View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17742_low_60 (Length: 246)
Name: NF17742_low_60
Description: NF17742
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17742_low_60 |
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Alignment Details
Target: chr2 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 15 - 239
Target Start/End: Original strand, 37544246 - 37544470
Alignment:
| Q |
15 |
gtcctgaccgtcatcttcaccaccatttcaatttatgaaatctatacttgaggtgggttcttcatccaaatcccctcctatgcatgagtgtgattcggtt |
114 |
Q |
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| T |
37544246 |
gtcctgaccgtcatcttcaccgccatttcaatttatgaaatctatacttgaggtgggttcttcatccaaatcccctcctatgcatgagtgtgatttggtt |
37544345 |
T |
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| Q |
115 |
ttaaattagagattttgaataacaagcagtggttttcatgattcttgagtataatgggtagaggggagaggaacctgtcatatcatgcattcacttgcta |
214 |
Q |
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||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
37544346 |
ttaaattagagattttgaataacaaacagtggttttcatgattcttgagtataatgggtagaggggagaggaacctgtcatatcatgcactcacttgcta |
37544445 |
T |
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| Q |
215 |
attggttaaattagtgtgatgatgt |
239 |
Q |
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| T |
37544446 |
attggttaaattagtgtgatgatgt |
37544470 |
T |
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