagtttgattccgccagaagatcgtcattag 35565476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 37 - 172
Target Start/End: Original strand, 1694859 - 1694994
Alignment:
Q  37 attaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgctgagatcaactgaaaatatc 136  Q
    |||||||||| ||||||| ||||||||||||||||| || |||| |||||| || |||| ||||||||| || |||||| |||||||||||||| |||||    
T  1694859 attaacgaacaacgaaaacgtgacgagcatgttttgggagcacagcatgtttcactggaacgatatgcgggtgacgttgttgagatcaactgaagatatc 1694958  T
Q  137 atcaaaaatttgattccgccagaagatcgtcattag 172  Q
    ||||||| ||||||||||||||||||||||||||||    
T  1694959 atcaaaagtttgattccgccagaagatcgtcattag 1694994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 36350461 - 36350316
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||||         ||||||||||| |||||||||||||||   || ||||||||    
T  36350461 tatcattcacttgggtggaattaatgaacgacgaaaacgtgacgagcatg---------cacaacatgttccagtggatcgatatgtaggtgacgttgct 36350371  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    ||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||    
T  36350370 gagatcaactgaagatatcatcaaaagtttgattccaccagaagatcgtcattag 36350316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 18 - 131
Target Start/End: Original strand, 3169654 - 3169767
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||| ||||||||||| |||||||||| |||||| || ||||||||    
T  3169654 tatcattcacttgggtggaattaacgaacgacgaaaacgtgacgagcatattttaagagcacaacatgttccagtggatcggtatgcgggtgacgttgct 3169753  T
Q  118 gagatcaactgaaa 131  Q
    ||||||| ||||||    
T  3169754 gagatcagctgaaa 3169767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 17 - 175
Target Start/End: Complemental strand, 17366893 - 17366735
Alignment:
Q  17 atatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgc 116  Q
    |||||||| | ||||||||||||||||||||||||||||||||| | ||||||||| || |||||||||||  ||||||| |||||||| ||| |||||     
T  17366893 atatcatttagttgggtggaattaacgaacgacgaaaatgtgacaaacatgttttgggagcacaacatgttctagtggattgatatgcgggtaccgttgt 17366794  T
Q  117 tgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagtta 175  Q
    ||||||||||| || |||| ||||| | | |||||| ||||||| ||||| ||||||||    
T  17366793 tgagatcaactaaagatattatcaagagtctgattctgccagaatatcgtgattagtta 17366735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 117 - 214
Target Start/End: Original strand, 3458940 - 3459037
Alignment:
Q  117 tgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    ||||||||| |||| |||||||||| |  |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3458940 tgagatcaattgaagatatcatcaacagcttgattccgctagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 3459037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 35927593 - 35927470
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||| | ||||||||||||||||||||||||||| ||||||| ||||||||| || |||| ||| || ||||||||||||||||| || ||||||||    
T  35927593 tatcatttagttgggtggaattaacgaacgacgaaaacgtgacgaacatgttttgggagcacatcatctttcagtggatcgatatgcgggtgacgttgct 35927494  T
Q  118 gagatcaactgaaaatatcatcaa 141  Q
    |||||||||| || ||||||||||    
T  35927493 gagatcaactaaagatatcatcaa 35927470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 112 - 209
Target Start/End: Original strand, 22283716 - 22283813
Alignment:
Q  112 gttgctgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 209  Q
    |||||| ||||||||| || |||||||||||| ||||||||| ||| || |||||| ||||||||| |||||||||||||||||||||||||||||||    
T  22283716 gttgcttagatcaacttaagatatcatcaaaagtttgattccaccataaaatcgtccttagttaggataaggtgcattccaactacaacaattgtctt 22283813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 129
Target Start/End: Original strand, 2599269 - 2599381
Alignment:
Q  17 atatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgc 116  Q
    |||||||||| ||||||||||||| ||||| |||   |  ||| |||||||||||| || ||||||||||||| ||||||||||||| | ||||||||||    
T  2599269 atatcattcagttgggtggaattagcgaacaacggcgacatgaagagcatgttttgggagcacaacatgttaccgtggatcgatatgtgtgtaacgttgc 2599368  T
Q  117 tgagatcaactga 129  Q
    |||||| ||||||    
T  2599369 tgagattaactga 2599381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 110 - 213
Target Start/End: Complemental strand, 17195423 - 17195321
Alignment:
Q  110 acgttgctgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgca--ttccaactacaacaattgtc 207  Q
    |||||||||||||||||| || |||| ||||| |||||||||||||||||||||||| ||||| ||||| |   ||||  ||||||||||||||||||||    
T  17195423 acgttgctgagatcaactaaagatattatcaacaatttgattccgccagaagatcgtgattaggtagggaa---tgcatcttccaactacaacaattgtc 17195327  T
Q  208 ttacct 213  Q
    ||||||    
T  17195326 ttacct 17195321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 110 - 238
Target Start/End: Complemental strand, 13131142 - 13131015
Alignment:
Q  110 acgttgctgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 209  Q
    ||||||| ||||||||||||| ||||  |||| | |||||||  || |||||||||| ||||| ||| | || |  | ||||||||||||||||||||||    
T  13131142 acgttgcagagatcaactgaagatattctcaacattttgattttgctagaagatcgtgattagctagag-aatgcaccttccaactacaacaattgtctt 13131044  T
Q  210 acctcggaataaggtcaaacctgttaaac 238  Q
    ||||| |||||||||||||| ||||||||    
T  13131043 acctctgaataaggtcaaacttgttaaac 13131015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 110 - 211
Target Start/End: Original strand, 18920877 - 18920977
Alignment:
Q  110 acgttgctgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 209  Q
    ||||||| ||||||||||||| ||||  |||| | |||||||||||||||||||||| ||||| ||||| || |  | ||||||||||||||||||||||    
T  18920877 acgttgcagagatcaactgaagatattctcaacagtttgattccgccagaagatcgtgattaggtaggg-aatgcaccttccaactacaacaattgtctt 18920975  T
Q  210 ac 211  Q
    ||    
T  18920976 ac 18920977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 113 - 178
Target Start/End: Original strand, 12742818 - 12742883
Alignment:
Q  113 ttgctgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttaggg 178  Q
    |||||||||||||||||| |||||||||| | | |||||||||||||||||||| ||||| |||||    
T  12742818 ttgctgagatcaactgaagatatcatcaacagtctgattccgccagaagatcgtgattaggtaggg 12742883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 3458887 - 3458944
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgaga 75  Q
    |||||||||||||||| || |||| |||||||||||| |||||||| |||||||||||    
T  3458887 tatcattcacttgggttgagttaaagaacgacgaaaacgtgacgagtatgttttgaga 3458944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 214
Target Start/End: Original strand, 40011830 - 40011864
Alignment:
Q  180 aaggtgcattccaactacaacaattgtcttacctc 214  Q
    |||||||||||||||||||||||||||||||||||    
T  40011830 aaggtgcattccaactacaacaattgtcttacctc 40011864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 213
Target Start/End: Complemental strand, 3601892 - 3601859
Alignment:
Q  180 aaggtgcattccaactacaacaattgtcttacct 213  Q
    ||||||||||||||||||||||||||||||||||    
T  3601892 aaggtgcattccaactacaacaattgtcttacct 3601859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 178
Target Start/End: Original strand, 12805636 - 12805701
Alignment:
Q  113 ttgctgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttaggg 178  Q
    |||||||||||||||||| |||||||||| | | |||||  ||||||||||||| ||||| |||||    
T  12805636 ttgctgagatcaactgaagatatcatcaacagtctgattatgccagaagatcgtgattaggtaggg 12805701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 214
Target Start/End: Complemental strand, 36312009 - 36311906
Alignment:
Q  110 acgttgctgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 209  Q
    ||||||||||||||  ||||| || |  |||| | ||| |||| ||||||||||||| ||||| ||||| || |  | ||||||||||||||||||||||    
T  36312009 acgttgctgagatcgcctgaagatcttctcaatagtttaattctgccagaagatcgtgattaggtaggg-aatgcaccttccaactacaacaattgtctt 36311911  T
Q  210 acctc 214  Q
    |||||    
T  36311910 acctc 36311906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 213
Target Start/End: Complemental strand, 1971913 - 1971883
Alignment:
Q  183 gtgcattccaactacaacaattgtcttacct 213  Q
    |||||||||||||||||||||||||||||||    
T  1971913 gtgcattccaactacaacaattgtcttacct 1971883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 213
Target Start/End: Complemental strand, 3170081 - 3170051
Alignment:
Q  183 gtgcattccaactacaacaattgtcttacct 213  Q
    |||||||||||||||||||||||||||||||    
T  3170081 gtgcattccaactacaacaattgtcttacct 3170051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 213
Target Start/End: Complemental strand, 19400911 - 19400881
Alignment:
Q  183 gtgcattccaactacaacaattgtcttacct 213  Q
    |||||||||||||||||||||||||||||||    
T  19400911 gtgcattccaactacaacaattgtcttacct 19400881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 163
Target Start/End: Original strand, 19748178 - 19748263
Alignment:
Q  77 cacaacatgttacagtggatcgatatgcgagtaacgttgctgagatcaactgaaaatatcatcaaaaatttgattccgccagaagat 163  Q
    ||||||||||| | |||||||||||||   ||| |||||||||||||  ||||| ||||  |||| ||||||||||||||| |||||    
T  19748178 cacaacatgtttccgtggatcgatatgtttgta-cgttgctgagatcgcctgaagatattctcaacaatttgattccgccataagat 19748263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 213
Target Start/End: Complemental strand, 40012164 - 40012134
Alignment:
Q  183 gtgcattccaactacaacaattgtcttacct 213  Q
    |||||||||||||||||||||||||||||||    
T  40012164 gtgcattccaactacaacaattgtcttacct 40012134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 213
Target Start/End: Complemental strand, 33371179 - 33371146
Alignment:
Q  180 aaggtgcattccaactacaacaattgtcttacct 213  Q
    ||||||||||||||||||||||||| ||||||||    
T  33371179 aaggtgcattccaactacaacaattatcttacct 33371146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 149; Significance: 8e-79; HSPs: 2)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 18 - 214
Target Start/End: Original strand, 2321 - 2517
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| ||||||||||||||||| ||||||||| |    
T  2321 tatcattcacttgggtggaattaacgaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtaacgttgat 2420  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    |||||||| |||| |||||||||| |  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2421 gagatcaattgaagatatcatcaacagcttgattccgccaaaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 2517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 213
Target Start/End: Complemental strand, 4835 - 4805
Alignment:
Q  183 gtgcattccaactacaacaattgtcttacct 213  Q
    |||||||||||||||||||||||||||||||    
T  4835 gtgcattccaactacaacaattgtcttacct 4805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 149; Significance: 8e-79; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 18 - 214
Target Start/End: Complemental strand, 10360349 - 10360153
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| || ||||||||||| ||||||||||||||||| |||| ||||||    
T  10360349 tatcattcacttgggtggaattaacgaacgatgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtaatgttgct 10360250  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    ||||||||||||| || ||||||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10360249 gagatcaactgaagatttcatcaacagcttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 10360153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 20 - 211
Target Start/End: Original strand, 3941795 - 3941986
Alignment:
Q  20 tcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgctga 119  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||| |||||| ||||||||||||||||| || |||||| |||    
T  3941795 tcattcacttgggtggaattaacgaacgacgaaaacgtgacgagcatgttttgggagcacatcatgttccagtggatcgatatgcgggtgacgttgatga 3941894  T
Q  120 gatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttac 211  Q
    ||||||||||| |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  3941895 gatcaactgaagatatcatcaacaacttgattccgccagaagatcgtcattagttagggtaaggtgcattccaacttcaacaattgtcttac 3941986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 18 - 214
Target Start/End: Complemental strand, 12968452 - 12968256
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||| |||| |||||||||||| || |||||||||||||| || ||||||||||| || |||||||||||||| |||||||||||    
T  12968452 tatcattcacttgggtggagttaaagaacgacgaaaacgttacgagcatgttttgggagcacaacatgttccattggatcgatatgcgggtaacgttgct 12968353  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    ||||||||||||| |||||||||| || |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  12968352 gagatcaactgaagatatcatcaacaacttgattcctccagaagatcgtcattagttagggtaaggtgcactccaactacaacaattgtcttacctc 12968256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 18 - 214
Target Start/End: Original strand, 42120068 - 42120264
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||| ||| |||| |||||||||||||||||||||||||||||| || ||||||||||| |||||||| |||||| | |||||||||||    
T  42120068 tatcattcacttgggcggagttaaagaacgacgaaaatgtgacgagcatgttttgggagcacaacatgttccagtggattgatatgtgggtaacgttgct 42120167  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    ||||||||||||| |||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  42120168 gagatcaactgaagatatcatcaacagcttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacgattgtcttacctc 42120264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 18 - 214
Target Start/End: Complemental strand, 42241249 - 42241053
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    |||||||||||||||||||||||| |||| ||||||| ||||||||||||||||| || ||||||||||| |||| |||||||||||| || ||||||||    
T  42241249 tatcattcacttgggtggaattaaagaacaacgaaaacgtgacgagcatgttttgggagcacaacatgtttcagttgatcgatatgcgggtgacgttgct 42241150  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    ||||||||||||| |||||| ||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42241149 gagatcaactgaagatatcaccaaaagtttgattctgccataagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 42241053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 17 - 209
Target Start/End: Original strand, 29067784 - 29067976
Alignment:
Q  17 atatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgc 116  Q
    |||||||||||||||||| |||||||||| |||||||||||||||| ||||||||| || |||| |||||| ||||||||||||||||| || | |||||    
T  29067784 atatcattcacttgggtgcaattaacgaatgacgaaaatgtgacgaccatgttttgggagcacagcatgttccagtggatcgatatgcgggtgaagttgc 29067883  T
Q  117 tgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 209  Q
    | |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  29067884 ttagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattagttagggtaaggtgcattccagctacaacaattgtctt 29067976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 18 - 206
Target Start/End: Complemental strand, 3937214 - 3937026
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||| || |||| |||||| ||||||||||||||||| || | ||||||    
T  3937214 tatcattcagttgggtggaattaacgaacgacgaaaacgtgacgaccatgttttgggagcacagcatgttccagtggatcgatatgcgggtgaagttgct 3937115  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgt 206  Q
     |||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  3937114 tagatcaactgaagatatcatcaaaagtttgattccgccacaagatcgtcattagttagggtaaggtgcattccaactacaacaattgt 3937026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 18 - 214
Target Start/End: Original strand, 29906638 - 29906834
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||| | |||| |||||||||||| ||||| | ||||||||| || ||||||||||| ||||||||||||||||| |||||||||||    
T  29906638 tatcattcacttgggtgaagttaaagaacgacgaaaacgtgacaaacatgttttgggagcacaacatgttccagtggatcgatatgcgggtaacgttgct 29906737  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    |||||||||||||||||||||||| || ||||||| |||||||||||  |||||||||||||||||||||||||||||||||||| |||||||||||    
T  29906738 gagatcaactgaaaatatcatcaacaacttgattctgccagaagatcagcattagttagggtaaggtgcattccaactacaacaactgtcttacctc 29906834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 18 - 206
Target Start/End: Original strand, 43982912 - 43983100
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||| || |||| |||||| ||||||||||||||||| || | ||||||    
T  43982912 tatcattcagttgggtggaattaacgaacgacgaaaacgtgacgaccatgttttgggagcacagcatgttccagtggatcgatatgcgggtgaagttgct 43983011  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgt 206  Q
     |||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  43983012 tagatcaactgaagatatcatcaaaagtttgattccgccacaagatcgtcattagttagggtaaggtgcattccaactacaacaattgt 43983100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 18 - 209
Target Start/End: Original strand, 17424845 - 17425036
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||| || |||||||||||  |||||||||||||||| || | ||||||    
T  17424845 tatcattcagttgggtggaattaacgaacgacgaaaacgtgacgaccatgttttgggagcacaacatgttctagtggatcgatatgcgggtgaagttgct 17424944  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 209  Q
     |||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  17424945 tagatcaactgaagatatcatcaaaagtttgattccgccacaagatcgtcattagttagggtaaggtgcattccaactacaacatttgtctt 17425036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 18 - 209
Target Start/End: Original strand, 29111214 - 29111405
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| ||||||||||||||||| |||||||||||    
T  29111214 tatcattcagttgggtggaattaacgaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtaacgttgct 29111313  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 209  Q
    ||||||||| ||| |||||||||||||||| |||||||||||| | ||||| ||| |||||||| |||||||||||||||||||||| ||||    
T  29111314 gagatcaaccgaagatatcatcaaaaatttaattccgccagaataacgtcactaggtagggtaaagtgcattccaactacaacaattatctt 29111405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 18 - 211
Target Start/End: Original strand, 5420525 - 5420718
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||| || |||| |||||| || |||||||||||||| || ||||||||    
T  5420525 tatcattcacttgagtggaattaacgaacgacgaaaacgtgacgaacatgttttgtgagcacagcatgttccaatggatcgatatgcgggtgacgttgct 5420624  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttac 211  Q
    || |||||||||| |||||||||||| ||||||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  5420625 gatatcaactgaagatatcatcaaaagtttgattccacctgaagatcgtcattagttagggtaaggtgcattccaactgcaacaattgtcttac 5420718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 20 - 213
Target Start/End: Original strand, 39393949 - 39394142
Alignment:
Q  20 tcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgctga 119  Q
    ||||||||||||||||||| ||| ||||||||||| ||||||||||||||||| || |||||||||||  |||||||||||||||| || ||||||||||    
T  39393949 tcattcacttgggtggaatcaacaaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttctagtggatcgatatgcgggtgacgttgctga 39394048  T
Q  120 gatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacct 213  Q
    ||||||||||| ||||||| || || ||||||||| |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  39394049 gatcaactgaagatatcattaacaacttgattccgtcagaagatcgtcattagttaggataaggtgcattccaactgcaacaattgtcttacct 39394142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 18 - 214
Target Start/End: Original strand, 32734703 - 32734899
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||| |||| |||| ||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||| ||||||||| |    
T  32734703 tatcattcacttgggtggagttaaagaactacgaaaatgtgacaagcatgttttgggagcacaacatgttacagtggatcgatatgcgggtaacgttgtt 32734802  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    || |||||||||| |||||||||| |  |||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||  ||||||||||    
T  32734803 gatatcaactgaagatatcatcaacagcttgattccgccaaaagatagtcattagttaaggtaaggtgcattccaactacaacaacagtcttacctc 32734899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 18 - 214
Target Start/End: Original strand, 16581878 - 16582076
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcga--tatgcgagtaacgttg 115  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| || |||| |||||| || ||||||||  |||||| || ||||||    
T  16581878 tatcattcacttgggtggaattaacgagcgacgaaaatgtgtcgagcatgttttgggagcacatcatgttccattggatcgagatatgcgggtgacgttg 16581977  T
Q  116 ctgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    ||||||||||||||| ||||||||||||  |||||||||| |||||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  16581978 ctgagatcaactgaagatatcatcaaaagcttgattccgctagaagatcttcattagttagggtaaggtgcattccaactgcaacaattggcttacctc 16582076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 18 - 172
Target Start/End: Original strand, 35491691 - 35491845
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| ||||||||||||||||| || ||||||||    
T  35491691 tatcattcacttgggtggaattaacgaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtgacgttgct 35491790  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  35491791 gagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattag 35491845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 17 - 172
Target Start/End: Complemental strand, 27130660 - 27130505
Alignment:
Q  17 atatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgc 116  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| ||||||||||||||||| || |||||||    
T  27130660 atatcattcacttgggtggaattaacgaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtgacgttgc 27130561  T
Q  117 tgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||    
T  27130560 tgagatcaactgaagatatcatcaaaagtttgattccgccagaagatagtcattag 27130505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 18 - 211
Target Start/End: Original strand, 22493327 - 22493520
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||| |||| ||||| |||||| ||||||||||||||||| ||  |||  ||||| |||||||| |||||||| |||||||| ||    
T  22493327 tatcattcacttgggtggagttaaagaacggcgaaaacgtgacgagcatgttttgggagtacagaatgttccagtggattgatatgcgggtaacgttcct 22493426  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttac 211  Q
    |||||||||| || |||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  22493427 gagatcaactaaagatatcatcaacaacttgattccgccagaagatcgtcattagttagggtaagatgcattccaactacaacaactgtcttac 22493520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 2919515 - 2919361
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||| |||||||||||| || ||||||||    
T  2919515 tatcattcacttgggtggaattaacgaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttacagtagatcgatatgcgggtgacgttgct 2919416  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    ||||||||||||| ||||||| |||| ||||||||||||| ||||||||||||||    
T  2919415 gagatcaactgaagatatcattaaaagtttgattccgccaaaagatcgtcattag 2919361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 37312645 - 37312491
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| ||||||||||||||||| || ||||||||    
T  37312645 tatcattcagttgggtggaattaacgaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtgacgttgct 37312546  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    ||||||||||||| |||||||||||| |||||||| |||||||||||||||||||    
T  37312545 gagatcaactgaagatatcatcaaaagtttgattctgccagaagatcgtcattag 37312491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 18 - 171
Target Start/End: Complemental strand, 10364787 - 10364634
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| ||||||||||||||||| || | ||||||    
T  10364787 tatcattcacttgggtggaattaacgaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtgatgttgct 10364688  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcatta 171  Q
    |||||||| |||| |||||||||||| |||||||||||||||||||||||||||    
T  10364687 gagatcaattgaagatatcatcaaaagtttgattccgccagaagatcgtcatta 10364634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 17 - 209
Target Start/End: Original strand, 22001889 - 22002081
Alignment:
Q  17 atatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgc 116  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||| || | || |||||| || |||||||||||||| || | |||||    
T  22001889 atatcattcacttgggaggaattaacgaacgacgaaaacgtgacgaccatgttttgggagctcagcatgttccaatggatcgatatgcgggtgaagttgc 22001988  T
Q  117 tgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 209  Q
    | ||||||||| || |||||||||||| ||||||||||||||||||| |||||||||||  ||||| ||||||||||||||||||||||||||    
T  22001989 ttagatcaacttaagatatcatcaaaagtttgattccgccagaagattgtcattagttattgtaagttgcattccaactacaacaattgtctt 22002081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 18 - 172
Target Start/End: Original strand, 6976892 - 6977046
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| || |||| |||||| ||||||||||||||||| || ||||||||    
T  6976892 tatcattcacttgggtgaaattaacgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagtggatcgatatgcgggtgacgttgct 6976991  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    ||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||    
T  6976992 gagatcaactgaagatatcatcaaaagtttgattccgcgagaagatcgtcattag 6977046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 19471784 - 19471630
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||| |||||| ||||| ||||||||||| || ||||||||    
T  19471784 tatcattcacttgggtggaattaacgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagtgtatcgatatgcgggtgacgttgct 19471685  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
     |||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  19471684 aagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattag 19471630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 34521834 - 34521680
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| ||||||||||||||||| || |||||| |    
T  34521834 tatcattcacttgggtggaattaacgaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtgacgttgtt 34521735  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    ||||||||||||| |||||||||||| |||||||||  || ||||||||||||||    
T  34521734 gagatcaactgaagatatcatcaaaagtttgattccctcataagatcgtcattag 34521680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 41499244 - 41499090
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||| || |||||||||||||||||||||||||| ||||||||||||||||| || |||| |||||| ||||||||||||||| | || ||||||||    
T  41499244 tatcattaacctgggtggaattaacgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagtggatcgatatgagggtgacgttgct 41499145  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  41499144 gagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattag 41499090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 18 - 209
Target Start/End: Complemental strand, 17796254 - 17796066
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||| ||||||||||||||||||||||||||| |||| |||||||||||| || ||||   ||||  |||||||||||||||| |||||||||||    
T  17796254 tatcattcagttgggtggaattaacgaacgacgaaaacgtgaagagcatgttttgggagcaca---tgttctagtggatcgatatgcgggtaacgttgct 17796158  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 209  Q
    ||||||||||||| |||||||||||| |||| ||||| |||||| |||||||||| ||||| || |||  ||||||||||||||||||||||    
T  17796157 gagatcaactgaagatatcatcaaaagtttggttccgtcagaagctcgtcattaggtagggaaatgtgtcttccaactacaacaattgtctt 17796066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 40677525 - 40677371
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||||| || || ||| |||||||  |||||||||||||||| || ||||||||    
T  40677525 tatcatccacttgggtggaattaacgaacgacgaaaacgtgacgagcatgttctgggagcacgacatgttctagtggatcgatatgcgggtgacgttgct 40677426  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    ||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||    
T  40677425 gagatcaactgaagatatcatcaaaagtttgattccgctagaagatcgtcattag 40677371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 18 - 209
Target Start/End: Original strand, 33404071 - 33404261
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||| || ||||| ||||| ||||||||||||||||| |||||||||||    
T  33404071 tatcattcagttgtgtggaattaacgaacgacgaaaacgtgacgagcatgttttgggagcacaagatgttccagtggatcgatatgcgggtaacgttgct 33404170  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 209  Q
    ||||||||||||| |||| ||||| | | ||||  |||||||||||||| ||||| ||||| || |  | ||||||||||||||||||||||    
T  33404171 gagatcaactgaagatattatcaacagtctgatgtcgccagaagatcgtgattaggtaggg-aatgcaccttccaactacaacaattgtctt 33404261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 17 - 178
Target Start/End: Original strand, 6902021 - 6902182
Alignment:
Q  17 atatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgc 116  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| ||||| |||||||||||||||||||||     
T  6902021 atatcattcagttgggtggaattaacgaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtgaatcgatatgcgagtaacgttgt 6902120  T
Q  117 tgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttaggg 178  Q
    |||||||||||||| |||| ||||| | | ||||||||| |||||||| | ||||| |||||    
T  6902121 tgagatcaactgaagatattatcaacagtctgattccgcgagaagatcatgattaggtaggg 6902182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 99 - 214
Target Start/End: Original strand, 18393486 - 18393601
Alignment:
Q  99 atatgcgagtaacgttgctgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactaca 198  Q
    ||||||| |||||||||||||||||||||||| ||||||| || || ||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  18393486 atatgcgtgtaacgttgctgagatcaactgaagatatcataaacaacttgattctgccagaagatcgtcattagtgagggtaaggtgcattccaactaca 18393585  T
Q  199 acaattgtcttacctc 214  Q
    | ||||||||||||||    
T  18393586 aaaattgtcttacctc 18393601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 178
Target Start/End: Original strand, 20148173 - 20148334
Alignment:
Q  17 atatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgc 116  Q
    |||||||| | ||||| |||||||| ||||||||||||  |||| ||||||||||  || ||||||||||| |||| |||||||||||| ||||||||||    
T  20148173 atatcatttagttggggggaattaaagaacgacgaaaacatgactagcatgttttaggagcacaacatgttccagtagatcgatatgcgggtaacgttgc 20148272  T
Q  117 tgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttaggg 178  Q
    |||||| | ||||| ||||  |||| | | |||||||||||||||||||| ||||| |||||    
T  20148273 tgagattagctgaagatattttcaacagtctgattccgccagaagatcgtgattaggtaggg 20148334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 77 - 214
Target Start/End: Complemental strand, 27650518 - 27650382
Alignment:
Q  77 cacaacatgttacagtggatcgatatgcgagtaacgttgctgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttag 176  Q
    ||||||||||||| |||||||||||||   || ||||||||||||||||||||| ||||  |||| | |||||||||||||||||||||| ||||| |||    
T  27650518 cacaacatgttaccgtggatcgatatgtttgtcacgttgctgagatcaactgaagatattctcaacagtttgattccgccagaagatcgtgattaggtag 27650419  T
Q  177 ggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    || || |  | |||||||||||||||||| ||||||||    
T  27650418 gg-aatgcaccttccaactacaacaattgacttacctc 27650382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 39799992 - 39799905
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcg 105  Q
    ||||||||||||||||||||||||||||||||||||| || |||| ||||||||| || |||| |||||| |||||||||||||||||    
T  39799992 tatcattcacttgggtggaattaacgaacgacgaaaacgtcacgaccatgttttgggagcacagcatgttccagtggatcgatatgcg 39799905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 18392093 - 18392179
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgc 104  Q
    ||||||| ||||||||||| |||| |||||||||||| ||||||||||||||||| || |||| |||||| ||||||||||||||||    
T  18392093 tatcatttacttgggtggagttaaagaacgacgaaaacgtgacgagcatgttttgggagcacatcatgttccagtggatcgatatgc 18392179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 112 - 205
Target Start/End: Original strand, 43491600 - 43491696
Alignment:
Q  112 gttgctgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaag-gtgca--ttccaactacaacaattg 205  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| || || |||  ||||  ||||||||||||||||||    
T  43491600 gttgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattaggtacggaaagaatgcaccttccaactacaacaattg 43491696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 110 - 214
Target Start/End: Complemental strand, 31991994 - 31991891
Alignment:
Q  110 acgttgctgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 209  Q
    ||||||| ||||||||||||| ||||  |||| |||||||||||||||||||||||| ||||| ||||| || |  | ||||||||||||||||||||||    
T  31991994 acgttgcagagatcaactgaagatattctcaacaatttgattccgccagaagatcgtgattaggtaggg-aatgcaccttccaactacaacaattgtctt 31991896  T
Q  210 acctc 214  Q
    |||||    
T  31991895 acctc 31991891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 151 - 209
Target Start/End: Complemental strand, 39799886 - 39799828
Alignment:
Q  151 tccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 209  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  39799886 tccgccagaagatcgtcattagttagggtaatgtgcattccaaccacaacaattgtctt 39799828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 110 - 214
Target Start/End: Complemental strand, 18036220 - 18036117
Alignment:
Q  110 acgttgctgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 209  Q
    ||||||| |||||||||| |||||||  |||| |||||||||||||||||||||||| ||||| || || || |  | ||||||||||||||||||||||    
T  18036220 acgttgcagagatcaactaaaaatattctcaacaatttgattccgccagaagatcgtgattaggta-ggaaatgcaccttccaactacaacaattgtctt 18036122  T
Q  210 acctc 214  Q
    |||||    
T  18036121 acctc 18036117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 34639023 - 34639090
Alignment:
Q  20 tcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgtt 87  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||| || |||| ||||||    
T  34639023 tcattcacttgggtggaattaacaaacgacgaaaacgtgacgagcatgttttgggagcacagcatgtt 34639090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 211
Target Start/End: Original strand, 16253600 - 16253703
Alignment:
Q  107 gtaacgttgctgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgt 206  Q
    ||||||||||||||||||||| || |||| ||| | | ||||||||| |||||||||||| ||||| ||||| ||    | |||||||||||||||||||    
T  16253600 gtaacgttgctgagatcaactaaagatattatcgacagtttgattccaccagaagatcgtgattaggtaggg-aatacaccttccaactacaacaattgt 16253698  T
Q  207 cttac 211  Q
    |||||    
T  16253699 cttac 16253703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 207
Target Start/End: Complemental strand, 15891705 - 15891609
Alignment:
Q  110 acgttgctgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtc 207  Q
    ||||||| ||||||||||||| ||||  |||| | ||||||||||| |||| ||||| ||||| ||||| || |  | ||||||||||||||||||||    
T  15891705 acgttgcggagatcaactgaagatattctcaacagtttgattccgctagaatatcgtgattaggtaggg-aatgcaccttccaactacaacaattgtc 15891609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 213
Target Start/End: Original strand, 8557380 - 8557410
Alignment:
Q  183 gtgcattccaactacaacaattgtcttacct 213  Q
    |||||||||||||||||||||||||||||||    
T  8557380 gtgcattccaactacaacaattgtcttacct 8557410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 213
Target Start/End: Complemental strand, 16582376 - 16582346
Alignment:
Q  183 gtgcattccaactacaacaattgtcttacct 213  Q
    |||||||||||||||||||||||||||||||    
T  16582376 gtgcattccaactacaacaattgtcttacct 16582346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 213
Target Start/End: Complemental strand, 22493824 - 22493794
Alignment:
Q  183 gtgcattccaactacaacaattgtcttacct 213  Q
    |||||||||||||||||||||||||||||||    
T  22493824 gtgcattccaactacaacaattgtcttacct 22493794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 213
Target Start/End: Complemental strand, 42120565 - 42120535
Alignment:
Q  183 gtgcattccaactacaacaattgtcttacct 213  Q
    |||||||||||||||||||||||||||||||    
T  42120565 gtgcattccaactacaacaattgtcttacct 42120535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 213
Target Start/End: Original strand, 10359854 - 10359883
Alignment:
Q  184 tgcattccaactacaacaattgtcttacct 213  Q
    ||||||||||||||||||||||||||||||    
T  10359854 tgcattccaactacaacaattgtcttacct 10359883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 18 - 214
Target Start/End: Complemental strand, 18070 - 17874
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||| |||| |||||||||||| |||| |||||||||||| || |||||||||||| |||||||||||||||| |||||||||||    
T  18070 tatcattcacttgggtggagttaaagaacgacgaaaacgtgatgagcatgttttgggagcacaacatgttatagtggatcgatatgcgggtaacgttgct 17971  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    ||||||||||||| |||||||||| |  |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  17970 gagatcaactgaagatatcatcaacagcttgattccgccagaagatcgtcattagttagggtaaggtgcatttcaactacaacaattgtcttacctc 17874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 141; Significance: 5e-74; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 19 - 219
Target Start/End: Original strand, 18237619 - 18237819
Alignment:
Q  19 atcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgctg 118  Q
    |||||||||||||||||| |||| ||||||||||||  |||||||||| ||||| || |||| |||||| |||||||||| |||||| ||||||||||||    
T  18237619 atcattcacttgggtggagttaaagaacgacgaaaacatgacgagcatattttgggagcacatcatgttccagtggatcggtatgcgggtaacgttgctg 18237718  T
Q  119 agatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctcggaa 218  Q
    |||||||||||| |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  18237719 agatcaactgaagatatcatcaacagtttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctctgaa 18237818  T
Q  219 t 219  Q
    |    
T  18237819 t 18237819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 18 - 214
Target Start/End: Original strand, 41217668 - 41217864
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||| |||| |||||||||||| |||| || ||||||||| || ||||||||||| ||||||||||||||||| |||||||||||    
T  41217668 tatcattcacttgggtggagttaaagaacgacgaaaaagtgaagaacatgttttgggagcacaacatgttccagtggatcgatatgcgggtaacgttgct 41217767  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    ||||||||||||| |||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  41217768 gagatcaactgaagatatcatcaacaacttgattccaccagaagatcgtcattagttagggtaaggtgcattccaactacagcaattgtcttacctc 41217864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 17 - 212
Target Start/End: Complemental strand, 39477394 - 39477199
Alignment:
Q  17 atatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgc 116  Q
    ||||||||||||||||||||||||| ||||||||||||  |||||||||||||||| || ||||||||||| ||||||||||||||||| || |||||||    
T  39477394 atatcattcacttgggtggaattaaagaacgacgaaaacatgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtgacgttgc 39477295  T
Q  117 tgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacc 212  Q
    ||||||||||| || ||||||| || || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  39477294 tgagatcaactaaagatatcattaacaacttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattatcttacc 39477199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 18 - 213
Target Start/End: Original strand, 47268952 - 47269147
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||| |||| |||||||||||| ||||||||||||||||| || ||||||||||| ||||||||||||||||| |||||||||||    
T  47268952 tatcattcacttgggtggagttaaagaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtaacgttgct 47269051  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacct 213  Q
    ||||| |||| ||||||||||||| ||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||||||  |||||||    
T  47269052 gagattaactaaaaatatcatcaacaatttgattccgccaaaagatcgtcattaattagggtaagatgcattccaactacaacaattagcttacct 47269147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 18 - 219
Target Start/End: Original strand, 34140919 - 34141120
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||| ||||||||||||||| ||||||||||| ||||||  ||||||||| || ||||||||||| ||||||||||||||||| || ||||||||    
T  34140919 tatcattcatttgggtggaattaacaaacgacgaaaacgtgacggacatgttttgggagcacaacatgttccagtggatcgatatgcgggtgacgttgct 34141018  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctcgga 217  Q
    ||||||||||||| |||||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||    
T  34141019 gagatcaactgaagatatcatcaaaagtttgatttcgccataagatcgtcattagttagggtaaggtgcattccaactgcaacaattctcttacctctga 34141118  T
Q  218 at 219  Q
    ||    
T  34141119 at 34141120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 20 - 213
Target Start/End: Original strand, 40588605 - 40588798
Alignment:
Q  20 tcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgctga 119  Q
    |||||| ||||||||||||||||||||||||||||  ||| |||||||||||| || ||||||||||| ||||||||||||||||| ||||||||| |||    
T  40588605 tcattcgcttgggtggaattaacgaacgacgaaaacatgatgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtaacgttgttga 40588704  T
Q  120 gatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacct 213  Q
    ||||||||||| |||||||||| || ||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  40588705 gatcaactgaagatatcatcaacaacttgattcggccagaagatcgtcattagtcagggtaaggtgcattccaactgcaacaattgtcttacct 40588798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 18 - 209
Target Start/End: Original strand, 17839377 - 17839569
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||| |||||| ||||||||||||||||| || | ||||||    
T  17839377 tatcattcacttgggtggaattaacgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagtggatcgatatgcgggtgaagttgct 17839476  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgcc-agaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 209  Q
     ||||||| |||| |||||||||||| |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17839477 tagatcaattgaagatatcatcaaaagtttgattccgccaaaaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 17839569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 17 - 214
Target Start/End: Original strand, 17183265 - 17183465
Alignment:
Q  17 atatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgc 116  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||  | ||||||||||| ||||||||||||||||| || | |||||    
T  17183265 atatcattcacttgggtggaattaacgaacgacgaaaacgtgacgaacatgttttggaagcacaacatgttccagtggatcgatatgcgggtgatgttgc 17183364  T
Q  117 tgagatcaactgaaaatatcatcaaaaatttgattccgccagaag---atcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacct 213  Q
    |||||||||||||| |||||||||||| |||||||| ||||||||   |||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  17183365 tgagatcaactgaagatatcatcaaaagtttgattctgccagaagatcatcgtcattagttagggtgaggtgcattccaactgcaacaattgtcttacct 17183464  T
Q  214 c 214  Q
    |    
T  17183465 c 17183465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 18 - 206
Target Start/End: Original strand, 20564813 - 20565001
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||| || |||| |||||| ||||||||||||||||| || | ||||||    
T  20564813 tatcattcagttgggtggaattaacgaacgacgaaaacgtgacgaccatgttttgggagcacagcatgttccagtggatcgatatgcgggtgaagttgct 20564912  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgt 206  Q
     |||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  20564913 tagatcaactgaagatatcatcaaaagtttgattccgccacaagatcgtcattagttagggtaaggtgcattccaactacaacatttgt 20565001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 55 - 214
Target Start/End: Complemental strand, 2206153 - 2205994
Alignment:
Q  55 tgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgctgagatcaactgaaaatatcatcaaaaatttgattccg 154  Q
    |||||||||||||||||| || ||||| ||||| ||||||||||||||||| |||||||||||||||||||||||| |||||||||| |  |||||||||    
T  2206153 tgtgacgagcatgttttgggagcacaatatgttccagtggatcgatatgcgggtaacgttgctgagatcaactgaagatatcatcaacagcttgattccg 2206054  T
Q  155 ccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  2206053 ccagaagatcgtcattagttaggataaggtgcattccaactacaacaattgtcttacctc 2205994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 18 - 172
Target Start/End: Original strand, 41048837 - 41048991
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||||||||| || ||||||||||| ||||||||||||||||| || ||||||||    
T  41048837 tatcattcacttgggtggaattaacgaacgacgaaaacgcgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtgacgttgct 41048936  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  41048937 gagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattag 41048991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 18 - 211
Target Start/End: Original strand, 30360571 - 30360763
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||||||||  ||||||||||| || |||||||||||||| || |||||||||||  ||||||| |||||||| ||  |||||||    
T  30360571 tatcattcacttgggtggaattaaaaaacgacgaaaacgtaacgagcatgttttgggagcacaacatgttctagtggattgatatgcgggtg-cgttgct 30360669  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttac 211  Q
    ||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||    
T  30360670 gagatcaactgaagatatcataaaaagtttgattccgccagaagatcgtcattagttagggtaatgtgcattccaactataactattgtcttac 30360763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 20 - 213
Target Start/End: Complemental strand, 45363394 - 45363210
Alignment:
Q  20 tcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgctga 119  Q
    ||||||||||||||||||||||| || |||||||| ||||||||||||||||| || |||| |||||| |||||||||||||         |||||||||    
T  45363394 tcattcacttgggtggaattaacaaatgacgaaaacgtgacgagcatgttttgggagcacatcatgttccagtggatcgata---------cgttgctga 45363304  T
Q  120 gatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacct 213  Q
    ||||||||||| |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  45363303 gatcaactgaagatatcatcaacaacttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactgcaacaattgtcttacct 45363210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 18 - 209
Target Start/End: Original strand, 48270702 - 48270896
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| ||||||||||||||||| || ||||||||    
T  48270702 tatcattcacttgagtggaattaacgaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtgacgttgct 48270801  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttaggg---taaggtgcattccaactacaacaattgtctt 209  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||| |||| || ||    || |  ||||||||||||||||||||||||    
T  48270802 gagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcgttaggtacggaatgaatgcacattccaactacaacaattgtctt 48270896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 18 - 209
Target Start/End: Complemental strand, 20378856 - 20378665
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||| |||| |||||||||||| ||||||| ||||||||| || ||||||||||| |||||||  |||||||| || | ||||||    
T  20378856 tatcattcacttgggtggagttaaagaacgacgaaaacgtgacgaacatgttttgggagcacaacatgttccagtggacagatatgcgggtgatgttgct 20378757  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 209  Q
    ||||||||||||| |||| || || || ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  20378756 gagatcaactgaagatataattaacaacttgattccgccagaagatcatcattagttagagtaaggtgcattccaactacaacaattgtctt 20378665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 19 - 172
Target Start/End: Complemental strand, 48315332 - 48315179
Alignment:
Q  19 atcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgctg 118  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| |||| |||||||||||| || |||||||||    
T  48315332 atcattcacttgggtggaattaacgaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtagatcgatatgcgggtgacgttgctg 48315233  T
Q  119 agatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    |||||||||||| |||||||||||| ||||||||||||| ||||||||||||||    
T  48315232 agatcaactgaagatatcatcaaaagtttgattccgccataagatcgtcattag 48315179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 18 - 214
Target Start/End: Original strand, 2356343 - 2356539
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||  ||| |||||| || |||||||||||||||||||||||| |    
T  2356343 tatcattcacttggatggaattaacgaacgacaaaaatgtgacgagcatgttttgggagaacagcatgttccaatggatcgatatgcgagtaacgttgtt 2356442  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    ||||||||||||| |||||||||||||||||||||||| | |||| ||| ||||| ||||| || |    |||||||||||||||||||||||||||    
T  2356443 gagatcaactgaagatatcatcaaaaatttgattccgctataagaccgtgattaggtagggaaatgcatcttccaactacaacaattgtcttacctc 2356539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 18 - 209
Target Start/End: Original strand, 10523122 - 10523314
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttaca-gtggatcgatatgcgagtaacgttgc 116  Q
    |||||||||||| | |||||||||||||||||||||| ||||||||||||||||| || ||| ||||||| |  ||||||||||||||| || | ||| |    
T  10523122 tatcattcactttgttggaattaacgaacgacgaaaacgtgacgagcatgttttgggagcaccacatgtttcttgtggatcgatatgcgggtgaagtttc 10523221  T
Q  117 tgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 209  Q
    | |||||||||||| |||||||||||| |||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||    
T  10523222 ttagatcaactgaatatatcatcaaaagtttgattccgcctgaaaatcgtcattagttagggtaaggtgtattccaactacaacaattgtctt 10523314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 18 - 209
Target Start/End: Complemental strand, 21614913 - 21614722
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||| ||||||||||||||||||||||||||| | ||||||||||||||| || |||| ||||||  |||||||||||||||| |||||||||||    
T  21614913 tatcattcatttgggtggaattaacgaacgacgaaaacgcgacgagcatgttttgggagcacatcatgttctagtggatcgatatgcgggtaacgttgct 21614814  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 209  Q
    ||||||||||||| |||||||||||| ||||||||||||||||| |||| ||||| ||||| || |  | || |||||||||||||||||||    
T  21614813 gagatcaactgaagatatcatcaaaattttgattccgccagaagttcgtgattaggtagggaaatgcacctttcaactacaacaattgtctt 21614722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 17 - 172
Target Start/End: Complemental strand, 36393978 - 36393823
Alignment:
Q  17 atatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgc 116  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| || ||||| ||||| ||||||||||||||||| || |||||||    
T  36393978 atatcattcacttgtgtggaattaacgaacgacgaaaacgtgacgagcatgttttgggagcacaatatgttccagtggatcgatatgcgggtgacgttgc 36393879  T
Q  117 tgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    |||||||||||||| |||||||||||| ||||||||||||| |||||| |||||||    
T  36393878 tgagatcaactgaagatatcatcaaaagtttgattccgccataagatcttcattag 36393823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 48 - 206
Target Start/End: Complemental strand, 9367243 - 9367085
Alignment:
Q  48 acgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgctgagatcaactgaaaatatcatcaaaaattt 147  Q
    ||||||| ||||||| ||||||||| || |||| |||||| ||||||||||||||||| || | |||||| |||||||||||| |||||||||||| |||    
T  9367243 acgaaaacgtgacgaccatgttttgggagcacagcatgttccagtggatcgatatgcgggtgaagttgcttagatcaactgaagatatcatcaaaagttt 9367144  T
Q  148 gattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgt 206  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  9367143 gattccgccacaagatcgtcattagttagggtaaggtgcattccaactacaacaattgt 9367085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 18 - 172
Target Start/End: Original strand, 42735316 - 42735470
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||| ||  |||| ||||||||||| || ||||||||    
T  42735316 tatcattcacttgggtggaattaacgaacgacgaaaacgtgacgagcatgttttgggagcacaacatattctagtgaatcgatatgcgggtgacgttgct 42735415  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    ||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||    
T  42735416 gagatcaactgaagatatcatcaaaagtttgattccgcaagaagatcgtcattag 42735470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 17 - 213
Target Start/End: Complemental strand, 1642741 - 1642546
Alignment:
Q  17 atatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgc 116  Q
    |||||||| | ||||||||||||||||||||| ||||| |||| |||||||||||| || |||||||||||  |||||||||||||||| |||||||||     
T  1642741 atatcatttagttgggtggaattaacgaacgatgaaaacgtgaggagcatgttttgggagcacaacatgttcaagtggatcgatatgcgtgtaacgttgt 1642642  T
Q  117 tgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacct 213  Q
    |||||||||||||| |||| ||||| | |||||||||||||||||||||| ||||| ||||| || |  | ||||||||||||||||||||||||||    
T  1642641 tgagatcaactgaagatattatcaacagtttgattccgccagaagatcgtgattaggtaggg-aatgcaccttccaactacaacaattgtcttacct 1642546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 18 - 169
Target Start/End: Complemental strand, 46862347 - 46862196
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||| ||||||| || |||| |||||| |||||||||||||||||||| ||||||||    
T  46862347 tatcattcacttggatggaattaacgaacgacgaaaacgtgacgagcttgttttgggagcacagcatgttccagtggatcgatatgcgagtgacgttgct 46862248  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcat 169  Q
    ||||| ||||||| |||| ||||||| |||||||||||||||||||||||||    
T  46862247 gagattaactgaagatatgatcaaaagtttgattccgccagaagatcgtcat 46862196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 21187452 - 21187298
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    |||||||||||||||| ||||||||||  |||||||| ||||||||||||||||| || |||||||||||  |||||||||||||||| || ||||||||    
T  21187452 tatcattcacttgggtagaattaacgattgacgaaaacgtgacgagcatgttttgggagcacaacatgttctagtggatcgatatgcgggtgacgttgct 21187353  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    ||||||||||||| |||||||||||| |||||||||| |||||||||||||||||    
T  21187352 gagatcaactgaagatatcatcaaaagtttgattccgtcagaagatcgtcattag 21187298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 30354968 - 30354814
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| ||||||||||||||| |  | ||||||||    
T  30354968 tatcattcacttgggtggaattaacgaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgtggatgacgttgct 30354869  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    ||||||| ||||| |||||||||||| |||||||| |||| ||||||||||||||    
T  30354868 gagatcagctgaagatatcatcaaaagtttgattctgccaaaagatcgtcattag 30354814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 18 - 210
Target Start/End: Complemental strand, 48220895 - 48220705
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    |||||||||||| |||||| |||| |||||||||||| ||||||||||||||  |||  |||| |||||| ||||||||| ||||||  || ||| ||||    
T  48220895 tatcattcactttggtggagttaaagaacgacgaaaacgtgacgagcatgttgggag--cacagcatgttccagtggatcaatatgcaggtgacggtgct 48220798  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctta 210  Q
    ||||||||||||| |||||||||| |  |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  48220797 gagatcaactgaagatatcatcaacagcttgattccaccataagatcgtcattagttagggtaaggtgcattccaactacaacaattatctta 48220705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 15338058 - 15337904
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||| ||||||||||||||| ||||||||||| |||| |||||||||||| || ||||||||||| ||||||||||||||||| |||||||||||    
T  15338058 tatcattcagttgggtggaattaacaaacgacgaaaacgtgatgagcatgttttgggagcacaacatgtttcagtggatcgatatgcgggtaacgttgct 15337959  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    ||||||||||||| |||| || || | | ||||||||||||||||||||||||||    
T  15337958 gagatcaactgaagatattataaacagtctgattccgccagaagatcgtcattag 15337904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 43351252 - 43351099
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||||| || ||||||||||| ||||||||||||||| | || ||||||||    
T  43351252 tatcattcacttgggtggaattaacgaacgacgaaaacatgacgagcatgttttgggagcacaacatgttccagtggatcgatatg-gggtgacgttgct 43351154  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    ||||||||||||| |||||||||||  | ||||||| ||||||||||||||||||    
T  43351153 gagatcaactgaagatatcatcaaatgtctgattccaccagaagatcgtcattag 43351099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 18 - 175
Target Start/End: Original strand, 21650578 - 21650735
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||||| || || ||||||||||| ||||||||||||||| | |||||||||||    
T  21650578 tatcattcagttgggaggaattaacgaacgacgaaaatgtgacgagcatgttatgggatcacaacatgttccagtggatcgatatgtgggtaacgttgct 21650677  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagtta 175  Q
    ||||||||||||| |||| ||||| | | ||||||||||| |||||| ||||||||||    
T  21650678 gagatcaactgaagatattatcaacagtctgattccgccataagatcatcattagtta 21650735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 77 - 209
Target Start/End: Original strand, 13920419 - 13920551
Alignment:
Q  77 cacaacatgttacagtggatcgatatgcgagtaacgttgctgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttag 176  Q
    |||| ||| |||||||||||||||||||  || | |||||| |||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||    
T  13920419 cacagcatattacagtggatcgatatgcaggtgaagttgcttagatcaactgaagatatcatcaaaaatttgatttcgccataagatcgtcattagttag 13920518  T
Q  177 ggtaaggtgcattccaactacaacaattgtctt 209  Q
    |||||| ||||||||||||||||||||||||||    
T  13920519 ggtaagatgcattccaactacaacaattgtctt 13920551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 28114546 - 28114392
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||| |||||||||||||||||||||||||||  |||||||||||||||  || ||||||||||| || |||||||| ||| | || ||||||||    
T  28114546 tatcattcagttgggtggaattaacgaacgacgaaaacatgacgagcatgttttaggagcacaacatgttccaatggatcgaaatgtgggtgacgttgct 28114447  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    ||||||||||||| ||||||||||||||||||||| | || ||||| ||||||||    
T  28114446 gagatcaactgaagatatcatcaaaaatttgattctgtcaaaagattgtcattag 28114392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 110 - 214
Target Start/End: Complemental strand, 26601839 - 26601735
Alignment:
Q  110 acgttgctgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 209  Q
    |||||| |||||||||||||| |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  26601839 acgttgttgagatcaactgaagatatcatcaatagtttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattatctt 26601740  T
Q  210 acctc 214  Q
    |||||    
T  26601739 acctc 26601735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 28979175 - 28979063
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||| ||||||||| |||| |||| ||||||||||||||||| || |||| |||||| ||||||||||||||||| || ||||||||    
T  28979175 tatcattcacttgggtgaaattaacgagcgacaaaaacgtgacgagcatgttttgggagcacagcatgttccagtggatcgatatgcgggtgacgttgct 28979076  T
Q  118 gagatcaactgaa 130  Q
    |||||||||||||    
T  28979075 gagatcaactgaa 28979063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 112 - 209
Target Start/End: Complemental strand, 17320260 - 17320163
Alignment:
Q  112 gttgctgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 209  Q
    |||||| ||||||||| || |||||||||||| |||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  17320260 gttgcttagatcaacttaagatatcatcaaaagtttgattctgccataaaatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 17320163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 132 - 209
Target Start/End: Original strand, 34139334 - 34139411
Alignment:
Q  132 atatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 209  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34139334 atatcatcaaaagtttgattctgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 34139411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 18 - 103
Target Start/End: Complemental strand, 26603358 - 26603273
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatg 103  Q
    |||||||||||||||||||||||| || ||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||    
T  26603358 tatcattcacttgggtggaattaaagagcgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatg 26603273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 158 - 214
Target Start/End: Complemental strand, 28979065 - 28979009
Alignment:
Q  158 gaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  28979065 gaagatcgtcattagttagggtaaggtgcattccaactgcaacaattgtcttacctc 28979009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 118 - 214
Target Start/End: Complemental strand, 3380727 - 3380632
Alignment:
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    ||||||||||||| ||||  |||| |||||||||| ||||||||||||| ||||| ||||| || |  | ||||||| |||||||||||||||||||    
T  3380727 gagatcaactgaagatattctcaacaatttgattctgccagaagatcgtgattaggtaggg-aatgcaccttccaacgacaacaattgtcttacctc 3380632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 77 - 172
Target Start/End: Original strand, 28066368 - 28066463
Alignment:
Q  77 cacaacatgttacagtggatcgatatgcgagtaacgttgctgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    ||||||||||| | |||||||||||||   || ||||||||||||||  ||||| ||||  |||||| |||||||||||||||| ||||| |||||    
T  28066368 cacaacatgttcctgtggatcgatatgtttgtcacgttgctgagatcgtctgaagatattctcaaaagtttgattccgccagaacatcgtgattag 28066463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 13916887 - 13916941
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttg 72  Q
    |||||||||||||||| ||||||||||| ||| ||||||||| || |||||||||    
T  13916887 tatcattcacttgggttgaattaacgaatgacaaaaatgtgatgaccatgttttg 13916941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 214
Target Start/End: Original strand, 150201 - 150337
Alignment:
Q  77 cacaacatgttacagtggatcgatatgcgagtaacgttgctgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttag 176  Q
    |||| |||||| | ||||||||||||    || |||||| |||||||  ||||| ||||  |||| |||||||||| || |||||||||| ||||| |||    
T  150201 cacatcatgttcccgtggatcgatatatttgtcacgttgttgagatcgcctgaagatattctcaacaatttgattctgctagaagatcgtgattaggtag 150300  T
Q  177 ggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    || || |  | |||||||||||||||||| ||||||||    
T  150301 gg-aatgcaccttccaactacaacaattggcttacctc 150337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 178
Target Start/End: Original strand, 11824839 - 11824907
Alignment:
Q  110 acgttgctgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttaggg 178  Q
    ||||||| ||||||||||||| ||||  |||| | ||||||||||| |||||||||| ||||| |||||    
T  11824839 acgttgcagagatcaactgaagatattttcaacagtttgattccgctagaagatcgtgattaggtaggg 11824907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 42683009 - 42683052
Alignment:
Q  17 atatcattcacttgggtggaattaacgaacgacgaaaatgtgac 60  Q
    ||||||||||||| |||||||||||||||| ||||||| |||||    
T  42683009 atatcattcactttggtggaattaacgaacaacgaaaacgtgac 42683052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 213
Target Start/End: Complemental strand, 17183766 - 17183736
Alignment:
Q  183 gtgcattccaactacaacaattgtcttacct 213  Q
    |||||||||||||||||||||||||||||||    
T  17183766 gtgcattccaactacaacaattgtcttacct 17183736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 213
Target Start/End: Complemental strand, 18238115 - 18238085
Alignment:
Q  183 gtgcattccaactacaacaattgtcttacct 213  Q
    |||||||||||||||||||||||||||||||    
T  18238115 gtgcattccaactacaacaattgtcttacct 18238085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 213
Target Start/End: Complemental strand, 41218163 - 41218133
Alignment:
Q  183 gtgcattccaactacaacaattgtcttacct 213  Q
    |||||||||||||||||||||||||||||||    
T  41218163 gtgcattccaactacaacaattgtcttacct 41218133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 224
Target Start/End: Original strand, 15337567 - 15337603
Alignment:
Q  188 ttccaactacaacaattgtcttacctcggaataaggt 224  Q
    ||||||||||||||||||||||||||| |||| ||||    
T  15337567 ttccaactacaacaattgtcttacctctgaatgaggt 15337603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Complemental strand, 30361064 - 30361036
Alignment:
Q  185 gcattccaactacaacaattgtcttacct 213  Q
    |||||||||||||||||||||||||||||    
T  30361064 gcattccaactacaacaattgtcttacct 30361036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 138; Significance: 3e-72; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 20 - 209
Target Start/End: Original strand, 801223 - 801412
Alignment:
Q  20 tcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgctga 119  Q
    |||||||||||||| || |||| |||||||||||| ||||||| ||||||||| || |||| |||||| ||||||||||||||||| || ||||||||||    
T  801223 tcattcacttgggtagagttaaagaacgacgaaaacgtgacgaccatgttttgggagcacagcatgttccagtggatcgatatgcgggtgacgttgctga 801322  T
Q  120 gatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 209  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  801323 gatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 801412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 20 - 210
Target Start/End: Original strand, 29108198 - 29108388
Alignment:
Q  20 tcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgctga 119  Q
    ||||||||||||||||||||||| ||||||||||| |||| |||||||||||| || |||| |||||| ||||||||||||||||| || ||||||||||    
T  29108198 tcattcacttgggtggaattaacaaacgacgaaaacgtgaagagcatgttttgggagcacagcatgttccagtggatcgatatgcgggtgacgttgctga 29108297  T
Q  120 gatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctta 210  Q
    ||||||||||| |||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  29108298 gatcaactgaagatatgatcaacaacttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactgcaacaattttctta 29108388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 18 - 206
Target Start/End: Original strand, 6205540 - 6205728
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||| || |||| |||||| ||||||||||||||||| || | ||||||    
T  6205540 tatcattcagttgggtggaattaacgaacgacgaaaacgtgacgaccatgttttgggagcacagcatgttccagtggatcgatatgcgggtgaagttgct 6205639  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgt 206  Q
     |||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  6205640 tagatcaactgaagatatcatcaaaagtttgattccgccacaagatcgtcattagttagggtaaggtgcattccaactacaacatttgt 6205728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 18 - 206
Target Start/End: Original strand, 11692507 - 11692695
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||  | ||||||||||| ||||||||||||||||| || | ||||||    
T  11692507 tatcattcagttgggtggaattaacgaacgacgaaaacgtgacgaacatgttttggaagcacaacatgttccagtggatcgatatgcgggtgaagttgct 11692606  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgt 206  Q
     |||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11692607 tagatcaactgaagatatcatcaaaagtttgattccgccacaagatcgtcattagttagggtaaggtgcattccaactacaacatttgt 11692695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 18 - 214
Target Start/End: Complemental strand, 35058888 - 35058692
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||| |||| |||||||||||| || |||||||||||||| || ||||||||||| ||||||||||||||||| |||||||||||    
T  35058888 tatcattcacttgggtggagttaaagaacgacgaaaacgttacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtaacgttgct 35058789  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctc 214  Q
    |||||||||| || |||||||||| |  || ||||| | |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  35058788 gagatcaactaaagatatcatcaacatcttaattccacaagaagatcgtcattagttagggtaaggtacattccaactacaacaattgtcttacctc 35058692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 18 - 209
Target Start/End: Original strand, 27640236 - 27640427
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||  | |||| |||||| ||||||||||||||||| || | ||||||    
T  27640236 tatcattcagttgggtggaattaacgaacgacgaaaacgtgacgaccatgttttggaagcacagcatgttccagtggatcgatatgcgggtgaagttgct 27640335  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 209  Q
     |||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  27640336 tagatcaactgaagatatcatcaaaagtttgattccgccacaagatcgtcattagttagggtaaggtgcattccaactacaacatttgtctt 27640427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 20 - 210
Target Start/End: Original strand, 29066611 - 29066801
Alignment:
Q  20 tcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgctga 119  Q
    ||||||||||||||||||||||| ||||||||||| |||| |||||||||||| || |||| |||||| ||||||||||||||||| || | ||||||||    
T  29066611 tcattcacttgggtggaattaacaaacgacgaaaacgtgaagagcatgttttgggagcacagcatgttccagtggatcgatatgcgggtgatgttgctga 29066710  T
Q  120 gatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctta 210  Q
    ||||||||||| |||| ||||| || ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  29066711 gatcaactgaagatatgatcaacaacttgattccgccagtagatcgtcattagttagggtaaggtgcattccaactgcaacaattttctta 29066801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 20 - 210
Target Start/End: Original strand, 29075624 - 29075814
Alignment:
Q  20 tcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgctga 119  Q
    ||||||||||||||||||||||| ||||||||||| |||| |||||||||||| || |||| |||||| ||||||||||||||||| || | ||||||||    
T  29075624 tcattcacttgggtggaattaacaaacgacgaaaacgtgaagagcatgttttgggagcacagcatgttccagtggatcgatatgcgggtgatgttgctga 29075723  T
Q  120 gatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctta 210  Q
    ||||||||||| |||| ||||| || ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  29075724 gatcaactgaagatatgatcaacaacttgattccgccagcagatcgtcattagttagggtaaggtgcattccaactgcaacaattttctta 29075814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 20 - 210
Target Start/End: Original strand, 29110596 - 29110786
Alignment:
Q  20 tcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgctga 119  Q
    ||||||||||||||||||||||| ||||||||||| |||| |||||||||||| || |||| |||||| ||||||||||||||||| || | ||||||||    
T  29110596 tcattcacttgggtggaattaacaaacgacgaaaacgtgaagagcatgttttgggagcacagcatgttccagtggatcgatatgcgggtgatgttgctga 29110695  T
Q  120 gatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctta 210  Q
    ||||||||||| |||| ||||| || ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  29110696 gatcaactgaagatatgatcaacaacttgattccgccagcagatcgtcattagttagggtaaggtgcattccaactgcaacaattttctta 29110786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 20 - 172
Target Start/End: Original strand, 13402591 - 13402743
Alignment:
Q  20 tcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgctga 119  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||||||| || | ||||||||| ||||||||||||||||| || ||||||||||    
T  13402591 tcattcacttgagtggaattaacgaacgacgaaaacgtgacgagcatgttttgggagcccaacatgttccagtggatcgatatgcgggtgacgttgctga 13402690  T
Q  120 gatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  13402691 gatcaactgaagatatcatcaaaaatttgattccgccagaagatcgtcattag 13402743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 32027781 - 32027627
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||||| || |||||||||||  ||||||| |||||||| || ||||||||    
T  32027781 tatcattcacttgggtggaattaacgaatgacgaaaacgtgacgagcatgttttgggagcacaacatgttctagtggattgatatgcgggtgacgttgct 32027682  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  32027681 gagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattag 32027627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 32037840 - 32037686
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||||| || |||||||||||  ||||||| |||||||| || ||||||||    
T  32037840 tatcattcacttgggtggaattaacgaatgacgaaaacgtgacgagcatgttttgggagcacaacatgttctagtggattgatatgcgggtgacgttgct 32037741  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  32037740 gagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattag 32037686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 18 - 172
Target Start/End: Original strand, 12396832 - 12396986
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||| |||||||||||||||||||||||||||  |||||||||||||||| || |||| |||||| ||||||||||||||||| |||||||||||    
T  12396832 tatcattcaattgggtggaattaacgaacgacgaaaacatgacgagcatgttttgggagcacagcatgttccagtggatcgatatgcgggtaacgttgct 12396931  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    |||||| |||||| |||||||||| || |||||||||||| ||||||||||||||    
T  12396932 gagatctactgaagatatcatcaacaacttgattccgccaaaagatcgtcattag 12396986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 18 - 209
Target Start/End: Original strand, 14115093 - 14115283
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    |||||||||||||||||||| ||| |||||||||||| |||||||||||||| || || ||||||||||| ||||||||| ||||||| ||||||||| |    
T  14115093 tatcattcacttgggtggaagtaaagaacgacgaaaacgtgacgagcatgttctgggagcacaacatgttccagtggatcaatatgcgggtaacgttgtt 14115192  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 209  Q
    ||||||||||||| |||||||||| | | |||||| |||||||||| || ||||| ||||| || |  | ||||||||||||||||||||||    
T  14115193 gagatcaactgaagatatcatcaagagtctgattctgccagaagatagtgattaggtaggg-aatgcaccttccaactacaacaattgtctt 14115283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 21 - 172
Target Start/End: Complemental strand, 30257729 - 30257578
Alignment:
Q  21 cattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgctgag 120  Q
    |||||| |||||||||||||| |||||||||||| ||||||||||||||||| || |||| ||||||  |||||||||||||| | || |||||||||||    
T  30257729 cattcagttgggtggaattaaagaacgacgaaaacgtgacgagcatgttttgggagcacatcatgttctagtggatcgatatgtgggtgacgttgctgag 30257630  T
Q  121 atcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    ||||| |||| |||||||||||| ||||||||||| ||||||||||||||||    
T  30257629 atcaattgaagatatcatcaaaagtttgattccgctagaagatcgtcattag 30257578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 34803049 - 34802895
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||| ||||||||||||||||||||||||||||| |||| |||||||||  | || ||||||||||| ||||  ||||||||||| || ||||||||    
T  34803049 tatcattgacttgggtggaattaacgaacgacgaaaacgtgatgagcatgttcagggagcacaacatgttccagtaaatcgatatgcgggtgacgttgct 34802950  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattag 172  Q
    ||||||||||||| |||||||||||| ||||||| ||||| ||||||||||||||    
T  34802949 gagatcaactgaagatatcatcaaaagtttgatttcgccaaaagatcgtcattag 34802895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 92 - 214
Target Start/End: Complemental strand, 3765867 - 3765744
Alignment:
Q  92 tggatcgatatgcgagtaacgttgctgagatcaactgaaaatatcatcaaaaatttga-ttccgccagaagatcgtcattagttagggtaaggtgcattc 190  Q
    |||||||||||||| || ||||||||||||||||||||| |||||||||||| ||| | |||| |||||||||| |||||||||||||||||||||||||    
T  3765867 tggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaaaagtttaaattccaccagaagatcatcattagttagggtaaggtgcattc 3765768  T
Q  191 caactacaacaattgtcttacctc 214  Q
    ||||| ||||||||||||||||||    
T  3765767 caactgcaacaattgtcttacctc 3765744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 18 - 143
Target Start/End: Original strand, 22305852 - 22305977
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||||||||||||||||||||||||||||||| || |||| ||||||||| || ||||||||||| ||||||||||||||||| || | |||| |    
T  22305852 tatcattcacttgggtggaattaacgaacgacgaaaacgtcacgaccatgttttgggagcacaacatgttccagtggatcgatatgcgggtgaagttggt 22305951  T
Q  118 gagatcaactgaaaatatcatcaaaa 143  Q
     |||||||||||| ||||||||||||    
T  22305952 tagatcaactgaagatatcatcaaaa 22305977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 112 - 209
Target Start/End: Original strand, 2192547 - 2192644
Alignment:
Q  112 gttgctgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 209  Q
    |||||| ||||||||| || |||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  2192547 gttgcttagatcaacttaagatatcatcaaaattttgattccgccataaaatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 2192644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 112 - 209
Target Start/End: Complemental strand, 24021156 - 24021059
Alignment:
Q  112 gttgctgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 209  Q
    |||||| ||||||||| || |||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  24021156 gttgcttagatcaacttaagatatcatcaaaagtttgattccgccataaaatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 24021059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 91 - 214
Target Start/End: Complemental strand, 17465415 - 17465293
Alignment:
Q  91 gtggatcgatatgcgagtaacgttgctgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattc 190  Q
    |||||||||||||   || ||||||| ||||||||||||| ||||  |||| | ||||||||||||| |||||||| ||||| ||| | ||    | |||    
T  17465415 gtggatcgatatgtttgtcacgttgcagagatcaactgaagatattctcaacagtttgattccgccaaaagatcgtgattaggtagag-aatacaccttc 17465317  T
Q  191 caactacaacaattgtcttacctc 214  Q
    ||||||||||||||||||||||||    
T  17465316 caactacaacaattgtcttacctc 17465293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 124 - 171
Target Start/End: Complemental strand, 35021284 - 35021237
Alignment:
Q  124 aactgaaaatatcatcaaaaatttgattccgccagaagatcgtcatta 171  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||||    
T  35021284 aactgaagatatcatcaaaagtttgattccgccagaagatcgtcatta 35021237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 191 - 238
Target Start/End: Original strand, 28051596 - 28051643
Alignment:
Q  191 caactacaacaattgtcttacctcggaataaggtcaaacctgttaaac 238  Q
    |||||||||| ||| ||||||||| |||||||||||||||||||||||    
T  28051596 caactacaaccattttcttacctctgaataaggtcaaacctgttaaac 28051643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 213
Target Start/End: Original strand, 35058392 - 35058422
Alignment:
Q  183 gtgcattccaactacaacaattgtcttacct 213  Q
    |||||||||||||||||||||||||||||||    
T  35058392 gtgcattccaactacaacaattgtcttacct 35058422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 134; Significance: 7e-70; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 18 - 219
Target Start/End: Original strand, 1844 - 2045
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgct 117  Q
    ||||||||| ||||||||||||||| ||||||||||| ||||||  ||||||||| || ||||||||||| ||||||||||||||||| || ||||||||    
T  1844 tatcattcatttgggtggaattaacaaacgacgaaaacgtgacggacatgttttgggagcacaacatgttccagtggatcgatatgcgggtgacgttgct 1943  T
Q  118 gagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctcgga 217  Q
    ||||||||||||| |||||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||    
T  1944 gagatcaactgaagatatcatcaaaagtttgatttcgccataagatcgtcattagttagggtaaggtgcattccaactgcaacaattctcttacctctga 2043  T
Q  218 at 219  Q
    ||    
T  2044 at 2045  T

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Target: scaffold0004 (Bit Score: 77; Significance: 7e-36; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 113 - 209
Target Start/End: Original strand, 64098 - 64194
Alignment:
Q  113 ttgctgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 209  Q
    |||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  64098 ttgctgagatcaactgaagatatcatcaaaagtttgattccaccagaagatcgtcattaggtagggtaaggtacattccaactacaacaattgtctt 64194  T

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Target: scaffold0004; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 64029 - 64095
Alignment:
Q  18 tatcattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacat 84  Q
    ||||||||| ||| ||||||| || |||||||||||| ||||||||||||||||| || ||||||||    
T  64029 tatcattcagttgagtggaatcaatgaacgacgaaaacgtgacgagcatgttttgggagcacaacat 64095  T

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Target: scaffold0031 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 112 - 209
Target Start/End: Original strand, 85474 - 85571
Alignment:
Q  112 gttgctgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 209  Q
    |||||| ||||||||| || |||||||||||| |||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  85474 gttgcttagatcaacttaagatatcatcaaaagtttgattcagccataaaatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 85571  T

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Target: scaffold0181 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 135
Target Start/End: Original strand, 24962 - 25076
Alignment:
Q  21 cattcacttgggtggaattaacgaacgacgaaaatgtgacgagcatgttttgagaccacaacatgttacagtggatcgatatgcgagtaacgttgctgag 120  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||||  |||||||| || ||||  |||| ||||| ||    
T  24962 cattcagttgggtggaattaacgaacaacgaaaatgtgacgagcatgttttgggagcacaacatgttctagtggatctatttgcggataacattgctaag 25061  T
Q  121 atcaactgaaaatat 135  Q
    |||||||||| ||||    
T  25062 atcaactgaagatat 25076  T

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Target: scaffold0268 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0268
Description:

Target: scaffold0268; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 112 - 209
Target Start/End: Original strand, 14616 - 14713
Alignment:
Q  112 gttgctgagatcaactgaaaatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 209  Q
    |||||| ||||||||| || || ||||||||| | |||| |||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  14616 gttgcttagatcaacttaagatttcatcaaaagtatgataccgccataagatcgtcgttagttagggtaacgtgcattccaactacaacaattgtctt 14713  T

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Target: scaffold0861 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0861
Description:

Target: scaffold0861; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 213
Target Start/End: Complemental strand, 2504 - 2474
Alignment:
Q  183 gtgcattccaactacaacaattgtcttacct 213  Q
    |||||||||||||||||||||||||||||||    
T  2504 gtgcattccaactacaacaattgtcttacct 2474  T

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