View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17743_high_23 (Length: 265)
Name: NF17743_high_23
Description: NF17743
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17743_high_23 |
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Alignment Details
Target: chr3 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 18 - 249
Target Start/End: Original strand, 28209604 - 28209835
Alignment:
| Q |
18 |
aacattttcatcatttgttgtcattgtcatatccaaatttgtgtcatttttaggcacttgagagaatcctttaactttagtcctacctaataagacatca |
117 |
Q |
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| T |
28209604 |
aacattttcatcatttgttgtcattgtcatatccaaatttgtgtcatttttaggcacctgagagaatcctttaactttagtcctacctaataagacatca |
28209703 |
T |
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| Q |
118 |
ttactgattacctctacaaaaagaggaccatacaaaagttttaactcttcattcttgtttgagaatcttaaacccaaatttattattgcatccatttttt |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
28209704 |
ttactgattacctctacaaaaagaggaccatacaaaagttttaactcttcattcttgtttgagaatcttaaacccagatttattattgcatccatttttt |
28209803 |
T |
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| Q |
218 |
gtgagctagaatccacttgtaactttgtcatg |
249 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
28209804 |
gtgagctagaatccacttgtaactttgtcatg |
28209835 |
T |
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