View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17742_high_37 (Length: 237)
Name: NF17742_high_37
Description: NF17742
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17742_high_37 |
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Alignment Details
Target: chr7 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 48695888 - 48695660
Alignment:
| Q |
1 |
atggcaaagagtgcacttgtatggcccgtgtgtgagtgagagagagag--------ggccaagaagacggtggtcacagacagaagacagtaccatttta |
92 |
Q |
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| T |
48695888 |
atggcaaagagtgcacttgtatggcccgtgtgtgagtgagagagagagagagagagggccaagaagacggtggtcacagacagaagacagtaccatttta |
48695789 |
T |
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| Q |
93 |
ttttggttcttgtttacaacggtcagcatagttacttcctggtttgttttaaatttaattttctattctcagagtatttgtataatgtacaactttgatt |
192 |
Q |
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||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
48695788 |
ttttggttcttgtttacaatggtcagcacagttacttcctggtttgttttaaatttaattttctattctcagagtatttgtataatatacaactttgatt |
48695689 |
T |
|
| Q |
193 |
gattgattgctgctgcctcagtttgggcg |
221 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
48695688 |
gattgattgctgctgcctcagtttgggcg |
48695660 |
T |
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