View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1773_low_174 (Length: 216)
Name: NF1773_low_174
Description: NF1773
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1773_low_174 |
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Alignment Details
Target: chr4 (Bit Score: 175; Significance: 2e-94; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 15 - 201
Target Start/End: Original strand, 50802197 - 50802383
Alignment:
| Q |
15 |
gcaaaggactctcaatggtgactcgcgcgacacaattcttacacacatggccagcagcacacaatatgcgcaacaaagatcactgcactgtatgattggt |
114 |
Q |
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| T |
50802197 |
gcaaaggactctcaatggtgactcgcgcgacacaattcttacacacatggccagcagcacacaatatgcgcaacaaagatcactgcactgtatgattggt |
50802296 |
T |
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| Q |
115 |
ttctctgcgcctgcggcatgcagaagtaaaatgcaacatagatgcgaacaatactcaaagatcaaaacggtgtgggtgctggttttt |
201 |
Q |
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| T |
50802297 |
ttctctgcgcctgcggcatgcagaagtaaaatgcagcatagatgcgaacagtactcaaagatcaaaacggtgcgggtgctggttttt |
50802383 |
T |
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