View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17740_low_4 (Length: 338)
Name: NF17740_low_4
Description: NF17740
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17740_low_4 |
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Alignment Details
Target: chr3 (Bit Score: 308; Significance: 1e-173; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 16 - 323
Target Start/End: Original strand, 32061047 - 32061354
Alignment:
| Q |
16 |
atcaagcatatgctctttactacgagaagagtaagaattatgatgaggcagagaaaatgtatcatatgggagttaagaagtaagttctttgctctattta |
115 |
Q |
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| T |
32061047 |
atcaagcatatgctctttactacgagaagagtaagaattatgatgaggcagagaaaatgtatcatatgggagttaagaagtaagttctttgctctattta |
32061146 |
T |
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| Q |
116 |
cggatcctgttcaatttattcttgtgttttgatgcttgtttttaggaaataggaacataaaaacttgctccgaattttgattagattatgcttgaaattt |
215 |
Q |
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| T |
32061147 |
cggatcctgttcaatttattcttgtgttttgatgcttgtttttaggaaataggaacataaaaacttgctccgaattttgattagattatgcttgaaattt |
32061246 |
T |
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| Q |
216 |
gttgcatgcattgttttcaattagcagattggcacaacaaatgtctatctagttctttgattgttatgagttttatttttgtccaaaatcctcacaagtt |
315 |
Q |
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| T |
32061247 |
gttgcatgcattgttttcaattagcagattggcacaacaaatgtctatctagttctttgattgttatgagttttatttttgtccaaaatcctcacaagtt |
32061346 |
T |
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| Q |
316 |
gtgtttac |
323 |
Q |
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|||||||| |
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| T |
32061347 |
gtgtttac |
32061354 |
T |
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