View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17742_low_58 (Length: 253)
Name: NF17742_low_58
Description: NF17742
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17742_low_58 |
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Alignment Details
Target: chr1 (Bit Score: 101; Significance: 4e-50; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 136 - 236
Target Start/End: Complemental strand, 50409866 - 50409766
Alignment:
| Q |
136 |
cctaacatttctagcgagatcaacaaatgaaggaatagagagaatgtaccgtcgctgaaatcgctgaactcgctgtcatcgctatcgacgtcagcggctt |
235 |
Q |
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| T |
50409866 |
cctaacatttctagcgagatcaacaaatgaaggaatagagagaatgtaccgtcgctgaaatcgctgaactcgctgtcatcgctatcgacgtcagcggctt |
50409767 |
T |
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| Q |
236 |
c |
236 |
Q |
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| T |
50409766 |
c |
50409766 |
T |
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