View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1773_low_25 (Length: 571)

Name: NF1773_low_25
Description: NF1773
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1773_low_25
NF1773_low_25
[»] chr4 (56 HSPs)
chr4 (15-292)||(55015180-55015460)
chr4 (331-480)||(55015020-55015178)
chr4 (476-560)||(55014627-55014711)
chr4 (310-381)||(34960142-34960213)
chr4 (305-345)||(15170120-15170160)
chr4 (305-349)||(32923247-32923291)
chr4 (305-381)||(40070953-40071029)
chr4 (305-354)||(4916155-4916204)
chr4 (304-344)||(7282556-7282596)
chr4 (305-345)||(16451209-16451249)
chr4 (304-348)||(34968341-34968385)
chr4 (305-373)||(35050535-35050603)
chr4 (313-381)||(35305244-35305312)
chr4 (305-381)||(42344603-42344679)
chr4 (305-345)||(45970728-45970768)
chr4 (308-344)||(47537468-47537504)
chr4 (305-349)||(50380853-50380897)
chr4 (305-349)||(50668340-50668384)
chr4 (304-364)||(52936640-52936700)
chr4 (310-349)||(37422196-37422235)
chr4 (305-348)||(37970192-37970235)
chr4 (306-345)||(42198597-42198636)
chr4 (306-345)||(44689493-44689532)
chr4 (306-345)||(46409502-46409541)
chr4 (311-381)||(3782350-3782420)
chr4 (305-347)||(13984661-13984703)
chr4 (311-349)||(21935018-21935056)
chr4 (311-349)||(43722771-43722809)
chr4 (305-355)||(51002287-51002337)
chr4 (311-364)||(3299096-3299149)
chr4 (304-345)||(3936626-3936667)
chr4 (305-350)||(10351825-10351870)
chr4 (319-376)||(17948126-17948183)
chr4 (316-381)||(47266163-47266228)
chr4 (304-349)||(47704581-47704626)
chr4 (305-349)||(6459941-6459985)
chr4 (305-345)||(7030914-7030954)
chr4 (305-345)||(10069109-10069149)
chr4 (305-381)||(10082402-10082478)
chr4 (320-364)||(12192493-12192537)
chr4 (305-381)||(17729426-17729502)
chr4 (301-345)||(20383484-20383528)
chr4 (305-345)||(23225865-23225905)
chr4 (305-345)||(28751211-28751251)
chr4 (305-381)||(29908056-29908132)
chr4 (305-381)||(31879863-31879938)
chr4 (305-349)||(40160798-40160842)
chr4 (305-345)||(43034363-43034403)
chr4 (305-349)||(44383448-44383492)
chr4 (305-341)||(44572591-44572627)
chr4 (329-381)||(46434745-46434797)
chr4 (305-345)||(51436627-51436667)
chr4 (305-349)||(51465337-51465381)
chr4 (305-349)||(53530009-53530053)
chr4 (305-349)||(54500569-54500613)
chr4 (305-345)||(55922407-55922447)
[»] chr3 (43 HSPs)
chr3 (315-381)||(32632331-32632397)
chr3 (310-381)||(10840423-10840493)
chr3 (304-355)||(43630429-43630480)
chr3 (305-354)||(2078240-2078289)
chr3 (304-349)||(25289330-25289375)
chr3 (305-349)||(2186444-2186488)
chr3 (305-345)||(5941315-5941355)
chr3 (305-345)||(8942017-8942057)
chr3 (305-349)||(27432234-27432278)
chr3 (305-349)||(33633335-33633379)
chr3 (305-381)||(45309128-45309204)
chr3 (306-345)||(41834551-41834590)
chr3 (305-381)||(53438680-53438760)
chr3 (311-381)||(7829902-7829972)
chr3 (305-347)||(23332650-23332692)
chr3 (305-343)||(32303360-32303398)
chr3 (311-381)||(33634504-33634574)
chr3 (311-349)||(46903914-46903952)
chr3 (296-381)||(47377334-47377420)
chr3 (305-355)||(48688115-48688164)
chr3 (305-354)||(18737108-18737157)
chr3 (304-345)||(19468450-19468491)
chr3 (305-354)||(22486683-22486732)
chr3 (304-345)||(25441521-25441562)
chr3 (312-349)||(30696728-30696765)
chr3 (304-345)||(38130980-38131021)
chr3 (312-349)||(38559913-38559950)
chr3 (315-348)||(53852745-53852778)
chr3 (305-345)||(1757690-1757730)
chr3 (305-345)||(2105719-2105759)
chr3 (305-381)||(7300772-7300848)
chr3 (305-349)||(7464508-7464552)
chr3 (305-349)||(21160052-21160096)
chr3 (305-345)||(28244125-28244165)
chr3 (311-355)||(29791782-29791826)
chr3 (305-345)||(33223868-33223908)
chr3 (305-345)||(34326004-34326044)
chr3 (305-349)||(35355612-35355656)
chr3 (329-381)||(37887916-37887968)
chr3 (305-345)||(43490438-43490478)
chr3 (315-355)||(49088762-49088802)
chr3 (305-345)||(51882221-51882261)
chr3 (309-349)||(55010117-55010157)
[»] chr1 (38 HSPs)
chr1 (305-381)||(32950746-32950822)
chr1 (311-380)||(46082342-46082411)
chr1 (305-372)||(4806789-4806856)
chr1 (311-354)||(8153141-8153184)
chr1 (304-379)||(28832158-28832233)
chr1 (305-355)||(3573335-3573385)
chr1 (305-359)||(41182613-41182667)
chr1 (299-364)||(10841894-10841959)
chr1 (305-381)||(16924478-16924554)
chr1 (306-349)||(3248778-3248821)
chr1 (305-344)||(27853355-27853394)
chr1 (310-381)||(52262151-52262222)
chr1 (310-344)||(14392-14426)
chr1 (305-351)||(49843434-49843480)
chr1 (311-381)||(51046148-51046218)
chr1 (296-381)||(51988771-51988857)
chr1 (304-381)||(7454563-7454640)
chr1 (304-381)||(9265821-9265898)
chr1 (304-349)||(11410626-11410671)
chr1 (305-346)||(15729430-15729471)
chr1 (316-381)||(32923829-32923894)
chr1 (304-349)||(33153897-33153942)
chr1 (304-345)||(33229703-33229744)
chr1 (301-345)||(619429-619473)
chr1 (305-345)||(1091179-1091219)
chr1 (305-345)||(3509962-3510002)
chr1 (305-345)||(10356204-10356244)
chr1 (304-376)||(14969809-14969881)
chr1 (305-345)||(25365017-25365057)
chr1 (305-345)||(26803472-26803512)
chr1 (305-349)||(30678830-30678874)
chr1 (305-345)||(30795701-30795741)
chr1 (310-354)||(34083342-34083386)
chr1 (305-349)||(36371057-36371101)
chr1 (305-341)||(45774574-45774610)
chr1 (305-377)||(48681922-48681994)
chr1 (305-349)||(50849090-50849134)
chr1 (305-345)||(52441532-52441572)
[»] chr2 (46 HSPs)
chr2 (315-381)||(3196570-3196636)
chr2 (304-349)||(41682404-41682449)
chr2 (305-345)||(13196700-13196740)
chr2 (305-381)||(27412821-27412897)
chr2 (305-381)||(31837921-31837997)
chr2 (305-345)||(33966321-33966361)
chr2 (305-344)||(19189766-19189805)
chr2 (318-381)||(38727499-38727562)
chr2 (305-347)||(32458116-32458158)
chr2 (331-381)||(41939093-41939143)
chr2 (304-349)||(30799105-30799150)
chr2 (308-345)||(37984358-37984395)
chr2 (308-349)||(41853368-41853409)
chr2 (305-345)||(39088820-39088860)
chr2 (305-381)||(40967356-40967432)
chr2 (305-345)||(42475131-42475171)
chr2 (305-345)||(44694688-44694728)
chr2 (306-381)||(29872157-29872232)
chr2 (310-381)||(40661785-40661856)
chr2 (311-349)||(145028-145066)
chr2 (311-349)||(14364060-14364098)
chr2 (311-349)||(24548123-24548161)
chr2 (334-380)||(29949094-29949140)
chr2 (319-381)||(32957528-32957590)
chr2 (308-381)||(7294739-7294812)
chr2 (304-345)||(23250341-23250382)
chr2 (305-354)||(35727437-35727486)
chr2 (304-345)||(38443539-38443580)
chr2 (316-349)||(41672301-41672334)
chr2 (305-345)||(2256971-2257011)
chr2 (305-349)||(8761581-8761625)
chr2 (305-349)||(17736793-17736837)
chr2 (305-349)||(17842729-17842773)
chr2 (310-370)||(19549441-19549501)
chr2 (315-351)||(20517032-20517068)
chr2 (305-381)||(21497667-21497743)
chr2 (305-345)||(22571886-22571926)
chr2 (305-345)||(25598583-25598623)
chr2 (305-381)||(30045453-30045529)
chr2 (305-381)||(30050616-30050692)
chr2 (305-381)||(30141660-30141736)
chr2 (305-345)||(34977204-34977244)
chr2 (305-345)||(37320538-37320578)
chr2 (305-345)||(37620298-37620338)
chr2 (310-350)||(37630203-37630243)
chr2 (333-381)||(42451461-42451509)
[»] chr7 (40 HSPs)
chr7 (305-354)||(25251510-25251559)
chr7 (305-354)||(9522912-9522961)
chr7 (304-349)||(23221391-23221436)
chr7 (305-354)||(38553818-38553867)
chr7 (304-349)||(43346581-43346626)
chr7 (304-381)||(46849092-46849169)
chr7 (305-381)||(7388024-7388100)
chr7 (305-345)||(8879768-8879808)
chr7 (308-344)||(23158456-23158492)
chr7 (305-349)||(24839488-24839532)
chr7 (305-345)||(27263341-27263381)
chr7 (305-345)||(27270235-27270275)
chr7 (305-345)||(34934301-34934341)
chr7 (329-381)||(43267481-43267533)
chr7 (311-354)||(19684224-19684267)
chr7 (310-381)||(35001116-35001186)
chr7 (304-375)||(38779979-38780050)
chr7 (311-349)||(22267587-22267625)
chr7 (304-349)||(34722037-34722083)
chr7 (315-384)||(3536236-3536305)
chr7 (304-345)||(22991412-22991453)
chr7 (308-349)||(23172403-23172444)
chr7 (315-384)||(27158869-27158938)
chr7 (316-349)||(31885962-31885995)
chr7 (304-348)||(2450579-2450623)
chr7 (305-381)||(3883055-3883131)
chr7 (305-381)||(5458056-5458132)
chr7 (305-381)||(5526725-5526801)
chr7 (310-354)||(8261455-8261499)
chr7 (305-345)||(8683070-8683110)
chr7 (305-349)||(24099252-24099296)
chr7 (305-345)||(27993050-27993090)
chr7 (305-381)||(28200370-28200446)
chr7 (305-381)||(30006077-30006153)
chr7 (304-344)||(30467980-30468020)
chr7 (305-381)||(32228439-32228515)
chr7 (305-349)||(34448627-34448671)
chr7 (310-349)||(36284916-36284956)
chr7 (305-345)||(39280839-39280879)
chr7 (305-345)||(46551995-46552035)
[»] chr6 (31 HSPs)
chr6 (304-381)||(2617190-2617267)
chr6 (305-381)||(331871-331947)
chr6 (305-372)||(1989037-1989103)
chr6 (305-352)||(7730664-7730711)
chr6 (310-349)||(17420735-17420774)
chr6 (303-349)||(9244126-9244172)
chr6 (305-381)||(8629681-8629757)
chr6 (305-373)||(9311923-9311991)
chr6 (308-344)||(14773004-14773040)
chr6 (305-345)||(28951399-28951439)
chr6 (305-345)||(29335596-29335636)
chr6 (305-352)||(6470630-6470677)
chr6 (305-348)||(24438300-24438343)
chr6 (308-347)||(30345398-30345437)
chr6 (306-349)||(32409195-32409238)
chr6 (311-345)||(1918479-1918513)
chr6 (327-381)||(17113445-17113499)
chr6 (304-345)||(361753-361794)
chr6 (308-345)||(2726438-2726475)
chr6 (305-354)||(10497164-10497213)
chr6 (304-349)||(23635731-23635776)
chr6 (305-345)||(2213297-2213337)
chr6 (305-345)||(3358391-3358431)
chr6 (305-381)||(4826290-4826366)
chr6 (305-381)||(8138443-8138519)
chr6 (305-345)||(13496116-13496156)
chr6 (305-349)||(19277574-19277618)
chr6 (329-381)||(27080789-27080841)
chr6 (304-336)||(31374018-31374050)
chr6 (305-345)||(33938700-33938740)
chr6 (305-381)||(34701147-34701223)
[»] chr8 (36 HSPs)
chr8 (305-381)||(34420847-34420923)
chr8 (310-349)||(43073453-43073492)
chr8 (311-355)||(1230672-1230716)
chr8 (305-349)||(3456838-3456882)
chr8 (305-349)||(3650520-3650564)
chr8 (305-381)||(6038260-6038336)
chr8 (305-381)||(29376901-29376977)
chr8 (305-349)||(44293575-44293619)
chr8 (305-348)||(13272540-13272583)
chr8 (310-349)||(41603066-41603105)
chr8 (311-381)||(13284250-13284320)
chr8 (311-381)||(43778025-43778095)
chr8 (310-344)||(44037387-44037421)
chr8 (304-349)||(574383-574428)
chr8 (311-356)||(12959295-12959340)
chr8 (316-345)||(20469332-20469361)
chr8 (308-349)||(24202154-24202195)
chr8 (312-381)||(32944825-32944894)
chr8 (304-345)||(40795376-40795417)
chr8 (305-345)||(1877683-1877723)
chr8 (305-349)||(5830314-5830358)
chr8 (329-381)||(11603822-11603874)
chr8 (305-345)||(13286131-13286171)
chr8 (305-345)||(13357462-13357502)
chr8 (305-349)||(15188899-15188943)
chr8 (305-349)||(16823202-16823246)
chr8 (305-349)||(21557433-21557477)
chr8 (305-349)||(33373769-33373813)
chr8 (305-349)||(36588111-36588155)
chr8 (305-349)||(36919311-36919355)
chr8 (305-381)||(40316856-40316932)
chr8 (305-349)||(41388675-41388719)
chr8 (305-349)||(41625194-41625238)
chr8 (305-349)||(42060474-42060518)
chr8 (337-381)||(42688815-42688859)
chr8 (305-345)||(44019549-44019589)
[»] chr5 (37 HSPs)
chr5 (305-345)||(16579395-16579435)
chr5 (304-349)||(9123862-9123907)
chr5 (305-349)||(12909183-12909227)
chr5 (304-348)||(16188823-16188867)
chr5 (304-348)||(16188925-16188969)
chr5 (305-345)||(18589888-18589928)
chr5 (305-345)||(26034629-26034669)
chr5 (304-364)||(31602827-31602887)
chr5 (305-345)||(43462994-43463034)
chr5 (305-364)||(689547-689606)
chr5 (304-379)||(1538795-1538870)
chr5 (305-380)||(3389162-3389237)
chr5 (310-381)||(12159386-12159457)
chr5 (311-354)||(15105122-15105165)
chr5 (305-344)||(29667893-29667932)
chr5 (299-349)||(4763203-4763253)
chr5 (311-381)||(7713538-7713607)
chr5 (308-345)||(5246177-5246214)
chr5 (305-354)||(11647197-11647246)
chr5 (308-349)||(24443116-24443157)
chr5 (316-349)||(27079694-27079727)
chr5 (316-349)||(36162906-36162939)
chr5 (305-378)||(41650928-41651000)
chr5 (305-345)||(1669601-1669641)
chr5 (305-345)||(5107266-5107306)
chr5 (305-349)||(5614765-5614809)
chr5 (305-345)||(13864344-13864384)
chr5 (305-345)||(17046334-17046374)
chr5 (305-345)||(19248479-19248519)
chr5 (305-349)||(26409253-26409297)
chr5 (305-349)||(29695015-29695059)
chr5 (310-381)||(29962363-29962432)
chr5 (310-381)||(30012366-30012435)
chr5 (304-348)||(35413310-35413353)
chr5 (305-381)||(37614412-37614488)
chr5 (305-349)||(38370750-38370794)
chr5 (305-349)||(42515807-42515851)
[»] scaffold0122 (1 HSPs)
scaffold0122 (311-381)||(14171-14241)
[»] scaffold0350 (1 HSPs)
scaffold0350 (305-381)||(1248-1324)
[»] scaffold0027 (1 HSPs)
scaffold0027 (305-381)||(42725-42801)
[»] scaffold0182 (1 HSPs)
scaffold0182 (306-381)||(17756-17831)
[»] scaffold0118 (1 HSPs)
scaffold0118 (306-349)||(44419-44462)
[»] scaffold0308 (1 HSPs)
scaffold0308 (305-345)||(6842-6882)
[»] scaffold0197 (1 HSPs)
scaffold0197 (305-381)||(21740-21816)
[»] scaffold0062 (1 HSPs)
scaffold0062 (305-349)||(7474-7518)
[»] scaffold0009 (1 HSPs)
scaffold0009 (305-341)||(189616-189652)
[»] scaffold0008 (1 HSPs)
scaffold0008 (305-345)||(122891-122931)


Alignment Details
Target: chr4 (Bit Score: 255; Significance: 1e-141; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 255; E-Value: 1e-141
Query Start/End: Original strand, 15 - 292
Target Start/End: Complemental strand, 55015460 - 55015180
Alignment:
Q  15 aatagtagtagaagagtaattgtgagaaggttggcaaggaaaggtgagtatttgccccacaatatataacatgagtgatagtgaatgtggttgtgaatgg 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  55015460 aatagtagtagaagagtaattgtgagaaggttggcaaggaaaggtgagtatttgccccataatatataacatgagtgatagtgaatgtggttgtgaatgg 55015361  T
Q  115 tggttaattgcattcaataaaattgaacagacgtatttacttctaccaagtacggattgctacgcatcacgacagatattcaacgcatccatctgcatgt 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55015360 tggttaattgcattcaataaaattgaacagacgtatttacttctaccaagtacggattgctacgcatcacgacagatattcaacgcatccatctgcatgt 55015261  T
Q  215 gactttgaaaaatgctactact---actattttttataaattgtttagttccggtgtatatacgtgttacgtaaataagga 292  Q
    ||||||||||||||||||||||   ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  55015260 gactttgaaaaatgctactactactactattttttataaattgtttagttccagtgtatatacgtgttacgtaactaagga 55015180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 331 - 480
Target Start/End: Complemental strand, 55015178 - 55015020
Alignment:
Q  331 aatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaataagttttatacaagtagagtattatacataa-------atcattcatt 423  Q
    |||| ||||||||||||||||||||  ||||||  |||||||| ||| ||| |||||||||||||  |||||||| |||||||       ||||||||||    
T  55015178 aatgtataatatatgtaagttttgaggttcaaatttcgaccactacagaaagaagttttatacaaagagagtattgtacataagtcataaatcattcatt 55015079  T
Q  424 tgagtgttatat--tcacatactaaataccccaagaattgttgacttatgttatgtagt 480  Q
    ||||||||||||  ||| | |||||||||||||||||||||||||||||||||||||||    
T  55015078 tgagtgttatatattcagagactaaataccccaagaattgttgacttatgttatgtagt 55015020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 476 - 560
Target Start/End: Complemental strand, 55014711 - 55014627
Alignment:
Q  476 gtagtagtatttaatttctagactttataccccaagaaaacaagtatagttgactaatgctatgcagttgagtgttgagagtatt 560  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  55014711 gtagtattatttaatttctagactttatactccaagaaaacaagtatagttgactaatgcaatgcagttgagggttgagagtatt 55014627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 381
Target Start/End: Complemental strand, 34960213 - 34960142
Alignment:
Q  310 cttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    ||||||||||||||||||||||||||||||||||| |||| || ||  ||| |||  |||||||||||||||    
T  34960213 cttaactcagttggtataaacaatgcataatatatataagattcgaggttcgaaccccgaccaccacaaaaa 34960142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 345
Target Start/End: Complemental strand, 15170160 - 15170120
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  15170160 gtgaacttaactcagttggtatgaacaatgcataatatatg 15170120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 349
Target Start/End: Complemental strand, 32923291 - 32923247
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||    
T  32923291 gtgagcttaactcagttggtatgaacaatgcataatatatgtaag 32923247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 381
Target Start/End: Complemental strand, 40071029 - 40070953
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    |||| ||||||||||||||||| |||||||||||||||||| ||| |  ||| |||||||  |||||| ||||||||    
T  40071029 gtgagcttaactcagttggtatgaacaatgcataatatatgcaaggtccgaagttcaaaccccgaccatcacaaaaa 40070953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 305 - 354
Target Start/End: Original strand, 4916155 - 4916204
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaagttttg 354  Q
    ||||||||| |||||||||| | |||||||||||||||||||||| ||||    
T  4916155 gtgaacttagctcagttggtttgaacaatgcataatatatgtaagatttg 4916204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 304 - 344
Target Start/End: Original strand, 7282556 - 7282596
Alignment:
Q  304 tgtgaacttaactcagttggtataaacaatgcataatatat 344  Q
    |||||||||| |||||||||||| |||||||||||||||||    
T  7282556 tgtgaacttagctcagttggtatgaacaatgcataatatat 7282596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 345
Target Start/End: Original strand, 16451209 - 16451249
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    ||||||||||||||||||||| |||||||||||||| ||||    
T  16451209 gtgaacttaactcagttggtacaaacaatgcataatttatg 16451249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 304 - 348
Target Start/End: Original strand, 34968341 - 34968385
Alignment:
Q  304 tgtgaacttaactcagttggtataaacaatgcataatatatgtaa 348  Q
    ||||| |||||||||||||||| ||| ||||||||||||||||||    
T  34968341 tgtgagcttaactcagttggtaaaaataatgcataatatatgtaa 34968385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 373
Target Start/End: Complemental strand, 35050603 - 35050535
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccac 373  Q
    |||||||||| |||||||||||  |||||  |||||||||||||| |||||| |||||||  |||||||    
T  35050603 gtgaacttaattcagttggtatgtacaatttataatatatgtaaggtttgaagttcaaaccccgaccac 35050535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 313 - 381
Target Start/End: Original strand, 35305244 - 35305312
Alignment:
Q  313 aactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    |||||||||| || ||| |||||| |||||||| ||| |||||| |||||||  |||||||||||||||    
T  35305244 aactcagttgatagaaataatgcacaatatatgcaaggtttgaagttcaaaccccgaccaccacaaaaa 35305312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 381
Target Start/End: Complemental strand, 42344679 - 42344603
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    |||| ||||||||| ||||||  ||||||| |||||||||| ||| |  ||  ||||||||||||||||||||||||    
T  42344679 gtgaccttaactcaattggtaggaacaatgtataatatatgcaaggtccgaggttcaaacatcgaccaccacaaaaa 42344603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 345
Target Start/End: Complemental strand, 45970768 - 45970728
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    |||| |||||||||||||||| |||||||||||||||||||    
T  45970768 gtgagcttaactcagttggtagaaacaatgcataatatatg 45970728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 308 - 344
Target Start/End: Complemental strand, 47537504 - 47537468
Alignment:
Q  308 aacttaactcagttggtataaacaatgcataatatat 344  Q
    |||||||||||||||||||||||||||||||| ||||    
T  47537504 aacttaactcagttggtataaacaatgcataaaatat 47537468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 349
Target Start/End: Complemental strand, 50380897 - 50380853
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    |||| ||||| ||||||||||| ||||||||||||||||||||||    
T  50380897 gtgagcttaattcagttggtatgaacaatgcataatatatgtaag 50380853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 349
Target Start/End: Original strand, 50668340 - 50668384
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    |||||||||| ||||||||||| |||||| |||||||||||||||    
T  50668340 gtgaacttaattcagttggtatgaacaatacataatatatgtaag 50668384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 304 - 364
Target Start/End: Original strand, 52936640 - 52936700
Alignment:
Q  304 tgtgaacttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaac 364  Q
    ||||| ||||||||||||| || |||||||| |||||||||||||| |||||  |||||||    
T  52936640 tgtgagcttaactcagttgatagaaacaatgtataatatatgtaaggtttgaggttcaaac 52936700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 349
Target Start/End: Original strand, 37422196 - 37422235
Alignment:
Q  310 cttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    ||||||||||||||||| ||||||||||||||| ||||||    
T  37422196 cttaactcagttggtattaacaatgcataatatgtgtaag 37422235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 348
Target Start/End: Complemental strand, 37970235 - 37970192
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaa 348  Q
    |||||||||| |||||||||||||| |||| |||||||||||||    
T  37970235 gtgaacttaattcagttggtataaaaaatgtataatatatgtaa 37970192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 306 - 345
Target Start/End: Complemental strand, 42198636 - 42198597
Alignment:
Q  306 tgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    |||||||| ||||||||||||||||||||||||| |||||    
T  42198636 tgaacttagctcagttggtataaacaatgcataaaatatg 42198597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 306 - 345
Target Start/End: Original strand, 44689493 - 44689532
Alignment:
Q  306 tgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    ||||||||||||||||||||  ||||||||||||||||||    
T  44689493 tgaacttaactcagttggtaagaacaatgcataatatatg 44689532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 306 - 345
Target Start/End: Complemental strand, 46409541 - 46409502
Alignment:
Q  306 tgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    |||||||||||||||||||| | |||||||||||||||||    
T  46409541 tgaacttaactcagttggtaaagacaatgcataatatatg 46409502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 311 - 381
Target Start/End: Complemental strand, 3782420 - 3782350
Alignment:
Q  311 ttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    |||| |||| ||||||  ||||||||||||||||||||| | |  | ||| ||||||||||||||||||||    
T  3782420 ttaagtcagctggtattcacaatgcataatatatgtaagatctagagttcgaacatcgaccaccacaaaaa 3782350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 305 - 347
Target Start/End: Complemental strand, 13984703 - 13984661
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgta 347  Q
    |||| ||||||||||||||||  ||||||||||||||||||||    
T  13984703 gtgagcttaactcagttggtaggaacaatgcataatatatgta 13984661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 311 - 349
Target Start/End: Original strand, 21935018 - 21935056
Alignment:
Q  311 ttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    ||||||||||||||||| |||||||||||| ||||||||    
T  21935018 ttaactcagttggtatagacaatgcataatgtatgtaag 21935056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 311 - 349
Target Start/End: Original strand, 43722771 - 43722809
Alignment:
Q  311 ttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    ||||||||||||||||  |||||||||||||||||||||    
T  43722771 ttaactcagttggtatggacaatgcataatatatgtaag 43722809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 305 - 355
Target Start/End: Original strand, 51002287 - 51002337
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaagttttga 355  Q
    |||| |||||||||||||||||| ||||||||||| ||||| ||| |||||    
T  51002287 gtgagcttaactcagttggtatagacaatgcataaaatatgcaaggtttga 51002337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 3299149 - 3299096
Alignment:
Q  311 ttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaac 364  Q
    ||||||||||||||  ||||||||||||||||||| ||| |||||  |||||||    
T  3299149 ttaactcagttggttaaaacaatgcataatatatgcaaggtttgaggttcaaac 3299096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 345
Target Start/End: Original strand, 3936626 - 3936667
Alignment:
Q  304 tgtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    ||||| |||| |||||||||||| ||||||||||||||||||    
T  3936626 tgtgagcttagctcagttggtatgaacaatgcataatatatg 3936667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 350
Target Start/End: Original strand, 10351825 - 10351870
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaagt 350  Q
    ||||||| |||||| ||||||| ||||||| |||||||||||||||    
T  10351825 gtgaactaaactcaattggtatgaacaatgtataatatatgtaagt 10351870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 376
Target Start/End: Complemental strand, 17948183 - 17948126
Alignment:
Q  319 gttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccac 376  Q
    ||||||||||||||||||||| ||||||||| || | | |||||||  ||||||||||    
T  17948183 gttggtataaacaatgcataaaatatgtaaggttcggagttcaaaccccgaccaccac 17948126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 381
Target Start/End: Original strand, 47266163 - 47266228
Alignment:
Q  316 tcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    |||||||||||| |||||| |||||||||||||| | |   ||||||||  |||||||||||||||    
T  47266163 tcagttggtatagacaatgtataatatatgtaaggtctaggattcaaaccccgaccaccacaaaaa 47266228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 349
Target Start/End: Original strand, 47704581 - 47704626
Alignment:
Q  304 tgtgaacttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    ||||| ||||||||||||||||| || |||| ||||||||||||||    
T  47704581 tgtgagcttaactcagttggtatgaataatgtataatatatgtaag 47704626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 349
Target Start/End: Complemental strand, 6459985 - 6459941
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    |||| ||||||||||||| |||  |||||||||||||||||||||    
T  6459985 gtgagcttaactcagttgatatggacaatgcataatatatgtaag 6459941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 345
Target Start/End: Complemental strand, 7030954 - 7030914
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    |||| |||||||||||||||||| ||||||||||| |||||    
T  7030954 gtgagcttaactcagttggtatagacaatgcataaaatatg 7030914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 345
Target Start/End: Complemental strand, 10069149 - 10069109
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    ||||||||| |||||||||||| ||||||| ||||||||||    
T  10069149 gtgaacttagctcagttggtatgaacaatgtataatatatg 10069109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 381
Target Start/End: Original strand, 10082402 - 10082478
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    ||||||||| |||||||||||   ||||| ||||||||||  ||| | |||  ||||||| ||||||||||||||||    
T  10082402 gtgaacttagctcagttggtagggacaatacataatatatacaagatatgaggttcaaacctcgaccaccacaaaaa 10082478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 320 - 364
Target Start/End: Complemental strand, 12192537 - 12192493
Alignment:
Q  320 ttggtataaacaatgcataatatatgtaagttttgaaattcaaac 364  Q
    ||||||| |||||||||||||||||| ||| ||||| ||||||||    
T  12192537 ttggtatgaacaatgcataatatatgcaaggtttgagattcaaac 12192493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 381
Target Start/End: Original strand, 17729426 - 17729502
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    ||||||||| |||||||||||| |||  ||||||||||||| ||| | ||   |||||||  |||||||||||||||    
T  17729426 gtgaacttagctcagttggtatgaaccttgcataatatatgcaaggtctggggttcaaaccccgaccaccacaaaaa 17729502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 301 - 345
Target Start/End: Original strand, 20383484 - 20383528
Alignment:
Q  301 tcatgtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    |||||||| |||| ||||||||||||  |||||||||||||||||    
T  20383484 tcatgtgagcttagctcagttggtatggacaatgcataatatatg 20383528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 345
Target Start/End: Original strand, 23225865 - 23225905
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    |||||||||||||||||||||  |||||| |||||||||||    
T  23225865 gtgaacttaactcagttggtaggaacaattcataatatatg 23225905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 345
Target Start/End: Original strand, 28751211 - 28751251
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    |||| |||||||||||| ||||||||||| |||||||||||    
T  28751211 gtgagcttaactcagttagtataaacaatacataatatatg 28751251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 381
Target Start/End: Original strand, 29908056 - 29908132
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    |||| ||||||||||||||||   ||||||||||||||||| ||| |  | | ||||||| |||| |||||||||||    
T  29908056 gtgagcttaactcagttggtaaggacaatgcataatatatgcaaggtccggagttcaaacctcgatcaccacaaaaa 29908132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 381
Target Start/End: Complemental strand, 31879938 - 31879863
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    |||| |||||||||||||  ||  ||||||||||||||||| |||||| |  |||||||| ||| ||||||||||||    
T  31879938 gtgagcttaactcagttgtaatggacaatgcataatatatgcaagtttcg-gattcaaacctcggccaccacaaaaa 31879863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 349
Target Start/End: Original strand, 40160798 - 40160842
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    |||| ||||| |||||||||||| |||| ||||||||||||||||    
T  40160798 gtgagcttaattcagttggtatagacaacgcataatatatgtaag 40160842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 345
Target Start/End: Complemental strand, 43034403 - 43034363
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    |||| |||||||||||||||||  |||||||||||||||||    
T  43034403 gtgagcttaactcagttggtatggacaatgcataatatatg 43034363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 349
Target Start/End: Original strand, 44383448 - 44383492
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    ||||||||| |||||||||||||||||||  |||| |||||||||    
T  44383448 gtgaacttagctcagttggtataaacaatatataaaatatgtaag 44383492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 341
Target Start/End: Original strand, 44572591 - 44572627
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataata 341  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  44572591 gtgaacttaactcagttagtagaaacaatgcataata 44572627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 329 - 381
Target Start/End: Complemental strand, 46434797 - 46434745
Alignment:
Q  329 acaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    ||||||||||||||||||||| |||||  |||||||  ||| |||||||||||    
T  46434797 acaatgcataatatatgtaaggtttgaggttcaaactccgatcaccacaaaaa 46434745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 345
Target Start/End: Complemental strand, 51436667 - 51436627
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    |||||||||||||||||| ||  ||||||||||||||||||    
T  51436667 gtgaacttaactcagttgatacgaacaatgcataatatatg 51436627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 349
Target Start/End: Original strand, 51465337 - 51465381
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    |||| ||||| |||||||||||  |||||||||||||||||||||    
T  51465337 gtgagcttaattcagttggtatggacaatgcataatatatgtaag 51465381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 349
Target Start/End: Original strand, 53530009 - 53530053
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    |||| ||||||||||||  || |||||||||||||||||||||||    
T  53530009 gtgagcttaactcagttaataaaaacaatgcataatatatgtaag 53530053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 349
Target Start/End: Original strand, 54500569 - 54500613
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    |||| |||| ||||||||||| | |||||||||||||||||||||    
T  54500569 gtgagcttagctcagttggtagagacaatgcataatatatgtaag 54500613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 345
Target Start/End: Original strand, 55922407 - 55922447
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    ||||||||||||||||||||||  ||||||| |||||||||    
T  55922407 gtgaacttaactcagttggtattgacaatgcttaatatatg 55922447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 315 - 381
Target Start/End: Original strand, 32632331 - 32632397
Alignment:
Q  315 ctcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    ||||||||||||||||||||||||||||||||||  |||| | |||||||  |||||||||||||||    
T  32632331 ctcagttggtataaacaatgcataatatatgtaaaatttggagttcaaaccccgaccaccacaaaaa 32632397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 310 - 381
Target Start/End: Original strand, 10840423 - 10840493
Alignment:
Q  310 cttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    |||| |||||||||||| |||||||||||||||||| ||| |||| | ||||||| |||||||||| |||||    
T  10840423 cttagctcagttggtatgaacaatgcataatatatg-aaggtttggagttcaaacttcgaccaccataaaaa 10840493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 304 - 355
Target Start/End: Complemental strand, 43630480 - 43630429
Alignment:
Q  304 tgtgaacttaactcagttggtataaacaatgcataatatatgtaagttttga 355  Q
    |||||| |||||||| ||||||| |||||||||||||||||||||| |||||    
T  43630480 tgtgaagttaactcaattggtatgaacaatgcataatatatgtaaggtttga 43630429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 305 - 354
Target Start/End: Original strand, 2078240 - 2078289
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaagttttg 354  Q
    ||||||||||||||||||||| | ||||||||||||||||| ||| ||||    
T  2078240 gtgaacttaactcagttggtagagacaatgcataatatatgcaaggtttg 2078289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 304 - 349
Target Start/End: Complemental strand, 25289375 - 25289330
Alignment:
Q  304 tgtgaacttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    |||||||||| ||||||||||| |||||||| ||||||||||||||    
T  25289375 tgtgaacttagctcagttggtaaaaacaatgtataatatatgtaag 25289330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 349
Target Start/End: Complemental strand, 2186488 - 2186444
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    ||||||||||||||||||||||  ||||| |||||||||||||||    
T  2186488 gtgaacttaactcagttggtatggacaatacataatatatgtaag 2186444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 345
Target Start/End: Complemental strand, 5941355 - 5941315
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    |||| ||||||||||||||||| ||||||||||||||||||    
T  5941355 gtgagcttaactcagttggtatgaacaatgcataatatatg 5941315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 345
Target Start/End: Original strand, 8942017 - 8942057
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    |||| ||||||||||||||||| ||||||||||||||||||    
T  8942017 gtgagcttaactcagttggtatgaacaatgcataatatatg 8942057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 349
Target Start/End: Original strand, 27432234 - 27432278
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    |||||||||||| |||||||||  |||||||||||||||||||||    
T  27432234 gtgaacttaacttagttggtatgtacaatgcataatatatgtaag 27432278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 349
Target Start/End: Complemental strand, 33633379 - 33633335
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    |||| |||||||||||| ||||| |||||||||||||||||||||    
T  33633379 gtgagcttaactcagttagtatagacaatgcataatatatgtaag 33633335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 381
Target Start/End: Complemental strand, 45309204 - 45309128
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    |||| ||||||||||||||||||||||||  |||||||||  ||| |||||  ||| ||| ||| ||||||||||||    
T  45309204 gtgagcttaactcagttggtataaacaatttataatatatacaaggtttgaggttcgaacttcggccaccacaaaaa 45309128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 306 - 345
Target Start/End: Complemental strand, 41834590 - 41834551
Alignment:
Q  306 tgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    |||||||||||||| || ||||||||||||||||||||||    
T  41834590 tgaacttaactcagatgatataaacaatgcataatatatg 41834551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 381
Target Start/End: Complemental strand, 53438760 - 53438680
Alignment:
Q  305 gtgaacttaactca----gttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    ||||||||||||||    |||||||  ||||||| |||||||||||||| |||||  ||||||| ||||||||||| ||||    
T  53438760 gtgaacttaactcaattggttggtaagaacaatgtataatatatgtaagatttgagtttcaaacttcgaccaccaccaaaa 53438680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 311 - 381
Target Start/End: Original strand, 7829902 - 7829972
Alignment:
Q  311 ttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    |||||||||||| |||  ||||||||||||||||||||| | |||| ||| ||   |||||||||||||||    
T  7829902 ttaactcagttgatatggacaatgcataatatatgtaaggtctgaagttcgaaatccgaccaccacaaaaa 7829972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 305 - 347
Target Start/End: Original strand, 23332650 - 23332692
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgta 347  Q
    |||||||||||| ||||| ||| ||||||||||||||||||||    
T  23332650 gtgaacttaacttagttgatatgaacaatgcataatatatgta 23332692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 305 - 343
Target Start/End: Original strand, 32303360 - 32303398
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatata 343  Q
    |||||| ||||||||||||||| ||||||||||||||||    
T  32303360 gtgaacgtaactcagttggtatgaacaatgcataatata 32303398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 311 - 381
Target Start/End: Original strand, 33634504 - 33634574
Alignment:
Q  311 ttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    |||||| |||||||||||| |||  |||||||||||||| || |   ||||||||||| ||||||||||||    
T  33634504 ttaacttagttggtataaataatatataatatatgtaaggttcggggttcaaacatcggccaccacaaaaa 33634574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 311 - 349
Target Start/End: Original strand, 46903914 - 46903952
Alignment:
Q  311 ttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    ||||||||||||||||  |||||||||||||||||||||    
T  46903914 ttaactcagttggtatggacaatgcataatatatgtaag 46903952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 296 - 381
Target Start/End: Complemental strand, 47377420 - 47377334
Alignment:
Q  296 aagtgtcat-gtgaacttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    ||||||||| |||| ||||||||||||||||   ||||||||||||||||  ||| || ||  ||||||||| | ||||||||||||    
T  47377420 aagtgtcatcgtgagcttaactcagttggtaaggacaatgcataatatatacaaggttcgaggttcaaacattggccaccacaaaaa 47377334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 305 - 355
Target Start/End: Original strand, 48688115 - 48688164
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaagttttga 355  Q
    ||||||||| |||||||||||| | |||||||||||||||||||| |||||    
T  48688115 gtgaacttagctcagttggtatga-caatgcataatatatgtaaggtttga 48688164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 354
Target Start/End: Original strand, 18737108 - 18737157
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaagttttg 354  Q
    |||| ||||||| ||||| |||||| ||||||||||||||||||| ||||    
T  18737108 gtgagcttaacttagttgatataaagaatgcataatatatgtaagatttg 18737157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 345
Target Start/End: Original strand, 19468450 - 19468491
Alignment:
Q  304 tgtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    ||||| |||||||||||||||||  |||||||||||||||||    
T  19468450 tgtgagcttaactcagttggtatggacaatgcataatatatg 19468491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 354
Target Start/End: Original strand, 22486683 - 22486732
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaagttttg 354  Q
    |||| ||||||||||||||||  |||||||||||||||||| ||| ||||    
T  22486683 gtgagcttaactcagttggtaagaacaatgcataatatatgcaagatttg 22486732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 345
Target Start/End: Complemental strand, 25441562 - 25441521
Alignment:
Q  304 tgtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    |||||||||| ||||||||||||  |||||||||||||||||    
T  25441562 tgtgaacttagctcagttggtatggacaatgcataatatatg 25441521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 349
Target Start/End: Original strand, 30696728 - 30696765
Alignment:
Q  312 taactcagttggtataaacaatgcataatatatgtaag 349  Q
    |||||||||||||||||||||||||| ||||| |||||    
T  30696728 taactcagttggtataaacaatgcatgatataggtaag 30696765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 345
Target Start/End: Complemental strand, 38131021 - 38130980
Alignment:
Q  304 tgtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    ||||| |||||||||||||||||  |||||||||||||||||    
T  38131021 tgtgagcttaactcagttggtatggacaatgcataatatatg 38130980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 349
Target Start/End: Complemental strand, 38559950 - 38559913
Alignment:
Q  312 taactcagttggtataaacaatgcataatatatgtaag 349  Q
    ||||||||||||||| ||||||||||||||||| ||||    
T  38559950 taactcagttggtatgaacaatgcataatatatataag 38559913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 315 - 348
Target Start/End: Original strand, 53852745 - 53852778
Alignment:
Q  315 ctcagttggtataaacaatgcataatatatgtaa 348  Q
    ||||||||| ||||||||||||||||||||||||    
T  53852745 ctcagttggcataaacaatgcataatatatgtaa 53852778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 345
Target Start/End: Complemental strand, 1757730 - 1757690
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    |||| ||||||||||||||||  ||||||||||||||||||    
T  1757730 gtgagcttaactcagttggtaggaacaatgcataatatatg 1757690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 345
Target Start/End: Complemental strand, 2105759 - 2105719
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    ||||||||||||||||||||| ||| |||| ||||||||||    
T  2105759 gtgaacttaactcagttggtaaaaataatgtataatatatg 2105719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 381
Target Start/End: Original strand, 7300772 - 7300848
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    ||||||||||||||||| ||||| ||||  ||||||||||| ||| || |  |||| |||  |||||||||||||||    
T  7300772 gtgaacttaactcagttagtatagacaaaacataatatatgcaaggttcgggattcgaaccccgaccaccacaaaaa 7300848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 349
Target Start/End: Complemental strand, 7464552 - 7464508
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    |||| ||||||||||||||||   |||||||||||||||||||||    
T  7464552 gtgagcttaactcagttggtagggacaatgcataatatatgtaag 7464508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 349
Target Start/End: Original strand, 21160052 - 21160096
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    |||||||||||||||||| |||  | |||||||||||||||||||    
T  21160052 gtgaacttaactcagttgatatggataatgcataatatatgtaag 21160096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 345
Target Start/End: Complemental strand, 28244165 - 28244125
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    |||| ||||||||||||||||| |||||||||||| |||||    
T  28244165 gtgagcttaactcagttggtatgaacaatgcataaaatatg 28244125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 311 - 355
Target Start/End: Original strand, 29791782 - 29791826
Alignment:
Q  311 ttaactcagttggtataaacaatgcataatatatgtaagttttga 355  Q
    |||||||||||| || ||||||| ||||||||||||||| |||||    
T  29791782 ttaactcagttgatagaaacaatacataatatatgtaaggtttga 29791826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 345
Target Start/End: Original strand, 33223868 - 33223908
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    |||| |||| ||||||||||| |||||||||||||||||||    
T  33223868 gtgagcttagctcagttggtagaaacaatgcataatatatg 33223908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 345
Target Start/End: Complemental strand, 34326044 - 34326004
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    |||||||||| |||||||||||  |||||||||||||||||    
T  34326044 gtgaacttaattcagttggtatggacaatgcataatatatg 34326004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 349
Target Start/End: Original strand, 35355612 - 35355656
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    ||||||||||||||||| |||  ||||||||||| ||||||||||    
T  35355612 gtgaacttaactcagttagtaggaacaatgcatagtatatgtaag 35355656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 329 - 381
Target Start/End: Complemental strand, 37887968 - 37887916
Alignment:
Q  329 acaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    ||||||||||||||||||||| ||||  |||| ||||  ||||||||||||||    
T  37887968 acaatgcataatatatgtaaggtttgggattcgaacactgaccaccacaaaaa 37887916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 345
Target Start/End: Complemental strand, 43490478 - 43490438
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    |||| |||| |||||||||||| ||||||||||||||||||    
T  43490478 gtgagcttagctcagttggtatgaacaatgcataatatatg 43490438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 315 - 355
Target Start/End: Original strand, 49088762 - 49088802
Alignment:
Q  315 ctcagttggtataaacaatgcataatatatgtaagttttga 355  Q
    |||||||| |||||||||||||||| ||||||||| |||||    
T  49088762 ctcagttgatataaacaatgcataaaatatgtaaggtttga 49088802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 345
Target Start/End: Complemental strand, 51882261 - 51882221
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    |||| |||||||||||||||||  |||||||||||||||||    
T  51882261 gtgagcttaactcagttggtatggacaatgcataatatatg 51882221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 309 - 349
Target Start/End: Complemental strand, 55010157 - 55010117
Alignment:
Q  309 acttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    ||||||||||||||||||| ||||| |||||||||| ||||    
T  55010157 acttaactcagttggtatagacaatacataatatatctaag 55010117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 305 - 381
Target Start/End: Complemental strand, 32950822 - 32950746
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    |||| |||||||||||||||||||||||||||||||||||| ||| |  | | ||||||| ||||||||||| ||||    
T  32950822 gtgagcttaactcagttggtataaacaatgcataatatatgcaaggtccggagttcaaacctcgaccaccaccaaaa 32950746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 311 - 380
Target Start/End: Original strand, 46082342 - 46082411
Alignment:
Q  311 ttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaa 380  Q
    ||||||||||||  |  |||||||||||||||||||||| |||| ||||||||||  |||||||||||||    
T  46082342 ttaactcagttgaaaggaacaatgcataatatatgtaaggtttggaattcaaacactgaccaccacaaaa 46082411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 305 - 372
Target Start/End: Complemental strand, 4806856 - 4806789
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgacca 372  Q
    |||||||||| |||||||||| | |||||| |||||||||||||| |||||  ||||||| |||||||    
T  4806856 gtgaacttaattcagttggtagagacaatgtataatatatgtaaggtttgaggttcaaacctcgacca 4806789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 311 - 354
Target Start/End: Original strand, 8153141 - 8153184
Alignment:
Q  311 ttaactcagttggtataaacaatgcataatatatgtaagttttg 354  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||    
T  8153141 ttaactcagttggtatagacaatgcataatatatgtaagatttg 8153184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 304 - 379
Target Start/End: Complemental strand, 28832233 - 28832158
Alignment:
Q  304 tgtgaacttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaa 379  Q
    ||||| ||||||||||||||||| |||||||||||||||||| ||| | |||  ||||||   |||||||||||||    
T  28832233 tgtgagcttaactcagttggtatgaacaatgcataatatatgcaaggtctgaggttcaaatcccgaccaccacaaa 28832158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 355
Target Start/End: Complemental strand, 3573385 - 3573335
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaagttttga 355  Q
    |||| ||||||||||||||||  |||||||||||||||||||||| |||||    
T  3573385 gtgagcttaactcagttggtaggaacaatgcataatatatgtaaggtttga 3573335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 359
Target Start/End: Complemental strand, 41182667 - 41182613
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaagttttgaaatt 359  Q
    |||| ||||||||||||||||| || |||||||||||| |||||| |||||||||    
T  41182667 gtgagcttaactcagttggtatgaataatgcataatatgtgtaagatttgaaatt 41182613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 299 - 364
Target Start/End: Original strand, 10841894 - 10841959
Alignment:
Q  299 tgtcatgtgaacttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaac 364  Q
    |||| ||||| ||||||||||||| |||  |||||||||||||||| |||| ||||| ||||||||    
T  10841894 tgtcttgtgagcttaactcagttgatatggacaatgcataatatatataaggtttgagattcaaac 10841959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 381
Target Start/End: Original strand, 16924478 - 16924554
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    |||| ||||||||||| |||  | ||||| ||||||||||||||| ||||   ||||||| ||||||||||||||||    
T  16924478 gtgagcttaactcagtcggtggagacaatacataatatatgtaagatttggggttcaaacctcgaccaccacaaaaa 16924554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 306 - 349
Target Start/End: Original strand, 3248778 - 3248821
Alignment:
Q  306 tgaacttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    ||||||||||| |||||||||  |||||||||||||||||||||    
T  3248778 tgaacttaacttagttggtatggacaatgcataatatatgtaag 3248821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 344
Target Start/End: Original strand, 27853355 - 27853394
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatat 344  Q
    |||| ||||||||||||||||| |||||||||||||||||    
T  27853355 gtgagcttaactcagttggtatgaacaatgcataatatat 27853394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 381
Target Start/End: Complemental strand, 52262222 - 52262151
Alignment:
Q  310 cttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    ||||||||||||||||| |||||||||||| ||||| ||  || ||  |||||||  |||||||||||||||    
T  52262222 cttaactcagttggtatgaacaatgcataaaatatgcaaagttcgaggttcaaactccgaccaccacaaaaa 52262151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 310 - 344
Target Start/End: Original strand, 14392 - 14426
Alignment:
Q  310 cttaactcagttggtataaacaatgcataatatat 344  Q
    |||| ||||||||||||||||||||||||||||||    
T  14392 cttagctcagttggtataaacaatgcataatatat 14426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 305 - 351
Target Start/End: Original strand, 49843434 - 49843480
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaagtt 351  Q
    |||| ||||||||| ||||| | ||||||||||||||||||||||||    
T  49843434 gtgagcttaactcaattggtttgaacaatgcataatatatgtaagtt 49843480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 311 - 381
Target Start/End: Original strand, 51046148 - 51046218
Alignment:
Q  311 ttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    |||||||||||||||| |||||| ||||| ||||||||| || | | ||| |||  |||||||||||||||    
T  51046148 ttaactcagttggtatgaacaatacataaaatatgtaaggttcggagttcgaactccgaccaccacaaaaa 51046218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 296 - 381
Target Start/End: Original strand, 51988771 - 51988857
Alignment:
Q  296 aagtgtcat-gtgaacttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    ||||||||| ||||||||||| |||||||||  ||||||||| |||||| ||||| || |  |||||||  ||||||||||| ||||    
T  51988771 aagtgtcatcgtgaacttaacacagttggtaggaacaatgcacaatataggtaagattcgggattcaaatctcgaccaccacgaaaa 51988857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 381
Target Start/End: Complemental strand, 7454640 - 7454563
Alignment:
Q  304 tgtgaacttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    ||||||||||||||| |||||||  |||||| |||||||||| ||| ||    ||||||||  |||||||||||||||    
T  7454640 tgtgaacttaactcaattggtatcgacaatgtataatatatgcaaggttcatgattcaaaccccgaccaccacaaaaa 7454563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 381
Target Start/End: Complemental strand, 9265898 - 9265821
Alignment:
Q  304 tgtgaacttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    |||||||||||||||||||||||  |||||| |||||| ||| ||| | ||  ||||||||  || ||||||||||||    
T  9265898 tgtgaacttaactcagttggtatggacaatgtataatacatgcaaggtctgggattcaaaccccggccaccacaaaaa 9265821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 349
Target Start/End: Original strand, 11410626 - 11410671
Alignment:
Q  304 tgtgaacttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    ||||| ||||||||||||||||| |||||| ||||| |||||||||    
T  11410626 tgtgagcttaactcagttggtatgaacaatacataaaatatgtaag 11410671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 346
Target Start/End: Original strand, 15729430 - 15729471
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgt 346  Q
    |||| |||||||||||||||| | ||||||||||||||||||    
T  15729430 gtgagcttaactcagttggtagagacaatgcataatatatgt 15729471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 381
Target Start/End: Original strand, 32923829 - 32923894
Alignment:
Q  316 tcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    ||||||||||   ||||||||||||||||| ||| | |||| |||||||  |||||||||||||||    
T  32923829 tcagttggtagggacaatgcataatatatgaaaggtctgaagttcaaactccgaccaccacaaaaa 32923894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 349
Target Start/End: Complemental strand, 33153942 - 33153897
Alignment:
Q  304 tgtgaacttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    ||||| ||||||||||||||||   |||||||||||||||||||||    
T  33153942 tgtgagcttaactcagttggtagggacaatgcataatatatgtaag 33153897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 345
Target Start/End: Complemental strand, 33229744 - 33229703
Alignment:
Q  304 tgtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    ||||| ||||||||||||||||  ||||||||||||||||||    
T  33229744 tgtgagcttaactcagttggtaggaacaatgcataatatatg 33229703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 301 - 345
Target Start/End: Complemental strand, 619473 - 619429
Alignment:
Q  301 tcatgtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    |||||||| |||||||||||||||| | |||||| ||||||||||    
T  619473 tcatgtgagcttaactcagttggtagagacaatgtataatatatg 619429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 345
Target Start/End: Original strand, 1091179 - 1091219
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    |||| |||||||||||||||||| |||||||||||| ||||    
T  1091179 gtgagcttaactcagttggtatagacaatgcataatgtatg 1091219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 345
Target Start/End: Complemental strand, 3510002 - 3509962
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    ||||||||| ||||||||||||  |||||||||||||||||    
T  3510002 gtgaacttagctcagttggtatggacaatgcataatatatg 3509962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 345
Target Start/End: Complemental strand, 10356244 - 10356204
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    |||| |||||||||||||||||  |||||||||||||||||    
T  10356244 gtgagcttaactcagttggtatggacaatgcataatatatg 10356204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 304 - 376
Target Start/End: Original strand, 14969809 - 14969881
Alignment:
Q  304 tgtgaacttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccac 376  Q
    ||||||||||||||||||| ||||  |||||||||| ||||| |||   ||| ||||||||  ||||||||||    
T  14969809 tgtgaacttaactcagttgatataggcaatgcataaaatatgcaaggaatgagattcaaaccccgaccaccac 14969881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 345
Target Start/End: Complemental strand, 25365057 - 25365017
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    ||||| |||||||||||||||  ||||||||||||||||||    
T  25365057 gtgaatttaactcagttggtaagaacaatgcataatatatg 25365017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 345
Target Start/End: Complemental strand, 26803512 - 26803472
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    ||||||||| ||||||||||||  |||||||||||||||||    
T  26803512 gtgaacttagctcagttggtatggacaatgcataatatatg 26803472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 349
Target Start/End: Complemental strand, 30678874 - 30678830
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    |||| ||||||||||||||||   |||||||||||||||||||||    
T  30678874 gtgagcttaactcagttggtagggacaatgcataatatatgtaag 30678830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 345
Target Start/End: Original strand, 30795701 - 30795741
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    ||||||||| |||||||||||  ||||||||||||||||||    
T  30795701 gtgaacttagctcagttggtaagaacaatgcataatatatg 30795741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 310 - 354
Target Start/End: Original strand, 34083342 - 34083386
Alignment:
Q  310 cttaactcagttggtataaacaatgcataatatatgtaagttttg 354  Q
    |||||||||| |||||  |||||||||||||||||||||| ||||    
T  34083342 cttaactcagatggtaagaacaatgcataatatatgtaaggtttg 34083386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 349
Target Start/End: Complemental strand, 36371101 - 36371057
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    |||| |||| ||||||||||| | |||||||||||||||||||||    
T  36371101 gtgagcttagctcagttggtagagacaatgcataatatatgtaag 36371057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 341
Target Start/End: Original strand, 45774574 - 45774610
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataata 341  Q
    |||||||| |||||||||||||||||||| |||||||    
T  45774574 gtgaacttgactcagttggtataaacaatacataata 45774610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 377
Target Start/End: Complemental strand, 48681994 - 48681922
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccaca 377  Q
    |||| |||| |||||||||||| |||||||||||||||||| ||| || | |  ||||||  |||||||||||    
T  48681994 gtgagcttagctcagttggtatgaacaatgcataatatatgcaaggttcggagctcaaactccgaccaccaca 48681922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 349
Target Start/End: Complemental strand, 50849134 - 50849090
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    |||| ||||||||||||||||   |||||||||||||||||||||    
T  50849134 gtgagcttaactcagttggtaatgacaatgcataatatatgtaag 50849090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 345
Target Start/End: Complemental strand, 52441572 - 52441532
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    |||| |||| ||||||||||||| |||||||||||||||||    
T  52441572 gtgagcttagctcagttggtatagacaatgcataatatatg 52441532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 315 - 381
Target Start/End: Original strand, 3196570 - 3196636
Alignment:
Q  315 ctcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    |||||||| ||| |||||||||||||||||||||| || || |||||||  ||||||||||||||||    
T  3196570 ctcagttgatatgaacaatgcataatatatgtaaggttcgagattcaaatctcgaccaccacaaaaa 3196636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 349
Target Start/End: Complemental strand, 41682449 - 41682404
Alignment:
Q  304 tgtgaacttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||    
T  41682449 tgtgagcttaactcagttggtataaataatgcataatatatgtaag 41682404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 345
Target Start/End: Original strand, 13196700 - 13196740
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  13196700 gtgaacttaactcagttggtatgaacaatgcataatatatg 13196740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 381
Target Start/End: Complemental strand, 27412897 - 27412821
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    |||| |||||||||||||||| | ||||||||||||||||||||| | ||   |||||||  |||||||||||||||    
T  27412897 gtgagcttaactcagttggtagagacaatgcataatatatgtaaggtctgttgttcaaaccccgaccaccacaaaaa 27412821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 381
Target Start/End: Complemental strand, 31837997 - 31837921
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    |||||||||||||| |||||||  | |||| |||||||||||||| || |  |||||||| ||||||||||||||||    
T  31837997 gtgaacttaactcaattggtatggataatgtataatatatgtaaggttcgggattcaaacctcgaccaccacaaaaa 31837921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 345
Target Start/End: Original strand, 33966321 - 33966361
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  33966321 gtgaacttaactcagttggtatgaacaatgcataatatatg 33966361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 305 - 344
Target Start/End: Complemental strand, 19189805 - 19189766
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatat 344  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  19189805 gtgaacttaactcagttggtatgaacaatgcataatatat 19189766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 318 - 381
Target Start/End: Complemental strand, 38727562 - 38727499
Alignment:
Q  318 agttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    ||||||||  |||||||||||||||||| |||||||| |  ||||||||||||||||| |||||    
T  38727562 agttggtaggaacaatgcataatatatgcaagttttggagatcaaacatcgaccaccaaaaaaa 38727499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 347
Target Start/End: Original strand, 32458116 - 32458158
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgta 347  Q
    |||||||||||||||||||||| ||||||||| ||||||||||    
T  32458116 gtgaacttaactcagttggtatgaacaatgcacaatatatgta 32458158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 381
Target Start/End: Complemental strand, 41939143 - 41939093
Alignment:
Q  331 aatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    ||||||||||||||||||| ||||| ||||||||  |||||||||||||||    
T  41939143 aatgcataatatatgtaaggtttgagattcaaactccgaccaccacaaaaa 41939093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 304 - 349
Target Start/End: Complemental strand, 30799150 - 30799105
Alignment:
Q  304 tgtgaacttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    ||||||||||  |||||||||| |||||||||||||||||||||||    
T  30799150 tgtgaacttatttcagttggtagaaacaatgcataatatatgtaag 30799105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 308 - 345
Target Start/End: Original strand, 37984358 - 37984395
Alignment:
Q  308 aacttaactcagttggtataaacaatgcataatatatg 345  Q
    |||||| |||||||||||||||||||||||||||||||    
T  37984358 aacttagctcagttggtataaacaatgcataatatatg 37984395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 308 - 349
Target Start/End: Original strand, 41853368 - 41853409
Alignment:
Q  308 aacttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    |||||||||||| || ||||||||||||||||||||||||||    
T  41853368 aacttaactcagctgatataaacaatgcataatatatgtaag 41853409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 345
Target Start/End: Complemental strand, 39088860 - 39088820
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    ||||||||||||||||||||| | |||||||||||||||||    
T  39088860 gtgaacttaactcagttggtaaagacaatgcataatatatg 39088820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 381
Target Start/End: Complemental strand, 40967432 - 40967356
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    |||| ||||||||||||| ||   ||||||||||||||||| ||| |||||  ||||||| ||||||| ||||||||    
T  40967432 gtgagcttaactcagttgataaggacaatgcataatatatgcaaggtttgaggttcaaacctcgaccatcacaaaaa 40967356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 345
Target Start/End: Complemental strand, 42475171 - 42475131
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    |||| |||||||||||||||||||||||||||||| |||||    
T  42475171 gtgagcttaactcagttggtataaacaatgcataaaatatg 42475131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 345
Target Start/End: Original strand, 44694688 - 44694728
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    |||||||||||||||||| |||| |||||||||||||||||    
T  44694688 gtgaacttaactcagttgatatagacaatgcataatatatg 44694728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 306 - 381
Target Start/End: Complemental strand, 29872232 - 29872157
Alignment:
Q  306 tgaacttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    ||||||||  ||||||||||| |||||| ||||||||||| ||| | | |  ||||||| ||||||||||||||||    
T  29872232 tgaacttagttcagttggtatgaacaatacataatatatgcaaggtctaaggttcaaacctcgaccaccacaaaaa 29872157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 381
Target Start/End: Original strand, 40661785 - 40661856
Alignment:
Q  310 cttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    ||||||||||||||| | || |||||||| |||||||||| ||| | |||||||| |||  |||||||||||    
T  40661785 cttaactcagttggtttgaataatgcatagtatatgtaaggtttcagattcaaacttcggtcaccacaaaaa 40661856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 311 - 349
Target Start/End: Complemental strand, 145066 - 145028
Alignment:
Q  311 ttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    ||||||||||||||||  |||||||||||||||||||||    
T  145066 ttaactcagttggtatggacaatgcataatatatgtaag 145028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 311 - 349
Target Start/End: Original strand, 14364060 - 14364098
Alignment:
Q  311 ttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    ||||||||||||||||  |||||||||||||||||||||    
T  14364060 ttaactcagttggtatggacaatgcataatatatgtaag 14364098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 311 - 349
Target Start/End: Original strand, 24548123 - 24548161
Alignment:
Q  311 ttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    |||||||| |||||||| |||||||||||||||||||||    
T  24548123 ttaactcaattggtatagacaatgcataatatatgtaag 24548161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 334 - 380
Target Start/End: Original strand, 29949094 - 29949140
Alignment:
Q  334 gcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaa 380  Q
    |||||||||||||||| | |||| ||||||| |||||||||||||||    
T  29949094 gcataatatatgtaaggtatgaagttcaaacctcgaccaccacaaaa 29949140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 319 - 381
Target Start/End: Complemental strand, 32957590 - 32957528
Alignment:
Q  319 gttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    |||||||| |||||||||||||||||||||| ||||   || |||| ||| ||||||||||||    
T  32957590 gttggtatgaacaatgcataatatatgtaaggtttggggtttaaacctcggccaccacaaaaa 32957528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 381
Target Start/End: Original strand, 7294739 - 7294812
Alignment:
Q  308 aacttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    |||||||||||||||||||| | ||||||||| |||| |||| ||||   |||||||  ||||||||| |||||    
T  7294739 aacttaactcagttggtatagataatgcataaaatatataaggtttgcggttcaaaccccgaccaccaaaaaaa 7294812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 345
Target Start/End: Complemental strand, 23250382 - 23250341
Alignment:
Q  304 tgtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    ||||| ||||||||||||||||  ||||||||||||||||||    
T  23250382 tgtgagcttaactcagttggtaagaacaatgcataatatatg 23250341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 354
Target Start/End: Original strand, 35727437 - 35727486
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaagttttg 354  Q
    |||| ||||||||||||||||  |||||||||||||||||| ||| ||||    
T  35727437 gtgagcttaactcagttggtaagaacaatgcataatatatgcaaggtttg 35727486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 345
Target Start/End: Complemental strand, 38443580 - 38443539
Alignment:
Q  304 tgtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    ||||| |||||||||||| |||| ||||||||||||||||||    
T  38443580 tgtgagcttaactcagttcgtatgaacaatgcataatatatg 38443539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 349
Target Start/End: Complemental strand, 41672334 - 41672301
Alignment:
Q  316 tcagttggtataaacaatgcataatatatgtaag 349  Q
    |||||||||||||||||||||||| |||||||||    
T  41672334 tcagttggtataaacaatgcataaaatatgtaag 41672301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 345
Target Start/End: Original strand, 2256971 - 2257011
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    |||| |||||||||||||||||  |||||||||||||||||    
T  2256971 gtgagcttaactcagttggtatggacaatgcataatatatg 2257011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 349
Target Start/End: Complemental strand, 8761625 - 8761581
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    |||| |||||||||||||||||  ||||| |||||||||||||||    
T  8761625 gtgagcttaactcagttggtatggacaatacataatatatgtaag 8761581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 349
Target Start/End: Original strand, 17736793 - 17736837
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    |||| |||| |||||||||||| |||||||||||| |||||||||    
T  17736793 gtgagcttagctcagttggtatgaacaatgcataaaatatgtaag 17736837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 349
Target Start/End: Complemental strand, 17842773 - 17842729
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    |||||||||||| ||||| ||  ||||||||||||||||||||||    
T  17842773 gtgaacttaacttagttgataagaacaatgcataatatatgtaag 17842729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 310 - 370
Target Start/End: Original strand, 19549441 - 19549501
Alignment:
Q  310 cttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgac 370  Q
    |||||||||| |||||| |||||||||||||||||| ||| | ||| |||| ||| |||||    
T  19549441 cttaactcagctggtatgaacaatgcataatatatgcaaggtctgagattcgaacctcgac 19549501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 315 - 351
Target Start/End: Original strand, 20517032 - 20517068
Alignment:
Q  315 ctcagttggtataaacaatgcataatatatgtaagtt 351  Q
    |||||||||||  ||||||||||||||||||||||||    
T  20517032 ctcagttggtaagaacaatgcataatatatgtaagtt 20517068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 381
Target Start/End: Original strand, 21497667 - 21497743
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    |||| |||||||| |||||||  |||||||||||||||||| ||| || ||  || |||| ||| ||||||||||||    
T  21497667 gtgagcttaactcggttggtaagaacaatgcataatatatgcaaggttcgaggtttaaacctcggccaccacaaaaa 21497743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 345
Target Start/End: Complemental strand, 22571926 - 22571886
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    ||||||||| |||||||| |||| |||||||||||||||||    
T  22571926 gtgaacttagctcagttgatatagacaatgcataatatatg 22571886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 345
Target Start/End: Complemental strand, 25598623 - 25598583
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    ||||||||| ||||||||||||  |||||||||||||||||    
T  25598623 gtgaacttagctcagttggtatggacaatgcataatatatg 25598583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 381
Target Start/End: Original strand, 30045453 - 30045529
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    ||||||||| |||| ||||||   ||||||||||||||||  ||| || || |||||||| ||| ||||||||||||    
T  30045453 gtgaacttagctcaattggtagggacaatgcataatatatacaaggttcgagattcaaacctcggccaccacaaaaa 30045529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 381
Target Start/End: Original strand, 30050616 - 30050692
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    ||||||||| |||| ||||||   ||||||||||||||||  ||| || || |||||||| ||| ||||||||||||    
T  30050616 gtgaacttagctcaattggtagggacaatgcataatatatacaaggttcgagattcaaacctcggccaccacaaaaa 30050692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 381
Target Start/End: Original strand, 30141660 - 30141736
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    ||||||||| |||| ||||||   ||||||||||||||||  ||| || || |||||||| ||| ||||||||||||    
T  30141660 gtgaacttagctcaattggtagggacaatgcataatatatacaaggttcgagattcaaacctcggccaccacaaaaa 30141736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 345
Target Start/End: Original strand, 34977204 - 34977244
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    |||| |||||||||||||||||  |||||||||||||||||    
T  34977204 gtgagcttaactcagttggtatggacaatgcataatatatg 34977244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 345
Target Start/End: Complemental strand, 37320578 - 37320538
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    |||| |||||||||||||||| | |||||||||||||||||    
T  37320578 gtgagcttaactcagttggtaaagacaatgcataatatatg 37320538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 345
Target Start/End: Complemental strand, 37620338 - 37620298
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    |||||| ||| |||||||||||| |||||||||||||||||    
T  37620338 gtgaacgtaattcagttggtatagacaatgcataatatatg 37620298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 310 - 350
Target Start/End: Original strand, 37630203 - 37630243
Alignment:
Q  310 cttaactcagttggtataaacaatgcataatatatgtaagt 350  Q
    ||||||||||||||||  |||||| ||||||||||||||||    
T  37630203 cttaactcagttggtaggaacaatacataatatatgtaagt 37630243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 333 - 381
Target Start/End: Original strand, 42451461 - 42451509
Alignment:
Q  333 tgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    ||||||||||||||||| |||||  |||||||  |||||||||||||||    
T  42451461 tgcataatatatgtaaggtttgaggttcaaactccgaccaccacaaaaa 42451509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000003; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 305 - 354
Target Start/End: Original strand, 25251510 - 25251559
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaagttttg 354  Q
    |||| ||||||||||||||||||||||||||||||||||| |||| ||||    
T  25251510 gtgagcttaactcagttggtataaacaatgcataatatatataaggtttg 25251559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 305 - 354
Target Start/End: Original strand, 9522912 - 9522961
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaagttttg 354  Q
    ||||||||| |||||||||||| |||||||||||||||||| ||| ||||    
T  9522912 gtgaacttagctcagttggtatgaacaatgcataatatatgcaaggtttg 9522961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 304 - 349
Target Start/End: Original strand, 23221391 - 23221436
Alignment:
Q  304 tgtgaacttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    ||||| |||||||||||||||| | |||||||||||||||||||||    
T  23221391 tgtgagcttaactcagttggtagagacaatgcataatatatgtaag 23221436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 305 - 354
Target Start/End: Original strand, 38553818 - 38553867
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaagttttg 354  Q
    ||||||||| |||||||||||  |||||||||||||||||||||| ||||    
T  38553818 gtgaacttagctcagttggtaagaacaatgcataatatatgtaaggtttg 38553867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 304 - 349
Target Start/End: Complemental strand, 43346626 - 43346581
Alignment:
Q  304 tgtgaacttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    |||||||||| ||||||||||||  |||||||||||||||||||||    
T  43346626 tgtgaacttagctcagttggtatggacaatgcataatatatgtaag 43346581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 304 - 381
Target Start/End: Complemental strand, 46849169 - 46849092
Alignment:
Q  304 tgtgaacttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    ||||||||||| | | |||||| | ||||||||||||||||||||  |||| | |||||||  |||||||||||||||    
T  46849169 tgtgaacttaatttaattggtagagacaatgcataatatatgtaaagtttggagttcaaaccccgaccaccacaaaaa 46849092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 381
Target Start/End: Complemental strand, 7388100 - 7388024
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    |||| |||||||||||||||    ||||||||||||||||||||| || |  ||||||||  |||||||||||||||    
T  7388100 gtgagcttaactcagttggttgggacaatgcataatatatgtaaggttcgggattcaaaccccgaccaccacaaaaa 7388024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 345
Target Start/End: Complemental strand, 8879808 - 8879768
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    |||| |||||||||||||||||| |||||||||||||||||    
T  8879808 gtgagcttaactcagttggtatagacaatgcataatatatg 8879768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 308 - 344
Target Start/End: Original strand, 23158456 - 23158492
Alignment:
Q  308 aacttaactcagttggtataaacaatgcataatatat 344  Q
    |||||||||||||||||| ||||||||||||||||||    
T  23158456 aacttaactcagttggtaaaaacaatgcataatatat 23158492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 349
Target Start/End: Original strand, 24839488 - 24839532
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    |||| |||||||||||||||||| ||||||||||| |||||||||    
T  24839488 gtgagcttaactcagttggtatagacaatgcataaaatatgtaag 24839532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 345
Target Start/End: Original strand, 27263341 - 27263381
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    ||||||||||||||||||||||  |||||||||||||||||    
T  27263341 gtgaacttaactcagttggtatggacaatgcataatatatg 27263381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 345
Target Start/End: Original strand, 27270235 - 27270275
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    ||||||||||||||||||||||  |||||||||||||||||    
T  27270235 gtgaacttaactcagttggtatggacaatgcataatatatg 27270275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 345
Target Start/End: Complemental strand, 34934341 - 34934301
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    |||| ||||||||| ||||||||||||||||||||||||||    
T  34934341 gtgagcttaactcaattggtataaacaatgcataatatatg 34934301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 329 - 381
Target Start/End: Original strand, 43267481 - 43267533
Alignment:
Q  329 acaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    ||||||||||| ||||||||| |||||| |||||||| |||||||| ||||||    
T  43267481 acaatgcataaaatatgtaaggtttgaagttcaaacaccgaccaccgcaaaaa 43267533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 354
Target Start/End: Complemental strand, 19684267 - 19684224
Alignment:
Q  311 ttaactcagttggtataaacaatgcataatatatgtaagttttg 354  Q
    |||||||||||| |||| ||||||||||||||||||||| ||||    
T  19684267 ttaactcagttgatatagacaatgcataatatatgtaaggtttg 19684224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 381
Target Start/End: Complemental strand, 35001186 - 35001116
Alignment:
Q  310 cttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    ||||||||| |||||| | |||||||||||||||| |||| |||| | |||||||  |||||||||||||||    
T  35001186 cttaactcatttggtagagacaatgcataatatatttaaggtttg-agttcaaaccccgaccaccacaaaaa 35001116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 304 - 375
Target Start/End: Original strand, 38779979 - 38780050
Alignment:
Q  304 tgtgaacttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccacca 375  Q
    ||||| ||||||||||||||||  ||||||  |||||||||||||| ||||  ||||||||  |||||||||    
T  38779979 tgtgagcttaactcagttggtaggaacaataaataatatatgtaaggtttgggattcaaaccccgaccacca 38780050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 311 - 349
Target Start/End: Original strand, 22267587 - 22267625
Alignment:
Q  311 ttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    ||||||||||||||| | |||||||||||||||||||||    
T  22267587 ttaactcagttggtagagacaatgcataatatatgtaag 22267625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 304 - 349
Target Start/End: Complemental strand, 34722083 - 34722037
Alignment:
Q  304 tgtgaacttaactcagttggtataaacaatgcataat-atatgtaag 349  Q
    ||||| ||||||||||||||||| ||||||||||||| |||||||||    
T  34722083 tgtgagcttaactcagttggtatgaacaatgcataataatatgtaag 34722037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 315 - 384
Target Start/End: Complemental strand, 3536305 - 3536236
Alignment:
Q  315 ctcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaataa 384  Q
    ||||||||||   |||||||||||||||||||||| || |  ||||||||  ||||||| ||||||||||    
T  3536305 ctcagttggttggaacaatgcataatatatgtaaggttcgggattcaaactccgaccactacaaaaataa 3536236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 345
Target Start/End: Complemental strand, 22991453 - 22991412
Alignment:
Q  304 tgtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    ||||| |||||||||||||||||  |||||||||||||||||    
T  22991453 tgtgagcttaactcagttggtatggacaatgcataatatatg 22991412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 349
Target Start/End: Original strand, 23172403 - 23172444
Alignment:
Q  308 aacttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    ||||||||||||||||||  ||||||| ||||||||||||||    
T  23172403 aacttaactcagttggtaggaacaatgtataatatatgtaag 23172444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 315 - 384
Target Start/End: Complemental strand, 27158938 - 27158869
Alignment:
Q  315 ctcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaataa 384  Q
    |||||||||||  ||||||| |||||||||| ||  |||||  ||||||| || ||||||||||||||||    
T  27158938 ctcagttggtaagaacaatgaataatatatgcaaagtttgaggttcaaacctcaaccaccacaaaaataa 27158869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 349
Target Start/End: Complemental strand, 31885995 - 31885962
Alignment:
Q  316 tcagttggtataaacaatgcataatatatgtaag 349  Q
    ||||||||||| ||||||||||||||||||||||    
T  31885995 tcagttggtatgaacaatgcataatatatgtaag 31885962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 304 - 348
Target Start/End: Original strand, 2450579 - 2450623
Alignment:
Q  304 tgtgaacttaactcagttggtataaacaatgcataatatatgtaa 348  Q
    ||||| ||||||||||||||||| |||||| ||||| ||||||||    
T  2450579 tgtgagcttaactcagttggtatgaacaatacataaaatatgtaa 2450623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 381
Target Start/End: Complemental strand, 3883131 - 3883055
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    ||||||||| ||||||||||| |||||||| || ||||||| ||| ||||| ||| ||||  || |||||| |||||    
T  3883131 gtgaacttacctcagttggtagaaacaatgtatgatatatgcaagatttgagatttaaactccggccaccataaaaa 3883055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 381
Target Start/End: Complemental strand, 5458132 - 5458056
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    |||| |||| |||||||| ||  |||||||||||||||||| ||| | ||  |||||||| |||| |||||||||||    
T  5458132 gtgagcttagctcagttgataagaacaatgcataatatatgcaaggtctgggattcaaacctcgaacaccacaaaaa 5458056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 381
Target Start/End: Original strand, 5526725 - 5526801
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    |||| |||| ||||||||||||  |||||||||||||||| |||| ||||   |||||||  ||||||||| |||||    
T  5526725 gtgagcttagctcagttggtatggacaatgcataatatatataagatttggggttcaaaccccgaccaccataaaaa 5526801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 310 - 354
Target Start/End: Complemental strand, 8261499 - 8261455
Alignment:
Q  310 cttaactcagttggtataaacaatgcataatatatgtaagttttg 354  Q
    ||||| |||||||||||| ||||||||||| ||||||||| ||||    
T  8261499 cttaagtcagttggtatagacaatgcataaaatatgtaaggtttg 8261455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 345
Target Start/End: Original strand, 8683070 - 8683110
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    |||| |||| ||||||||||||| |||||||||||||||||    
T  8683070 gtgagcttagctcagttggtatagacaatgcataatatatg 8683110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 349
Target Start/End: Complemental strand, 24099296 - 24099252
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    ||||||| | |||| ||| ||||||||||||||||||||||||||    
T  24099296 gtgaactaagctcaattgatataaacaatgcataatatatgtaag 24099252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 345
Target Start/End: Complemental strand, 27993090 - 27993050
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    |||| ||||||||||||||||| |||||||||||| |||||    
T  27993090 gtgagcttaactcagttggtatgaacaatgcataaaatatg 27993050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 381
Target Start/End: Complemental strand, 28200446 - 28200370
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    |||| ||||||||||||||||  |||||| ||||||||||| ||  || ||  |||||||  |||||||||||||||    
T  28200446 gtgagcttaactcagttggtaggaacaatacataatatatgcaaaattcgaggttcaaactccgaccaccacaaaaa 28200370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 381
Target Start/End: Complemental strand, 30006153 - 30006077
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    ||||||||| |||||||||||| || |||||||||| |||| ||| ||||   |||||||  | |||||||||||||    
T  30006153 gtgaacttagctcagttggtatgaataatgcataatgtatgcaaggtttggggttcaaaccccaaccaccacaaaaa 30006077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 304 - 344
Target Start/End: Original strand, 30467980 - 30468020
Alignment:
Q  304 tgtgaacttaactcagttggtataaacaatgcataatatat 344  Q
    ||||| ||||||||||||||| | |||||||||||||||||    
T  30467980 tgtgagcttaactcagttggtttgaacaatgcataatatat 30468020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 381
Target Start/End: Original strand, 32228439 - 32228515
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    |||| |||||||||| ||||||  |||| |||||||||||||||| | |||  ||||||  ||| ||||||||||||    
T  32228439 gtgagcttaactcagctggtatggacaaagcataatatatgtaaggtctgaggttcaaatctcggccaccacaaaaa 32228515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 349
Target Start/End: Complemental strand, 34448671 - 34448627
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    |||| ||||||||||||||| |  |||||||||||||||||||||    
T  34448671 gtgagcttaactcagttggtttggacaatgcataatatatgtaag 34448627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 310 - 349
Target Start/End: Original strand, 36284916 - 36284956
Alignment:
Q  310 cttaactcagttggtat-aaacaatgcataatatatgtaag 349  Q
    ||||||||||||||||| ||||||||||||| |||||||||    
T  36284916 cttaactcagttggtataaaacaatgcataaaatatgtaag 36284956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 345
Target Start/End: Complemental strand, 39280879 - 39280839
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    ||||||||| |||||||||||  ||||||||||||||||||    
T  39280879 gtgaacttagctcagttggtaagaacaatgcataatatatg 39280839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 345
Target Start/End: Original strand, 46551995 - 46552035
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    |||| |||||||||||||||||| ||||||||| |||||||    
T  46551995 gtgagcttaactcagttggtatagacaatgcatgatatatg 46552035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000003; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 381
Target Start/End: Complemental strand, 2617267 - 2617190
Alignment:
Q  304 tgtgaacttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    ||||| ||||||| |||||||| | ||||||||||||||||||||| |||||  || |||| ||| ||||||||||||    
T  2617267 tgtgagcttaacttagttggtagagacaatgcataatatatgtaaggtttgaggtttaaacctcggccaccacaaaaa 2617190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 381
Target Start/End: Complemental strand, 331947 - 331871
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    |||| |||||||||||||||| | ||||||||||||||||| ||| ||||  |||||||| ||| |||| |||||||    
T  331947 gtgagcttaactcagttggtagagacaatgcataatatatgcaaggtttgggattcaaacctcggccactacaaaaa 331871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 305 - 372
Target Start/End: Complemental strand, 1989103 - 1989037
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgacca 372  Q
    |||| ||||||||||||||||| | |||||||||||||||||||| |||||  ||||||| |||||||    
T  1989103 gtgagcttaactcagttggtatga-caatgcataatatatgtaaggtttgaggttcaaacctcgacca 1989037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 305 - 352
Target Start/End: Original strand, 7730664 - 7730711
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaagttt 352  Q
    |||||||||  ||||||||||||||||||||||||| |||||||||||    
T  7730664 gtgaacttagttcagttggtataaacaatgcataatgtatgtaagttt 7730711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 310 - 349
Target Start/End: Complemental strand, 17420774 - 17420735
Alignment:
Q  310 cttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  17420774 cttaactcagttggtataaacaatacataatatatgtaag 17420735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 303 - 349
Target Start/End: Complemental strand, 9244172 - 9244126
Alignment:
Q  303 atgtgaacttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    |||||||||||||||||||||||| ||||||| |||| |||||||||    
T  9244172 atgtgaacttaactcagttggtatgaacaatgaataaaatatgtaag 9244126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 381
Target Start/End: Complemental strand, 8629757 - 8629681
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    |||| ||||||||| |||||||  ||||||||||||||||| ||| || |   ||||||| ||||||||||||||||    
T  8629757 gtgagcttaactcaattggtatggacaatgcataatatatgcaaggttcggggttcaaacctcgaccaccacaaaaa 8629681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 373
Target Start/End: Complemental strand, 9311991 - 9311923
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccac 373  Q
    |||| ||||||||||||||||| || ||| ||||||||||||||| |||||  |||||||  |||||||    
T  9311991 gtgagcttaactcagttggtatgaataatacataatatatgtaagatttgaggttcaaaccccgaccac 9311923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 308 - 344
Target Start/End: Complemental strand, 14773040 - 14773004
Alignment:
Q  308 aacttaactcagttggtataaacaatgcataatatat 344  Q
    ||||||||||||||||||| |||||||||||||||||    
T  14773040 aacttaactcagttggtatgaacaatgcataatatat 14773004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 345
Target Start/End: Original strand, 28951399 - 28951439
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    |||| ||||||||||||||||| ||||||||||||||||||    
T  28951399 gtgagcttaactcagttggtatgaacaatgcataatatatg 28951439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 345
Target Start/End: Complemental strand, 29335636 - 29335596
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    |||| |||||||||||| |||||||||||||||||||||||    
T  29335636 gtgagcttaactcagttagtataaacaatgcataatatatg 29335596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 352
Target Start/End: Complemental strand, 6470677 - 6470630
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaagttt 352  Q
    |||| ||||||||||||| || | ||||||||||||||||||||||||    
T  6470677 gtgagcttaactcagttgataaagacaatgcataatatatgtaagttt 6470630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 348
Target Start/End: Complemental strand, 24438343 - 24438300
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaa 348  Q
    |||||||||||||||||||||  || ||||||||||||||||||    
T  24438343 gtgaacttaactcagttggtaagaataatgcataatatatgtaa 24438300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 308 - 347
Target Start/End: Original strand, 30345398 - 30345437
Alignment:
Q  308 aacttaactcagttggtataaacaatgcataatatatgta 347  Q
    ||||||||| |||||||| |||||||||||||||||||||    
T  30345398 aacttaacttagttggtagaaacaatgcataatatatgta 30345437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 306 - 349
Target Start/End: Complemental strand, 32409238 - 32409195
Alignment:
Q  306 tgaacttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    ||||||||||| |||||||| | |||||||||||||||||||||    
T  32409238 tgaacttaactgagttggtaaagacaatgcataatatatgtaag 32409195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 311 - 345
Target Start/End: Complemental strand, 1918513 - 1918479
Alignment:
Q  311 ttaactcagttggtataaacaatgcataatatatg 345  Q
    ||||||||||||||||| |||||||||||||||||    
T  1918513 ttaactcagttggtatagacaatgcataatatatg 1918479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 327 - 381
Target Start/End: Complemental strand, 17113499 - 17113445
Alignment:
Q  327 aaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    ||||||||||||||||||| ||| | |||  ||||||| ||||||||||||||||    
T  17113499 aaacaatgcataatatatgcaaggtctgaggttcaaacttcgaccaccacaaaaa 17113445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 345
Target Start/End: Original strand, 361753 - 361794
Alignment:
Q  304 tgtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    ||||| |||||||||||||||||  |||||||||||||||||    
T  361753 tgtgagcttaactcagttggtatggacaatgcataatatatg 361794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 345
Target Start/End: Complemental strand, 2726475 - 2726438
Alignment:
Q  308 aacttaactcagttggtataaacaatgcataatatatg 345  Q
    |||||||||||||||||||  |||||||||||||||||    
T  2726475 aacttaactcagttggtatggacaatgcataatatatg 2726438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 354
Target Start/End: Complemental strand, 10497213 - 10497164
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaagttttg 354  Q
    ||||||||||||||||| |||   ||||||||||||||||||||| ||||    
T  10497213 gtgaacttaactcagtttgtaaggacaatgcataatatatgtaaggtttg 10497164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 349
Target Start/End: Complemental strand, 23635776 - 23635731
Alignment:
Q  304 tgtgaacttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    ||||| |||| |||||||| |||| |||||||||||||||||||||    
T  23635776 tgtgagcttatctcagttgatatatacaatgcataatatatgtaag 23635731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 345
Target Start/End: Original strand, 2213297 - 2213337
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    |||||||||||||| ||||||  ||||||||||||||||||    
T  2213297 gtgaacttaactcaattggtaagaacaatgcataatatatg 2213337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 345
Target Start/End: Original strand, 3358391 - 3358431
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    |||||||||||||||||||| |  |||||||||||||||||    
T  3358391 gtgaacttaactcagttggtttggacaatgcataatatatg 3358431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 381
Target Start/End: Original strand, 4826290 - 4826366
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    |||||||||  ||| |||||| | ||||||||||||||||||||| || ||  |||||||  || ||||||||||||    
T  4826290 gtgaacttagttcaattggtagagacaatgcataatatatgtaaggttcgaggttcaaactccggccaccacaaaaa 4826366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 381
Target Start/End: Complemental strand, 8138519 - 8138443
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    ||||| ||| |||||||| ||  |||||||||||||||||||||| | ||   ||||||| || |||||||||||||    
T  8138519 gtgaatttagctcagttgataagaacaatgcataatatatgtaaggtctggggttcaaacctcaaccaccacaaaaa 8138443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 345
Target Start/End: Original strand, 13496116 - 13496156
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    |||| ||||||||||||| ||| ||||||||||||||||||    
T  13496116 gtgagcttaactcagttgatatgaacaatgcataatatatg 13496156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 349
Target Start/End: Original strand, 19277574 - 19277618
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    |||||||||||||||||| ||  |||||||||||||||| |||||    
T  19277574 gtgaacttaactcagttgataggaacaatgcataatataggtaag 19277618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 329 - 381
Target Start/End: Complemental strand, 27080841 - 27080789
Alignment:
Q  329 acaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    ||||||||||||||||| ||| | || |||||||||  |||||||||||||||    
T  27080841 acaatgcataatatatgcaagctctggaattcaaaccccgaccaccacaaaaa 27080789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 304 - 336
Target Start/End: Original strand, 31374018 - 31374050
Alignment:
Q  304 tgtgaacttaactcagttggtataaacaatgca 336  Q
    ||||| |||||||||||||||||||||||||||    
T  31374018 tgtgagcttaactcagttggtataaacaatgca 31374050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 345
Target Start/End: Complemental strand, 33938740 - 33938700
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    |||| |||| |||||||||||| ||||||||||||||||||    
T  33938740 gtgagcttagctcagttggtatgaacaatgcataatatatg 33938700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 381
Target Start/End: Original strand, 34701147 - 34701223
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    |||||||||  ||||||||||  |||||||||||||||||| ||| | |||  |||||||  || ||||||||||||    
T  34701147 gtgaacttagttcagttggtaggaacaatgcataatatatgcaaggtctgaggttcaaactccggccaccacaaaaa 34701223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.00000000001; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 381
Target Start/End: Complemental strand, 34420923 - 34420847
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    |||| ||||||||| |||||||  ||||||||||| ||||| ||| |||||  ||||||| ||||||||||||||||    
T  34420923 gtgagcttaactcaattggtatggacaatgcataaaatatgcaaggtttgaggttcaaacctcgaccaccacaaaaa 34420847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 310 - 349
Target Start/End: Complemental strand, 43073492 - 43073453
Alignment:
Q  310 cttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  43073492 cttaactcagttggtaaaaacaatgcataatatatgtaag 43073453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 311 - 355
Target Start/End: Complemental strand, 1230716 - 1230672
Alignment:
Q  311 ttaactcagttggtataaacaatgcataatatatgtaagttttga 355  Q
    |||||||||||||||  |||||||||||||||||||||| |||||    
T  1230716 ttaactcagttggtaggaacaatgcataatatatgtaaggtttga 1230672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 349
Target Start/End: Complemental strand, 3456882 - 3456838
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    |||||||||||||| ||| ||| ||||||||||||||||||||||    
T  3456882 gtgaacttaactcaattgatatgaacaatgcataatatatgtaag 3456838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 349
Target Start/End: Original strand, 3650520 - 3650564
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    |||| |||||||||||||||| ||| |||||||||||||||||||    
T  3650520 gtgagcttaactcagttggtagaaaaaatgcataatatatgtaag 3650564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 381
Target Start/End: Complemental strand, 6038336 - 6038260
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    ||||||||| |||||||| |||  ||||||||||||||||||||| | || | |||||||  || ||||||||||||    
T  6038336 gtgaacttagctcagttgatatggacaatgcataatatatgtaaggtctggagttcaaactccggccaccacaaaaa 6038260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 381
Target Start/End: Original strand, 29376901 - 29376977
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    |||| |||||||||||||||||  ||||||| ||||||||| ||| | || | |||||||  |||||||||||||||    
T  29376901 gtgagcttaactcagttggtatggacaatgcgtaatatatgcaaggtctggagttcaaaccccgaccaccacaaaaa 29376977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 349
Target Start/End: Original strand, 44293575 - 44293619
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    |||| |||| ||||||||||||| |||||||||||||||||||||    
T  44293575 gtgagcttagctcagttggtatagacaatgcataatatatgtaag 44293619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 348
Target Start/End: Complemental strand, 13272583 - 13272540
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaa 348  Q
    |||||||||||||||||| |||  ||||||||||||||||||||    
T  13272583 gtgaacttaactcagttgatatggacaatgcataatatatgtaa 13272540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 349
Target Start/End: Original strand, 41603066 - 41603105
Alignment:
Q  310 cttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    ||||||||| ||||||| ||||||||||||||||||||||    
T  41603066 cttaactcaattggtatgaacaatgcataatatatgtaag 41603105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 311 - 381
Target Start/End: Complemental strand, 13284320 - 13284250
Alignment:
Q  311 ttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    |||||||||||| ||| ||||||| ||||||||| |||| |||||  |||||||  | |||||||||||||    
T  13284320 ttaactcagttgatatgaacaatgtataatatatataaggtttgaggttcaaaccccaaccaccacaaaaa 13284250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 311 - 381
Target Start/End: Original strand, 43778025 - 43778095
Alignment:
Q  311 ttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    ||||||||||||||||| ||||||||||| ||||| ||| | |||  |||||||  |||||||||| ||||    
T  43778025 ttaactcagttggtatagacaatgcataaaatatgcaaggtctgaggttcaaactccgaccaccaccaaaa 43778095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 310 - 344
Target Start/End: Complemental strand, 44037421 - 44037387
Alignment:
Q  310 cttaactcagttggtataaacaatgcataatatat 344  Q
    ||||||||||||||||| |||||||||||||||||    
T  44037421 cttaactcagttggtatgaacaatgcataatatat 44037387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 349
Target Start/End: Original strand, 574383 - 574428
Alignment:
Q  304 tgtgaacttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    ||||| |||| |||||||| |||| |||||||||||||||||||||    
T  574383 tgtgagcttagctcagttgatatagacaatgcataatatatgtaag 574428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 356
Target Start/End: Original strand, 12959295 - 12959340
Alignment:
Q  311 ttaactcagttggtataaacaatgcataatatatgtaagttttgaa 356  Q
    |||||| | |||||| ||||||||||||||||||||||| ||||||    
T  12959295 ttaacttaattggtagaaacaatgcataatatatgtaaggtttgaa 12959340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 345
Target Start/End: Complemental strand, 20469361 - 20469332
Alignment:
Q  316 tcagttggtataaacaatgcataatatatg 345  Q
    ||||||||||||||||||||||||||||||    
T  20469361 tcagttggtataaacaatgcataatatatg 20469332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 349
Target Start/End: Original strand, 24202154 - 24202195
Alignment:
Q  308 aacttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    ||||||| |||||||||||||||||| |||||||||| ||||    
T  24202154 aacttaattcagttggtataaacaatacataatatatataag 24202195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 381
Target Start/End: Complemental strand, 32944894 - 32944825
Alignment:
Q  312 taactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    |||||||||||||||  ||||||||||| ||||| ||| | |||  |||||||  |||||||||||||||    
T  32944894 taactcagttggtatggacaatgcataaaatatgcaaggtctgaggttcaaaccccgaccaccacaaaaa 32944825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 345
Target Start/End: Original strand, 40795376 - 40795417
Alignment:
Q  304 tgtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    ||||| ||||||||||||||||| |||||| |||||||||||    
T  40795376 tgtgagcttaactcagttggtatgaacaatacataatatatg 40795417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 345
Target Start/End: Complemental strand, 1877723 - 1877683
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    |||| ||||||||||||| |||| |||||||||||||||||    
T  1877723 gtgagcttaactcagttgatatagacaatgcataatatatg 1877683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 349
Target Start/End: Complemental strand, 5830358 - 5830314
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    |||||||||| | ||||||||| ||||||| ||||||||||||||    
T  5830358 gtgaacttaatttagttggtatgaacaatgtataatatatgtaag 5830314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 329 - 381
Target Start/End: Complemental strand, 11603874 - 11603822
Alignment:
Q  329 acaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    ||||||||||||||||| ||| || | | ||||||| ||||||||||||||||    
T  11603874 acaatgcataatatatgcaaggttgggagttcaaacctcgaccaccacaaaaa 11603822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 345
Target Start/End: Original strand, 13286131 - 13286171
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    |||| |||| ||||||||||||| |||||||||||||||||    
T  13286131 gtgagcttagctcagttggtatagacaatgcataatatatg 13286171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 345
Target Start/End: Complemental strand, 13357502 - 13357462
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    |||| |||||||||||||||||  |||||||||||||||||    
T  13357502 gtgagcttaactcagttggtatggacaatgcataatatatg 13357462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 349
Target Start/End: Original strand, 15188899 - 15188943
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    |||| |||||||||||| ||||  |||||||||||||||||||||    
T  15188899 gtgagcttaactcagttagtatggacaatgcataatatatgtaag 15188943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 349
Target Start/End: Complemental strand, 16823246 - 16823202
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    |||| |||||||||||||||||| || || |||||||||||||||    
T  16823246 gtgagcttaactcagttggtatagactatacataatatatgtaag 16823202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 349
Target Start/End: Original strand, 21557433 - 21557477
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    |||| |||||||||||| ||||  |||||||||||||||||||||    
T  21557433 gtgagcttaactcagttagtatggacaatgcataatatatgtaag 21557477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 349
Target Start/End: Complemental strand, 33373813 - 33373769
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    |||| |||||||||||||||||  ||||| |||||||||||||||    
T  33373813 gtgaccttaactcagttggtatggacaattcataatatatgtaag 33373769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 349
Target Start/End: Complemental strand, 36588155 - 36588111
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    ||||||||| |||||||||||  ||||||| ||||||||||||||    
T  36588155 gtgaacttagctcagttggtaggaacaatgtataatatatgtaag 36588111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 349
Target Start/End: Original strand, 36919311 - 36919355
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    |||| ||||||||||||||||  ||||||| ||||||||||||||    
T  36919311 gtgagcttaactcagttggtaagaacaatgtataatatatgtaag 36919355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 381
Target Start/End: Original strand, 40316856 - 40316932
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    |||| |||| |||||||| ||| || ||||||||||||||||||  || | | ||||||| |||||||||| |||||    
T  40316856 gtgagcttatctcagttgatatgaataatgcataatatatgtaaagttcggatttcaaacttcgaccaccaaaaaaa 40316932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 349
Target Start/End: Complemental strand, 41388719 - 41388675
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    |||| ||||||  |||||||||| |||||||||||||||||||||    
T  41388719 gtgagcttaacctagttggtatagacaatgcataatatatgtaag 41388675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 349
Target Start/End: Original strand, 41625194 - 41625238
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    |||| |||| |||||||||||| || |||||||||||||||||||    
T  41625194 gtgagcttagctcagttggtatgaataatgcataatatatgtaag 41625238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 349
Target Start/End: Complemental strand, 42060518 - 42060474
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    ||||||||||||||||||||| ||||||| |  ||||||||||||    
T  42060518 gtgaacttaactcagttggtaaaaacaataccgaatatatgtaag 42060474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 337 - 381
Target Start/End: Original strand, 42688815 - 42688859
Alignment:
Q  337 taatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    ||||||||||||| ||||| |||||||| |||||||| |||||||    
T  42688815 taatatatgtaaggtttgagattcaaacctcgaccactacaaaaa 42688859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 345
Target Start/End: Original strand, 44019549 - 44019589
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    ||||||||| |||||||||||  ||||||||||||||||||    
T  44019549 gtgaacttagctcagttggtaagaacaatgcataatatatg 44019589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.00000000001; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 345
Target Start/End: Complemental strand, 16579435 - 16579395
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  16579435 gtgaacttaactcagttggtatgaacaatgcataatatatg 16579395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 304 - 349
Target Start/End: Complemental strand, 9123907 - 9123862
Alignment:
Q  304 tgtgaacttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    ||||| |||||||||||||||| | |||||||||||||||||||||    
T  9123907 tgtgagcttaactcagttggtaaagacaatgcataatatatgtaag 9123862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 349
Target Start/End: Complemental strand, 12909227 - 12909183
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    ||||| ||| |||||||||||| ||||||||||||||||||||||    
T  12909227 gtgaatttagctcagttggtatgaacaatgcataatatatgtaag 12909183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 304 - 348
Target Start/End: Original strand, 16188823 - 16188867
Alignment:
Q  304 tgtgaacttaactcagttggtataaacaatgcataatatatgtaa 348  Q
    |||||||||| ||||||||||||  ||||||||||||||||||||    
T  16188823 tgtgaacttagctcagttggtatggacaatgcataatatatgtaa 16188867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 304 - 348
Target Start/End: Original strand, 16188925 - 16188969
Alignment:
Q  304 tgtgaacttaactcagttggtataaacaatgcataatatatgtaa 348  Q
    |||||||||| ||||||||||||  ||||||||||||||||||||    
T  16188925 tgtgaacttagctcagttggtatggacaatgcataatatatgtaa 16188969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 345
Target Start/End: Complemental strand, 18589928 - 18589888
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    |||| ||||||||||||||||| ||||||||||||||||||    
T  18589928 gtgagcttaactcagttggtatgaacaatgcataatatatg 18589888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 345
Target Start/End: Complemental strand, 26034669 - 26034629
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    |||| ||||||||||||||||| ||||||||||||||||||    
T  26034669 gtgagcttaactcagttggtatgaacaatgcataatatatg 26034629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 304 - 364
Target Start/End: Complemental strand, 31602887 - 31602827
Alignment:
Q  304 tgtgaacttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaac 364  Q
    ||||| |||| |||||||||||| |||||||||||||||||| ||| || || ||||||||    
T  31602887 tgtgaccttagctcagttggtatgaacaatgcataatatatgcaaggttcgagattcaaac 31602827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 345
Target Start/End: Original strand, 43462994 - 43463034
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    ||||||||||||||||||||||||||||| |||| ||||||    
T  43462994 gtgaacttaactcagttggtataaacaatacatattatatg 43463034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 364
Target Start/End: Original strand, 689547 - 689606
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaac 364  Q
    |||||||||||||||||| |||  |||||| |||||||||||||| |||||  |||||||    
T  689547 gtgaacttaactcagttgatatggacaatgtataatatatgtaagatttgatgttcaaac 689606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 304 - 379
Target Start/End: Complemental strand, 1538870 - 1538795
Alignment:
Q  304 tgtgaacttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaa 379  Q
    ||||| ||||||||| ||||||||||||| |||||||||||| ||| |  ||  |||||||  |||||||||||||    
T  1538870 tgtgagcttaactcaattggtataaacaacgcataatatatgcaaggtccgaggttcaaacgccgaccaccacaaa 1538795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 380
Target Start/End: Original strand, 3389162 - 3389237
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaa 380  Q
    |||||| |||||||||||||||  ||||||||||||||||| ||| | ||   ||||||||||| ||| |||||||    
T  3389162 gtgaacataactcagttggtatggacaatgcataatatatgcaagatctggggttcaaacatcggccatcacaaaa 3389237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 381
Target Start/End: Complemental strand, 12159457 - 12159386
Alignment:
Q  310 cttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    |||||||||||||||| | |||||| |||||||||||||| ||    ||||||||  |||||||||||||||    
T  12159457 cttaactcagttggtagagacaatgtataatatatgtaaggttcaggattcaaaccccgaccaccacaaaaa 12159386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 354
Target Start/End: Complemental strand, 15105165 - 15105122
Alignment:
Q  311 ttaactcagttggtataaacaatgcataatatatgtaagttttg 354  Q
    ||||||||||||||| |||||||||||||||||| |||| ||||    
T  15105165 ttaactcagttggtaaaaacaatgcataatatatataaggtttg 15105122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 344
Target Start/End: Complemental strand, 29667932 - 29667893
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatat 344  Q
    |||||||||||||| |||||| ||||||||||||||||||    
T  29667932 gtgaacttaactcaattggtaaaaacaatgcataatatat 29667893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 299 - 349
Target Start/End: Complemental strand, 4763253 - 4763203
Alignment:
Q  299 tgtcatgtgaacttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    ||||||||||  |||||||| |||||| | |||||||||||||||||||||    
T  4763253 tgtcatgtgagtttaactcaattggtaaagacaatgcataatatatgtaag 4763203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 311 - 381
Target Start/End: Original strand, 7713538 - 7713607
Alignment:
Q  311 ttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    |||||||||||| ||| || ||||||||||||||| ||| |||| | |||||||  |||||||||||||||    
T  7713538 ttaactcagttgatatgaataatgcataatatatgcaaggtttggagttcaaac-ccgaccaccacaaaaa 7713607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 345
Target Start/End: Complemental strand, 5246214 - 5246177
Alignment:
Q  308 aacttaactcagttggtataaacaatgcataatatatg 345  Q
    ||||||||||| |||||||| |||||||||||||||||    
T  5246214 aacttaactcaattggtatagacaatgcataatatatg 5246177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 354
Target Start/End: Original strand, 11647197 - 11647246
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaagttttg 354  Q
    |||||||||||||||||||||   ||||||||||||||||| ||| ||||    
T  11647197 gtgaacttaactcagttggtaaggacaatgcataatatatgcaaggtttg 11647246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 349
Target Start/End: Complemental strand, 24443157 - 24443116
Alignment:
Q  308 aacttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    ||||||| ||||||| ||||||||||||||||||||| ||||    
T  24443157 aacttaattcagttgatataaacaatgcataatatatataag 24443116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 349
Target Start/End: Complemental strand, 27079727 - 27079694
Alignment:
Q  316 tcagttggtataaacaatgcataatatatgtaag 349  Q
    ||||||||||||||||||||||||||||| ||||    
T  27079727 tcagttggtataaacaatgcataatatatctaag 27079694  T

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Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 349
Target Start/End: Complemental strand, 36162939 - 36162906
Alignment:
Q  316 tcagttggtataaacaatgcataatatatgtaag 349  Q
    ||||||||||| ||||||||||||||||||||||    
T  36162939 tcagttggtatgaacaatgcataatatatgtaag 36162906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 378
Target Start/End: Complemental strand, 41651000 - 41650928
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaa 378  Q
    |||| |||||||||||||||||  ||||||||||||||||| ||| |  | | |||||||| ||||||||||||    
T  41651000 gtgagcttaactcagttggtatggacaatgcataatatatgcaaggtccg-agttcaaacaccgaccaccacaa 41650928  T

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Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 345
Target Start/End: Complemental strand, 1669641 - 1669601
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    ||||||||| |||||||||||  ||||||||||||||||||    
T  1669641 gtgaacttagctcagttggtaagaacaatgcataatatatg 1669601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 345
Target Start/End: Complemental strand, 5107306 - 5107266
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    |||| ||||||||||||||||| || |||||||||||||||    
T  5107306 gtgagcttaactcagttggtatgaataatgcataatatatg 5107266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 349
Target Start/End: Original strand, 5614765 - 5614809
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    |||||||||||||||||| |||  | |||||||||||||||||||    
T  5614765 gtgaacttaactcagttgatatggataatgcataatatatgtaag 5614809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 345
Target Start/End: Original strand, 13864344 - 13864384
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    |||| ||||||||||||||||| |||||| |||||||||||    
T  13864344 gtgagcttaactcagttggtatgaacaatacataatatatg 13864384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 345
Target Start/End: Original strand, 17046334 - 17046374
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    |||| |||||||||||||||||  |||||||||||||||||    
T  17046334 gtgagcttaactcagttggtatggacaatgcataatatatg 17046374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 345
Target Start/End: Original strand, 19248479 - 19248519
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    |||| |||| ||||||||||||| |||||||||||||||||    
T  19248479 gtgagcttagctcagttggtatagacaatgcataatatatg 19248519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 349
Target Start/End: Original strand, 26409253 - 26409297
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    |||| |||| ||||||||||||  |||||||||||||||||||||    
T  26409253 gtgagcttagctcagttggtatggacaatgcataatatatgtaag 26409297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 349
Target Start/End: Original strand, 29695015 - 29695059
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    |||| ||||||||||||| |||  |||||||||||||||||||||    
T  29695015 gtgaccttaactcagttgatatggacaatgcataatatatgtaag 29695059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 310 - 381
Target Start/End: Original strand, 29962363 - 29962432
Alignment:
Q  310 cttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    |||| |||||||| || |||||||| |||||||||| ||| |||||   |||||| ||||||||||||||||    
T  29962363 cttagctcagttgatagaaacaatgtataatatatgcaaggtttgag--tcaaacctcgaccaccacaaaaa 29962432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 310 - 381
Target Start/End: Complemental strand, 30012435 - 30012366
Alignment:
Q  310 cttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    |||| |||||||| || |||||||| |||||||||| ||| |||||   |||||| ||||||||||||||||    
T  30012435 cttagctcagttgatagaaacaatgtataatatatgcaaggtttgag--tcaaacctcgaccaccacaaaaa 30012366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 304 - 348
Target Start/End: Complemental strand, 35413353 - 35413310
Alignment:
Q  304 tgtgaacttaactcagttggtataaacaatgcataatatatgtaa 348  Q
    ||||| |||||||||||||||| || |||||||||||||||||||    
T  35413353 tgtgagcttaactcagttggtagaa-caatgcataatatatgtaa 35413310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 381
Target Start/End: Complemental strand, 37614488 - 37614412
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    |||| |||| ||||||||||| | |||| |||||||||||| ||| || ||  ||||||| ||| ||||||||||||    
T  37614488 gtgagcttagctcagttggtagagacaacgcataatatatgcaaggttcgaggttcaaacttcggccaccacaaaaa 37614412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 349
Target Start/End: Original strand, 38370750 - 38370794
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    |||||||||||||| ||  |||||||||||||||| |||||||||    
T  38370750 gtgaacttaactcaattaatataaacaatgcataaaatatgtaag 38370794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 349
Target Start/End: Original strand, 42515807 - 42515851
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    |||| ||||| |||||||||||  |||||||||||||||||||||    
T  42515807 gtgagcttaattcagttggtatggacaatgcataatatatgtaag 42515851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 311 - 381
Target Start/End: Complemental strand, 14241 - 14171
Alignment:
Q  311 ttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    |||||||||||||||| |||||||||||||||||| ||| | ||   |||||||  |||||||||||||||    
T  14241 ttaactcagttggtatgaacaatgcataatatatgcaaggtatgtggttcaaaccccgaccaccacaaaaa 14171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0350 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0350
Description:

Target: scaffold0350; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 381
Target Start/End: Original strand, 1248 - 1324
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    ||||||||| |||||||| |||  ||||||||||||||||||||| | || | |||||||  || ||||||||||||    
T  1248 gtgaacttagctcagttgatatggacaatgcataatatatgtaaggtctggagttcaaactccggccaccacaaaaa 1324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 381
Target Start/End: Original strand, 42725 - 42801
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    ||||||||||||||||||| | |||||||  |||||||||||||| | || | |||||||   ||||||||||||||    
T  42725 gtgaacttaactcagttggaagaaacaatatataatatatgtaaggtctgtagttcaaacccggaccaccacaaaaa 42801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 306 - 381
Target Start/End: Complemental strand, 17831 - 17756
Alignment:
Q  306 tgaacttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    ||||||||||| ||||||||   | ||||||||||||||| ||| |||||  ||||||| ||||| ||||||||||    
T  17831 tgaacttaacttagttggtagggaaaatgcataatatatgcaaggtttgagtttcaaacttcgacaaccacaaaaa 17756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 306 - 349
Target Start/End: Original strand, 44419 - 44462
Alignment:
Q  306 tgaacttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    |||| ||||||||||||||| ||||||||||||||| |||||||    
T  44419 tgaatttaactcagttggtaaaaacaatgcataatacatgtaag 44462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 345
Target Start/End: Complemental strand, 6882 - 6842
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    ||||||||| ||||||||||| ||||||| |||||||||||    
T  6882 gtgaacttatctcagttggtaaaaacaatacataatatatg 6842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 381
Target Start/End: Complemental strand, 21816 - 21740
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaagttttgaaattcaaacatcgaccaccacaaaaa 381  Q
    |||| |||| ||||||||||||| ||||||||||| ||||  ||| | |||  ||||||  ||||||||||||||||    
T  21816 gtgagcttagctcagttggtatagacaatgcataaaatatacaaggtatgaggttcaaatctcgaccaccacaaaaa 21740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 349
Target Start/End: Original strand, 7474 - 7518
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatgtaag 349  Q
    |||| ||||||||| ||||||| |||||||||||| |||||||||    
T  7474 gtgagcttaactcaattggtatgaacaatgcataaaatatgtaag 7518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 341
Target Start/End: Complemental strand, 189652 - 189616
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataata 341  Q
    ||||||||||||||||||||||  |||||||||||||    
T  189652 gtgaacttaactcagttggtatggacaatgcataata 189616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 345
Target Start/End: Original strand, 122891 - 122931
Alignment:
Q  305 gtgaacttaactcagttggtataaacaatgcataatatatg 345  Q
    |||| ||||||||| ||||||| ||||||||||||||||||    
T  122891 gtgagcttaactcaattggtatgaacaatgcataatatatg 122931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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