View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1773_low_81 (Length: 363)
Name: NF1773_low_81
Description: NF1773
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1773_low_81 |
 |  |
|
Alignment Details
Target: chr4 (Bit Score: 313; Significance: 1e-176; HSPs: 5)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 313; E-Value: 1e-176
Query Start/End: Original strand, 13 - 353
Target Start/End: Original strand, 1479384 - 1479724
Alignment:
| Q |
13 |
tcactattatcatcttcataagaattaacatgatcaacaacttttttagaatctagagcgaagtccacgttgtcgaattgaaggtctgagatccattgca |
112 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1479384 |
tcactattatcatcttcataagaattaacatgatcaacaactcttttagaatctagagcgaagtccacgttgtcgaattgaaggtctgagatccattgca |
1479483 |
T |
 |
| Q |
113 |
gagctgtgtgtaaaccaacggtttcccttagatcaacatcacataagggagcaaaccaatccgttttggaccgcacaaattcaccagcatcattcctaat |
212 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1479484 |
gagttgtgtgtaaaccaacggtttcccttagatcaacatcgcataagggagcaaaccaatccgttttggaccgcacaaattcaccagcatcattcctaat |
1479583 |
T |
 |
| Q |
213 |
gcatatttccaatcctaccatgttaagcaatgaagaaaatgatgcatcaatattacatttatacctgcccgctgccggctttttccatgtctccccttca |
312 |
Q |
| |
|
||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
1479584 |
gcatattcccaatcctacaatgttaagcaatgaagaaaatgatgcagcaatattacatttatacctgcccgctgccggttttttccatgtctccccttca |
1479683 |
T |
 |
| Q |
313 |
tgacttatatgtgcttgccttgctgtagttgtcctttcttc |
353 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1479684 |
tgacttatatgtgcttgccttgctgtagttgtcctttcttc |
1479724 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 13 - 281
Target Start/End: Complemental strand, 6969567 - 6969295
Alignment:
| Q |
13 |
tcactattatcatcttcataagaattaacatgatcaacaacttttttagaatctagagcgaagtccacgttgtcgaattgaaggtctgagatccattgca |
112 |
Q |
| |
|
||||||||||||||| || ||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||| |||| |||||||| |
|
|
| T |
6969567 |
tcactattatcatctatatcagaattaacatgatcaacaacttttttagaatccagagcaaagtctacgttgtcgaattgaaggtccgagacccattgca |
6969468 |
T |
 |
| Q |
113 |
gagctgtgtgtaaaccaacggtttcccttagatcaacatcacataagggagcaaaccaatccgttttggaccgcacaaattcaccagcatcattcctaat |
212 |
Q |
| |
|
||| |||||||||||||| || || || || |||||||||||| | ||||||||||||||||||||| | |||||||||||||| |||||||||||| || |
|
|
| T |
6969467 |
gagttgtgtgtaaaccaatggctttccctacatcaacatcacacaggggagcaaaccaatccgttttagcccgcacaaattcactagcatcattcctgat |
6969368 |
T |
 |
| Q |
213 |
gcatatttccaatcctaccatgttaagcaatgaagaaaatgatgcatca----atattacatttatacctgcc |
281 |
Q |
| |
|
||| |||||||||||||| |||||||||| ||| ||||| |||||||| |||||||||||||||||||| |
|
|
| T |
6969367 |
gcacatttccaatcctactttgttaagcaacgaaaaaaattatgcatcaatatatattacatttatacctgcc |
6969295 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 13 - 353
Target Start/End: Original strand, 49407227 - 49407553
Alignment:
| Q |
13 |
tcactattatcatcttcataagaattaacatgatcaacaacttttttagaatctagagcgaagtccacgttgtcgaattgaaggtctgagatccattgca |
112 |
Q |
| |
|
|||||||||| |||| || |||||||||||||| ||||||| |||||||||| || ||||||||||| |||| |||||||| |||||| | |||||| | |
|
|
| T |
49407227 |
tcactattataatctacaatagaattaacatgattaacaactcttttagaatccagtgcgaagtccacattgttgaattgaaagtctgacacccattgaa |
49407326 |
T |
 |
| Q |
113 |
gagctgtgtgtaaaccaacggtttcccttagatcaacatcacataagggagcaaaccaatccgttttggaccgcacaaatt-caccagcatcattcctaa |
211 |
Q |
| |
|
| || | ||||| || | |||||||||| | |||||||| |||||||||||||| | ||| |||| ||||||||||||| ||| |
|
|
| T |
49407327 |
gtgcagc---------------ttcccctacaacaacatcacacatgggagcaagccaatccgttttggccaacacgaatttcaccagcatcatttataa |
49407411 |
T |
 |
| Q |
212 |
tgcatatttccaatcctaccatgttaagcaatgaagaaaatgatgcatcaatattacatttatacctgcccgctgccggctttttccatgtctccccttc |
311 |
Q |
| |
|
|||| ||| |||| |||||| |||||||| | |||||||| ||| ||| || |||||||||| | || |||||| ||||||||||||| ||||| |||| |
|
|
| T |
49407412 |
tgcacattcccaagcctaccctgttaagcgacgaagaaaacgattaatcgatgttacatttatccatgtccgctgtcggctttttccatttctcctcttc |
49407511 |
T |
 |
| Q |
312 |
atgacttatatgtgcttgccttgctgtagttgtcctttcttc |
353 |
Q |
| |
|
|||| ||||| || |||| | | ||||||||| |||||||| |
|
|
| T |
49407512 |
atgatttataggtacttgtcgcgttgtagttgttctttcttc |
49407553 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 35 - 123
Target Start/End: Complemental strand, 1311040 - 1310952
Alignment:
| Q |
35 |
aattaacatgatcaacaacttttttagaatctagagcgaagtccacgttgtcgaattgaaggtctgagatccattgcagagctgtgtgt |
123 |
Q |
| |
|
|||||||||||||||||||| ||||||||| | ||||| |||||||||| |||||||||||| | | ||||| |||||||||||| |
|
|
| T |
1311040 |
aattaacatgatcaacaactcgtttagaatcaaaggcgaaatccacgttgttaaattgaaggtctaacactcattggagagctgtgtgt |
1310952 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 300
Target Start/End: Original strand, 9632009 - 9632063
Alignment:
| Q |
246 |
agaaaatgatgcatcaatattacatttatacctgcccgctgccggctttttccat |
300 |
Q |
| |
|
|||||| |||||||||||||||||||||||||| || | |||||| || |||||| |
|
|
| T |
9632009 |
agaaaaggatgcatcaatattacatttataccttccagatgccggtttcttccat |
9632063 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 168; Significance: 6e-90; HSPs: 6)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 58 - 353
Target Start/End: Complemental strand, 6860363 - 6860068
Alignment:
| Q |
58 |
ttagaatctagagcgaagtccacgttgtcgaattgaaggtctgagatccattgcagagctgtgtgtaaaccaacggtttcccttagatcaacatcacata |
157 |
Q |
| |
|
|||||||| | ||| ||||||| ||||||||||||||||||| ||| ||||| ||||||||||||||||||||||| ||||| || |||||||||||||| |
|
|
| T |
6860363 |
ttagaatccatagcaaagtccatgttgtcgaattgaaggtctaagacccattacagagctgtgtgtaaaccaacggcttcccctacatcaacatcacata |
6860264 |
T |
 |
| Q |
158 |
agggagcaaaccaatccgttttggaccgcacaaattcaccagcatcattcctaatgcatatttccaatcctaccatgttaagcaatgaagaaaatgatgc |
257 |
Q |
| |
|
|||||||||| |||| ||||||| |||| |||||||||||||||||| |||||||| ||| ||||||||||||||||||| | |||||||||||| | |
|
|
| T |
6860263 |
ggggagcaaactaatctgttttggcccgcctaaattcaccagcatcattactaatgcacattctcaatcctaccatgttaagcgaagaagaaaatgatac |
6860164 |
T |
 |
| Q |
258 |
atcaatattacatttatacctgcccgctgccggctttttccatgtctccccttcatgacttatatgtgcttgccttgctgtagttgtcctttcttc |
353 |
Q |
| |
|
|||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||| ||| | ||||||||| |||||||| |
|
|
| T |
6860163 |
atcattataacatttatacctgcccgctgccggttttttccatgtctccccttcatgatttataggtgcttacctcgttgtagttgttctttcttc |
6860068 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 38 - 300
Target Start/End: Complemental strand, 10943406 - 10943146
Alignment:
| Q |
38 |
taacatgatcaacaacttttttagaatctagagcgaagtccacgttgtcgaattgaaggtctgagatccattgcagagctgtgtgtaaaccaacggtttc |
137 |
Q |
| |
|
||||||||||||||||| |||||||| || ||||||||||| |||| ||||||||||||| | | |||||||||||||||||||||| | ||| || |
|
|
| T |
10943406 |
taacatgatcaacaactcatttagaataaagggcgaagtccacattgttgaattgaaggtctaacacccattgcagagctgtgtgtaaagctacgacctc |
10943307 |
T |
 |
| Q |
138 |
ccttagatcaacatcacataagggagcaaaccaatccgttttggaccgcacaaattcaccagcatcattcctaatgcatatttccaatcctaccatgtta |
237 |
Q |
| |
|
| | |||||||||||| | |||||||||| |||||||||||| | ||||||||||||| |||||| |||||| || ||| | || |||||| ||||| |
|
|
| T |
10943306 |
caccacatcaacatcacacaggggagcaaactaatccgttttggccaacacaaattcaccaacatcatacctaatacacattccaaagcctaccttgtta |
10943207 |
T |
 |
| Q |
238 |
agcaatgaagaaaatgatgcatcaatattacatttatacctgcccgctgccggctttttccat |
300 |
Q |
| |
|
||| | ||| || ||||| |||| ||||||||| ||| || ||||||||| |||||||| |
|
|
| T |
10943206 |
agcgacatagagaaggatgc--caatgttacatttacacccgctagctgccggccttttccat |
10943146 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 38 - 300
Target Start/End: Complemental strand, 10949275 - 10949015
Alignment:
| Q |
38 |
taacatgatcaacaacttttttagaatctagagcgaagtccacgttgtcgaattgaaggtctgagatccattgcagagctgtgtgtaaaccaacggtttc |
137 |
Q |
| |
|
||||||||||||||||| |||||||| || ||||||||||| |||| ||||||||||||| | | |||||||||||||||||||||| | ||| || |
|
|
| T |
10949275 |
taacatgatcaacaactcatttagaataaagggcgaagtccacattgttgaattgaaggtctaacacccattgcagagctgtgtgtaaagctacgacctc |
10949176 |
T |
 |
| Q |
138 |
ccttagatcaacatcacataagggagcaaaccaatccgttttggaccgcacaaattcaccagcatcattcctaatgcatatttccaatcctaccatgtta |
237 |
Q |
| |
|
| | |||||||||||| | |||||||||| |||||||||||| | ||||||||||||| |||||| |||||| || ||| | || |||||| ||||| |
|
|
| T |
10949175 |
caccacatcaacatcacacaggggagcaaactaatccgttttggccaacacaaattcaccaacatcatacctaatacacattccaaagcctaccttgtta |
10949076 |
T |
 |
| Q |
238 |
agcaatgaagaaaatgatgcatcaatattacatttatacctgcccgctgccggctttttccat |
300 |
Q |
| |
|
||| | ||| || ||||| |||| ||||||||| ||| || ||||||||| |||||||| |
|
|
| T |
10949075 |
agcgacatagagaaggatgc--caatgttacatttacacccgctagctgccggccttttccat |
10949015 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 13 - 99
Target Start/End: Complemental strand, 6860460 - 6860374
Alignment:
| Q |
13 |
tcactattatcatcttcataagaattaacatgatcaacaacttttttagaatctagagcgaagtccacgttgtcgaattgaaggtct |
99 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||| |||||||||| | ||| ||||||| ||||||||||||||||||| |
|
|
| T |
6860460 |
tcactattatcatcttcatcagaattaacatgatcaacaactcttttagaatccatagcaaagtccatgttgtcgaattgaaggtct |
6860374 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 275
Target Start/End: Original strand, 12555663 - 12555778
Alignment:
| Q |
160 |
ggagcaaaccaatccgttttggaccgcacaaattcaccagcatcattcctaatgcatatttccaatcctaccatgttaagcaatgaagaaaatgatgcat |
259 |
Q |
| |
|
|||||||||||| ||||||| | | || || |||||| ||||||| ||||| || || |||| ||||||||||||||| |||||||||| || |||| |
|
|
| T |
12555663 |
ggagcaaaccaagccgttttagcaagaacgaactcaccaacatcatttctaatacacatccccaagcctaccatgttaagcgatgaagaaaaggaggcat |
12555762 |
T |
 |
| Q |
260 |
caatattacatttata |
275 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
12555763 |
aaatattacatttata |
12555778 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 299
Target Start/End: Complemental strand, 10977481 - 10977429
Alignment:
| Q |
247 |
gaaaatgatgcatcaatattacatttatacctgcccgctgccggctttttcca |
299 |
Q |
| |
|
||||||||||||||||| || |||||||||||||| | ||||||||| ||||| |
|
|
| T |
10977481 |
gaaaatgatgcatcaatgttgcatttatacctgccagatgccggcttcttcca |
10977429 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 150; Significance: 3e-79; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 13 - 349
Target Start/End: Complemental strand, 33315113 - 33314793
Alignment:
| Q |
13 |
tcactattatcatcttcataagaattaacatgatcaacaacttttttagaatctagagcgaagtccacgttgtcgaattgaaggtctgagatccattgca |
112 |
Q |
| |
|
||||||||||| ||||||| |||| |||||| ||||||||| |||||||||| ||||||||||||||||||||||||||| |||||| |
|
|
| T |
33315113 |
tcactattatcgtcttcattagaacaaacatggtcaacaactcttttagaatc------gaagtccacgttgtcgaattgaaggtc--------attgca |
33315028 |
T |
 |
| Q |
113 |
gagctgtgtgtaaaccaacggtttcccttagatcaacatcacataagggagcaaaccaatccgttttggaccgcacaaattcaccagcatcattcctaat |
212 |
Q |
| |
|
||||||||| ||||||||| ||||| | |||||||| ||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |
|
|
| T |
33315027 |
gagctgtgt--aaaccaacgacttccccgacatcaacattacagaagggagcaaaccaatctattttggcccgcacaaattcaccagcatcattcctaat |
33314930 |
T |
 |
| Q |
213 |
gcatatttccaatcctaccatgttaagcaatgaagaaaatgatgcatcaatattacatttatacctgcccgctgccggctttttccatgtctccccttca |
312 |
Q |
| |
|
|| ||| ||||||||||| || ||| | | |||||||||||| ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
33314929 |
ccacattcccaatcctaccctgataaacgacgaagaaaatgatccatcaatgttacatttatacctgcccgttgccggctttttccatgtctccccttca |
33314830 |
T |
 |
| Q |
313 |
tgacttatatgtgcttgccttgctgtagttgtccttt |
349 |
Q |
| |
|
||||||||| |||||||||| | ||||||||| |||| |
|
|
| T |
33314829 |
tgacttataggtgcttgcctcgttgtagttgttcttt |
33314793 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 101
Target Start/End: Complemental strand, 39839993 - 39839937
Alignment:
| Q |
45 |
atcaacaacttttttagaatctagagcgaagtccacgttgtcgaattgaaggtctga |
101 |
Q |
| |
|
|||||||| |||||||||||| ||| | || |||| ||||||||||||||| ||||| |
|
|
| T |
39839993 |
atcaacaatttttttagaatcaagaacaaaatccatgttgtcgaattgaagatctga |
39839937 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 108; Significance: 4e-54; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 45 - 296
Target Start/End: Original strand, 24329422 - 24329673
Alignment:
| Q |
45 |
atcaacaacttttttagaatctagagcgaagtccacgttgtcgaattgaaggtctgagatccattgcagagctgtgtgtaaaccaacggtttcccttaga |
144 |
Q |
| |
|
|||||||||| |||||||||| || || ||||| || |||||||||||||||| ||| | ||||||||| |||||||||| |||||||| ||||| ||| |
|
|
| T |
24329422 |
atcaacaactcttttagaatccagtgcaaagtcaacattgtcgaattgaaggtttgacacccattgcagcgctgtgtgtagaccaacggcttcccccaga |
24329521 |
T |
 |
| Q |
145 |
tcaacatcacataagggagcaaaccaatccgttttggaccgcacaaattcaccagcatcattcctaatgcatatttccaatcctaccatgttaagcaatg |
244 |
Q |
| |
|
||||||||||| | |||||||||||||||||||||| | |||||||||| | |||||||||||||||| ||| |||| | ||||||| ||| | | |
|
|
| T |
24329522 |
tcaacatcacacagtggagcaaaccaatccgttttggccagcacaaattccctgacatcattcctaatgcacattcccaagcaatccatgtttagcgacg |
24329621 |
T |
 |
| Q |
245 |
aagaaaatgatgcatcaatattacatttatacctgcccgctgccggcttttt |
296 |
Q |
| |
|
||||||| || |||||||| ||||||||||||||||| |||||||||||||| |
|
|
| T |
24329622 |
aagaaaaagacgcatcaatgttacatttatacctgccagctgccggcttttt |
24329673 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 13 - 321
Target Start/End: Original strand, 31957146 - 31957457
Alignment:
| Q |
13 |
tcactattatcatcttcataagaattaacatgatcaacaacttttttagaatctagagcgaagtccacgttgtcgaattgaaggtctgagatccattgca |
112 |
Q |
| |
|
|||||||| |||||| ||| | ||||||| |||||||||||| |||||||||| || | |||||||| |||||||||||||||||| | | |||||| | |
|
|
| T |
31957146 |
tcactattgtcatctacatcaaaattaacgtgatcaacaactgttttagaatcaaggacaaagtccacattgtcgaattgaaggtctaacacccattgta |
31957245 |
T |
 |
| Q |
113 |
gagctgtgtgtaaaccaacggtttccctt-agatcaac--atcacataagggagcaaaccaatccgttttggaccgcacaaattcaccagcatcattcct |
209 |
Q |
| |
|
||||||||| |||||| | | |||| | |||||| |||||| | ||||||||||||||| ||||||| | || ||||||||||||||||||||| |
|
|
| T |
31957246 |
gagctgtgtataaacctatgacctccccccacatcaacgcatcacacaggggagcaaaccaatctgttttggccaacataaattcaccagcatcattcct |
31957345 |
T |
 |
| Q |
210 |
aatgcatatttccaatcctaccatgttaagcaatgaagaaaatgatgcatcaatattacatttatacctgcccgctgccggctttttccatgtctcccct |
309 |
Q |
| |
|
||| || ||| |||| |||||| ||||||| ||| ||| || || |||||||| ||||||||||||| | |||||| |||||||| || | ||| || |
|
|
| T |
31957346 |
aatacacattcccaagcctaccttgttaagtgatggagagaaggaggcatcaatgttacatttataccagtgagctgcctgctttttctatttatcctct |
31957445 |
T |
 |
| Q |
310 |
tcatgacttata |
321 |
Q |
| |
|
|||||||||||| |
|
|
| T |
31957446 |
tcatgacttata |
31957457 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 299
Target Start/End: Original strand, 26731257 - 26731310
Alignment:
| Q |
246 |
agaaaatgatgcatcaatattacatttatacctgcccgctgccggctttttcca |
299 |
Q |
| |
|
|||||||||||||||||| || |||||||||||||| | |||||| || ||||| |
|
|
| T |
26731257 |
agaaaatgatgcatcaatgttgcatttatacctgccaggtgccggtttcttcca |
26731310 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 278
Target Start/End: Complemental strand, 11453708 - 11453676
Alignment:
| Q |
246 |
agaaaatgatgcatcaatattacatttatacct |
278 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| |
|
|
| T |
11453708 |
agaaaatgaagcatcaatattacatttatacct |
11453676 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 281
Target Start/End: Original strand, 12715216 - 12715268
Alignment:
| Q |
229 |
accatgttaagcaatgaagaaaatgatgcatcaatattacatttatacctgcc |
281 |
Q |
| |
|
|||||||| || |||| |||||||| ||||||||||||||||| |||||||| |
|
|
| T |
12715216 |
accatgtttagggatgaggaaaatgaggcatcaatattacatttgtacctgcc |
12715268 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 281
Target Start/End: Original strand, 12776447 - 12776499
Alignment:
| Q |
229 |
accatgttaagcaatgaagaaaatgatgcatcaatattacatttatacctgcc |
281 |
Q |
| |
|
|||||||| || |||| |||||||| ||||||||||||||||| |||||||| |
|
|
| T |
12776447 |
accatgtttagggatgaggaaaatgaggcatcaatattacatttgtacctgcc |
12776499 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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