View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17743_high_13 (Length: 426)
Name: NF17743_high_13
Description: NF17743
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17743_high_13 |
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Alignment Details
Target: chr1 (Bit Score: 391; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 391; E-Value: 0
Query Start/End: Original strand, 1 - 407
Target Start/End: Original strand, 37338738 - 37339144
Alignment:
| Q |
1 |
atagaaagtctataaaatgtaatgttacaatggatgaaagtatttacaatgatgcatatagcatgacagaaagcagggatgtcatttcatttacatttaa |
100 |
Q |
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| T |
37338738 |
atagaaagtctataaaatgtaatgttacaatggatgaaagtatttacaatgatgcatatagcatgacagaaagcagggatgtcatttcatttacatttaa |
37338837 |
T |
|
| Q |
101 |
atctccattgaggaaaaatgcatctcagtcgcagtcgactactaagcaagtgatggaaacaaggaccagaattgatgtcgattcttttcttcacgttgat |
200 |
Q |
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| T |
37338838 |
atctccattgaggaaaaatgcatctcagtcgcagtcgactactaagcaagtgatggaaacaaggaccagaattgatgtcgattcttttcttcatgttgat |
37338937 |
T |
|
| Q |
201 |
aaggtttatcctaccaggttacatgtaatggatgttgatacattaagtgtcatgttatctcacattaacccacctcaatgtaccttggaaatagaagggt |
300 |
Q |
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| T |
37338938 |
aaggtttatcctaccaggttacatgtaatggatgttgatacattaagtgtcatgttatctcacattaacccacctcaatgtaccttggaaatagaaaggt |
37339037 |
T |
|
| Q |
301 |
gttctgatgattttgaatctatttcggaagatagatttaacaacattgcatgtaacacatcaagggaacatgacaatttctttcacctgaacctgcttag |
400 |
Q |
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| T |
37339038 |
gttctgatgattttgaatctatttcggaagatagatttaacaacatggcatgcaacacatcaagggaacatgacaatttctttcacctgaacctgcttag |
37339137 |
T |
|
| Q |
401 |
tgataaa |
407 |
Q |
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||||||| |
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| T |
37339138 |
tgataaa |
37339144 |
T |
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