View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17743_low_10 (Length: 515)

Name: NF17743_low_10
Description: NF17743
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17743_low_10
NF17743_low_10
[»] chr8 (47 HSPs)
chr8 (252-498)||(30338459-30338686)
chr8 (39-140)||(5513981-5514083)
chr8 (39-139)||(10006344-10006446)
chr8 (39-146)||(12353360-12353467)
chr8 (41-144)||(22221365-22221470)
chr8 (41-144)||(22227707-22227812)
chr8 (39-130)||(18978029-18978121)
chr8 (39-140)||(10007762-10007865)
chr8 (39-130)||(18970920-18971012)
chr8 (39-122)||(24488679-24488762)
chr8 (66-136)||(29968364-29968434)
chr8 (64-150)||(32207350-32207435)
chr8 (45-141)||(5003103-5003199)
chr8 (39-141)||(8388462-8388564)
chr8 (46-134)||(1824084-1824174)
chr8 (46-134)||(1858529-1858619)
chr8 (46-141)||(12351919-12352016)
chr8 (64-140)||(24122882-24122958)
chr8 (39-141)||(30335637-30335741)
chr8 (64-147)||(38980069-38980153)
chr8 (64-147)||(39011166-39011250)
chr8 (39-136)||(11287779-11287878)
chr8 (64-138)||(18979145-18979220)
chr8 (39-139)||(22220388-22220490)
chr8 (83-139)||(24483143-24483200)
chr8 (64-140)||(32968455-32968532)
chr8 (65-144)||(1823547-1823627)
chr8 (65-144)||(1857992-1858072)
chr8 (84-140)||(19391387-19391443)
chr8 (64-139)||(32973961-32974037)
chr8 (64-139)||(38974795-38974871)
chr8 (64-139)||(39005893-39005969)
chr8 (39-140)||(24123897-24123997)
chr8 (84-141)||(5192270-5192328)
chr8 (84-140)||(4518868-4518925)
chr8 (84-140)||(4807599-4807656)
chr8 (84-140)||(11456637-11456694)
chr8 (74-139)||(23170034-23170098)
chr8 (84-140)||(44147218-44147275)
chr8 (87-139)||(3819489-3819541)
chr8 (82-140)||(11288902-11288962)
chr8 (91-142)||(45114568-45114620)
chr8 (39-136)||(11282011-11282110)
chr8 (204-235)||(30338410-30338441)
chr8 (39-140)||(5514270-5514371)
chr8 (84-140)||(33895621-33895678)
chr8 (84-144)||(36249547-36249608)
[»] chr5 (37 HSPs)
chr5 (252-496)||(23915469-23915733)
chr5 (39-142)||(19752909-19753013)
chr5 (39-140)||(5778835-5778938)
chr5 (39-140)||(5777900-5778001)
chr5 (39-140)||(25523068-25523171)
chr5 (41-151)||(22940624-22940738)
chr5 (39-140)||(18486901-18487004)
chr5 (39-140)||(28538675-28538778)
chr5 (65-140)||(5730440-5730517)
chr5 (64-145)||(18485132-18485214)
chr5 (39-150)||(28539819-28539931)
chr5 (39-140)||(19754129-19754233)
chr5 (39-141)||(36486487-36486591)
chr5 (46-139)||(25056387-25056482)
chr5 (39-139)||(20214196-20214297)
chr5 (39-140)||(16650854-16650957)
chr5 (39-147)||(1015476-1015586)
chr5 (65-111)||(5730888-5730934)
chr5 (64-141)||(33158096-33158174)
chr5 (84-140)||(18695250-18695307)
chr5 (39-142)||(24332910-24333015)
chr5 (84-141)||(25556875-25556932)
chr5 (80-140)||(33160327-33160388)
chr5 (39-150)||(21835030-21835142)
chr5 (39-136)||(20216762-20216861)
chr5 (39-140)||(25055411-25055514)
chr5 (64-140)||(25524152-25524230)
chr5 (87-140)||(23765419-23765473)
chr5 (87-140)||(23815267-23815321)
chr5 (39-136)||(42195137-42195234)
chr5 (84-140)||(31055314-31055371)
chr5 (84-143)||(24025017-24025077)
chr5 (39-149)||(40255671-40255783)
chr5 (39-99)||(25524097-25524158)
chr5 (66-119)||(34893686-34893739)
chr5 (84-136)||(40428642-40428695)
chr5 (84-151)||(245842-245910)
[»] chr6 (33 HSPs)
chr6 (252-496)||(18989789-18990053)
chr6 (38-140)||(27322066-27322169)
chr6 (38-140)||(27318314-27318419)
chr6 (39-140)||(8659264-8659367)
chr6 (47-140)||(8821872-8821967)
chr6 (65-148)||(3721603-3721687)
chr6 (39-139)||(7314880-7314981)
chr6 (47-143)||(8660211-8660308)
chr6 (65-140)||(3722533-3722609)
chr6 (45-139)||(8822798-8822894)
chr6 (39-140)||(7316293-7316396)
chr6 (39-136)||(34834578-34834677)
chr6 (64-140)||(16704522-16704599)
chr6 (39-136)||(1829602-1829701)
chr6 (64-140)||(6842308-6842385)
chr6 (39-140)||(10784591-10784695)
chr6 (46-122)||(34830920-34830997)
chr6 (39-126)||(10785912-10786000)
chr6 (92-139)||(16703570-16703616)
chr6 (83-145)||(378495-378557)
chr6 (39-148)||(26575053-26575162)
chr6 (39-150)||(3333025-3333138)
chr6 (84-140)||(35102490-35102547)
chr6 (84-141)||(18791605-18791664)
chr6 (39-140)||(27437827-27437930)
chr6 (48-140)||(14822359-14822453)
chr6 (39-140)||(26574618-26574720)
chr6 (84-136)||(4597408-4597461)
chr6 (84-140)||(18749096-18749153)
chr6 (203-235)||(11694242-11694274)
chr6 (84-131)||(14572186-14572234)
chr6 (48-140)||(14823583-14823678)
chr6 (84-151)||(32451714-32451782)
[»] chr4 (52 HSPs)
chr4 (38-142)||(14868887-14868991)
chr4 (38-142)||(14876943-14877047)
chr4 (43-151)||(49308031-49308139)
chr4 (39-140)||(5526125-5526227)
chr4 (39-139)||(10471387-10471489)
chr4 (39-143)||(5525356-5525461)
chr4 (39-137)||(19750574-19750673)
chr4 (39-137)||(19789133-19789232)
chr4 (39-140)||(25685821-25685924)
chr4 (39-140)||(1290197-1290300)
chr4 (39-140)||(48780247-48780350)
chr4 (39-139)||(25684934-25685036)
chr4 (39-141)||(10470544-10470648)
chr4 (41-140)||(17388212-17388312)
chr4 (39-140)||(1963195-1963298)
chr4 (46-140)||(13386013-13386111)
chr4 (39-142)||(13386531-13386637)
chr4 (39-145)||(17382987-17383094)
chr4 (39-140)||(1835101-1835204)
chr4 (39-142)||(31599786-31599891)
chr4 (39-139)||(10447006-10447109)
chr4 (64-140)||(26421647-26421723)
chr4 (39-140)||(13509358-13509460)
chr4 (39-150)||(48781045-48781157)
chr4 (64-142)||(3928883-3928962)
chr4 (39-136)||(12129626-12129725)
chr4 (64-141)||(8758862-8758940)
chr4 (39-139)||(31600984-31601086)
chr4 (39-139)||(1834119-1834222)
chr4 (64-140)||(8757674-8757750)
chr4 (39-136)||(8155741-8155839)
chr4 (64-140)||(49306774-49306850)
chr4 (84-142)||(25011982-25012041)
chr4 (84-150)||(47869901-47869968)
chr4 (200-234)||(1688188-1688222)
chr4 (64-141)||(3927664-3927742)
chr4 (87-142)||(15058817-15058873)
chr4 (80-136)||(35934347-35934402)
chr4 (46-136)||(35935539-35935631)
chr4 (39-140)||(52491606-52491709)
chr4 (39-139)||(1964440-1964542)
chr4 (13-43)||(14869003-14869033)
chr4 (13-43)||(14876901-14876931)
chr4 (39-140)||(21177996-21178098)
chr4 (84-136)||(4357499-4357552)
chr4 (84-140)||(13826419-13826476)
chr4 (39-150)||(21539070-21539183)
chr4 (84-140)||(43793630-43793687)
chr4 (84-139)||(13394536-13394592)
chr4 (84-139)||(13397675-13397731)
chr4 (84-147)||(13397923-13397987)
chr4 (64-136)||(37728590-37728662)
[»] chr3 (61 HSPs)
chr3 (38-140)||(5029681-5029784)
chr3 (58-150)||(5001189-5001282)
chr3 (39-148)||(47610579-47610690)
chr3 (39-139)||(51469972-51470074)
chr3 (39-150)||(22776811-22776924)
chr3 (39-140)||(47609696-47609799)
chr3 (39-142)||(54540789-54540894)
chr3 (39-149)||(12703499-12703610)
chr3 (39-139)||(47614185-47614287)
chr3 (64-140)||(12700174-12700249)
chr3 (46-136)||(7267647-7267738)
chr3 (39-140)||(29931225-29931328)
chr3 (39-140)||(29980379-29980482)
chr3 (65-140)||(51470481-51470556)
chr3 (40-140)||(7758401-7758503)
chr3 (39-150)||(29932698-29932810)
chr3 (39-150)||(29981852-29981964)
chr3 (39-141)||(55191994-55192097)
chr3 (46-147)||(8456470-8456572)
chr3 (39-139)||(52840603-52840705)
chr3 (64-140)||(19984848-19984925)
chr3 (64-145)||(28262187-28262268)
chr3 (39-139)||(51037536-51037637)
chr3 (80-136)||(7268868-7268924)
chr3 (35-141)||(24516458-24516566)
chr3 (82-140)||(47615591-47615650)
chr3 (64-140)||(52281572-52281649)
chr3 (45-139)||(535787-535883)
chr3 (84-147)||(3328805-3328869)
chr3 (64-141)||(54539753-54539831)
chr3 (83-140)||(11671385-11671442)
chr3 (84-140)||(22447739-22447796)
chr3 (64-140)||(52276303-52276380)
chr3 (39-142)||(52839034-52839139)
chr3 (46-140)||(534498-534594)
chr3 (84-139)||(27852753-27852809)
chr3 (39-141)||(46721219-46721323)
chr3 (64-139)||(18456088-18456165)
chr3 (84-142)||(20001956-20002014)
chr3 (86-132)||(22775783-22775829)
chr3 (84-140)||(22500595-22500652)
chr3 (84-140)||(26628024-26628081)
chr3 (84-140)||(28173728-28173785)
chr3 (64-140)||(28263136-28263213)
chr3 (84-139)||(8338940-8338996)
chr3 (84-139)||(28154882-28154938)
chr3 (64-147)||(51038815-51038899)
chr3 (39-113)||(31645000-31645075)
chr3 (13-43)||(5001320-5001350)
chr3 (13-43)||(5029639-5029669)
chr3 (64-143)||(18442626-18442707)
chr3 (64-143)||(19487700-19487781)
chr3 (87-140)||(19986120-19986174)
chr3 (87-140)||(25179826-25179880)
chr3 (87-140)||(32960644-32960698)
chr3 (66-139)||(49216247-49216321)
chr3 (84-140)||(13081142-13081199)
chr3 (84-140)||(34878528-34878585)
chr3 (84-140)||(46673044-46673101)
chr3 (84-155)||(4775834-4775906)
chr3 (64-139)||(46719941-46720017)
[»] chr7 (38 HSPs)
chr7 (66-140)||(34174010-34174084)
chr7 (45-140)||(127336-127431)
chr7 (45-140)||(17782558-17782655)
chr7 (39-140)||(3227593-3227696)
chr7 (39-140)||(31949321-31949424)
chr7 (39-138)||(3227109-3227209)
chr7 (39-137)||(17781663-17781763)
chr7 (39-139)||(47525366-47525468)
chr7 (39-140)||(7501851-7501954)
chr7 (39-140)||(31949801-31949904)
chr7 (39-142)||(7500452-7500556)
chr7 (40-126)||(18372457-18372544)
chr7 (66-132)||(47524532-47524599)
chr7 (47-139)||(18371424-18371518)
chr7 (39-142)||(128600-128705)
chr7 (39-139)||(31659622-31659725)
chr7 (84-150)||(8527042-8527109)
chr7 (40-140)||(22630452-22630554)
chr7 (40-146)||(11658372-11658480)
chr7 (39-134)||(14999154-14999249)
chr7 (84-148)||(20636866-20636931)
chr7 (68-147)||(20163585-20163665)
chr7 (39-136)||(42886285-42886384)
chr7 (39-140)||(21505415-21505516)
chr7 (39-112)||(22629514-22629588)
chr7 (39-141)||(11662550-11662654)
chr7 (39-148)||(47369772-47369883)
chr7 (84-141)||(27869194-27869252)
chr7 (84-141)||(42271580-42271638)
chr7 (84-139)||(36746751-36746806)
chr7 (84-141)||(3562431-3562489)
chr7 (84-141)||(19195212-19195270)
chr7 (87-140)||(21690415-21690469)
chr7 (82-140)||(14998007-14998067)
chr7 (84-140)||(24597516-24597573)
chr7 (85-140)||(5490924-5490980)
chr7 (84-140)||(21224353-21224409)
chr7 (84-147)||(39182181-39182245)
[»] chr1 (44 HSPs)
chr1 (39-150)||(52827336-52827449)
chr1 (39-139)||(41364829-41364930)
chr1 (39-136)||(45149969-45150068)
chr1 (140-201)||(26371972-26372033)
chr1 (39-147)||(41366130-41366239)
chr1 (39-136)||(52828069-52828168)
chr1 (39-139)||(39699766-39699867)
chr1 (64-140)||(14999284-14999360)
chr1 (39-140)||(24422799-24422902)
chr1 (64-143)||(45157234-45157313)
chr1 (39-136)||(7983053-7983151)
chr1 (39-148)||(35594208-35594317)
chr1 (64-141)||(52274966-52275044)
chr1 (39-147)||(37526877-37526986)
chr1 (39-150)||(51684355-51684468)
chr1 (39-141)||(24426074-24426178)
chr1 (39-140)||(51685764-51685867)
chr1 (39-139)||(36613903-36614005)
chr1 (39-139)||(45148581-45148682)
chr1 (39-142)||(33088616-33088721)
chr1 (41-136)||(43058789-43058885)
chr1 (39-140)||(23980465-23980568)
chr1 (64-140)||(11437224-11437301)
chr1 (39-154)||(50680319-50680433)
chr1 (64-140)||(7674527-7674602)
chr1 (39-149)||(11436032-11436144)
chr1 (39-140)||(35067001-35067104)
chr1 (67-139)||(39222501-39222575)
chr1 (84-141)||(4059520-4059578)
chr1 (46-147)||(39698555-39698657)
chr1 (39-142)||(39153115-39153220)
chr1 (39-143)||(43378712-43378817)
chr1 (84-140)||(46432215-46432272)
chr1 (39-140)||(35595191-35595295)
chr1 (39-141)||(36612851-36612954)
chr1 (87-141)||(24750020-24750075)
chr1 (64-142)||(44404439-44404518)
chr1 (84-138)||(48471864-48471919)
chr1 (39-140)||(7675458-7675560)
chr1 (64-126)||(39151945-39152007)
chr1 (84-140)||(51719122-51719179)
chr1 (79-142)||(14999995-15000059)
chr1 (84-139)||(24962201-24962257)
chr1 (73-136)||(52276197-52276261)
[»] chr2 (36 HSPs)
chr2 (39-148)||(36449769-36449880)
chr2 (39-150)||(38840492-38840605)
chr2 (46-139)||(1034475-1034570)
chr2 (39-136)||(28617926-28618023)
chr2 (39-141)||(22848189-22848293)
chr2 (44-140)||(7899886-7899984)
chr2 (47-140)||(18905995-18906089)
chr2 (41-140)||(18904366-18904467)
chr2 (64-143)||(802616-802695)
chr2 (39-136)||(36450920-36451018)
chr2 (39-142)||(11258810-11258915)
chr2 (39-140)||(18797245-18797349)
chr2 (39-147)||(18300724-18300831)
chr2 (47-140)||(11938796-11938890)
chr2 (39-140)||(23869534-23869636)
chr2 (64-140)||(18868923-18869000)
chr2 (39-141)||(22587953-22588056)
chr2 (82-141)||(21837298-21837356)
chr2 (39-140)||(38839241-38839344)
chr2 (39-139)||(18299373-18299475)
chr2 (39-139)||(41878092-41878196)
chr2 (64-140)||(41879237-41879314)
chr2 (74-138)||(1033212-1033275)
chr2 (47-138)||(13030293-13030383)
chr2 (64-147)||(32739615-32739699)
chr2 (39-136)||(7898694-7898793)
chr2 (39-141)||(13567970-13568072)
chr2 (64-141)||(24475223-24475300)
chr2 (84-140)||(30714274-30714331)
chr2 (84-139)||(9787805-9787861)
chr2 (64-139)||(24476869-24476943)
chr2 (84-145)||(2986934-2986996)
chr2 (64-112)||(810806-810854)
chr2 (110-150)||(20347489-20347529)
chr2 (87-139)||(21837070-21837121)
chr2 (84-139)||(38716440-38716496)
[»] scaffold0302 (2 HSPs)
scaffold0302 (39-140)||(17469-17572)
scaffold0302 (64-139)||(18801-18877)
[»] scaffold0294 (2 HSPs)
scaffold0294 (44-140)||(5442-5540)
scaffold0294 (44-140)||(4441-4539)
[»] scaffold0186 (2 HSPs)
scaffold0186 (39-139)||(23081-23181)
scaffold0186 (56-140)||(23907-23992)
[»] scaffold0320 (1 HSPs)
scaffold0320 (39-140)||(19487-19590)
[»] scaffold2034 (1 HSPs)
scaffold2034 (39-139)||(233-335)
[»] scaffold0632 (1 HSPs)
scaffold0632 (39-140)||(3307-3409)
[»] scaffold0019 (2 HSPs)
scaffold0019 (39-139)||(60090-60192)
scaffold0019 (39-147)||(61458-61568)
[»] scaffold0112 (1 HSPs)
scaffold0112 (44-139)||(37148-37244)
[»] scaffold0049 (1 HSPs)
scaffold0049 (39-150)||(7414-7527)
[»] scaffold0419 (1 HSPs)
scaffold0419 (84-139)||(2961-3017)
[»] scaffold0227 (1 HSPs)
scaffold0227 (64-139)||(144-220)
[»] scaffold1303 (1 HSPs)
scaffold1303 (39-140)||(1438-1541)
[»] scaffold0369 (1 HSPs)
scaffold0369 (64-151)||(13181-13267)
[»] scaffold0093 (2 HSPs)
scaffold0093 (64-138)||(2490-2564)
scaffold0093 (64-138)||(7113-7187)
[»] scaffold0607 (1 HSPs)
scaffold0607 (84-141)||(2046-2104)
[»] scaffold0059 (2 HSPs)
scaffold0059 (64-138)||(4755-4829)
scaffold0059 (80-120)||(3695-3735)
[»] scaffold0045 (1 HSPs)
scaffold0045 (64-139)||(49109-49185)
[»] scaffold0025 (1 HSPs)
scaffold0025 (87-142)||(62069-62125)
[»] scaffold0060 (1 HSPs)
scaffold0060 (87-141)||(66424-66479)
[»] scaffold0003 (1 HSPs)
scaffold0003 (39-140)||(49432-49535)
[»] scaffold0179 (1 HSPs)
scaffold0179 (84-140)||(5649-5706)
[»] scaffold0024 (1 HSPs)
scaffold0024 (84-148)||(43815-43880)


Alignment Details
Target: chr8 (Bit Score: 165; Significance: 5e-88; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 252 - 498
Target Start/End: Original strand, 30338459 - 30338686
Alignment:
Q  252 gcccttattggggtattttcgtcaattggtaattggaagtctttcccctatatatatggagaagatagaagagggaatgggagaaagaagagggaacaca 351  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||                   ||||||    
T  30338459 gcccttataggggtattttcgtcaattggtaattggaagtctttcccttatatatatggagaagatagaaaaggg-------------------aacaca 30338539  T
Q  352 gagcatgtgggttgtttgtttatgttcttcttcttctctgattgctatcaattaccccagctgatcaattgctatcaattattatcctcaggtcattttt 451  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  30338540 gagcatgtgggttgtttgtttatgttcttcttcttctctgattgctatcaattaccccagctgatcaattgctatcaattattatcctcaggtaattttt 30338639  T
Q  452 cttctgaaaacaaacaactgatcaattgagtttgtttctgtttcttt 498  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  30338640 cttctgaaaacaaacaactgatcaattgagtttgtctctgtttcttt 30338686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 39 - 140
Target Start/End: Complemental strand, 5514083 - 5513981
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttag 137  Q
    ||||||||||||| | ||||||||| |||||||| ||||| ||||||||||||||||||||| ||| ||||||||| ||||||| |||||||||||||||    
T  5514083 gcaaaggggctaaattttaggggggcaaaattgtagtttttgtacttagggggccaaaattggaagtttttgaaagttagggggtaaaagtgcactttag 5513984  T
Q  138 cct 140  Q
    |||    
T  5513983 cct 5513981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 39 - 139
Target Start/End: Complemental strand, 10006446 - 10006344
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatag-gggggaaaagtgcacttta 136  Q
    ||||||||||||| ||||||||||  |||||||| |||||| |||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||    
T  10006446 gcaaaggggctaaatcttagggggccaaaattgttgttttgatacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcacttta 10006347  T
Q  137 gcc 139  Q
    |||    
T  10006346 gcc 10006344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 39 - 146
Target Start/End: Original strand, 12353360 - 12353467
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttag 137  Q
    |||| |||||||| ||||||||||  |||||| | |||||| |||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||    
T  12353360 gcaatggggctaaatcttagggggccaaaattatagttttg-tacttagggggccaaaattgcaagtttttgaaagttaagggggaaaagtgcactttag 12353458  T
Q  138 cctttattt 146  Q
    |||||||||    
T  12353459 cctttattt 12353467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 41 - 144
Target Start/End: Original strand, 22221365 - 22221470
Alignment:
Q  41 aaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatagggg-ggaaaagtgcactttagc 138  Q
    ||||||||||| ||||||||||  |||||||| |||||  ||||||||||| |||||||||||| ||||||||| |||||| ||||||||||||||||||    
T  22221365 aaaggggctaaatcttagggggtcaaaattgtagttttaatacttagggggtcaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagc 22221464  T
Q  139 ctttat 144  Q
    ||||||    
T  22221465 ctttat 22221470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 41 - 144
Target Start/End: Original strand, 22227707 - 22227812
Alignment:
Q  41 aaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatagggg-ggaaaagtgcactttagc 138  Q
    ||||||||||| ||||||||||  |||||||| |||||  ||||||||||| |||||||||||| ||||||||| |||||| ||||||||||||||||||    
T  22227707 aaaggggctaaatcttagggggtcaaaattgtagttttaatacttagggggtcaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagc 22227806  T
Q  139 ctttat 144  Q
    ||||||    
T  22227807 ctttat 22227812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 39 - 130
Target Start/End: Complemental strand, 18978121 - 18978029
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgc 130  Q
    ||||||||||||| ||||| ||||  |||||||| ||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  18978121 gcaaaggggctaaatcttaaggggccaaaattgtagtttttgtacttagggggccaaaattgaaagattttgaaagttaggggggaaaagtgc 18978029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 39 - 140
Target Start/End: Original strand, 10007762 - 10007865
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcacttta 136  Q
    ||||||||||||| |||||||||   |||||||||||||   |||||||||||||||||||||||| ||||||||| | |||||||||||||||||||||    
T  10007762 gcaaaggggctaaatcttaggggaccaaaattgtggtttctatacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcacttta 10007861  T
Q  137 gcct 140  Q
    ||||    
T  10007862 gcct 10007865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 39 - 130
Target Start/End: Complemental strand, 18971012 - 18970920
Alignment:
Q  39 gcaaaggggctaattctt-aggggggaaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgc 130  Q
    ||||||||| ||| |||| |||||  |||||||| ||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  18971012 gcaaaggggttaaatcttcaggggtcaaaattgtagtttttgtacttagggggccaaaattgaaagattttgaaagttaggggggaaaagtgc 18970920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 39 - 122
Target Start/End: Original strand, 24488679 - 24488762
Alignment:
Q  39 gcaaaggggctaattcttaggggggaaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatagggggg 122  Q
    |||| |||||||| ||||| |||| |||||||| |||||| || ||||||||||||||||||||| ||||||||| ||||||||    
T  24488679 gcaatggggctaaatcttacggggcaaaattgttgttttgatatttagggggccaaaattgcaagtttttgaaagttagggggg 24488762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 66 - 136
Target Start/End: Original strand, 29968364 - 29968434
Alignment:
Q  66 aattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcacttta 136  Q
    |||||| ||||| ||||||||||||||||||||||||| |||| |||| || |||||||||||||||||||    
T  29968364 aattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagttaagggggaaaagtgcacttta 29968434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 64 - 150
Target Start/End: Original strand, 32207350 - 32207435
Alignment:
Q  64 aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttagcctttattttatt 150  Q
    |||||||| ||||| |||||||||| | |||||||||||| ||||||| | |||||||| ||||||||||||||||||| |||||||    
T  32207350 aaaattgtagtttttgtacttagggcgtcaaaattgcaagtttttgaaggttagggggg-aaagtgcactttagccttttttttatt 32207435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 45 - 141
Target Start/End: Original strand, 5003103 - 5003199
Alignment:
Q  45 gggctaattcttaggggggaaaattgtggttttg-gtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttagcctt 141  Q
    ||||||| |||||||||  ||||||||||||||  |||||||||||   ||||||||||||||||||||| |||||||| ||||||| ||||||||||    
T  5003103 gggctaaatcttaggggacaaaattgtggtttttagtacttaggggtttaaaattgcaagattttgaaagttagggggg-aaagtgcgctttagcctt 5003199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 39 - 141
Target Start/End: Complemental strand, 8388564 - 8388462
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttag 137  Q
    ||||||||||||| ||||||||||  |||||| | ||||| |||| |||||||| ||||||||||  |||| |||| |||||||| ||||||||||||||    
T  8388564 gcaaaggggctaaatcttagggggccaaaattatagtttttgtacatagggggctaaaattgcaactttttaaaagttagggggg-aaagtgcactttag 8388466  T
Q  138 cctt 141  Q
    ||||    
T  8388465 cctt 8388462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 46 - 134
Target Start/End: Original strand, 1824084 - 1824174
Alignment:
Q  46 ggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatag-gggggaaaagtgcactt 134  Q
    |||||| ||||||||||  |||||||| ||||| ||||||||||| ||||||||||||| ||||||||| ||| ||||||||| |||||||    
T  1824084 ggctaaatcttagggggccaaaattgtagtttttgtacttaggggaccaaaattgcaagtttttgaaagttagagggggaaaaatgcactt 1824174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 46 - 134
Target Start/End: Original strand, 1858529 - 1858619
Alignment:
Q  46 ggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatag-gggggaaaagtgcactt 134  Q
    |||||| ||||||||||  |||||||| ||||| ||||||||||| ||||||||||||| ||||||||| ||| ||||||||| |||||||    
T  1858529 ggctaaatcttagggggccaaaattgtagtttttgtacttaggggaccaaaattgcaagtttttgaaagttagagggggaaaaatgcactt 1858619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 46 - 141
Target Start/End: Complemental strand, 12352016 - 12351919
Alignment:
Q  46 ggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcactttagcctt 141  Q
    |||||| ||||||||||  |||||||| ||||| |||||||||||| |||||||||||  ||||||||| | ||||||| ||| ||||||||||||||    
T  12352016 ggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaaatttttgaaagttaagggggggaaaatgcactttagcctt 12351919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 64 - 140
Target Start/End: Complemental strand, 24122958 - 24122882
Alignment:
Q  64 aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttagcct 140  Q
    |||||| | ||||| |||||||||||| |||||||||||  |||| |||| |||||||||||| |||||||||||||    
T  24122958 aaaattatagtttttgtacttagggggtcaaaattgcaaattttttaaagttaggggggaaaaatgcactttagcct 24122882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 39 - 141
Target Start/End: Complemental strand, 30335741 - 30335637
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcacttta 136  Q
    ||||||||||||| ||||||||||  ||||||||  |||| |||||||| | |||||||||||||| |||| |||| | |||| |||||| |||||||||    
T  30335741 gcaaaggggctaaatcttagggggttaaaattgtaatttttgtacttagcgagccaaaattgcaagtttttaaaagttaagggtggaaaaatgcacttta 30335642  T
Q  137 gcctt 141  Q
    |||||    
T  30335641 gcctt 30335637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 64 - 147
Target Start/End: Original strand, 38980069 - 38980153
Alignment:
Q  64 aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagata-ggggggaaaagtgcactttagcctttatttt 147  Q
    ||||||||||||||  ||| | |||||||||||| ||||  ||||||||| || |||||||||||||||||||||||||| ||||    
T  38980069 aaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcctttttttt 38980153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 64 - 147
Target Start/End: Original strand, 39011166 - 39011250
Alignment:
Q  64 aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagata-ggggggaaaagtgcactttagcctttatttt 147  Q
    ||||||||||||||  ||| | |||||||||||| ||||  ||||||||| || |||||||||||||||||||||||||| ||||    
T  39011166 aaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcctttttttt 39011250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 39 - 136
Target Start/End: Complemental strand, 11287878 - 11287779
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatagggg-ggaaaagtgcacttta 136  Q
    ||||||| | ||||||||||||||  |||||||| ||||  |||||||| |||||||||||||||| |||| |||| |||||| | ||||||||||||||    
T  11287878 gcaaaggagttaattcttagggggccaaaattgtagtttctgtacttagtgggccaaaattgcaagttttttaaagttaggggtgaaaaagtgcacttta 11287779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 64 - 138
Target Start/End: Original strand, 18979145 - 18979220
Alignment:
Q  64 aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagata-ggggggaaaagtgcactttagc 138  Q
    |||||||| |||||  || ||||||||||||||||||||| | ||||||| || ||||||||||||||||||||||    
T  18979145 aaaattgtagtttttatatttagggggccaaaattgcaagttgttgaaagttagggggggaaaagtgcactttagc 18979220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 39 - 139
Target Start/End: Complemental strand, 22220490 - 22220388
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatag-gggggaaaagtgcacttta 136  Q
    ||||| ||||||| ||||||||||  |||||||| |||||  ||| ||||||| ||||||||||||  ||| |||| ||| |||||||||||||||||||    
T  22220490 gcaaatgggctaaatcttagggggccaaaattgtagtttttatacatagggggtcaaaattgcaagtattttaaagttagagggggaaaagtgcacttta 22220391  T
Q  137 gcc 139  Q
    |||    
T  22220390 gcc 22220388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 83 - 139
Target Start/End: Complemental strand, 24483200 - 24483143
Alignment:
Q  83 ttagggggccaaaattgcaagattttgaaagatagg-ggggaaaagtgcactttagcc 139  Q
    ||||||||||||||||||||| ||||||||  |||| |||||||||||||||||||||    
T  24483200 ttagggggccaaaattgcaagtttttgaaaattaggaggggaaaagtgcactttagcc 24483143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 64 - 140
Target Start/End: Complemental strand, 32968532 - 32968455
Alignment:
Q  64 aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagata-ggggggaaaagtgcactttagcct 140  Q
    ||||||||||||||  ||| | |||||||||||| ||||  ||||||||| || ||||||||||||||||||||||||    
T  32968532 aaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcct 32968455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 65 - 144
Target Start/End: Complemental strand, 1823627 - 1823547
Alignment:
Q  65 aaattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcactttagcctttat 144  Q
    ||||||| ||||| |||||||| ||| |||||||||||| |||| |||| | |||||| |||||| |||||||||||||||    
T  1823627 aaattgtagtttttgtacttagagggtcaaaattgcaagtttttaaaagttaagggggaaaaagtacactttagcctttat 1823547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 65 - 144
Target Start/End: Complemental strand, 1858072 - 1857992
Alignment:
Q  65 aaattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcactttagcctttat 144  Q
    ||||||| ||||| |||||||| ||| |||||||||||| |||| |||| | |||||| |||||| |||||||||||||||    
T  1858072 aaattgtagtttttgtacttagagggtcaaaattgcaagtttttaaaagttaagggggaaaaagtacactttagcctttat 1857992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 84 - 140
Target Start/End: Complemental strand, 19391443 - 19391387
Alignment:
Q  84 tagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttagcct 140  Q
    |||||| |||||||||||| ||||||||| ||||||| |||||||||| ||||||||    
T  19391443 taggggaccaaaattgcaacattttgaaacataggggcgaaaagtgcagtttagcct 19391387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 64 - 139
Target Start/End: Original strand, 32973961 - 32974037
Alignment:
Q  64 aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatagggggg-aaaagtgcactttagcc 139  Q
    ||||||||||||||  ||| | |||||||||||| ||||  ||||||||| |||||||| |||||||||||||||||    
T  32973961 aaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttaggggggaaaaagtgcactttagcc 32974037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 64 - 139
Target Start/End: Complemental strand, 38974871 - 38974795
Alignment:
Q  64 aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagata-ggggggaaaagtgcactttagcc 139  Q
    ||||||||||||||  ||| | |||||||||||| ||||  ||||||||| || |||||||||||||||||||||||    
T  38974871 aaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcc 38974795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 64 - 139
Target Start/End: Complemental strand, 39005969 - 39005893
Alignment:
Q  64 aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagata-ggggggaaaagtgcactttagcc 139  Q
    ||||||||||||||  ||| | |||||||||||| ||||  ||||||||| || |||||||||||||||||||||||    
T  39005969 aaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcc 39005893  T

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Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 39 - 140
Target Start/End: Original strand, 24123897 - 24123997
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttag 137  Q
    ||||||||||||| ||||||| ||  ||||||||  |||| ||||||| | ||||||||||||||| ||||||||| || |||||  ||||| |||||||    
T  24123897 gcaaaggggctaaatcttaggaggctaaaattgtaattttagtacttaagaggccaaaattgcaagtttttgaaagttacggggg--aagtgtactttag 24123994  T
Q  138 cct 140  Q
    |||    
T  24123995 cct 24123997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 84 - 141
Target Start/End: Complemental strand, 5192328 - 5192270
Alignment:
Q  84 tagggggccaaaattgcaagattttgaaagataggggg-gaaaagtgcactttagcctt 141  Q
    ||||||||||||||||||| ||||||||| |||||||| |||||||| | |||||||||    
T  5192328 tagggggccaaaattgcaacattttgaaacatagggggcgaaaagtgaagtttagcctt 5192270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 84 - 140
Target Start/End: Complemental strand, 4518925 - 4518868
Alignment:
Q  84 tagggggccaaaattgcaagattttgaaagataggggg-gaaaagtgcactttagcct 140  Q
    |||||||||||||| |||| ||||| ||| |||||||| |||||||||||||||||||    
T  4518925 tagggggccaaaatcgcaatattttaaaatatagggggcgaaaagtgcactttagcct 4518868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 84 - 140
Target Start/End: Complemental strand, 4807656 - 4807599
Alignment:
Q  84 tagggggccaaaattgcaagattttgaaagatagg-ggggaaaagtgcactttagcct 140  Q
    ||||||||||||||||||| ||||||||| ||||| || |||||||||| ||||||||    
T  4807656 tagggggccaaaattgcaacattttgaaacataggaggcgaaaagtgcagtttagcct 4807599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 84 - 140
Target Start/End: Complemental strand, 11456694 - 11456637
Alignment:
Q  84 tagggggccaaaattgcaagattttgaaagataggggg-gaaaagtgcactttagcct 140  Q
    |||||||||||||||||||  ||||||||  ||||||| |||||||||||||||||||    
T  11456694 tagggggccaaaattgcaaatttttgaaaattagggggagaaaagtgcactttagcct 11456637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 74 - 139
Target Start/End: Original strand, 23170034 - 23170098
Alignment:
Q  74 ttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttagcc 139  Q
    |||| |||||||||||  |||||||||||| ||||||||  |||||||||||| ||||||||||||    
T  23170034 tttttgtacttaggggatcaaaattgcaagtttttgaaaattaggggggaaaa-tgcactttagcc 23170098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 84 - 140
Target Start/End: Original strand, 44147218 - 44147275
Alignment:
Q  84 tagggggccaaaattgcaagattttgaaagata-ggggggaaaagtgcactttagcct 140  Q
    |||||||||||||| |||| ||||||||| ||| |||| |||||||||||||||||||    
T  44147218 tagggggccaaaatcgcaatattttgaaacatatggggcgaaaagtgcactttagcct 44147275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 87 - 139
Target Start/End: Complemental strand, 3819541 - 3819489
Alignment:
Q  87 ggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttagcc 139  Q
    |||||||||||||||| |||||||||  || ||||||||| ||||||||||||    
T  3819541 ggggccaaaattgcaacattttgaaacttaagggggaaaaatgcactttagcc 3819489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 82 - 140
Target Start/End: Original strand, 11288902 - 11288962
Alignment:
Q  82 cttagggggccaaaa-ttgcaagattttgaaagatagggg-ggaaaagtgcactttagcct 140  Q
    ||||||||||||||| ||||||| ||||||||| |||||| | ||||||||||||||||||    
T  11288902 cttagggggccaaaaattgcaagtttttgaaagttaggggtgaaaaagtgcactttagcct 11288962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 91 - 142
Target Start/End: Original strand, 45114568 - 45114620
Alignment:
Q  91 ccaaaattgcaagattttgaaagatagggg-ggaaaagtgcactttagccttt 142  Q
    ||||||||||||| ||||||||| |||||| |||||||||||||| |||||||    
T  45114568 ccaaaattgcaagtttttgaaagttaggggcggaaaagtgcacttcagccttt 45114620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 39 - 136
Target Start/End: Complemental strand, 11282110 - 11282011
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcacttta 136  Q
    ||||||||| ||| ||||||||||  ||||||||  |||| |||  |||||||||||||||||||  |||| |||| | |||||| ||||||||||||||    
T  11282110 gcaaaggggttaaatcttagggggtcaaaattgtcatttttgtatatagggggccaaaattgcaactttttaaaagttaagggggaaaaagtgcacttta 11282011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 235
Target Start/End: Original strand, 30338410 - 30338441
Alignment:
Q  204 tctactaaactatataggacaatccatgtcca 235  Q
    ||||||||||||||||||||||||||||||||    
T  30338410 tctactaaactatataggacaatccatgtcca 30338441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 140
Target Start/End: Original strand, 5514270 - 5514371
Alignment:
Q  39 gcaaaggggctaattcttaggggggaaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttagc 138  Q
    ||||| ||||||| | |||| ||  |||||||| ||||| ||| ||||  ||| ||||||||||| |||| |||  ||||||  ||||||||||||||||    
T  5514270 gcaaatgggctaaattttagaggtcaaaattgtagtttttgtatttagaaggctaaaattgcaagttttttaaaattaggggataaaagtgcactttagc 5514369  T
Q  139 ct 140  Q
    ||    
T  5514370 ct 5514371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 140
Target Start/End: Original strand, 33895621 - 33895678
Alignment:
Q  84 tagggggccaaaattgcaagattttgaaagataggggg-gaaaagtgcactttagcct 140  Q
    |||||| |||||||||||| ||||| ||| |||||||| |||||||||| ||||||||    
T  33895621 taggggaccaaaattgcaacattttaaaatatagggggcgaaaagtgcagtttagcct 33895678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 144
Target Start/End: Complemental strand, 36249608 - 36249547
Alignment:
Q  84 tagggggccaaaattgcaagattttgaaagata-ggggggaaaagtgcactttagcctttat 144  Q
    |||| ||||||||||||||  ||||||||  || ||||||||||||||||||||||| ||||    
T  36249608 taggaggccaaaattgcaactttttgaaacttaaggggggaaaagtgcactttagccattat 36249547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 156; Significance: 1e-82; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 252 - 496
Target Start/End: Original strand, 23915469 - 23915733
Alignment:
Q  252 gcccttattggggtattttcgtcaattggtaattggaagtctttcccctatatatatggagaagatagaagag-------ggaatgggagaaagaa---- 340  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||       ||||||||||||||||        
T  23915469 gcccttataagggtattttcgtcaattggtaattggaagtctttccc--atatatatggagaagatagaagagagaagagggaatgggagaaagaagagg 23915566  T
Q  341 -----------gagggaacacagagcatgtgggttgtttgtttatgttcttcttcttctctgattgctatcaattaccccagctgatcaattgctatcaa 429  Q
               |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  23915567 gaacgagagaagagggaacacagagcatgtgggttgtttgtttctgttcttcttcttctccgattgctatcaattaccccaactgatcaattgctatcaa 23915666  T
Q  430 ttattatcctcaggtcatttttcttctgaaaacaaacaactgatcaattgagtttgtttctgtttct 496  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23915667 ttattatcctcaggtaatttttcttctgaaaacaaacaactgatcaattgagtttgtttctgtttct 23915733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 19753013 - 19752909
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttag 137  Q
    |||| |||||||| || |||||||  |||||||| ||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  19753013 gcaatggggctaaatcatagggggccaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagttaggggggaaaagtgcactttag 19752914  T
Q  138 ccttt 142  Q
    |||||    
T  19752913 ccttt 19752909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 39 - 140
Target Start/End: Original strand, 5778835 - 5778938
Alignment:
Q  39 gcaaaggggctaattcttagggggga-aaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatag-gggggaaaagtgcacttta 136  Q
    |||| |||||||| |||||||||||  ||||||||||||||||||||||||||| ||||||||||| ||||||||| ||| |||||||||||||||||||    
T  5778835 gcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggcaaaaattgcaagtttttgaaagttagagggggaaaagtgcacttta 5778934  T
Q  137 gcct 140  Q
    ||||    
T  5778935 gcct 5778938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 39 - 140
Target Start/End: Complemental strand, 5778001 - 5777900
Alignment:
Q  39 gcaaaggggctaattcttagggggga-aaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttag 137  Q
    |||| |||||||| |||||||||||  |||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||| ||||||||||||||    
T  5778001 gcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttagggggg-aaagtgcactttag 5777903  T
Q  138 cct 140  Q
    |||    
T  5777902 cct 5777900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 39 - 140
Target Start/End: Complemental strand, 25523171 - 25523068
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcacttta 136  Q
    ||||||||||||| ||||||||||  |||||||| ||||| ||||||||||||| ||||||||||| ||||||||| | |||||||||||||||||||||    
T  25523171 gcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggctaaaattgcaagtttttgaaagttaaggggggaaaagtgcacttta 25523072  T
Q  137 gcct 140  Q
    ||||    
T  25523071 gcct 25523068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 41 - 151
Target Start/End: Original strand, 22940624 - 22940738
Alignment:
Q  41 aaaggggctaattcttaggggggaaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcactttagcc 139  Q
    ||||||||||| | |||||||  ||||||||  |||| ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||||    
T  22940624 aaaggggctaaattttaggggtcaaaattgtaatttttgtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 22940723  T
Q  140 ---tttattttattt 151  Q
       ||||||||||||    
T  22940724 aagtttattttattt 22940738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 39 - 140
Target Start/End: Original strand, 18486901 - 18487004
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcacttta 136  Q
    ||||||||||||| ||||||||||  |||||||||||||   |||||||||||||||||||||||| ||||||||| | ||||||| |||||||||||||    
T  18486901 gcaaaggggctaaatcttagggggccaaaattgtggtttctatacttagggggccaaaattgcaagtttttgaaagttaagggggggaaagtgcacttta 18487000  T
Q  137 gcct 140  Q
    ||||    
T  18487001 gcct 18487004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 39 - 140
Target Start/End: Complemental strand, 28538778 - 28538675
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagata-ggggggaaaagtgcacttta 136  Q
    ||||||||||||| ||||||||||  |||||||| ||||| ||||||| |||| |||||||||||| ||||||||| || ||| ||||||||||||||||    
T  28538778 gcaaaggggctaaatcttagggggctaaaattgtagtttttgtacttaaggggtcaaaattgcaagtttttgaaagttacgggtggaaaagtgcacttta 28538679  T
Q  137 gcct 140  Q
    ||||    
T  28538678 gcct 28538675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 65 - 140
Target Start/End: Complemental strand, 5730517 - 5730440
Alignment:
Q  65 aaattgtggttttggtacttagggggccaaaattgcaagattttgaaagata--ggggggaaaagtgcactttagcct 140  Q
    |||||||||||||||||||||||  |||||||||||||| ||||||||| ||  ||||||||||||||||||||||||    
T  5730517 aaattgtggttttggtacttaggaagccaaaattgcaagtttttgaaagttaagggggggaaaagtgcactttagcct 5730440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 64 - 145
Target Start/End: Complemental strand, 18485214 - 18485132
Alignment:
Q  64 aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatag-gggggaaaagtgcactttagcctttatt 145  Q
    |||||||| |||||| |||||||||||||||||||||||| |||| |||| ||| |||| |||||||||||||||||||||||    
T  18485214 aaaattgttgttttgatacttagggggccaaaattgcaagttttttaaagttagaggggaaaaagtgcactttagcctttatt 18485132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 39 - 150
Target Start/End: Original strand, 28539819 - 28539931
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttag 137  Q
    |||||||| |||| |||||||||   |||||||| ||||| |||||||| ||| |||||||||||| |||| |||| |||||||||||| |||||||||     
T  28539819 gcaaagggactaaatcttaggggaccaaaattgtagtttttgtacttagagggtcaaaattgcaagtttttaaaagttaggggggaaaaatgcactttaa 28539918  T
Q  138 cctttattttatt 150  Q
    ||||| |||||||    
T  28539919 ccttttttttatt 28539931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 39 - 140
Target Start/End: Original strand, 19754129 - 19754233
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatagggggg--aaaagtgcacttt 135  Q
    |||| |||||||| || |||||||  |||||||| ||||| ||| ||||||||||||||||||||| ||||||||| ||||||||  |||| ||||||||    
T  19754129 gcaatggggctaaatcatagggggccaaaattgtagtttttgtatttagggggccaaaattgcaagtttttgaaagttaggggggaaaaaaatgcacttt 19754228  T
Q  136 agcct 140  Q
    |||||    
T  19754229 agcct 19754233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 39 - 141
Target Start/End: Original strand, 36486487 - 36486591
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatagggggg-aaaagtgcacttta 136  Q
    |||||||| |||| |||||||||   |||||||| ||||| |||||||||||| |||||||||||| |||| |||| |||||||| |||||||||||| |    
T  36486487 gcaaagggactaaatcttaggggaccaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaaagtgcacttca 36486586  T
Q  137 gcctt 141  Q
    |||||    
T  36486587 gcctt 36486591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 46 - 139
Target Start/End: Original strand, 25056387 - 25056482
Alignment:
Q  46 ggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatagg-ggggaaaagtgcactttagcc 139  Q
    |||||| ||||||||||  |||||||| |||||  ||||||||||| |||||||||||| ||||||||| |||| | |||||||||||||||||||    
T  25056387 ggctaaatcttagggggtcaaaattgtagttttaatacttagggggtcaaaattgcaagtttttgaaagttaggagtggaaaagtgcactttagcc 25056482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 39 - 139
Target Start/End: Complemental strand, 20214297 - 20214196
Alignment:
Q  39 gcaaaggggctaattctt-aggggggaaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttag 137  Q
    ||||| ||| |||||||| |||||  |||||||| ||||| |||| ||| | || ||||||||||| ||||||||| || ||||||||||||||||||||    
T  20214297 gcaaatgggataattcttgaggggccaaaattgtagtttttgtacatagagtgctaaaattgcaagtttttgaaagttaagggggaaaagtgcactttag 20214198  T
Q  138 cc 139  Q
    ||    
T  20214197 cc 20214196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 39 - 140
Target Start/End: Original strand, 16650854 - 16650957
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcacttta 136  Q
    ||||| |||||||  |||||||||  |||||||| |||||  ||||||||||| |||||||||||| |||| |||| | |||| ||||||||||||||||    
T  16650854 gcaaatgggctaaaccttagggggctaaaattgtagtttttatacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcacttta 16650953  T
Q  137 gcct 140  Q
    ||||    
T  16650954 gcct 16650957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 39 - 147
Target Start/End: Complemental strand, 1015586 - 1015476
Alignment:
Q  39 gcaaaggggctaattcttaggggg-gaaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatagggg-ggaaaagtgcacttta 136  Q
    |||||||| |||||||||||||||  |||||||| | ||| ||||  ||||||||||||||| ||  |||| |||| |||||| ||||||||||| |||     
T  1015586 gcaaagggactaattcttagggggttaaaattgtaggttttgtacacagggggccaaaattgtaactttttaaaagttaggggaggaaaagtgcattttt 1015487  T
Q  137 gcctttatttt 147  Q
    |||||||||||    
T  1015486 gcctttatttt 1015476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 65 - 111
Target Start/End: Original strand, 5730888 - 5730934
Alignment:
Q  65 aaattgtggttttggtacttagggggccaaaattgcaagattttgaa 111  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||    
T  5730888 aaattgtggttttggtacttagggggccaaaattggaagtttttgaa 5730934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 64 - 141
Target Start/End: Complemental strand, 33158174 - 33158096
Alignment:
Q  64 aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggg-gaaaagtgcactttagcctt 141  Q
    |||||||| ||||| |||||||||| | |||||||||||| ||||||||| |||||||  |||| ||||||||||||||    
T  33158174 aaaattgtagtttttgtacttagggtgtcaaaattgcaagtttttgaaagttagggggaaaaaaatgcactttagcctt 33158096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 84 - 140
Target Start/End: Original strand, 18695250 - 18695307
Alignment:
Q  84 tagggggccaaaattgcaagattttgaaagataggggg-gaaaagtgcactttagcct 140  Q
    |||||||||||||| |||| ||||||||| |||||||| |||||||||||||||||||    
T  18695250 tagggggccaaaatcgcaatattttgaaacatagggggcgaaaagtgcactttagcct 18695307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 24333015 - 24332910
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcacttta 136  Q
    ||||||||| ||| |||||| |||  |||||||| ||||| |||| || ||||||||||||||||| ||||||||  | |||||| ||||||||||||||    
T  24333015 gcaaaggggttaaatcttagagggtcaaaattgtagtttttgtacataaggggccaaaattgcaagtttttgaaacttaagggggaaaaagtgcacttta 24332916  T
Q  137 gccttt 142  Q
     |||||    
T  24332915 accttt 24332910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 84 - 141
Target Start/End: Complemental strand, 25556932 - 25556875
Alignment:
Q  84 tagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttagcctt 141  Q
    ||||||||||||||||||| ||||||||| ||||||| || ||||||| |||||||||    
T  25556932 tagggggccaaaattgcaacattttgaaacataggggcgataagtgcagtttagcctt 25556875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 80 - 140
Target Start/End: Original strand, 33160327 - 33160388
Alignment:
Q  80 tacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcactttagcct 140  Q
    |||||||||||| ||||||||||| ||||||||  | |||||||||||||||||||||||||    
T  33160327 tacttagggggctaaaattgcaagtttttgaaaattaaggggggaaaagtgcactttagcct 33160388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 39 - 150
Target Start/End: Complemental strand, 21835142 - 21835030
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttag 137  Q
    ||||||||| ||| ||||||||||  |||||||| ||||| |||| ||||||| ||||||  |||  |||| |||  ||| |||| ||||||||||||||    
T  21835142 gcaaaggggttaaatcttagggggtcaaaattgtagtttttgtacatagggggtcaaaatcacaactttttcaaacttagagggggaaagtgcactttag 21835043  T
Q  138 cctttattttatt 150  Q
    |||||| ||||||    
T  21835042 cctttactttatt 21835030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 39 - 136
Target Start/End: Original strand, 20216762 - 20216861
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcacttta 136  Q
    ||||| |||||||||||| |||||  |||||||| ||||| |||  ||||| || ||||||||||| ||||||||  | |||||||||||||||||||||    
T  20216762 gcaaatgggctaattcttggggggccaaaattgtagtttttgtatatagggagctaaaattgcaagtttttgaaaattaaggggggaaaagtgcacttta 20216861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 39 - 140
Target Start/End: Complemental strand, 25055514 - 25055411
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatag-gggggaaaagtgcacttta 136  Q
    ||||| ||||||| ||||||||||  |||||||| |||||  ||| ||||||  |||||||||||||  || |||| ||| |||||||||||||||||||    
T  25055514 gcaaatgggctaaatcttagggggccaaaattgtagtttttatacataggggatcaaaattgcaagaagtttaaagttagagggggaaaagtgcacttta 25055415  T
Q  137 gcct 140  Q
    ||||    
T  25055414 gcct 25055411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 64 - 140
Target Start/End: Original strand, 25524152 - 25524230
Alignment:
Q  64 aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagata--ggggggaaaagtgcactttagcct 140  Q
    |||||||| ||||| |||||||||||||||||||| |||  |||| |||  ||  ||||||||||||||||||||||||    
T  25524152 aaaattgtagtttttgtacttagggggccaaaattacaaatttttaaaaattaggggggggaaaagtgcactttagcct 25524230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 140
Target Start/End: Complemental strand, 23765473 - 23765419
Alignment:
Q  87 ggggccaaaattgcaagattttgaaagataggggg-gaaaagtgcactttagcct 140  Q
    |||||||||||||||| ||||||||| |||||||| |||||||||| ||||||||    
T  23765473 ggggccaaaattgcaacattttgaaacatagggggcgaaaagtgcagtttagcct 23765419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 140
Target Start/End: Complemental strand, 23815321 - 23815267
Alignment:
Q  87 ggggccaaaattgcaagattttgaaagataggggg-gaaaagtgcactttagcct 140  Q
    |||||||||||||||| ||||||||| |||||||| |||||||||| ||||||||    
T  23815321 ggggccaaaattgcaacattttgaaacatagggggcgaaaagtgcagtttagcct 23815267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 39 - 136
Target Start/End: Complemental strand, 42195234 - 42195137
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcacttta 136  Q
    ||||||||||||| |||||||||   |||||||| | ||| |||| |||||||||||||| ||||  |||| |||| || |||||||||||||||||||    
T  42195234 gcaaaggggctaaatcttaggggaccaaaattgtagattttgtacatagggggccaaaatcgcaacttttt-aaagttaagggggaaaagtgcacttta 42195137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 84 - 140
Target Start/End: Complemental strand, 31055371 - 31055314
Alignment:
Q  84 tagggggccaaaattgcaagattttgaaagataggggg-gaaaagtgcactttagcct 140  Q
    ||||||||||||||||||| ||| ||||| |||||||| |||||||||| ||||||||    
T  31055371 tagggggccaaaattgcaacattatgaaacatagggggcgaaaagtgcagtttagcct 31055314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 84 - 143
Target Start/End: Complemental strand, 24025077 - 24025017
Alignment:
Q  84 tagggggccaaaattgcaagattttgaaagataggggg-gaaaagtgcactttagccttta 143  Q
    |||||||||||||| |||| |||||||||  ||||||| ||| ||||||||||||||||||    
T  24025077 tagggggccaaaatcgcaatattttgaaacttagggggcgaatagtgcactttagccttta 24025017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 39 - 149
Target Start/End: Original strand, 40255671 - 40255783
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatagg-ggggaaaagtgcacttta 136  Q
    |||| |||| ||| ||||||||||  |||||||| ||||  ||| |||||||| |||||||||||| |||| |||  || | ||||||||||||||||||    
T  40255671 gcaatggggttaaatcttagggggccaaaattgtagtttctgtatttagggggtcaaaattgcaagtttttaaaaattaagaggggaaaagtgcacttta 40255770  T
Q  137 gcctttattttat 149  Q
    |||| | ||||||    
T  40255771 gcctatcttttat 40255783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 99
Target Start/End: Original strand, 25524097 - 25524158
Alignment:
Q  39 gcaaaggggctaattcttaggggg-gaaaattgtggttttggtacttagggggccaaaattg 99  Q
    ||||||||||||| ||||||||||  |||||| | ||||| ||||||||| |||||||||||    
T  25524097 gcaaaggggctaaatcttagggggtcaaaattatagtttttgtacttaggaggccaaaattg 25524158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 34893739 - 34893686
Alignment:
Q  66 aattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggg 119  Q
    |||||| ||||| |||| ||||| |||||||||||||| ||||||||| |||||    
T  34893739 aattgtagtttttgtacatagggagccaaaattgcaagtttttgaaagttaggg 34893686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 136
Target Start/End: Complemental strand, 40428695 - 40428642
Alignment:
Q  84 tagggggccaaaattgcaagattttgaaagataggggg-gaaaagtgcacttta 136  Q
    |||||| ||||||| |||| ||||||||| |||||||| |||||||||||||||    
T  40428695 taggggaccaaaatcgcaacattttgaaacatagggggcgaaaagtgcacttta 40428642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 84 - 151
Target Start/End: Original strand, 245842 - 245910
Alignment:
Q  84 tagggggccaaaattgcaagattttgaaagataggggg-gaaaagtgcactttagcctttattttattt 151  Q
    |||||| | ||||| |||| ||||| ||| ||||| || ||||||||||||||||||||| ||||||||    
T  245842 taggggactaaaatcgcaacattttaaaacataggtggcgaaaagtgcactttagcctttgttttattt 245910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 152; Significance: 3e-80; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 252 - 496
Target Start/End: Complemental strand, 18990053 - 18989789
Alignment:
Q  252 gcccttattggggtattttcgtcaattggtaattggaagtctttcccctatatatatggagaagatagaagag-------ggaatgggagaaagaagagg 344  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||       ||||||||||||||||||||    
T  18990053 gcccttataagggtattttcgtcaattggtaattggaagtctttccc--atatatatggagaagatagaagagagaagagggaatgggagaaagaagagg 18989956  T
Q  345 gaac---------------acagagcatgtgggttgtttgtttatgttcttcttcttctctgattgctatcaattaccccagctgatcaattgctatcaa 429  Q
    ||||               |||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  18989955 gaacgagagaagagggaacacagagcatgtgggttgtttgtgtctgttcttcttcttctccgattgctatcaattaccccaactgatcaattgctatcaa 18989856  T
Q  430 ttattatcctcaggtcatttttcttctgaaaacaaacaactgatcaattgagtttgtttctgtttct 496  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18989855 ttattatcctcaggtaatttttcttctgaaaacaaacaactgatcaattgagtttgtttctgtttct 18989789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 38 - 140
Target Start/End: Original strand, 27322066 - 27322169
Alignment:
Q  38 agcaaaggggctaattcttagggg-ggaaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcacttta 136  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27322066 agcaaaggggctaattcttagggggggaaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcacttta 27322165  T
Q  137 gcct 140  Q
    ||||    
T  27322166 gcct 27322169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 38 - 140
Target Start/End: Complemental strand, 27318419 - 27318314
Alignment:
Q  38 agcaaaggggctaattcttagggggga---aaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactt 134  Q
    ||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  27318419 agcaaaggggctaattcttaggggggggggaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatagggggaaaaggtgcactt 27318320  T
Q  135 tagcct 140  Q
    ||||||    
T  27318319 tagcct 27318314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 39 - 140
Target Start/End: Complemental strand, 8659367 - 8659264
Alignment:
Q  39 gcaaaggggctaattcttagggggga-aaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatag-gggggaaaagtgcacttta 136  Q
    |||| |||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||    
T  8659367 gcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcacttta 8659268  T
Q  137 gcct 140  Q
    ||||    
T  8659267 gcct 8659264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 47 - 140
Target Start/End: Complemental strand, 8821967 - 8821872
Alignment:
Q  47 gctaattcttagggggga-aaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatag-gggggaaaagtgcactttagcct 140  Q
    ||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||    
T  8821967 gctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcct 8821872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 65 - 148
Target Start/End: Complemental strand, 3721687 - 3721603
Alignment:
Q  65 aaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatag-gggggaaaagtgcactttagcctttatttta 148  Q
    ||||| |||||||||||||||||||| |||||||||||| ||||||||| ||| ||||||||||||||||||||||||| |||||    
T  3721687 aaattatggttttggtacttagggggtcaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcctttgtttta 3721603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 39 - 139
Target Start/End: Complemental strand, 7314981 - 7314880
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatag-gggggaaaagtgcacttta 136  Q
    ||||||||||||| ||||||||||  |||||||| |||||| |||||||||| ||||||||||||| ||||||||| ||| |||||||||||||||||||    
T  7314981 gcaaaggggctaaatcttagggggtcaaaattgttgttttgatacttagggg-ccaaaattgcaagtttttgaaagttagagggggaaaagtgcacttta 7314883  T
Q  137 gcc 139  Q
    |||    
T  7314882 gcc 7314880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 47 - 143
Target Start/End: Original strand, 8660211 - 8660308
Alignment:
Q  47 gctaattcttagggggga-aaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatagg-ggggaaaagtgcactttagccttta 143  Q
    ||||| |||||||||||  ||||||||||||||||||||| |||| |||||||||||| ||||||||| |||| |||||||||||||||||||||||||    
T  8660211 gctaaatcttaggggggctaaattgtggttttggtactta-ggggtcaaaattgcaagtttttgaaagttaggaggggaaaagtgcactttagccttta 8660308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 65 - 140
Target Start/End: Original strand, 3722533 - 3722609
Alignment:
Q  65 aaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggg-gggaaaagtgcactttagcct 140  Q
    |||||||||||||||||||||| ||| |||||||||||| ||||||||| ||||| |||||||||||||||||||||    
T  3722533 aaattgtggttttggtacttagagggtcaaaattgcaagtttttgaaagttagggagggaaaagtgcactttagcct 3722609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 45 - 139
Target Start/End: Original strand, 8822798 - 8822894
Alignment:
Q  45 gggctaattcttagggggga-aaattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcactttagcc 139  Q
    ||||||| |||||||||||  |||||||||||||||||||||||||| |||||||||||| ||||||||| | | | ||||||||||||||||||||    
T  8822798 gggctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttaaagagggaaaagtgcactttagcc 8822894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 39 - 140
Target Start/End: Original strand, 7316293 - 7316396
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcacttta 136  Q
    ||||||||||||| ||||| ||||  |||||||||||||   || ||||||||||||||||||||| ||||||||| | |||||||||||||||||||||    
T  7316293 gcaaaggggctaaatcttaaggggccaaaattgtggtttcaatatttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcacttta 7316392  T
Q  137 gcct 140  Q
    ||||    
T  7316393 gcct 7316396  T

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Target: chr6; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 39 - 136
Target Start/End: Original strand, 34834578 - 34834677
Alignment:
Q  39 gcaaaggggctaattcttagggggga-aaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggg-gggaaaagtgcacttta 136  Q
    |||| |||||||| |||||||||||  |||||||||||||| |||||||| |  |||||||||||| ||||||||| ||||| |||||||||||||||||    
T  34834578 gcaatggggctaaatcttaggggggctaaattgtggttttgatacttaggagatcaaaattgcaagtttttgaaagttagggagggaaaagtgcacttta 34834677  T

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Target: chr6; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 64 - 140
Target Start/End: Original strand, 16704522 - 16704599
Alignment:
Q  64 aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcactttagcct 140  Q
    |||||||| ||||| |||||||||||| |||||||||||| ||||||||| | |||| ||||||||||||||||||||    
T  16704522 aaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagttaagggaggaaaagtgcactttagcct 16704599  T

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Target: chr6; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 39 - 136
Target Start/End: Original strand, 1829602 - 1829701
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggg-gaaaagtgcacttta 136  Q
    ||||||||||||| ||||||||||  |||||||| |||||  ||||||||||| |||||||||||| |||| |||| |||||||  ||||||||||||||    
T  1829602 gcaaaggggctaaatcttagggggccaaaattgtagtttttatacttagggggtcaaaattgcaagtttttaaaagttagggggaaaaaagtgcacttta 1829701  T

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Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 64 - 140
Target Start/End: Original strand, 6842308 - 6842385
Alignment:
Q  64 aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatag-gggggaaaagtgcactttagcct 140  Q
    |||||||| ||||| | || |||||||||||||||||||  ||||||||  ||| |||||||||||||||||||||||    
T  6842308 aaaattgtagtttttgcacatagggggccaaaattgcaactttttgaaacttagagggggaaaagtgcactttagcct 6842385  T

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Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 39 - 140
Target Start/End: Complemental strand, 10784695 - 10784591
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagata--ggggggaaaagtgcacttt 135  Q
    ||||||||||||| |||| |||||  |||||||| |||||  |||||||||||  ||||||||||| |||| |||| ||  || ||||||||||||||||    
T  10784695 gcaaaggggctaaatctttgggggccaaaattgtagtttttatacttagggggttaaaattgcaagtttttaaaagttaagggagggaaaagtgcacttt 10784596  T
Q  136 agcct 140  Q
    |||||    
T  10784595 agcct 10784591  T

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Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 46 - 122
Target Start/End: Complemental strand, 34830997 - 34830920
Alignment:
Q  46 ggctaattcttagggggga-aaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatagggggg 122  Q
    |||||| |||||||||||  |||||||||||||||||||||||||||||||  |||||  ||||||||| | ||||||    
T  34830997 ggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaatatgcaaatttttgaaagttcgggggg 34830920  T

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Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 39 - 126
Target Start/End: Original strand, 10785912 - 10786000
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaa 126  Q
    ||||||||||||| ||||| ||||  |||||||| ||||| ||||||||||||  ||||||||||  |||| |||| ||||||||||||    
T  10785912 gcaaaggggctaaatcttaaggggttaaaattgtagtttttgtacttagggggttaaaattgcaaatttttaaaagttaggggggaaaa 10786000  T

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Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 92 - 139
Target Start/End: Complemental strand, 16703616 - 16703570
Alignment:
Q  92 caaaattgcaagattttgaaagataggggggaaaagtgcactttagcc 139  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||||    
T  16703616 caaaattgcaagtttttgaaagatag-ggggaaaagtgcactttagcc 16703570  T

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Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 145
Target Start/End: Original strand, 378495 - 378557
Alignment:
Q  83 ttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttagcctttatt 145  Q
    ||||||||||||||| |||| |||| ||||||||||||  ||||||||| || ||||||||||    
T  378495 ttagggggccaaaatcgcaacatttggaaagataggggtcaaaagtgcaattaagcctttatt 378557  T

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Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 39 - 148
Target Start/End: Original strand, 26575053 - 26575162
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttag 137  Q
    ||||||| | ||| ||||||||||  |||||||| ||||| ||||||| ||||  ||||||||||| ||||||||| ||| | || |||||||||||||     
T  26575053 gcaaaggagttaaatcttagggggccaaaattgtagtttttgtacttaaggggttaaaattgcaagtttttgaaagttagagagg-aaagtgcactttaa 26575151  T
Q  138 cctttatttta 148  Q
     ||||||||||    
T  26575152 tctttatttta 26575162  T

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Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 39 - 150
Target Start/End: Original strand, 3333025 - 3333138
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatagg-ggggaaaagtgcacttta 136  Q
    ||||||||||||| | |||| |||  |||||||| ||||| |||| |||||||||||||| ||||  |||| |||  |||  ||||||||||||| ||||    
T  3333025 gcaaaggggctaaattttagagggttaaaattgtagtttttgtacatagggggccaaaatcgcaactttttcaaacttagaaggggaaaagtgcaattta 3333124  T
Q  137 gcctttattttatt 150  Q
    ||||||| ||||||    
T  3333125 gcctttactttatt 3333138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 84 - 140
Target Start/End: Complemental strand, 35102547 - 35102490
Alignment:
Q  84 tagggggccaaaattgcaagattttgaaagataggggg-gaaaagtgcactttagcct 140  Q
    |||||||| ||||| |||| ||||||||| |||||||| |||||||||||||||||||    
T  35102547 tagggggctaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagcct 35102490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 84 - 141
Target Start/End: Original strand, 18791605 - 18791664
Alignment:
Q  84 tagggggccaaaattgcaagattttgaaagataggggg--gaaaagtgcactttagcctt 141  Q
    |||||||||||||| |||| ||||| ||| ||||||||  ||||||||||||||||||||    
T  18791605 tagggggccaaaatcgcaacattttaaaacatagggggacgaaaagtgcactttagcctt 18791664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 39 - 140
Target Start/End: Complemental strand, 27437930 - 27437827
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggg-gaaaagtgcacttta 136  Q
    ||||||| ||||| ||||||||||  |||||||| |||||  |   |||||||||||||||||||  |||| |||| || |||| |||||||||||||||    
T  27437930 gcaaaggagctaaatcttagggggtcaaaattgtagtttttatttatagggggccaaaattgcaacttttttaaagttaaggggagaaaagtgcacttta 27437831  T
Q  137 gcct 140  Q
    ||||    
T  27437830 gcct 27437827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 48 - 140
Target Start/End: Complemental strand, 14822453 - 14822359
Alignment:
Q  48 ctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcactttagcct 140  Q
    |||| ||||||||||  |||||||| ||||   |||||| ||||||||||||||||| ||||||||  | ||||| |||||||||||| ||||||    
T  14822453 ctaaatcttagggggccaaaattgtagtttctatacttatggggccaaaattgcaagtttttgaaaattaaggggtgaaaagtgcactctagcct 14822359  T

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Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 39 - 140
Target Start/End: Complemental strand, 26574720 - 26574618
Alignment:
Q  39 gcaaaggggctaattcttaggggggaaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatag-gggggaaaagtgcactttag 137  Q
    ||||||||||||| ||||| |||   ||| ||| ||||| |||||||| ||  |||||||||||| ||||||||| ||| || || ||| ||||||||||    
T  26574720 gcaaaggggctaaatcttaagggatcaaaatgtagtttttgtacttagaggttcaaaattgcaagtttttgaaagttagaggtgggaaattgcactttag 26574621  T
Q  138 cct 140  Q
    |||    
T  26574620 cct 26574618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 136
Target Start/End: Complemental strand, 4597461 - 4597408
Alignment:
Q  84 tagggggccaaaattgcaagattttgaaagataggggg-gaaaagtgcacttta 136  Q
    |||||| ||||||| |||| ||||||||| |||||||| |||||||||||||||    
T  4597461 taggggaccaaaatcgcaacattttgaaacatagggggcgaaaagtgcacttta 4597408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 140
Target Start/End: Complemental strand, 18749153 - 18749096
Alignment:
Q  84 tagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcactttagcct 140  Q
    ||||||||||||||||||| ||||| ||| || ||||| |||||||||| ||||||||    
T  18749153 tagggggccaaaattgcaacattttaaaacataaggggcgaaaagtgcagtttagcct 18749096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 203 - 235
Target Start/End: Complemental strand, 11694274 - 11694242
Alignment:
Q  203 ttctactaaactatataggacaatccatgtcca 235  Q
    ||||||||||||||||||||||||| |||||||    
T  11694274 ttctactaaactatataggacaatcaatgtcca 11694242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 14572234 - 14572186
Alignment:
Q  84 tagggggccaaaattgcaagattttgaaagataggggg-gaaaagtgca 131  Q
    ||||||||||||||||||| ||||| ||| |||||||| ||||||||||    
T  14572234 tagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgca 14572186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 48 - 140
Target Start/End: Original strand, 14823583 - 14823678
Alignment:
Q  48 ctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatagggggg--aaaagtgcactttagcct 140  Q
    |||| ||||||||||  |||||||| ||||  ||||||| ||||| ||||||||||| |||| |||  || |||||  ||||||||||||||||||    
T  14823583 ctaaatcttagggggccaaaattgtagtttctgtacttaaggggctaaaattgcaagttttttaaaattaagggggaaaaaagtgcactttagcct 14823678  T

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Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 84 - 151
Target Start/End: Complemental strand, 32451782 - 32451714
Alignment:
Q  84 tagggggccaaaattgcaagattttgaaagataggggg-gaaaagtgcactttagcctttattttattt 151  Q
    ||||||||||||||  ||| |||||||||  ||| ||| |||||||| | |||||||||||||||||||    
T  32451782 tagggggccaaaatcacaacattttgaaacttagagggcgaaaagtgaagtttagcctttattttattt 32451714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 89; Significance: 1e-42; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 38 - 142
Target Start/End: Complemental strand, 14868991 - 14868887
Alignment:
Q  38 agcaaaggggctaattcttaggggggaaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttag 137  Q
    ||||| |||||||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14868991 agcaatggggctaattcttagggggggaaattgtggttttgatacttagcgggccaaaattgcaagattttgaaagataggggggaaaagtgcactttag 14868892  T
Q  138 ccttt 142  Q
    |||||    
T  14868891 ccttt 14868887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 38 - 142
Target Start/End: Original strand, 14876943 - 14877047
Alignment:
Q  38 agcaaaggggctaattcttaggggggaaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttag 137  Q
    ||||| |||||||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14876943 agcaatggggctaattcttagggggggaaattgtggttttgatacttagcgggccaaaattgcaagattttgaaagataggggggaaaagtgcactttag 14877042  T
Q  138 ccttt 142  Q
    |||||    
T  14877043 ccttt 14877047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 43 - 151
Target Start/End: Original strand, 49308031 - 49308139
Alignment:
Q  43 aggggctaattcttaggggggaaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttagccttt 142  Q
    |||||| || || ||||||| |||||||| ||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |    
T  49308031 aggggcaaaatcatagggggcaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagttaggggggaaaagtgcactttagcctat 49308130  T
Q  143 attttattt 151  Q
     ||||||||    
T  49308131 tttttattt 49308139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 39 - 140
Target Start/End: Original strand, 5526125 - 5526227
Alignment:
Q  39 gcaaaggggctaattcttagggggga-aaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttag 137  Q
    |||| |||||||| |||||||||||  |||||||||||||| |||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||    
T  5526125 gcaatggggctaaatcttaggggggctaaattgtggttttgttacttagggggccaaaattgcaagtttttgaaagttagaggggaaaagtgcactttag 5526224  T
Q  138 cct 140  Q
    |||    
T  5526225 cct 5526227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 39 - 139
Target Start/End: Original strand, 10471387 - 10471489
Alignment:
Q  39 gcaaaggggctaattcttagggggga-aaattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcacttta 136  Q
    |||| |||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||||||||||    
T  10471387 gcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcacttta 10471486  T
Q  137 gcc 139  Q
    |||    
T  10471487 gcc 10471489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 39 - 143
Target Start/End: Complemental strand, 5525461 - 5525356
Alignment:
Q  39 gcaaaggggctaattcttagggggga-aaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttag 137  Q
    |||| |||||||| |||||||||||  |||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||| || |||||||    
T  5525461 gcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttaggggggaaaaatgtactttag 5525362  T
Q  138 ccttta 143  Q
    ||||||    
T  5525361 ccttta 5525356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 39 - 137
Target Start/End: Original strand, 19750574 - 19750673
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttag 137  Q
    |||| |||||||| ||||||||||| |||||||| ||||| ||||||||||||||||||||||||| |||| |||| |||||||||||||||||||||||    
T  19750574 gcaatggggctaaatcttaggggggtaaaattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagttaggggggaaaagtgcactttag 19750673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 39 - 137
Target Start/End: Complemental strand, 19789232 - 19789133
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttag 137  Q
    |||| |||||||| ||||||||||| |||||||| ||||| ||||||||||||||||||||||||| |||| |||| |||||||||||||||||||||||    
T  19789232 gcaatggggctaaatcttaggggggtaaaattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagttaggggggaaaagtgcactttag 19789133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 39 - 140
Target Start/End: Original strand, 25685821 - 25685924
Alignment:
Q  39 gcaaaggggctaattcttagggggga-aaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatag-gggggaaaagtgcacttta 136  Q
    |||| |||||||| ||||||||||   ||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||    
T  25685821 gcaatggggctaaatcttagggggtctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcacttta 25685920  T
Q  137 gcct 140  Q
    ||||    
T  25685921 gcct 25685924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 39 - 140
Target Start/End: Original strand, 1290197 - 1290300
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcacttta 136  Q
    ||||||||| ||| ||||||||||  |||||||| ||||| |||||||| |||||||||||||||||||||||||| | |||||||||||||||||||||    
T  1290197 gcaaaggggttaaatcttagggggctaaaattgtagtttttgtacttagagggccaaaattgcaagattttgaaagttaaggggggaaaagtgcacttta 1290296  T
Q  137 gcct 140  Q
    ||||    
T  1290297 gcct 1290300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 39 - 140
Target Start/End: Complemental strand, 48780350 - 48780247
Alignment:
Q  39 gcaaaggggctaattcttagggggga-aaattgtggttttggtacttagggggccaaaattgcaagattttgaaagata-ggggggaaaagtgcacttta 136  Q
    |||| |||||||| |||||||||||  |||||||||||||||||||||||||| |||||||||||| |||| |||| || ||||||||||||||||||||    
T  48780350 gcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaagtttttaaaagttagggggggaaaagtgcacttta 48780251  T
Q  137 gcct 140  Q
    ||||    
T  48780250 gcct 48780247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 39 - 139
Target Start/End: Complemental strand, 25685036 - 25684934
Alignment:
Q  39 gcaaaggggctaattcttagggggga-aaattgtggttttggtacttagggggccaaaattgcaagattttgaaagata-ggggggaaaagtgcacttta 136  Q
    |||| |||||||| |||||||||||  |||||||||||||||||||||| ||| |||||||||||| ||||||||| || ||||||||||||||||||||    
T  25685036 gcaatggggctaaatcttaggggggctaaattgtggttttggtacttagagggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcacttta 25684937  T
Q  137 gcc 139  Q
    |||    
T  25684936 gcc 25684934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 39 - 141
Target Start/End: Complemental strand, 10470648 - 10470544
Alignment:
Q  39 gcaaaggggctaattcttagggggga-aaattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcacttta 136  Q
    |||| |||||||| |||||||||||  |||||||| ||||||||||||| ||| |||||||||||| ||||||||| | |||||||||||||||||||||    
T  10470648 gcaatggggctaaatcttaggggggctaaattgtgattttggtacttagagggtcaaaattgcaagtttttgaaagttaaggggggaaaagtgcacttta 10470549  T
Q  137 gcctt 141  Q
    |||||    
T  10470548 gcctt 10470544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 41 - 140
Target Start/End: Original strand, 17388212 - 17388312
Alignment:
Q  41 aaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttagcc 139  Q
    |||||||||||||||| |||||  |||||||| ||||  ||||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  17388212 aaaggggctaattcttggggggccaaaattgtagtttatgtacttaagggaccaaaattgcaagtttttgaaagttaggggggaaaagtgcactttagcc 17388311  T
Q  140 t 140  Q
    |    
T  17388312 t 17388312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 39 - 140
Target Start/End: Complemental strand, 1963298 - 1963195
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcacttta 136  Q
    ||||||||||||||||||||||||  |||||||| ||||| |||| |||| ||||||||||||||  ||||||||| | |||||||||||||||||||||    
T  1963298 gcaaaggggctaattcttagggggctaaaattgtagtttttgtacataggaggccaaaattgcaactttttgaaagttaaggggggaaaagtgcacttta 1963199  T
Q  137 gcct 140  Q
    ||||    
T  1963198 gcct 1963195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 46 - 140
Target Start/End: Complemental strand, 13386111 - 13386013
Alignment:
Q  46 ggctaattcttaggggggaa--aattgtggttttggtacttagggggccaaaattgcaag-attttgaaagatag-gggggaaaagtgcactttagcct 140  Q
    |||||| ||||||||||| |  ||||||||||||||||||||||||||||||||||||||  ||||||||| ||| |||||||||||||||||||||||    
T  13386111 ggctaaatcttagggggggataaattgtggttttggtacttagggggccaaaattgcaagttttttgaaagttagagggggaaaagtgcactttagcct 13386013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 13386531 - 13386637
Alignment:
Q  39 gcaaaggggctaattcttagggggga-aaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatagggggg--aaaagtgcacttt 135  Q
    |||| |||||||  |||||||||||  ||||||||||||||||||||| |||| |||||||||||| ||||||||| ||||||||  |||||||||||||    
T  13386531 gcaatggggctagatcttaggggggctaaattgtggttttggtacttatggggtcaaaattgcaagtttttgaaagttagggggggaaaaagtgcacttt 13386630  T
Q  136 agccttt 142  Q
    |||||||    
T  13386631 agccttt 13386637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 39 - 145
Target Start/End: Complemental strand, 17383094 - 17382987
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttag 137  Q
    ||||||||| |||||||| |||||  |||||||| ||||| ||||||| ||| ||||||||||||| ||||||||| |||||| ||||||||||||||||    
T  17383094 gcaaaggggataattcttggggggccaaaattgtagtttttgtacttaagggaccaaaattgcaagtttttgaaagttaggggagaaaagtgcactttag 17382995  T
Q  138 cctttatt 145  Q
    ||| ||||    
T  17382994 cctatatt 17382987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 39 - 140
Target Start/End: Original strand, 1835101 - 1835204
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggg-gggaaaagtgcacttta 136  Q
    ||||||||||||| ||||||||||  |||||||| |||||  ||||||||||| |||||||||||| ||||||||| |||||  ||||||||||||||||    
T  1835101 gcaaaggggctaaatcttagggggtcaaaattgtagttttaatacttagggggtcaaaattgcaagtttttgaaagttagggatggaaaagtgcacttta 1835200  T
Q  137 gcct 140  Q
    ||||    
T  1835201 gcct 1835204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 31599891 - 31599786
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatagggggg-aaaagtgcacttta 136  Q
    ||||||||||||| |||||||||   |||||||| ||||| |||||||||||| |||||||||||| |||| |||| |||||||| |||||||||||| |    
T  31599891 gcaaaggggctaaatcttaggggaccaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaaagtgcacttca 31599792  T
Q  137 gccttt 142  Q
    ||||||    
T  31599791 gccttt 31599786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 39 - 139
Target Start/End: Complemental strand, 10447109 - 10447006
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagata--ggggggaaaagtgcacttt 135  Q
    ||||||||||||| ||||||||||| |||||||||||||| |||| |||||||| ||||||||||  ||||||||  ||   ||||||||||||||||||    
T  10447109 gcaaaggggctaaatcttaggggggtaaaattgtggtttttgtacatagggggctaaaattgcaactttttgaaacttaagagggggaaaagtgcacttt 10447010  T
Q  136 agcc 139  Q
    ||||    
T  10447009 agcc 10447006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 64 - 140
Target Start/End: Original strand, 26421647 - 26421723
Alignment:
Q  64 aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttagcct 140  Q
    |||||||| ||||| ||||||||| || |||||||||||| ||||||||| ||| ||||||||||||||||||||||    
T  26421647 aaaattgtagtttttgtacttaggaggtcaaaattgcaagtttttgaaagttagaggggaaaagtgcactttagcct 26421723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 39 - 140
Target Start/End: Original strand, 13509358 - 13509460
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttag 137  Q
    ||||||||||||| |||||||||   |||||||| |||||  ||||| |||||||||||||||||  |||| |||| |||||||||||||| ||||||||    
T  13509358 gcaaaggggctaaatcttaggggatcaaaattgtagttttcatacttggggggccaaaattgcaattttttaaaagttaggggggaaaagtacactttag 13509457  T
Q  138 cct 140  Q
    |||    
T  13509458 cct 13509460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 39 - 150
Target Start/End: Original strand, 48781045 - 48781157
Alignment:
Q  39 gcaaaggggctaattcttagggggga-aaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatag-gggggaaaagtgcacttta 136  Q
    |||| |||||||| | |||||||||  ||||||||||||| ||||||||||  ||||||||||||  ||||||||| ||| |||||||||||||||||||    
T  48781045 gcaatggggctaaattttaggggggctaaattgtggttttagtacttaggga-ccaaaattgcaaatttttgaaagttagagggggaaaagtgcacttta 48781143  T
Q  137 gcctttattttatt 150  Q
    ||||| || |||||    
T  48781144 gccttcatattatt 48781157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 64 - 142
Target Start/End: Original strand, 3928883 - 3928962
Alignment:
Q  64 aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagata-ggggggaaaagtgcactttagccttt 142  Q
    ||||||||||||||  ||| |||||||||||||| ||||  ||||||||| || ||||||||||||||||||||||||||    
T  3928883 aaaattgtggttttcatacatagggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagccttt 3928962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 39 - 136
Target Start/End: Complemental strand, 12129725 - 12129626
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcacttta 136  Q
    ||||| ||||||| ||||| ||||  |||||||| ||||| ||||||| ||||||||||||||||| ||||||||| | || ||||||||||||||||||    
T  12129725 gcaaatgggctaaatcttaaggggtcaaaattgtagtttttgtacttacggggccaaaattgcaagtttttgaaagttaagaggggaaaagtgcacttta 12129626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 64 - 141
Target Start/End: Original strand, 8758862 - 8758940
Alignment:
Q  64 aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcactttagcctt 141  Q
    |||||||| ||||  ||||||||||||||||||||||||| ||||||||| | |||||||||||||||| |||| ||||    
T  8758862 aaaattgtagtttctgtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcattttaacctt 8758940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 39 - 139
Target Start/End: Original strand, 31600984 - 31601086
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatag-gggggaaaagtgcacttta 136  Q
    ||||| ||||||| ||||| ||||  |||||||| ||||| |||||||||||| |||||||||||| |||| |||| ||| |||| ||||||||||||||    
T  31600984 gcaaatgggctaaatcttaaggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttagaggggaaaaagtgcacttta 31601083  T
Q  137 gcc 139  Q
    |||    
T  31601084 gcc 31601086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 39 - 139
Target Start/End: Complemental strand, 1834222 - 1834119
Alignment:
Q  39 gcaaaggggctaattcttagggggg--aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatag-gggggaaaagtgcacttt 135  Q
    ||||| ||||||| |||||||||||  |||||||| |||||  ||| ||||||| |||||||| ||| |||| |||| ||| ||||||||||||||||||    
T  1834222 gcaaatgggctaaatcttaggggggccaaaattgtagtttttatacatagggggtcaaaattgtaagttttttaaagttagagggggaaaagtgcacttt 1834123  T
Q  136 agcc 139  Q
    ||||    
T  1834122 agcc 1834119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 64 - 140
Target Start/End: Complemental strand, 8757750 - 8757674
Alignment:
Q  64 aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttagcct 140  Q
    |||||||| ||||  ||||||||||||| ||||||| ||| ||||||||| || |||| ||||||||||||||||||    
T  8757750 aaaattgtagtttctgtacttagggggctaaaattgtaagtttttgaaagttaaggggaaaaagtgcactttagcct 8757674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 39 - 136
Target Start/End: Complemental strand, 8155839 - 8155741
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggg-gccaaaattgcaagattttgaaagataggggggaaaagtgcacttta 136  Q
    |||||| |||||| ||||||||||  |||||||| ||||| | ||||||||| || ||||||||||| ||||||||| || |||||||||||||||||||    
T  8155839 gcaaagcggctaaatcttagggggccaaaattgtagtttttgaacttaggggagctaaaattgcaagtttttgaaagtta-gggggaaaagtgcacttta 8155741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 64 - 140
Target Start/End: Complemental strand, 49306850 - 49306774
Alignment:
Q  64 aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttagcct 140  Q
    |||||||| ||||| |||||||   ||||||||||||||| ||||||||| | ||||  ||||||||||||||||||    
T  49306850 aaaattgtagtttttgtacttaaatggccaaaattgcaagtttttgaaagttgggggaaaaaagtgcactttagcct 49306774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 84 - 142
Target Start/End: Original strand, 25011982 - 25012041
Alignment:
Q  84 tagggggccaaaattgcaagattttgaaagataggggg-gaaaagtgcactttagccttt 142  Q
    ||||||||||||||||||| ||| ||||| |||||||| |||||||||| ||||||||||    
T  25011982 tagggggccaaaattgcaacattatgaaacatagggggcgaaaagtgcagtttagccttt 25012041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 84 - 150
Target Start/End: Original strand, 47869901 - 47869968
Alignment:
Q  84 tagggggccaaaattgcaagattttgaaagataggggggaaaagt-gcactttagcctttattttatt 150  Q
    ||||||||||||||  ||| ||||||||| |||||||| |||| | ||||||||||||||||||||||    
T  47869901 tagggggccaaaatcacaacattttgaaatatagggggcaaaaattgcactttagcctttattttatt 47869968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 200 - 234
Target Start/End: Original strand, 1688188 - 1688222
Alignment:
Q  200 gtcttctactaaactatataggacaatccatgtcc 234  Q
    |||||||||||||||||||||||||||||||||||    
T  1688188 gtcttctactaaactatataggacaatccatgtcc 1688222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 64 - 141
Target Start/End: Complemental strand, 3927742 - 3927664
Alignment:
Q  64 aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatag-gggggaaaagtgcactttagcctt 141  Q
    |||||||| |||||  ||| | |||||||||||| |||| ||||| |||| ||| ||||||||||||||||||||||||    
T  3927742 aaaattgtagttttcatacatggggggccaaaatcgcaacattttaaaagttagagggggaaaagtgcactttagcctt 3927664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 87 - 142
Target Start/End: Complemental strand, 15058873 - 15058817
Alignment:
Q  87 ggggccaaaattgcaagattttgaaagataggggg-gaaaagtgcactttagccttt 142  Q
    ||||||||||| |||| ||||||||| ||||||||  ||||||||||||||||||||    
T  15058873 ggggccaaaatcgcaacattttgaaacatagggggccaaaagtgcactttagccttt 15058817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 80 - 136
Target Start/End: Complemental strand, 35934402 - 35934347
Alignment:
Q  80 tacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcacttta 136  Q
    |||||||||| |||||||| |||| ||||||||| ||||||| ||||||||||||||    
T  35934402 tacttaggggaccaaaattacaagtttttgaaagttaggggg-aaaagtgcacttta 35934347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 46 - 136
Target Start/End: Original strand, 35935539 - 35935631
Alignment:
Q  46 ggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcacttta 136  Q
    |||||| ||||||||||  |||||||| ||||  ||||||||||||| ||||||||||  |||| |||| | ||||||| |||||||||||||    
T  35935539 ggctaaatcttagggggccaaaattgtagtttatgtacttagggggctaaaattgcaaatttttaaaagttaagggggggaaagtgcacttta 35935631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 39 - 140
Target Start/End: Original strand, 52491606 - 52491709
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcacttta 136  Q
    |||| |||||||| | ||||||||  |||||||| ||||  ||| |||| || ||||||||||||| ||||||||| | |||| |||||||| |||||||    
T  52491606 gcaatggggctaaattttagggggccaaaattgtagtttctgtatttagaggaccaaaattgcaagtttttgaaagttaagggtggaaaagtacacttta 52491705  T
Q  137 gcct 140  Q
    ||||    
T  52491706 gcct 52491709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 39 - 139
Target Start/End: Original strand, 1964440 - 1964542
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcacttta 136  Q
    ||||||||| ||||||||| |||   |||||||| ||||| || | |||||||||||||||| ||  |||| |||| | |||| ||||||||||||||||    
T  1964440 gcaaaggggataattcttaagggaccaaaattgtagtttttgttcatagggggccaaaattgtaactttttaaaagttaagggtggaaaagtgcacttta 1964539  T
Q  137 gcc 139  Q
    |||    
T  1964540 gcc 1964542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 13 - 43
Target Start/End: Complemental strand, 14869033 - 14869003
Alignment:
Q  13 atcatcattgactgagtcaaaatagagcaaa 43  Q
    |||||||||||||||||||||||||||||||    
T  14869033 atcatcattgactgagtcaaaatagagcaaa 14869003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 13 - 43
Target Start/End: Original strand, 14876901 - 14876931
Alignment:
Q  13 atcatcattgactgagtcaaaatagagcaaa 43  Q
    |||||||||||||||||||||||||||||||    
T  14876901 atcatcattgactgagtcaaaatagagcaaa 14876931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 39 - 140
Target Start/End: Complemental strand, 21178098 - 21177996
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttag 137  Q
    ||||| ||||||| | ||||||||  |||||||| ||||| || | ||||||  |||||||||||  || |||||| |||||||| ||||| ||||||||    
T  21178098 gcaaaagggctaaattttagggggtcaaaattgtagtttttgttcataggggatcaaaattgcaactttatgaaagttagggggggaaagtacactttag 21177999  T
Q  138 cct 140  Q
    |||    
T  21177998 cct 21177996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 136
Target Start/End: Original strand, 4357499 - 4357552
Alignment:
Q  84 tagggggccaaaattgcaagattttgaaagataggggg-gaaaagtgcacttta 136  Q
    ||||||| |||||| |||| ||||||||| |||||||| |||||||||||||||    
T  4357499 tagggggtcaaaatcgcaacattttgaaatatagggggcgaaaagtgcacttta 4357552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 140
Target Start/End: Complemental strand, 13826476 - 13826419
Alignment:
Q  84 tagggggccaaaattgcaagattttgaaagataggggg-gaaaagtgcactttagcct 140  Q
    ||||||| |||||| |||| ||||| ||| |||||||| |||||||||||||||||||    
T  13826476 tagggggtcaaaatcgcaacatttttaaacatagggggcgaaaagtgcactttagcct 13826419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 150
Target Start/End: Original strand, 21539070 - 21539183
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcacttta 136  Q
    ||||||| ||||| ||||||||||  |||||||| |||||   ||||||| ||||||||||||||| |||| |||  | |||| |||||||||  |||||    
T  21539070 gcaaaggagctaaatcttagggggtcaaaattgtagtttttacacttaggaggccaaaattgcaagtttttaaaaattaagggtggaaaagtgtgcttta 21539169  T
Q  137 gcctttattttatt 150  Q
     ||||| |||||||    
T  21539170 accttttttttatt 21539183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 140
Target Start/End: Complemental strand, 43793687 - 43793630
Alignment:
Q  84 tagggggccaaaattgcaagattttgaaagataggggg-gaaaagtgcactttagcct 140  Q
    |||||||||||||| |||| ||||| ||| |||||||| |||||||||| ||||||||    
T  43793687 tagggggccaaaatcgcaacattttaaaacatagggggcgaaaagtgcagtttagcct 43793630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 84 - 139
Target Start/End: Complemental strand, 13394592 - 13394536
Alignment:
Q  84 tagggggccaaaattgcaagattttgaaagataggggg-gaaaagtgcactttagcc 139  Q
    |||||||| ||||| |||| ||||| ||| |||||||| ||||||||||||||||||    
T  13394592 tagggggctaaaatcgcaacattttaaaacatagggggcgaaaagtgcactttagcc 13394536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 84 - 139
Target Start/End: Complemental strand, 13397731 - 13397675
Alignment:
Q  84 tagggggccaaaattgcaagattttgaaagataggggg-gaaaagtgcactttagcc 139  Q
    |||||||| ||||| |||| ||||| ||| |||||||| ||||||||||||||||||    
T  13397731 tagggggctaaaatcgcaacattttaaaacatagggggcgaaaagtgcactttagcc 13397675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 84 - 147
Target Start/End: Original strand, 13397923 - 13397987
Alignment:
Q  84 tagggggccaaaattgcaagattttgaaagatag-gggggaaaagtgcactttagcctttatttt 147  Q
    ||||||||||||||||||| |||||||||  ||| ||| |||||||| | ||||||||| |||||    
T  13397923 tagggggccaaaattgcaatattttgaaacttagagggcgaaaagtgaagtttagccttaatttt 13397987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 37728590 - 37728662
Alignment:
Q  64 aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcacttta 136  Q
    |||||||| ||||| |||| |||| ||||||||||||||  |||| |||| |||| || |||| |||||||||    
T  37728590 aaaattgtagtttttgtacataggaggccaaaattgcaactttttaaaagttaggaggaaaaaatgcacttta 37728662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 88; Significance: 4e-42; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 38 - 140
Target Start/End: Original strand, 5029681 - 5029784
Alignment:
Q  38 agcaaaggggctaattcttaggggggaaaa-ttgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcacttta 136  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  5029681 agcaatggggctaattcttaggggggaaaaattgtggttttggtacttaggaggccaaaattgcaagattttgaaagataggggggaaaagtgcacttta 5029780  T
Q  137 gcct 140  Q
    ||||    
T  5029781 gcct 5029784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 58 - 150
Target Start/End: Complemental strand, 5001282 - 5001189
Alignment:
Q  58 ggggggaaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatagggg-ggaaaagtgcactttagcctttattttatt 150  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | |||||||    
T  5001282 gggggggaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggaggaaaagtgcactttagcctattttttatt 5001189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 39 - 148
Target Start/End: Original strand, 47610579 - 47610690
Alignment:
Q  39 gcaaaggggctaattcttagggggga-aaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatag-gggggaaaagtgcacttta 136  Q
    |||| |||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||    
T  47610579 gcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcacttta 47610678  T
Q  137 gcctttatttta 148  Q
     ||| |||||||    
T  47610679 acctatatttta 47610690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 39 - 139
Target Start/End: Complemental strand, 51470074 - 51469972
Alignment:
Q  39 gcaaaggggctaattcttagggggga-aaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggg-gggaaaagtgcacttta 136  Q
    |||| |||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||  ||||| |||||||||||||||||    
T  51470074 gcaatggggctaaatcttaggggggttaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaaattagggagggaaaagtgcacttta 51469975  T
Q  137 gcc 139  Q
    |||    
T  51469974 gcc 51469972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 39 - 150
Target Start/End: Original strand, 22776811 - 22776924
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatagggg-ggaaaagtgcacttta 136  Q
    ||||||||||||||||||||||||  |||||||| ||||| |||| |||||||||||||||||||  || |||||| |||||| ||||||||||||||||    
T  22776811 gcaaaggggctaattcttagggggccaaaattgtagtttttgtacatagggggccaaaattgcaactttctgaaagttaggggtggaaaagtgcacttta 22776910  T
Q  137 gcctttattttatt 150  Q
    |||| |||||||||    
T  22776911 gcctatattttatt 22776924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 39 - 140
Target Start/End: Complemental strand, 47609799 - 47609696
Alignment:
Q  39 gcaaaggggctaattcttagggggga-aaattgtggttttggtacttagggggccaaaattgcaagattttgaaagata-ggggggaaaagtgcacttta 136  Q
    |||| |||||||| |||||||||||  |||||||||||||||||||||||||| |||||||||||| ||||||||| || ||||||||||||||| ||||    
T  47609799 gcaatggggctaaatcttaggggggttaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcatttta 47609700  T
Q  137 gcct 140  Q
    ||||    
T  47609699 gcct 47609696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 54540789 - 54540894
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcacttta 136  Q
    ||||||||||||| ||||||||||  |||||||| ||||| ||||||| |||| |||||||||||| ||||||||| | |||||||||||||||||||||    
T  54540789 gcaaaggggctaaatcttagggggccaaaattgtagtttttgtacttaaggggtcaaaattgcaagtttttgaaagttaaggggggaaaagtgcacttta 54540888  T
Q  137 gccttt 142  Q
    ||||||    
T  54540889 gccttt 54540894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 39 - 149
Target Start/End: Original strand, 12703499 - 12703610
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttag 137  Q
    |||| |||||||| || |||||||  |||||||| ||||| |||||||||||||||||||| |||  ||||||||| ||| ||| |||||||||||||||    
T  12703499 gcaatggggctaaatcatagggggccaaaattgtagtttttgtacttagggggccaaaattacaaatttttgaaagttagagggaaaaagtgcactttag 12703598  T
Q  138 cctttattttat 149  Q
    ||||||||||||    
T  12703599 cctttattttat 12703610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 39 - 139
Target Start/End: Complemental strand, 47614287 - 47614185
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatag-gggggaaaagtgcacttta 136  Q
    |||||| |||||| ||||||||||  |||||||| |||||| |||||||||||||||||||||||| ||||||||| ||| |||| ||||||||||||||    
T  47614287 gcaaagaggctaaatcttagggggccaaaattgttgttttgatacttagggggccaaaattgcaagtttttgaaagttagaggggaaaaagtgcacttta 47614188  T
Q  137 gcc 139  Q
    |||    
T  47614187 gcc 47614185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 64 - 140
Target Start/End: Complemental strand, 12700249 - 12700174
Alignment:
Q  64 aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttagcct 140  Q
    |||||||| ||||| ||||||||||||||||||||||||| ||||||||| |||||||| |||||||||||||||||    
T  12700249 aaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagttagggggg-aaagtgcactttagcct 12700174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 46 - 136
Target Start/End: Complemental strand, 7267738 - 7267647
Alignment:
Q  46 ggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcacttta 136  Q
    |||||| ||||||||||  |||||||| ||||  ||||||||||||||||||||||||| ||||||||| || |||||||||||||||||||    
T  7267738 ggctaaatcttagggggccaaaattgtagtttctgtacttagggggccaaaattgcaagtttttgaaagttaagggggaaaagtgcacttta 7267647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 39 - 140
Target Start/End: Complemental strand, 29931328 - 29931225
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatagggg-ggaaaagtgcacttta 136  Q
    ||||||||| ||| ||||||||||  |||||||| ||||| ||| ||||||||| ||||||||||| ||||||||| |||||| ||||||||||||||||    
T  29931328 gcaaaggggttaaatcttagggggccaaaattgtagtttttgtatttagggggcaaaaattgcaagtttttgaaagttaggggtggaaaagtgcacttta 29931229  T
Q  137 gcct 140  Q
    ||||    
T  29931228 gcct 29931225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 39 - 140
Target Start/End: Complemental strand, 29980482 - 29980379
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatagggg-ggaaaagtgcacttta 136  Q
    ||||||||| ||| ||||||||||  |||||||| ||||| ||| ||||||||| ||||||||||| ||||||||| |||||| ||||||||||||||||    
T  29980482 gcaaaggggttaaatcttagggggccaaaattgtagtttttgtatttagggggcaaaaattgcaagtttttgaaagttaggggtggaaaagtgcacttta 29980383  T
Q  137 gcct 140  Q
    ||||    
T  29980382 gcct 29980379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 65 - 140
Target Start/End: Original strand, 51470481 - 51470556
Alignment:
Q  65 aaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttagcct 140  Q
    |||||||||||||||||||||||||  | |||||||||| ||||||||| |||||||||| |||||||||||||||    
T  51470481 aaattgtggttttggtacttaggggatctaaattgcaagtttttgaaagttaggggggaagagtgcactttagcct 51470556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 40 - 140
Target Start/End: Complemental strand, 7758503 - 7758401
Alignment:
Q  40 caaaggggctaattcttaggggggaaaa-ttgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcactttag 137  Q
    |||||||| ||| |||||||||| |||| |||| ||||| |||||||||||| |||||||||||| ||||||||| | |||||| |||||||||||||||    
T  7758503 caaaggggttaaatcttagggggcaaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagttaagggggaaaaagtgcactttag 7758404  T
Q  138 cct 140  Q
    |||    
T  7758403 cct 7758401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 39 - 150
Target Start/End: Original strand, 29932698 - 29932810
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatag-gggggaaaagtgcacttta 136  Q
    |||||||| |||| ||||| ||||  |||||||| ||||| ||||||||||| ||||||||||||| ||||||||| ||| |||||||||||||||||||    
T  29932698 gcaaagggactaaatcttaaggggtcaaaattgtagtttttgtacttagggg-ccaaaattgcaagtttttgaaagttagagggggaaaagtgcacttta 29932796  T
Q  137 gcctttattttatt 150  Q
    ||||| ||| ||||    
T  29932797 gccttaattctatt 29932810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 39 - 150
Target Start/End: Original strand, 29981852 - 29981964
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatag-gggggaaaagtgcacttta 136  Q
    |||||||| |||| ||||| ||||  |||||||| ||||| ||||||||||| ||||||||||||| ||||||||| ||| |||||||||||||||||||    
T  29981852 gcaaagggactaaatcttaaggggtcaaaattgtagtttttgtacttagggg-ccaaaattgcaagtttttgaaagttagagggggaaaagtgcacttta 29981950  T
Q  137 gcctttattttatt 150  Q
    ||||| ||| ||||    
T  29981951 gccttaattctatt 29981964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 39 - 141
Target Start/End: Original strand, 55191994 - 55192097
Alignment:
Q  39 gcaaaggggctaattctt-aggggggaaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttag 137  Q
    ||||||||| |||||||| |||||  |||||||| ||||| |||||||| |||||||||||||||| ||||||||| || ||||| ||| | ||||||||    
T  55191994 gcaaaggggttaattcttgaggggccaaaattgtagtttttgtacttagagggccaaaattgcaagtttttgaaagttaaggggggaaaatacactttag 55192093  T
Q  138 cctt 141  Q
    ||||    
T  55192094 cctt 55192097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 46 - 147
Target Start/End: Complemental strand, 8456572 - 8456470
Alignment:
Q  46 ggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttagcctttat 144  Q
    |||||| ||||||||||  |||||||| ||||| ||| ||||||| ||||||||||||| ||||||||  ||||||| |||||||||||||||| ||| |    
T  8456572 ggctaaatcttagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaagtttttgaaaattagggggaaaaagtgcactttagctttttt 8456473  T
Q  145 ttt 147  Q
    |||    
T  8456472 ttt 8456470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 39 - 139
Target Start/End: Original strand, 52840603 - 52840705
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatagggg-ggaaaagtgcacttta 136  Q
    |||| |||||||| ||||||||||  |||||||| |||||| || |||||| |||||||||||||| ||||||||| |||||| ||||||| ||||||||    
T  52840603 gcaatggggctaaatcttagggggacaaaattgttgttttgataattagggagccaaaattgcaagtttttgaaagttaggggaggaaaagggcacttta 52840702  T
Q  137 gcc 139  Q
    |||    
T  52840703 gcc 52840705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 64 - 140
Target Start/End: Complemental strand, 19984925 - 19984848
Alignment:
Q  64 aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagata-ggggggaaaagtgcactttagcct 140  Q
    |||||||| ||||| |||| |||||||||||||||||||| ||||||||  || ||||||||||||||||||||||||    
T  19984925 aaaattgtagtttttgtacatagggggccaaaattgcaagtttttgaaacttagggggggaaaagtgcactttagcct 19984848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 64 - 145
Target Start/End: Complemental strand, 28262268 - 28262187
Alignment:
Q  64 aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttagcctttatt 145  Q
    ||||||||||||||  ||| | |||||||||||| ||||  ||||||||| |||||||||||||||||||||||||| ||||    
T  28262268 aaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttaggggggaaaagtgcactttagcctatatt 28262187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 39 - 139
Target Start/End: Complemental strand, 51037637 - 51037536
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttag 137  Q
    ||||||||||||||||||||||||  |||||||| ||||| || | ||| ||| |||||||||||  ||||||||| || ||| ||||||||||||||||    
T  51037637 gcaaaggggctaattcttagggggctaaaattgtagtttttgttcatagagggtcaaaattgcaactttttgaaagttaagggagaaaagtgcactttag 51037538  T
Q  138 cc 139  Q
    ||    
T  51037537 cc 51037536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 80 - 136
Target Start/End: Original strand, 7268868 - 7268924
Alignment:
Q  80 tacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcacttta 136  Q
    |||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  7268868 tacttaggaggccaaaattgcaagtttttgaaagttaggggggaaaagtgcacttta 7268924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 35 - 141
Target Start/End: Complemental strand, 24516566 - 24516458
Alignment:
Q  35 tagagcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatagggggg-aaaagtgcac 132  Q
    ||||||||||| ||||| ||||| ||||  |||||||| |||||  ||||||||| |||||||||||||| |||| |||| |||||||| ||||||||||    
T  24516566 tagagcaaaggagctaaatcttaaggggccaaaattgtagtttttatacttagggtgccaaaattgcaagttttttaaagttaggggggaaaaagtgcac 24516467  T
Q  133 tttagcctt 141  Q
    ||| |||||    
T  24516466 tttggcctt 24516458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 82 - 140
Target Start/End: Original strand, 47615591 - 47615650
Alignment:
Q  82 cttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcactttagcct 140  Q
    |||||||||||||||||||||| ||||||||| | |||||||||||||||||||||||||    
T  47615591 cttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcct 47615650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 64 - 140
Target Start/End: Original strand, 52281572 - 52281649
Alignment:
Q  64 aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagata-ggggggaaaagtgcactttagcct 140  Q
    ||||||||||||||  ||| | |||||||||||| ||||  |||||||||||| ||||||||||||||||||||||||    
T  52281572 aaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagatagggggggaaaagtgcactttagcct 52281649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 45 - 139
Target Start/End: Original strand, 535787 - 535883
Alignment:
Q  45 gggctaattcttaggggg-gaaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatagggg-ggaaaagtgcactttagcc 139  Q
    ||||||| |||||||||| ||||||| | |||||  |||||| ||| ||||||||||||| ||||||||| |||||| |||||||| ||||||||||    
T  535787 gggctaaatcttagggggtgaaaattatagttttaatacttaagggaccaaaattgcaagtttttgaaagttaggggtggaaaagtacactttagcc 535883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 84 - 147
Target Start/End: Complemental strand, 3328869 - 3328805
Alignment:
Q  84 tagggggccaaaattgcaagattttgaaagataggggg-gaaaagtgcactttagcctttatttt 147  Q
    |||||||||||||||| || ||||||||| |||||||| |||||||||| |||||||||||||||    
T  3328869 tagggggccaaaattgtaacattttgaaacatagggggcgaaaagtgcagtttagcctttatttt 3328805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 64 - 141
Target Start/End: Complemental strand, 54539831 - 54539753
Alignment:
Q  64 aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcactttagcctt 141  Q
    |||||||| ||||| ||| ||||||||  ||||||||||| ||||||||| | |||| |||||||||||||||||||||    
T  54539831 aaaattgtagtttttgtatttagggggttaaaattgcaagtttttgaaagttaagggtggaaaagtgcactttagcctt 54539753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 11671385 - 11671442
Alignment:
Q  83 ttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttagcct 140  Q
    ||||||||| ||||||||||| ||||||||| |||| || ||||||||||||||||||    
T  11671385 ttagggggctaaaattgcaagtttttgaaagttaggcggaaaaagtgcactttagcct 11671442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 84 - 140
Target Start/End: Complemental strand, 22447796 - 22447739
Alignment:
Q  84 tagggggccaaaattgcaagattttgaaagataggggg-gaaaagtgcactttagcct 140  Q
    ||||||||||||||||||| ||||||||| |||||||| |||||||||| ||||||||    
T  22447796 tagggggccaaaattgcaacattttgaaacatagggggcgaaaagtgcagtttagcct 22447739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 64 - 140
Target Start/End: Complemental strand, 52276380 - 52276303
Alignment:
Q  64 aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatagg-ggggaaaagtgcactttagcct 140  Q
    |||||||| |||||  ||| | |||||||||||| ||||  |||||||||||||| ||||||||||||||||||||||    
T  52276380 aaaattgttgttttcatacatggggggccaaaatcgcaacgttttgaaagatagggggggaaaagtgcactttagcct 52276303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 52839139 - 52839034
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatag-gggggaaaagtgcacttta 136  Q
    |||| |||||||| | |||| |||| |||||||| |||||||||||||| ||| ||||||| |||  ||||| ||| ||| ||||||||| |||||||||    
T  52839139 gcaatggggctaaattttagaggggtaaaattgttgttttggtacttagagggtcaaaattacaaatttttggaagttagagggggaaaattgcacttta 52839040  T
Q  137 gccttt 142  Q
    ||||||    
T  52839039 gccttt 52839034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 46 - 140
Target Start/End: Complemental strand, 534594 - 534498
Alignment:
Q  46 ggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatag-gggggaaaagtgcactttagcct 140  Q
    |||||| ||||||||||  |||||||| ||||| |||| |||| || |||||||||||| |||||| || ||| |||| ||||||||||||||||||    
T  534594 ggctaaatcttagggggccaaaattgtagtttttgtacataggaggtcaaaattgcaagtttttgagagttagaggggaaaaagtgcactttagcct 534498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 84 - 139
Target Start/End: Complemental strand, 27852809 - 27852753
Alignment:
Q  84 tagggggccaaaattgcaagattttgaaagataggggg-gaaaagtgcactttagcc 139  Q
    |||||||| |||||||||| ||||||||| |||||||| ||||||||||||||||||    
T  27852809 tagggggctaaaattgcaacattttgaaacatagggggcgaaaagtgcactttagcc 27852753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 39 - 141
Target Start/End: Original strand, 46721219 - 46721323
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggg-gaaaagtgcacttta 136  Q
    ||||||||||||| |||||||||   |||||||| ||||| |||| |||||||  ||||| ||||  |||| |||| ||||||| |||||||||||||||    
T  46721219 gcaaaggggctaaatcttaggggactaaaattgtagtttttgtacatagggggttaaaatcgcaactttttaaaagttagggggagaaaagtgcacttta 46721318  T
Q  137 gcctt 141  Q
    |||||    
T  46721319 gcctt 46721323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 64 - 139
Target Start/End: Original strand, 18456088 - 18456165
Alignment:
Q  64 aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagata--ggggggaaaagtgcactttagcc 139  Q
    ||||||||||||||  ||| | |||||||||||| ||||  ||||||||| ||  |||||||||||||||||||||||    
T  18456088 aaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttaggggggggaaaagtgcactttagcc 18456165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 84 - 142
Target Start/End: Original strand, 20001956 - 20002014
Alignment:
Q  84 tagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttagccttt 142  Q
    |||||||||||||| |||| |||||||||  |||||| |||||||||| ||||||||||    
T  20001956 tagggggccaaaatcgcaacattttgaaacttaggggagaaaagtgcagtttagccttt 20002014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 86 - 132
Target Start/End: Complemental strand, 22775829 - 22775783
Alignment:
Q  86 gggggccaaaattgcaagattttgaaagataggggggaaaagtgcac 132  Q
    |||||||||||||||||  ||||||||| ||||||||||||||||||    
T  22775829 gggggccaaaattgcaactttttgaaagttaggggggaaaagtgcac 22775783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 84 - 140
Target Start/End: Complemental strand, 22500652 - 22500595
Alignment:
Q  84 tagggggccaaaattgcaagattttgaaagatagggg-ggaaaagtgcactttagcct 140  Q
    ||||||||||||||||||| ||||||||| |||||||  |||||||||| ||||||||    
T  22500652 tagggggccaaaattgcaatattttgaaacataggggccgaaaagtgcagtttagcct 22500595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 84 - 140
Target Start/End: Complemental strand, 26628081 - 26628024
Alignment:
Q  84 tagggggccaaaattgcaagattttgaaagataggggg-gaaaagtgcactttagcct 140  Q
    ||||||||||||||||||| ||||||||| |||||||| |||||||| | ||||||||    
T  26628081 tagggggccaaaattgcaacattttgaaacatagggggcgaaaagtgtagtttagcct 26628024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 84 - 140
Target Start/End: Complemental strand, 28173785 - 28173728
Alignment:
Q  84 tagggggccaaaattgcaagattttgaaagataggggg-gaaaagtgcactttagcct 140  Q
    |||||||||||||| |||| ||| ||||| |||||||| |||||||||||||||||||    
T  28173785 tagggggccaaaatcgcaacattatgaaacatagggggcgaaaagtgcactttagcct 28173728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 64 - 140
Target Start/End: Original strand, 28263136 - 28263213
Alignment:
Q  64 aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatagggg-ggaaaagtgcactttagcct 140  Q
    ||||||||||||||  ||| | |||||||||||| ||||  |||| |||| |||||| ||||||||||||||||||||    
T  28263136 aaaattgtggttttcatacatggggggccaaaatcgcaacgttttaaaagttagggggggaaaagtgcactttagcct 28263213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 84 - 139
Target Start/End: Complemental strand, 8338996 - 8338940
Alignment:
Q  84 tagggggccaaaattgcaagattttgaaagataggggg-gaaaagtgcactttagcc 139  Q
    ||||||| |||||| |||| ||||||||| |||||||| ||||||||||||||||||    
T  8338996 tagggggtcaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagcc 8338940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 84 - 139
Target Start/End: Complemental strand, 28154938 - 28154882
Alignment:
Q  84 tagggggccaaaattgcaagattttgaaagataggggg-gaaaagtgcactttagcc 139  Q
    ||||||||||||||||||| ||||||||| |||||||| |||||||| | |||||||    
T  28154938 tagggggccaaaattgcaacattttgaaacatagggggcgaaaagtgtagtttagcc 28154882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 147
Target Start/End: Original strand, 51038815 - 51038899
Alignment:
Q  64 aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatagggg-ggaaaagtgcactttagcctttatttt 147  Q
    |||||||| ||||| || | ||||||| |||||||||||  |||| |||| || ||| |||||||||||||||||||| ||||||    
T  51038815 aaaattgtagtttttgttcatagggggtcaaaattgcaactttttaaaagttaagggtggaaaagtgcactttagcctatatttt 51038899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 39 - 113
Target Start/End: Complemental strand, 31645075 - 31645000
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaag 113  Q
    ||||| ||||||| ||||||| ||  |||||||| ||||| | ||||||||||||||||||| ||| |||||||||    
T  31645075 gcaaatgggctaaatcttaggaggttaaaattgtagtttttgcacttagggggccaaaattgtaagtttttgaaag 31645000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 13 - 43
Target Start/End: Complemental strand, 5001350 - 5001320
Alignment:
Q  13 atcatcattgactgagtcaaaatagagcaaa 43  Q
    |||||||||||||||||||||||||||||||    
T  5001350 atcatcattgactgagtcaaaatagagcaaa 5001320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 13 - 43
Target Start/End: Original strand, 5029639 - 5029669
Alignment:
Q  13 atcatcattgactgagtcaaaatagagcaaa 43  Q
    |||||||||||||||||||||||||||||||    
T  5029639 atcatcattgactgagtcaaaatagagcaaa 5029669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 64 - 143
Target Start/End: Complemental strand, 18442707 - 18442626
Alignment:
Q  64 aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatagggggga--aaagtgcactttagccttta 143  Q
    |||||||| |||||  ||| | |||||||||||| ||||  ||||||||| ||||||||   ||||||||||||||||||||    
T  18442707 aaaattgtagttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggggaaagtgcactttagccttta 18442626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 64 - 143
Target Start/End: Complemental strand, 19487781 - 19487700
Alignment:
Q  64 aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatagggggga--aaagtgcactttagccttta 143  Q
    |||||||| |||||  ||| | |||||||||||| ||||  ||||||||| ||||||||   ||||||||||||||||||||    
T  19487781 aaaattgtagttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggggaaagtgcactttagccttta 19487700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 87 - 140
Target Start/End: Original strand, 19986120 - 19986174
Alignment:
Q  87 ggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcactttagcct 140  Q
    ||||||||||||||||| ||||||||  | || ||||||||||||||||||||||    
T  19986120 ggggccaaaattgcaagtttttgaaacttaagaggggaaaagtgcactttagcct 19986174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 87 - 140
Target Start/End: Original strand, 25179826 - 25179880
Alignment:
Q  87 ggggccaaaattgcaagattttgaaagataggggg-gaaaagtgcactttagcct 140  Q
    |||||||| || |||| ||||||||| |||||||| |||||||||||||||||||    
T  25179826 ggggccaatatcgcaacattttgaaacatagggggcgaaaagtgcactttagcct 25179880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 87 - 140
Target Start/End: Complemental strand, 32960698 - 32960644
Alignment:
Q  87 ggggccaaaattgcaagattttgaaagataggggg-gaaaagtgcactttagcct 140  Q
    |||||||||||||||| ||||||||| |||||||| ||||| |||| ||||||||    
T  32960698 ggggccaaaattgcaacattttgaaacatagggggcgaaaaatgcagtttagcct 32960644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 66 - 139
Target Start/End: Complemental strand, 49216321 - 49216247
Alignment:
Q  66 aattgtggttttggtacttagggggccaaaattgcaagattttgaaagatagg-ggggaaaagtgcactttagcc 139  Q
    |||||| ||||| |||| ||||||| |||||||||||  ||||||||  |||| | |||||||||||||||||||    
T  49216321 aattgtagtttttgtacatagggggtcaaaattgcaactttttgaaacttaggcgtggaaaagtgcactttagcc 49216247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 140
Target Start/End: Original strand, 13081142 - 13081199
Alignment:
Q  84 tagggggccaaaattgcaagattttgaaagatagg-ggggaaaagtgcactttagcct 140  Q
    |||||||||||||| |||| ||||||||| ||||| || |||||| ||||||||||||    
T  13081142 tagggggccaaaatcgcaacattttgaaacataggaggcgaaaagcgcactttagcct 13081199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 140
Target Start/End: Complemental strand, 34878585 - 34878528
Alignment:
Q  84 tagggggccaaaattgcaagattttgaaagataggggg-gaaaagtgcactttagcct 140  Q
    |||||||||||||| |||| ||||||||| |||||||| || ||||||| ||||||||    
T  34878585 tagggggccaaaatcgcaacattttgaaacatagggggcgagaagtgcagtttagcct 34878528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 140
Target Start/End: Complemental strand, 46673101 - 46673044
Alignment:
Q  84 tagggggccaaaattgcaagattttgaaagatagg-ggggaaaagtgcactttagcct 140  Q
    ||||||||||||||||||| ||| ||||| ||||| |  |||||||||||||||||||    
T  46673101 tagggggccaaaattgcaacattatgaaacataggagacgaaaagtgcactttagcct 46673044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 84 - 155
Target Start/End: Complemental strand, 4775906 - 4775834
Alignment:
Q  84 tagggggccaaaattgcaagattttgaaagatag-gggggaaaagtgcactttagcctttattttatttgcat 155  Q
    ||||||||||||||||||| |||||||||  ||| ||| |||||||| | ||||| |||| |||| |||||||    
T  4775906 tagggggccaaaattgcaacattttgaaacttagagggtgaaaagtgtagtttagtcttttttttctttgcat 4775834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 64 - 139
Target Start/End: Complemental strand, 46720017 - 46719941
Alignment:
Q  64 aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagata-ggggggaaaagtgcactttagcc 139  Q
    |||||||| |||||  ||| |||||||||||||| ||||  |||| |||| || |||||||||| ||||||||||||    
T  46720017 aaaattgtagtttttatacatagggggccaaaatcgcaactttttaaaagttaaggggggaaaaatgcactttagcc 46719941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 75; Significance: 3e-34; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 66 - 140
Target Start/End: Original strand, 34174010 - 34174084
Alignment:
Q  66 aattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttagcct 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34174010 aattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttagcct 34174084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 45 - 140
Target Start/End: Complemental strand, 127431 - 127336
Alignment:
Q  45 gggctaattcttaggggggaaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttagcct 140  Q
    ||||||| ||||||||||  ||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  127431 gggctaaatcttagggggctaaattgtggttttggtacttaggggaccaaaattgcaagtttttgaaagttaggggggaaaagtgcactttagcct 127336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 45 - 140
Target Start/End: Original strand, 17782558 - 17782655
Alignment:
Q  45 gggctaattcttagggggga-aaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatag-gggggaaaagtgcactttagcct 140  Q
    ||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||    
T  17782558 gggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcct 17782655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 39 - 140
Target Start/End: Original strand, 3227593 - 3227696
Alignment:
Q  39 gcaaaggggctaattcttagggggga-aaattgtggttttggtacttagggggccaaaattgcaagattttgaaagata-ggggggaaaagtgcacttta 136  Q
    |||| |||||||| ||||||||| |  ||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||    
T  3227593 gcaatggggctaaatcttaggggtgctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagggggggaaaagtgcacttta 3227692  T
Q  137 gcct 140  Q
    ||||    
T  3227693 gcct 3227696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 39 - 140
Target Start/End: Complemental strand, 31949424 - 31949321
Alignment:
Q  39 gcaaaggggctaattcttagggggga-aaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggg-gggaaaagtgcacttta 136  Q
    |||| |||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||  ||||| |||||||||||||||||    
T  31949424 gcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaaattagggagggaaaagtgcacttta 31949325  T
Q  137 gcct 140  Q
    ||||    
T  31949324 gcct 31949321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 39 - 138
Target Start/End: Complemental strand, 3227209 - 3227109
Alignment:
Q  39 gcaaaggggctaattcttagggggga-aaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttag 137  Q
    |||| |||||||| ||||| |||||  ||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||| ||||||||||||||    
T  3227209 gcaatggggctaaatcttaagggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaaattagggggggaaagtgcactttag 3227110  T
Q  138 c 138  Q
    |    
T  3227109 c 3227109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 39 - 137
Target Start/End: Complemental strand, 17781763 - 17781663
Alignment:
Q  39 gcaaaggggctaattcttagggggga-aaattgtggttttggtacttagggggccaaaattgcaagattttgaaagata-ggggggaaaagtgcacttta 136  Q
    |||| |||||||| |||||||||||  |||||||||||||||||||||||||| |||||||||||| ||||||||| || ||||||||||||||||||||    
T  17781763 gcaatggggctaaatcttaggggggttaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcacttta 17781664  T
Q  137 g 137  Q
    |    
T  17781663 g 17781663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 39 - 139
Target Start/End: Original strand, 47525366 - 47525468
Alignment:
Q  39 gcaaaggggctaattcttagggggga-aaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatag-gggggaaaagtgcacttta 136  Q
    |||| |||||||| |||||||||||  |||||||||||||| |||||||||||| ||||||||||| ||||||||| ||| |||||||||||||||||||    
T  47525366 gcaatggggctaaatcttaggggggctaaattgtggttttgatacttagggggctaaaattgcaagtttttgaaagttagagggggaaaagtgcacttta 47525465  T
Q  137 gcc 139  Q
    |||    
T  47525466 gcc 47525468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 39 - 140
Target Start/End: Original strand, 7501851 - 7501954
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatag-gggggaaaagtgcacttta 136  Q
    ||||||||||||  ||||| ||||  |||||||| |||||| |||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||    
T  7501851 gcaaaggggctacatcttaaggggccaaaattgttgttttgatacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcacttta 7501950  T
Q  137 gcct 140  Q
    ||||    
T  7501951 gcct 7501954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 39 - 140
Target Start/End: Original strand, 31949801 - 31949904
Alignment:
Q  39 gcaaaggggctaattcttagggggga-aaattgtggttttggtacttagggggccaaaattgcaagattttgaaagata-ggggggaaaagtgcacttta 136  Q
    |||| |||||||| ||||||||| |  ||||||||||||||||| ||||||||||||||||||||| ||||||||| || |||||||| |||||||||||    
T  31949801 gcaatggggctaaatcttaggggtgctaaattgtggttttggtatttagggggccaaaattgcaagtttttgaaagttagggggggaagagtgcacttta 31949900  T
Q  137 gcct 140  Q
    ||||    
T  31949901 gcct 31949904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 7500556 - 7500452
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttag 137  Q
    ||||||||||||| ||||||||||  |||||||||||||   ||||||| ||  |||||||||||| ||||||||| || ||||||||||||||||||||    
T  7500556 gcaaaggggctaaatcttagggggccaaaattgtggtttctatacttagaggatcaaaattgcaagtttttgaaagttaagggggaaaagtgcactttag 7500457  T
Q  138 ccttt 142  Q
    |||||    
T  7500456 ccttt 7500452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 40 - 126
Target Start/End: Original strand, 18372457 - 18372544
Alignment:
Q  40 caaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaa 126  Q
    |||||||||||| ||||||||||  |||||||| ||||| ||||||||||||||||||||||||| ||||||||  ||||||||||||    
T  18372457 caaaggggctaaatcttagggggccaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaaattaggggggaaaa 18372544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 66 - 132
Target Start/End: Complemental strand, 47524599 - 47524532
Alignment:
Q  66 aattgtggttttggtacttagggggccaaaattgcaagattttgaaagatag-gggggaaaagtgcac 132  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||    
T  47524599 aattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcac 47524532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 47 - 139
Target Start/End: Complemental strand, 18371518 - 18371424
Alignment:
Q  47 gctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatagg-ggggaaaagtgcactttagcc 139  Q
    ||||| ||||||||||  |||||||| ||||| ||||||| ||||||||||||||||| ||||||||| |||| |||||||||||||||||||||    
T  18371518 gctaaatcttagggggccaaaattgtagtttttgtacttaaggggccaaaattgcaagtttttgaaagttaggaggggaaaagtgcactttagcc 18371424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 128600 - 128705
Alignment:
Q  39 gcaaaggggctaattcttagggggga-aaattgtggttttggtacttagggggccaaaattgcaagattttgaaagata-ggggggaaaagtgcacttta 136  Q
    |||| |||||| | |||||||||||  |||||||||||||||||||||||||| |||||||||||  ||||||||| || || |||||||||||||||||    
T  128600 gcaatggggctgaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaaatttttgaaagttatggtgggaaaagtgcacttta 128699  T
Q  137 gccttt 142  Q
     |||||    
T  128700 accttt 128705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 39 - 139
Target Start/End: Complemental strand, 31659725 - 31659622
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatagggggg--aaaagtgcacttt 135  Q
    |||| |||||||| ||||||||||  |||||||| ||||| |||||||||||| |||||||| ||| ||||||||| ||||||||  |||||||||||||    
T  31659725 gcaatggggctaaatcttagggggccaaaattgtagtttttgtacttagggggtcaaaattgtaagtttttgaaagttagggggggtaaaagtgcacttt 31659626  T
Q  136 agcc 139  Q
    ||||    
T  31659625 agcc 31659622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 84 - 150
Target Start/End: Original strand, 8527042 - 8527109
Alignment:
Q  84 tagggggccaaaattgcaagattttgaaagataggggg-gaaaagtgcactttagcctttattttatt 150  Q
    |||||||||||||| |||| ||||||||| |||||||| |||||||||||||||||||||||||||||    
T  8527042 tagggggccaaaatcgcaacattttgaaatatagggggcgaaaagtgcactttagcctttattttatt 8527109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 40 - 140
Target Start/End: Original strand, 22630452 - 22630554
Alignment:
Q  40 caaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagata-ggggggaaaagtgcactttag 137  Q
    ||||| |||| | ||||||||||  |||||||| ||||| ||| ||||||||||||||||||||| ||||||||| || || ||||||||||||||||||    
T  22630452 caaagaggctgaatcttagggggctaaaattgtagtttttgtaattagggggccaaaattgcaagtttttgaaagttatggagggaaaagtgcactttag 22630551  T
Q  138 cct 140  Q
    |||    
T  22630552 cct 22630554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 40 - 146
Target Start/End: Complemental strand, 11658480 - 11658372
Alignment:
Q  40 caaaggggctaattctt-aggggggaaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagata-ggggggaaaagtgcactttag 137  Q
    ||||||||||||||||| ||||   |||||||| ||||| |||| |||||||| ||||||||| | ||||||||| || ||||||||||||||| |||||    
T  11658480 caaaggggctaattcttgagggaccaaaattgtagtttttgtacatagggggctaaaattgcatgtttttgaaagttaaggggggaaaagtgcaatttag 11658381  T
Q  138 cctttattt 146  Q
    ||| |||||    
T  11658380 cctatattt 11658372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 39 - 134
Target Start/End: Original strand, 14999154 - 14999249
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactt 134  Q
    ||||||||||||| |||||||| |  |||||||| ||||| ||| |||||||| |||||||||||| ||||||||  ||||||||||||||||||||    
T  14999154 gcaaaggggctaaatcttagggcgccaaaattgtagtttttgtatttagggggtcaaaattgcaag-ttttgaaaattaggggggaaaagtgcactt 14999249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 84 - 148
Target Start/End: Original strand, 20636866 - 20636931
Alignment:
Q  84 tagggggccaaaattgcaagattttgaaagataggggg-gaaaagtgcactttagcctttatttta 148  Q
    ||||||| |||||| |||| ||||||||| |||||||| |||||||||||||||||||||||||||    
T  20636866 tagggggtcaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagcctttatttta 20636931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 68 - 147
Target Start/End: Original strand, 20163585 - 20163665
Alignment:
Q  68 ttgtggttttggtacttagggggccaaaattgcaagattttgaaagatagggg-ggaaaagtgcactttagcctttatttt 147  Q
    |||| ||||| |||| ||||| |||||||||||||| ||||||||| |||||| ||| |||||||||||||||||| ||||    
T  20163585 ttgtagtttttgtacatagggagccaaaattgcaagtttttgaaagttaggggtggagaagtgcactttagcctttttttt 20163665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 39 - 136
Target Start/End: Original strand, 42886285 - 42886384
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatagg-ggggaaaagtgcacttta 136  Q
    ||||| ||||||| ||||||||||  |||||||| ||||| ||| |||||||| |||||||||||  ||||||||| |||| || |||||||||||||||    
T  42886285 gcaaatgggctaaatcttagggggctaaaattgtagtttttgtatttagggggtcaaaattgcaaatttttgaaagttaggaggagaaaagtgcacttta 42886384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 39 - 140
Target Start/End: Complemental strand, 21505516 - 21505415
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttag 137  Q
    ||||||||||||| ||||| ||||  |||||||| ||||| |||  | |||||||||||| ||||  ||||||||| ||||||| |||||||||||||||    
T  21505516 gcaaaggggctaaatcttatggggtcaaaattgtagtttttgtatatcgggggccaaaatcgcaactttttgaaagttaggggg-aaaagtgcactttag 21505418  T
Q  138 cct 140  Q
    |||    
T  21505417 cct 21505415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 39 - 112
Target Start/End: Complemental strand, 22629588 - 22629514
Alignment:
Q  39 gcaaaggggctaattcttaggggg-gaaaattgtggttttggtacttagggggccaaaattgcaagattttgaaa 112  Q
    ||||||||||||| ||||||||||  |||||||| ||||| ||||||||| |||||||||| |||| ||||||||    
T  22629588 gcaaaggggctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattacaagtttttgaaa 22629514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 39 - 141
Target Start/End: Original strand, 11662550 - 11662654
Alignment:
Q  39 gcaaaggggctaattcttaggggg-gaaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcacttta 136  Q
    |||||||||||||||||| |||||  |||||| | ||||| |||| ||| | || ||||||||||| ||||||||| | ||||||||||| |||||||||    
T  11662550 gcaaaggggctaattcttggggggccaaaattatagtttttgtacatagagagctaaaattgcaagtttttgaaagttaaggggggaaaaatgcacttta 11662649  T
Q  137 gcctt 141  Q
     ||||    
T  11662650 acctt 11662654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 39 - 148
Target Start/End: Complemental strand, 47369883 - 47369772
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatagggg-ggaaaagtgcacttta 136  Q
    ||||||||||||| ||||| ||||  |||||| | ||||| ||||||| | ||| ||||||||||| ||||||||| ||||||   ||||||||| ||||    
T  47369883 gcaaaggggctaaatcttaaggggccaaaattatagtttttgtacttatgaggctaaaattgcaagtttttgaaagttaggggaaaaaaagtgcatttta 47369784  T
Q  137 gcctttatttta 148  Q
    |||||| |||||    
T  47369783 gcctttttttta 47369772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 84 - 141
Target Start/End: Complemental strand, 27869252 - 27869194
Alignment:
Q  84 tagggggccaaaattgcaagattttgaaagataggggg-gaaaagtgcactttagcctt 141  Q
    ||||||| |||||| |||| ||||||||| |||||||| ||||||||||||||||||||    
T  27869252 tagggggtcaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagcctt 27869194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 84 - 141
Target Start/End: Original strand, 42271580 - 42271638
Alignment:
Q  84 tagggggccaaaattgcaagattttgaaagataggggg-gaaaagtgcactttagcctt 141  Q
    |||||||| |||||||||| ||||| ||| |||||||| ||||||||||||||||||||    
T  42271580 tagggggcaaaaattgcaacattttaaaacatagggggcgaaaagtgcactttagcctt 42271638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 84 - 139
Target Start/End: Original strand, 36746751 - 36746806
Alignment:
Q  84 tagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttagcc 139  Q
    ||||||||||||||||||| ||||| ||| ||||||| |||||||| | |||||||    
T  36746751 tagggggccaaaattgcaacattttaaaacataggggcgaaaagtgtagtttagcc 36746806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 84 - 141
Target Start/End: Complemental strand, 3562489 - 3562431
Alignment:
Q  84 tagggggccaaaattgcaagattttgaaagataggg-gggaaaagtgcactttagcctt 141  Q
    |||||||||||||| |||| ||||||||| |||||| | ||||||||||||||| ||||    
T  3562489 tagggggccaaaatcgcaacattttgaaacatagggagcgaaaagtgcactttaacctt 3562431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 84 - 141
Target Start/End: Complemental strand, 19195270 - 19195212
Alignment:
Q  84 tagggggccaaaattgcaagattttgaaagataggggg-gaaaagtgcactttagcctt 141  Q
    |||||| |||||||||||| ||||||||| |||||||| ||||| |||| |||||||||    
T  19195270 taggggaccaaaattgcaatattttgaaacatagggggtgaaaaatgcagtttagcctt 19195212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 87 - 140
Target Start/End: Complemental strand, 21690469 - 21690415
Alignment:
Q  87 ggggccaaaattgcaagattttgaaagatagggg-ggaaaagtgcactttagcct 140  Q
    |||||||||||||||||||||||||| |||||||  |||||||| | ||||||||    
T  21690469 ggggccaaaattgcaagattttgaaacataggggacgaaaagtgtagtttagcct 21690415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 82 - 140
Target Start/End: Complemental strand, 14998067 - 14998007
Alignment:
Q  82 cttagggggccaaaattgcaagattttgaaagataggggggaaaa--gtgcactttagcct 140  Q
    |||||||||||||||||| ||| ||||||||| ||||||  ||||  ||||||||||||||    
T  14998067 cttagggggccaaaattgtaagtttttgaaagttaggggaaaaaaaggtgcactttagcct 14998007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 140
Target Start/End: Complemental strand, 24597573 - 24597516
Alignment:
Q  84 tagggggccaaaattgcaagattttgaaagataggggg-gaaaagtgcactttagcct 140  Q
    ||||||||||||||  ||| ||||||||| ||||| || |||||||||||||||||||    
T  24597573 tagggggccaaaatcacaacattttgaaacataggaggcgaaaagtgcactttagcct 24597516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 85 - 140
Target Start/End: Original strand, 5490924 - 5490980
Alignment:
Q  85 agggggccaaaattgcaagattttgaaagataggggg-gaaaagtgcactttagcct 140  Q
    ||||||||||||||||||  |||||||| |||||||| |||||||||| || |||||    
T  5490924 agggggccaaaattgcaactttttgaaacatagggggtgaaaagtgcatttaagcct 5490980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 84 - 140
Target Start/End: Complemental strand, 21224409 - 21224353
Alignment:
Q  84 tagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttagcct 140  Q
    |||||| |||||||||||| ||||||||| ||| ||| ||||| |||| ||||||||    
T  21224409 taggggaccaaaattgcaacattttgaaacataagggcgaaaaatgcagtttagcct 21224353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 84 - 147
Target Start/End: Original strand, 39182181 - 39182245
Alignment:
Q  84 tagggggccaaaattgcaagattttgaaagataggggg-gaaaagtgcactttagcctttatttt 147  Q
    ||||||| ||||||||||| ||||| |||  ||||||| |||||||||| |||||||||| ||||    
T  39182181 tagggggtcaaaattgcaacatttttaaacttagggggcgaaaagtgcagtttagcctttttttt 39182245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 2e-31; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 39 - 150
Target Start/End: Complemental strand, 52827449 - 52827336
Alignment:
Q  39 gcaaaggggctaattcttagggggga-aaattgtggttttggtacttagggggccaaaattgcaagattttgaaagata-ggggggaaaagtgcacttta 136  Q
    |||| |||||||| |||||||||||  |||||||||||||||||||||||||| |||||||||||| ||||||||| || ||||||||||||||||||||    
T  52827449 gcaatggggctaaatcttaggggggttaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcacttta 52827350  T
Q  137 gcctttattttatt 150  Q
    |||||| |||||||    
T  52827349 gccttttttttatt 52827336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 39 - 139
Target Start/End: Complemental strand, 41364930 - 41364829
Alignment:
Q  39 gcaaaggggctaattcttagggggga-aaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttag 137  Q
    |||| |||||||| |||||||||||  ||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||| ||||||||||||||||    
T  41364930 gcaatggggctaaatcttaggggggctaaattgtggttttggtatttagggggccaaaattgcaagtttttgaaagttaggggagaaaagtgcactttag 41364831  T
Q  138 cc 139  Q
    ||    
T  41364830 cc 41364829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 39 - 136
Target Start/End: Original strand, 45149969 - 45150068
Alignment:
Q  39 gcaaaggggctaattcttagggggg--aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcacttta 136  Q
    ||||||||||||| |||||||||||  |||||||| ||||| ||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  45149969 gcaaaggggctaaatcttagggggggcaaaattgttgtttttgtacttaaggggccaaaattgcaagtttttgaaagttaggggggaaaagtgcacttta 45150068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 140 - 201
Target Start/End: Original strand, 26371972 - 26372033
Alignment:
Q  140 tttattttatttgcatgcattctattgcatgtgactctaatatatgggagaaattaaattgt 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26371972 tttattttatttgcatgcattctattgcatgtgactctaatatatgggagaaattaaattgt 26372033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 39 - 147
Target Start/End: Original strand, 41366130 - 41366239
Alignment:
Q  39 gcaaaggggctaattcttaggggggaaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatagg-ggggaaaagtgcactttag 137  Q
    |||| |||||||| ||||||||||  |||||||||||||| |||||| ||||| ||||||||| | ||||||||| |||| |||||||||||||||||||    
T  41366130 gcaatggggctaaatcttagggggctaaattgtggttttgatacttaaggggctaaaattgcatgtttttgaaagttaggaggggaaaagtgcactttag 41366229  T
Q  138 cctttatttt 147  Q
    ||||||||||    
T  41366230 cctttatttt 41366239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 39 - 136
Target Start/End: Original strand, 52828069 - 52828168
Alignment:
Q  39 gcaaaggggctaattcttagggggga-aaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatag-gggggaaaagtgcacttta 136  Q
    |||| |||||||| |||||||||||  |||||||||||||||||||||||| |||||||||||||| ||||||||  ||| |||||||||||||||||||    
T  52828069 gcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggagccaaaattgcaagtttttgaaaattagagggggaaaagtgcacttta 52828168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 39 - 139
Target Start/End: Original strand, 39699766 - 39699867
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttag 137  Q
    |||| |||||||| ||||||||||  |||||||| ||||  |||||||||||| |||||||||||| | ||||||| |||||||||||||||||||||||    
T  39699766 gcaatggggctaaatcttagggggccaaaattgtagtttctgtacttagggggtcaaaattgcaagttattgaaagttaggggggaaaagtgcactttag 39699865  T
Q  138 cc 139  Q
    ||    
T  39699866 cc 39699867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 64 - 140
Target Start/End: Complemental strand, 14999360 - 14999284
Alignment:
Q  64 aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttagcct 140  Q
    |||||||| ||||| |||||||||||| |||||||||||| ||||||||| |||||||||||||| |||||||||||    
T  14999360 aaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagttaggggggaaaagtacactttagcct 14999284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 39 - 140
Target Start/End: Complemental strand, 24422902 - 24422799
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcacttta 136  Q
    |||| |||||||| ||||||||||  |||||||| ||||| |||||||||||| |||||||||||| ||||||||| | |||||| ||||||||||||||    
T  24422902 gcaatggggctaaatcttagggggccaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagttaagggggtaaaagtgcacttta 24422803  T
Q  137 gcct 140  Q
    ||||    
T  24422802 gcct 24422799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 64 - 143
Target Start/End: Original strand, 45157234 - 45157313
Alignment:
Q  64 aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttagccttta 143  Q
    |||||||| ||||| |||| |||||||||||||||||||| ||||||||  |||||||| ||||||||||||||||||||    
T  45157234 aaaattgtagtttttgtacatagggggccaaaattgcaagtttttgaaacttagggggggaaagtgcactttagccttta 45157313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 39 - 136
Target Start/End: Complemental strand, 7983151 - 7983053
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcacttta 136  Q
    |||| |||| ||| ||||||||||| ||||||||||||||| ||| |||||||||||||||||||| | ||||||| || ||| |||||||||||||||    
T  7983151 gcaatggggataaatcttaggggggcaaaattgtggttttgatacatagggggccaaaattgcaagttgttgaaagttacgggagaaaagtgcacttta 7983053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 39 - 148
Target Start/End: Complemental strand, 35594317 - 35594208
Alignment:
Q  39 gcaaaggggctaattcttaggggggaaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatagggg-ggaaaagtgcactttag 137  Q
    ||||||||||||| | |||||||  |||||||| |||||  |||||||||| | ||||||||||| ||||||||| |||||| |||||||||||||||||    
T  35594317 gcaaaggggctaaattttaggggtcaaaattgtagttttaatacttaggggtc-aaaattgcaagtttttgaaagttaggggtggaaaagtgcactttag 35594219  T
Q  138 cctttatttta 148  Q
    |||||| ||||    
T  35594218 cctttaattta 35594208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 64 - 141
Target Start/End: Complemental strand, 52275044 - 52274966
Alignment:
Q  64 aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatagggggg-aaaagtgcactttagcctt 141  Q
    |||||||| ||||| |||||||||||| |||||||||||| ||||||||| |||||||| |||||||||||||||||||    
T  52275044 aaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagttaggggggtaaaagtgcactttagcctt 52274966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 39 - 147
Target Start/End: Original strand, 37526877 - 37526986
Alignment:
Q  39 gcaaaggggctaattcttaggggggaaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcactttag 137  Q
    ||||||||||||| |||||||||  |||||||||||||   || |||||| |||||||||||||| ||||||||| | ||||||||||||| |||||||     
T  37526877 gcaaaggggctaaatcttaggggccaaaattgtggtttctatatttagggagccaaaattgcaagtttttgaaagttaaggggggaaaagtacactttaa 37526976  T
Q  138 cctttatttt 147  Q
    |||| |||||    
T  37526977 ccttaatttt 37526986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 39 - 150
Target Start/End: Complemental strand, 51684468 - 51684355
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagata-ggggggaaaagtgcacttta 136  Q
    ||||||||||||| ||||||||||  |||||||| |||||  ||| |||||||||||||||||||  |||| |||| || ||||||||||||||||||||    
T  51684468 gcaaaggggctaaatcttagggggccaaaattgtagtttttatacatagggggccaaaattgcaactttttaaaagttaaggggggaaaagtgcacttta 51684369  T
Q  137 gcctttattttatt 150  Q
    ||| | ||||||||    
T  51684368 gccatgattttatt 51684355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 39 - 141
Target Start/End: Original strand, 24426074 - 24426178
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatag-gggggaaaagtgcacttta 136  Q
    |||| |||||||| |||||||||   |||||||| ||||| ||||||||||||||||||||||||| ||||||||| ||| ||||| |||||||||||||    
T  24426074 gcaatggggctaaatcttaggggactaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagttagaggggggaaagtgcacttta 24426173  T
Q  137 gcctt 141  Q
     ||||    
T  24426174 acctt 24426178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 39 - 140
Target Start/End: Original strand, 51685764 - 51685867
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatag-gggggaaaagtgcacttta 136  Q
    ||||||||||||| ||||||||||  |||||||| ||||| |||| ||| |||||||||| ||||  ||||||||| ||| |||||||||||||||||||    
T  51685764 gcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacatagagggccaaaatcgcaactttttgaaagttagagggggaaaagtgcacttta 51685863  T
Q  137 gcct 140  Q
    ||||    
T  51685864 gcct 51685867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 39 - 139
Target Start/End: Original strand, 36613903 - 36614005
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatagggg-ggaaaagtgcacttta 136  Q
    |||||| |||||| ||||||||||  |||||||| ||||| |||||||||||||||||||| |||| |||| |||| |||||| |||||| |||||||||    
T  36613903 gcaaagaggctaaatcttagggggtcaaaattgtagtttttgtacttagggggccaaaattacaagtttttaaaagttaggggaggaaaaatgcacttta 36614002  T
Q  137 gcc 139  Q
    |||    
T  36614003 gcc 36614005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 39 - 139
Target Start/End: Complemental strand, 45148682 - 45148581
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcacttta 136  Q
    ||||||||| ||| ||||||||||| |||||||| |||||  |||||||||||||||||||||||| ||||||||| | || ||| ||||||||||||||    
T  45148682 gcaaaggggttaaatcttaggggggcaaaattgtagttttt-tacttagggggccaaaattgcaagtttttgaaagttaagcgggaaaaagtgcacttta 45148584  T
Q  137 gcc 139  Q
    |||    
T  45148583 gcc 45148581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 33088616 - 33088721
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatag-gggggaaaagtgcacttta 136  Q
    ||||||||||||| |||||||| || |||||||| ||||| |||||||  ||| |||||||||||| ||||||| | ||| | |||||||||||||||||    
T  33088616 gcaaaggggctaaatcttagggaggcaaaattgtagtttttgtacttaaagggtcaaaattgcaagtttttgaatgttagagagggaaaagtgcacttta 33088715  T
Q  137 gccttt 142  Q
    ||||||    
T  33088716 gccttt 33088721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 41 - 136
Target Start/End: Complemental strand, 43058885 - 43058789
Alignment:
Q  41 aaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcacttta 136  Q
    ||||||||||| |||||| |||  |||||||| ||||| |||||||||||| |||||||||||| |||| |||| ||||||| ||||||| ||||||    
T  43058885 aaaggggctaaatcttagagggctaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttcaaagttagggggaaaaagtgtacttta 43058789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 39 - 140
Target Start/End: Original strand, 23980465 - 23980568
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatag-gggggaaaagtgcacttta 136  Q
    ||||||||||||| ||||||| |   |||||| | ||||| |||||||||| |||||||||||||| |||| |||| ||| |||||||||||||||||||    
T  23980465 gcaaaggggctaaatcttaggagaccaaaattatagtttttgtacttagggagccaaaattgcaagttttttaaagttagagggggaaaagtgcacttta 23980564  T
Q  137 gcct 140  Q
    ||||    
T  23980565 gcct 23980568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 64 - 140
Target Start/End: Original strand, 11437224 - 11437301
Alignment:
Q  64 aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcactttagcct 140  Q
    |||||||| ||||| ||||||| ||| ||||||||||||| ||||||||| | |||||| ||||||||||||||||||    
T  11437224 aaaattgtagtttttgtacttaagggaccaaaattgcaagtttttgaaagttaagggggaaaaagtgcactttagcct 11437301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 39 - 154
Target Start/End: Complemental strand, 50680433 - 50680319
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttag 137  Q
    ||||||||| ||| |||||||||   |||||| | |||||  |||||||||||||||||||||||| ||||| ||| || ||||||||| |||||||||     
T  50680433 gcaaaggggttaaatcttaggggactaaaattatagtttttatacttagggggccaaaattgcaagtttttggaagttaagggggaaaaatgcactttaa 50680334  T
Q  138 cctttattttatttgca 154  Q
    ||  |||||||||||||    
T  50680333 cc--tattttatttgca 50680319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 64 - 140
Target Start/End: Complemental strand, 7674602 - 7674527
Alignment:
Q  64 aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttagcct 140  Q
    |||||||| ||||| ||||||||||  ||||||||||||| |||| |||| ||||||||||||| ||||||||||||    
T  7674602 aaaattgtagtttttgtacttagggc-ccaaaattgcaagtttttaaaagttaggggggaaaagggcactttagcct 7674527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 39 - 149
Target Start/End: Complemental strand, 11436144 - 11436032
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatag-gggggaaaagtgcacttta 136  Q
    ||||| ||| ||| ||||||||||  |||||||| |||||  ||||||   ||||||||||||||| ||||||||| ||  |||||||||||||||||||    
T  11436144 gcaaatgggttaaatcttagggggccaaaattgtagtttttatacttaaaaggccaaaattgcaagtttttgaaagttaaagggggaaaagtgcacttta 11436045  T
Q  137 gcctttattttat 149  Q
    |||||| ||||||    
T  11436044 gccttttttttat 11436032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 39 - 140
Target Start/End: Original strand, 35067001 - 35067104
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagata-ggggggaaaagtgcacttta 136  Q
    ||||||||||||| | ||||||||  |||||||| ||||| || | |||||||||||||| ||||  ||||||||  || ||||||||||||||||||||    
T  35067001 gcaaaggggctaaatattagggggccaaaattgtagtttttgttcatagggggccaaaatcgcaactttttgaaacttaaggggggaaaagtgcacttta 35067100  T
Q  137 gcct 140  Q
    ||||    
T  35067101 gcct 35067104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 67 - 139
Target Start/End: Original strand, 39222501 - 39222575
Alignment:
Q  67 attgtggttttggtacttagggggccaaaattgcaagattttgaaag--ataggggggaaaagtgcactttagcc 139  Q
    ||||| |||||  |||||||||||||||||||||||| |||||||||  | |||||| |||||||||||||||||    
T  39222501 attgtagtttttatacttagggggccaaaattgcaagtttttgaaagttaaagggggtaaaagtgcactttagcc 39222575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 84 - 141
Target Start/End: Complemental strand, 4059578 - 4059520
Alignment:
Q  84 tagggggccaaaattgcaagattttgaaagataggggg-gaaaagtgcactttagcctt 141  Q
    |||||||||||||| |||| ||||||||| |||||||| ||||||||||||||||||||    
T  4059578 tagggggccaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagcctt 4059520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 46 - 147
Target Start/End: Complemental strand, 39698657 - 39698555
Alignment:
Q  46 ggctaattcttaggggggaaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcactttagcctttat 144  Q
    |||||| |||||| ||  |||||| | ||||  ||||||||||||||||||||| ||| |||| |||| | ||||||| ||||||||||||||||||| |    
T  39698657 ggctaaatcttagtggccaaaattatagtttctgtacttagggggccaaaattgaaagtttttaaaagttaaggggggtaaagtgcactttagccttttt 39698558  T
Q  145 ttt 147  Q
    |||    
T  39698557 ttt 39698555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 39153115 - 39153220
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcacttta 136  Q
    ||||||||| ||| |||||| |||  |||||||| ||||| |||| || ||||||||||||||||| ||||||||  | |||||| ||||||||||||||    
T  39153115 gcaaaggggttaaatcttagagggtcaaaattgtagtttttgtacataaggggccaaaattgcaagtttttgaaacttaagggggaaaaagtgcacttta 39153214  T
Q  137 gccttt 142  Q
     |||||    
T  39153215 accttt 39153220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 39 - 143
Target Start/End: Original strand, 43378712 - 43378817
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttag 137  Q
    ||||||| ||||| ||||||| ||  ||||||||  |||| |||||||||||  |||||||| ||| ||||||||| || | | |||||||||||||||     
T  43378712 gcaaaggtgctaaatcttaggtggtcaaaattgtaatttttgtacttaggggatcaaaattgtaagtttttgaaagttaagagagaaaagtgcactttaa 43378811  T
Q  138 ccttta 143  Q
    ||||||    
T  43378812 ccttta 43378817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 84 - 140
Target Start/End: Complemental strand, 46432272 - 46432215
Alignment:
Q  84 tagggggccaaaattgcaagattttgaaagataggggg-gaaaagtgcactttagcct 140  Q
    |||||||||||||| |||| ||| ||||| |||||||| |||||||||||||||||||    
T  46432272 tagggggccaaaatcgcaacattatgaaacatagggggcgaaaagtgcactttagcct 46432215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 39 - 140
Target Start/End: Original strand, 35595191 - 35595295
Alignment:
Q  39 gcaaaggggctaattcttaggggggaaaattg-tggttttggtacttagggggccaaaattgc-aagattttgaaagatag-gggggaaaagtgcacttt 135  Q
    ||||||||||||| |||||||||  ||||||| | |||||  ||| ||||||| ||||||||| ||| |||| |||| ||| ||||||||||| ||||||    
T  35595191 gcaaaggggctaaatcttaggggccaaaattgttagtttttatacatagggggtcaaaattgctaagttttttaaagttagagggggaaaagtacacttt 35595290  T
Q  136 agcct 140  Q
    |||||    
T  35595291 agcct 35595295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 39 - 141
Target Start/End: Complemental strand, 36612954 - 36612851
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagata-ggggggaaaagtgcacttta 136  Q
    |||||||| |||| ||||||||||  |||||||| ||||| ||||||| |   ||||||||||||  ||||||||| || |||||||||| |||||||||    
T  36612954 gcaaagggactaaatcttagggggttaaaattgtagtttttgtacttaagat-ccaaaattgcaaatttttgaaagttaaggggggaaaaatgcacttta 36612856  T
Q  137 gcctt 141  Q
    |||||    
T  36612855 gcctt 36612851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 141
Target Start/End: Original strand, 24750020 - 24750075
Alignment:
Q  87 ggggccaaaattgcaagattttgaaagataggggg-gaaaagtgcactttagcctt 141  Q
    |||||||||||||||| ||||| ||| |||||||| |||||||||| |||||||||    
T  24750020 ggggccaaaattgcaacattttaaaacatagggggcgaaaagtgcagtttagcctt 24750075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 64 - 142
Target Start/End: Complemental strand, 44404518 - 44404439
Alignment:
Q  64 aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagata-ggggggaaaagtgcactttagccttt 142  Q
    |||||| | ||||| ||||||||||||| |||||||| || ||||||||| || | ||| ||||||||| ||||||||||    
T  44404518 aaaattatagtttttgtacttagggggctaaaattgctagtttttgaaagttatgagggaaaaagtgcattttagccttt 44404439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 84 - 138
Target Start/End: Complemental strand, 48471919 - 48471864
Alignment:
Q  84 tagggggccaaaattgcaagattttgaaagatagggg-ggaaaagtgcactttagc 138  Q
    |||||||||||||| |||| ||||||||| |||||||  |||||||||||||||||    
T  48471919 tagggggccaaaatcgcaacattttgaaacataggggacgaaaagtgcactttagc 48471864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 39 - 140
Target Start/End: Original strand, 7675458 - 7675560
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttag 137  Q
    ||||||||||||| ||||||||||  |||||| |  ||||  |||||||| || |||||||||||| ||||||||| ||  || | ||||| ||||||||    
T  7675458 gcaaaggggctaaatcttagggggtcaaaattataatttttttacttaggagggcaaaattgcaagtttttgaaagttaaaggtggaaagtacactttag 7675557  T
Q  138 cct 140  Q
    |||    
T  7675558 cct 7675560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 64 - 126
Target Start/End: Complemental strand, 39152007 - 39151945
Alignment:
Q  64 aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaa 126  Q
    |||||||| ||||| |||| ||||||||||||||| |||| ||||||||  || |||||||||    
T  39152007 aaaattgtagtttttgtacatagggggccaaaattacaagtttttgaaacttaagggggaaaa 39151945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 140
Target Start/End: Complemental strand, 51719179 - 51719122
Alignment:
Q  84 tagggggccaaaattgcaagattttgaaagatag-gggggaaaagtgcactttagcct 140  Q
    ||||||||||||||||||| ||| ||||| |||| ||| |||||||||| ||||||||    
T  51719179 tagggggccaaaattgcaacattatgaaacatagagggcgaaaagtgcagtttagcct 51719122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 142
Target Start/End: Original strand, 14999995 - 15000059
Alignment:
Q  79 gtacttagggggccaaaattgcaagattttgaaagataggg-gggaaaagtgcactttagccttt 142  Q
    |||||||||||  |||||||||||| |||| |||| ||||| || ||||||| ||||||||||||    
T  14999995 gtacttaggggatcaaaattgcaagtttttaaaagttagggaggaaaaagtgaactttagccttt 15000059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 84 - 139
Target Start/End: Original strand, 24962201 - 24962257
Alignment:
Q  84 tagggggccaaaattgcaagattttgaaagataggggg-gaaaagtgcactttagcc 139  Q
    ||||||||||||| ||||| ||||||||| |||||||| ||||||| || |||||||    
T  24962201 tagggggccaaaactgcaacattttgaaacatagggggcgaaaagtacagtttagcc 24962257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 73 - 136
Target Start/End: Original strand, 52276197 - 52276261
Alignment:
Q  73 gttttggtacttagggggccaaaattgcaagattttgaaagatag-gggggaaaagtgcacttta 136  Q
    ||||| |||||||||||||||||||| |||  ||||||||| |||  |||| |||||||||||||    
T  52276197 gtttttgtacttagggggccaaaattacaaatttttgaaagttagaagggggaaagtgcacttta 52276261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 4e-30; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 39 - 148
Target Start/End: Complemental strand, 36449880 - 36449769
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcacttta 136  Q
    |||||||| ||||||||| |||||| |||||||| ||||| ||||||||||||||||||||||||| ||||||||| | |||||||||||||||||||||    
T  36449880 gcaaagggcctaattcttgggggggcaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcacttta 36449781  T
Q  137 gcctttatttta 148  Q
    |||| |||||||    
T  36449780 gcctatatttta 36449769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 39 - 150
Target Start/End: Original strand, 38840492 - 38840605
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcacttta 136  Q
    |||| |||||||| ||||||||||  |||||||| ||||| ||||||||||||| ||||||||||| ||||||||| | |||||||||||||||||||||    
T  38840492 gcaatggggctaaatcttagggggctaaaattgtagtttttgtacttagggggctaaaattgcaagtttttgaaagttaaggggggaaaagtgcacttta 38840591  T
Q  137 gcctttattttatt 150  Q
    |||| | |||||||    
T  38840592 gcctattttttatt 38840605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 46 - 139
Target Start/End: Original strand, 1034475 - 1034570
Alignment:
Q  46 ggctaattcttagggggga-aaattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcactttagcc 139  Q
    |||||| |||||||||||  |||||||||||||||||| |||||||||||||||||| | ||||||||| | ||||||||||||||||||||||||    
T  1034475 ggctaaatcttaggggggctaaattgtggttttggtacgtagggggccaaaattgcatgtttttgaaagttaaggggggaaaagtgcactttagcc 1034570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 39 - 136
Target Start/End: Complemental strand, 28618023 - 28617926
Alignment:
Q  39 gcaaaggggctaattcttaggggggaaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcacttta 136  Q
    ||||||||||||| |||||||||| |||||||  ||||| |||||| |||||||||||||||||||||||||||| ||||| | |||| || ||||||    
T  28618023 gcaaaggggctaaatcttagggggcaaaattgaagtttttgtacttggggggccaaaattgcaagattttgaaagttagggagaaaaaatgtacttta 28617926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 39 - 141
Target Start/End: Complemental strand, 22848293 - 22848189
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatagggggg-aaaagtgcacttta 136  Q
    ||||||||||||| |||||||| |  |||||||| ||||| ||| ||||||| ||||||||||||| ||||||||| |||||||| ||||||||||||||    
T  22848293 gcaaaggggctaaatcttagggagccaaaattgtagtttttgtatttaggggaccaaaattgcaagtttttgaaagttaggggggtaaaagtgcacttta 22848194  T
Q  137 gcctt 141  Q
    |||||    
T  22848193 gcctt 22848189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 44 - 140
Target Start/End: Original strand, 7899886 - 7899984
Alignment:
Q  44 ggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcactttagcct 140  Q
    |||||||| ||||||||||  |||||||| ||||  ||||||||||| ||||||||||||| ||||||||| | |||||||||||||||||||||||||    
T  7899886 ggggctaaatcttagggggctaaaattgtagtttctgtacttaggggaccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcct 7899984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 47 - 140
Target Start/End: Original strand, 18905995 - 18906089
Alignment:
Q  47 gctaattcttaggggggaaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatag-gggggaaaagtgcactttagcct 140  Q
    ||||| |||||||||  |||||||| ||||| ||||||||||||| ||||||||||| ||||||||| |||  ||||||||||||||||||||||    
T  18905995 gctaaatcttaggggctaaaattgtagtttttgtacttagggggctaaaattgcaagtttttgaaagttagaaggggaaaagtgcactttagcct 18906089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 41 - 140
Target Start/End: Complemental strand, 18904467 - 18904366
Alignment:
Q  41 aaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcactttagc 138  Q
    ||||||||||||||||||||    |||||||| ||||| ||||||| ||||||||||||||| | ||||||||| | |||||||||||||||||||||||    
T  18904467 aaaggggctaattcttagggaaccaaaattgtagtttttgtacttaaggggccaaaattgcacgtttttgaaagttaaggggggaaaagtgcactttagc 18904368  T
Q  139 ct 140  Q
    ||    
T  18904367 ct 18904366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 64 - 143
Target Start/End: Original strand, 802616 - 802695
Alignment:
Q  64 aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttagccttta 143  Q
    |||||||| ||||| ||||  ||||||||||||||||||| ||||||||  |||||||||||||| ||||||||||||||    
T  802616 aaaattgtagtttttgtacacagggggccaaaattgcaagtttttgaaacttaggggggaaaagtacactttagccttta 802695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 39 - 136
Target Start/End: Original strand, 36450920 - 36451018
Alignment:
Q  39 gcaaaggggctaattcttagggggga-aaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcacttta 136  Q
    ||||||| |||||||||| |||||   ||||||| ||||  ||||||||||| ||||||||||||| ||||||||| || |||||||||||||||||||    
T  36450920 gcaaaggagctaattcttggggggccgaaattgtagtttctgtacttaggggaccaaaattgcaagtttttgaaagttaagggggaaaagtgcacttta 36451018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 11258810 - 11258915
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatag-gggggaaaagtgcacttta 136  Q
    |||| |||||||| |||||||||   |||||||| ||||| ||||||||||||||||||||||||| ||||||||| ||| | ||| ||| |||||||||    
T  11258810 gcaatggggctaaatcttaggggactaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagttagagaggggaaaatgcacttta 11258909  T
Q  137 gccttt 142  Q
    ||||||    
T  11258910 gccttt 11258915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 39 - 140
Target Start/End: Complemental strand, 18797349 - 18797245
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatagggg--ggaaaagtgcacttt 135  Q
    ||||||||||||| | ||||||||  |||||||| |||||  |||||| |||| |||||||||||| ||||||||| ||||||  |||||||||||||||    
T  18797349 gcaaaggggctaaattttagggggtcaaaattgtagttttaatacttaaggggtcaaaattgcaagtttttgaaagttagggggtggaaaagtgcacttt 18797250  T
Q  136 agcct 140  Q
    |||||    
T  18797249 agcct 18797245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 39 - 147
Target Start/End: Original strand, 18300724 - 18300831
Alignment:
Q  39 gcaaaggggctaattcttaggggggaaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttagc 138  Q
    ||||||||||||| |  ||||||  |||||||| ||||| |||||||||||| |||||||||||| || |||||| || |||||||||||||| ||||||    
T  18300724 gcaaaggggctaaattataggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttatgaaagtta-gggggaaaagtgcaatttagc 18300822  T
Q  139 ctttatttt 147  Q
     | ||||||    
T  18300823 ttatatttt 18300831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 47 - 140
Target Start/End: Original strand, 11938796 - 11938890
Alignment:
Q  47 gctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatagggg-ggaaaagtgcactttagcct 140  Q
    ||||||||||||||||| |||||| |  ||||| |||||||| | ||||||||||||| ||||||||| |||||| ||||||||||||||||||||    
T  11938796 gctaattcttaggggggcaaaattatatttttg-tacttaggagaccaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagcct 11938890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 39 - 140
Target Start/End: Original strand, 23869534 - 23869636
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcacttta 136  Q
    ||||||||||||| |||||||| |  |||||||| ||||| ||| ||||||||||||||||||||| |||| |||| | |||| ||||||||||||||||    
T  23869534 gcaaaggggctaaatcttagggagctaaaattgtagtttttgtatttagggggccaaaattgcaag-tttttaaagttaagggtggaaaagtgcacttta 23869632  T
Q  137 gcct 140  Q
    ||||    
T  23869633 gcct 23869636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 64 - 140
Target Start/End: Complemental strand, 18869000 - 18868923
Alignment:
Q  64 aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatagggg-ggaaaagtgcactttagcct 140  Q
    |||||||| ||||| ||| ||||| ||||||||||||||| ||||||||| |||||| |||||||| |||||||||||    
T  18869000 aaaattgtagtttttgtatttaggaggccaaaattgcaagtttttgaaagttaggggtggaaaagtacactttagcct 18868923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 39 - 141
Target Start/End: Original strand, 22587953 - 22588056
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagata-ggggggaaaagtgcacttta 136  Q
    ||||||||||||| ||||| ||||  |||||||| ||||| |||| |||||| ||||||||||||| ||||||||| || | |||||||| |||||||||    
T  22587953 gcaaaggggctaaatcttaaggggccaaaattgtagtttttgtacatagggg-ccaaaattgcaagtttttgaaagttatgaggggaaaaatgcacttta 22588051  T
Q  137 gcctt 141  Q
    |||||    
T  22588052 gcctt 22588056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 82 - 141
Target Start/End: Original strand, 21837298 - 21837356
Alignment:
Q  82 cttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttagcctt 141  Q
    |||||||||||||||||||||| ||||||||| || |||| |||||||||||||||||||    
T  21837298 cttagggggccaaaattgcaagtttttgaaagtta-ggggaaaaagtgcactttagcctt 21837356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 39 - 140
Target Start/End: Complemental strand, 38839344 - 38839241
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcacttta 136  Q
    |||| |||||||| ||||||||||  |||||||| ||||| ||| ||||||||| ||||||||||| ||||||||  | |||||| |||| |||||||||    
T  38839344 gcaatggggctaaatcttagggggccaaaattgtagtttttgtagttagggggctaaaattgcaagtttttgaaaattaagggggaaaaaatgcacttta 38839245  T
Q  137 gcct 140  Q
    ||||    
T  38839244 gcct 38839241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 39 - 139
Target Start/End: Complemental strand, 18299475 - 18299373
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagata-ggggggaaaagtgcacttta 136  Q
    ||||| ||||||| || |||||||  |||||||| |||||  |||||||| ||||||||||| ||| ||||||||| || ||| ||||||||||||||||    
T  18299475 gcaaaagggctaaatcatagggggccaaaattgtagtttttatacttaggtggccaaaattgaaagtttttgaaagttacgggtggaaaagtgcacttta 18299376  T
Q  137 gcc 139  Q
    |||    
T  18299375 gcc 18299373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 39 - 139
Target Start/End: Complemental strand, 41878196 - 41878092
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgca---agattttgaaagataggggggaaaagtgcactt 134  Q
    |||| |||||||| ||||| ||||  |||||||| ||||  |||||||||||||||||||||||   || ||||||||| || ||||| |||||||||||    
T  41878196 gcaatggggctaaatcttaaggggccaaaattgtagtttctgtacttagggggccaaaattgcaaatagtttttgaaagttaaggggggaaagtgcactt 41878097  T
Q  135 tagcc 139  Q
    |||||    
T  41878096 tagcc 41878092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 64 - 140
Target Start/End: Original strand, 41879237 - 41879314
Alignment:
Q  64 aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcactttagcct 140  Q
    |||||||| ||||  ||||||||||||||||||||||||| ||||||||  | |||||| ||||||| ||||||||||    
T  41879237 aaaattgtagtttatgtacttagggggccaaaattgcaagtttttgaaaattaagggggaaaaagtgtactttagcct 41879314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 74 - 138
Target Start/End: Complemental strand, 1033275 - 1033212
Alignment:
Q  74 ttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttagc 138  Q
    |||||||| ||||||| ||||||||||||| |||| |||| |||||||||||||| |||||||||    
T  1033275 ttttggtatttagggg-ccaaaattgcaagtttttaaaagttaggggggaaaagtacactttagc 1033212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 47 - 138
Target Start/End: Complemental strand, 13030383 - 13030293
Alignment:
Q  47 gctaattcttaggggggaaaa-ttgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttagc 138  Q
    ||||| |||||||||| |||| ||||  |||| ||||||||||| |||||||| |||| ||||||||| || |||||||||||||||||||||    
T  13030383 gctaaatcttagggggcaaaaattgtaatttttgtacttagggg-ccaaaattacaagtttttgaaagtta-gggggaaaagtgcactttagc 13030293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 64 - 147
Target Start/End: Complemental strand, 32739699 - 32739615
Alignment:
Q  64 aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatagggg-ggaaaagtgcactttagcctttatttt 147  Q
    |||||||| ||||| |||| || ||||||||||||||||| ||||||||| ||||||   |||| | ||||||||||||||||||    
T  32739699 aaaattgtagtttttgtacataaggggccaaaattgcaagtttttgaaagttaggggaaaaaaaatacactttagcctttatttt 32739615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 39 - 136
Target Start/End: Complemental strand, 7898793 - 7898694
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcacttta 136  Q
    |||| |||||||| ||||||||||  |||||||| ||||   |||||||| ||| ||||||||||| ||||||||| | ||||| |||||||||||||||    
T  7898793 gcaatggggctaaatcttagggggccaaaattgtagtttctatacttaggaggcaaaaattgcaagtttttgaaagttaaggggagaaaagtgcacttta 7898694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 39 - 141
Target Start/End: Complemental strand, 13568072 - 13567970
Alignment:
Q  39 gcaaaggggctaattcttaggggggaaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatag-gggggaaaagtgcactttag 137  Q
    ||||||||||||||| || |||   |||||||| ||||| ||| ||||||||||||||||||||| ||||||||  |||  |||||||||| |||||||     
T  13568072 gcaaaggggctaattttt-gggatcaaaattgtagtttttgtatttagggggccaaaattgcaagtttttgaaacttagaaggggaaaagtacactttaa 13567974  T
Q  138 cctt 141  Q
    ||||    
T  13567973 cctt 13567970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 64 - 141
Target Start/End: Complemental strand, 24475300 - 24475223
Alignment:
Q  64 aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttagcctt 141  Q
    |||||||| |||||  |||||||||||| |||||| |||| ||||||||| |||||| |  ||| |||||||||||||    
T  24475300 aaaattgtagtttttatacttagggggcaaaaattacaagtttttgaaagttaggggagggaagcgcactttagcctt 24475223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 84 - 140
Target Start/End: Complemental strand, 30714331 - 30714274
Alignment:
Q  84 tagggggccaaaattgcaagattttgaaagataggggg-gaaaagtgcactttagcct 140  Q
    |||||||||||||| |||| ||||| ||| |||||||| |||||||||||||||||||    
T  30714331 tagggggccaaaatcgcaacattttaaaacatagggggcgaaaagtgcactttagcct 30714274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 84 - 139
Target Start/End: Original strand, 9787805 - 9787861
Alignment:
Q  84 tagggggccaaaattgcaagattttgaaagataggggg-gaaaagtgcactttagcc 139  Q
    ||||||||||||||||||| ||||||||| |||||||| |||||||| | |||||||    
T  9787805 tagggggccaaaattgcaatattttgaaacatagggggcgaaaagtgtagtttagcc 9787861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 64 - 139
Target Start/End: Original strand, 24476869 - 24476943
Alignment:
Q  64 aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttagcc 139  Q
    |||||||| ||||| ||||||||||| |||||||| |||| |||| |||| | ||||| ||||||||||| |||||    
T  24476869 aaaattgtagtttttgtacttaggggaccaaaattacaagtttttaaaag-ttgggggaaaaagtgcactctagcc 24476943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 84 - 145
Target Start/End: Original strand, 2986934 - 2986996
Alignment:
Q  84 tagggggccaaaattgcaagattttgaaagatag-gggggaaaagtgcactttagcctttatt 145  Q
    |||||||||||||| |||| ||||||||| |||| | | ||||||||||||||||||| ||||    
T  2986934 tagggggccaaaatcgcaacattttgaaacatagagagtgaaaagtgcactttagcctatatt 2986996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 810806 - 810854
Alignment:
Q  64 aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaa 112  Q
    |||||||| ||||| ||||  ||||||||||||||||||| ||||||||    
T  810806 aaaattgtagtttttgtacacagggggccaaaattgcaagtttttgaaa 810854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 110 - 150
Target Start/End: Original strand, 20347489 - 20347529
Alignment:
Q  110 aaagataggggggaaaagtgcactttagcctttattttatt 150  Q
    |||||||||||||||||||||| || |||||||||| ||||    
T  20347489 aaagataggggggaaaagtgcaattaagcctttattatatt 20347529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 87 - 139
Target Start/End: Complemental strand, 21837121 - 21837070
Alignment:
Q  87 ggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttagcc 139  Q
    ||||||||||||||||| ||||||||| || | || |||||||||||||||||    
T  21837121 ggggccaaaattgcaagtttttgaaagtta-gaggaaaaagtgcactttagcc 21837070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 84 - 139
Target Start/End: Original strand, 38716440 - 38716496
Alignment:
Q  84 tagggggccaaaattgcaagattttgaaagatagg-ggggaaaagtgcactttagcc 139  Q
    ||||||| ||||||||||| ||||||||| ||||| || |||||||||| |||||||    
T  38716440 tagggggtcaaaattgcaacattttgaaacataggaggtgaaaagtgcagtttagcc 38716496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 39 - 140
Target Start/End: Complemental strand, 17572 - 17469
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcacttta 136  Q
    ||||||||| |||||||| |||||  |||||||| ||||| ||||||||||||||||||||||||| |||| |||| | |||||| ||||||||||||||    
T  17572 gcaaaggggataattcttggggggccaaaattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagttaagggggaaaaagtgcacttta 17473  T
Q  137 gcct 140  Q
    ||||    
T  17472 gcct 17469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 64 - 139
Target Start/End: Original strand, 18801 - 18877
Alignment:
Q  64 aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatagg-ggggaaaagtgcactttagcc 139  Q
    |||||| | ||||| |||| |||||| ||||||||||||  |||| |||| |||| ||| |||||||||||||||||    
T  18801 aaaattatagtttttgtacctaggggaccaaaattgcaaatttttaaaagttaggagggaaaaagtgcactttagcc 18877  T

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Target: scaffold0294 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 44 - 140
Target Start/End: Original strand, 5442 - 5540
Alignment:
Q  44 ggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagata-ggggggaaaagtgcactttagcct 140  Q
    |||||||| ||||| ||||| |||||||| ||||| ||||||| |||| |||||||||||| ||||||||  || ||||||||||||||||||||||||    
T  5442 ggggctaaatcttaagggggcaaaattgtagtttttgtacttaaggggtcaaaattgcaagtttttgaaaattagggggggaaaagtgcactttagcct 5540  T

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Target: scaffold0294; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 44 - 140
Target Start/End: Complemental strand, 4539 - 4441
Alignment:
Q  44 ggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaa-gtgcactttagcct 140  Q
    |||||||| | ||||||||| ||||||||  |||| ||||||| ||||| ||||||| ||| ||||||||  |||||||||||| ||||||||||||||    
T  4539 ggggctaaattttaggggggtaaaattgtaatttttgtacttaaggggctaaaattgtaagtttttgaaaattaggggggaaaatgtgcactttagcct 4441  T

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Target: scaffold0186 (Bit Score: 46; Significance: 5e-17; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 39 - 139
Target Start/End: Complemental strand, 23181 - 23081
Alignment:
Q  39 gcaaaggggctaattcttaggggggaaa-attgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttag 137  Q
    |||| ||||||||  |||||||| | || ||||| |||||||||||||| ||| |||||||||||| ||||||||| || ||||||||||||||||||||    
T  23181 gcaatggggctaaagcttaggggagcaagattgttgttttggtacttagagggacaaaattgcaagtttttgaaagtta-gggggaaaagtgcactttag 23083  T
Q  138 cc 139  Q
    ||    
T  23082 cc 23081  T

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Target: scaffold0186; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 56 - 140
Target Start/End: Original strand, 23907 - 23992
Alignment:
Q  56 taggggggaaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggg-gggaaaagtgcactttagcct 140  Q
    ||||||| ||| |||| |||||| || |||||| |||||||||||||| ||||||||| ||||| |  ||||||||||||||||||    
T  23907 tagggggaaaagttgttgttttgatatttagggagccaaaattgcaagtttttgaaagttagggagaaaaaagtgcactttagcct 23992  T

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Target: scaffold0320 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 39 - 140
Target Start/End: Complemental strand, 19590 - 19487
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcacttta 136  Q
    ||||||||| ||| |||||||||   |||||||| |||||  |||||||||||||||||||||||| ||||||||  | ||||||||||| |||||||||    
T  19590 gcaaaggggttaaatcttaggggatcaaaattgtagtttttatacttagggggccaaaattgcaaggttttgaaaattaaggggggaaaaatgcacttta 19491  T
Q  137 gcct 140  Q
    ||||    
T  19490 gcct 19487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2034 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold2034
Description:

Target: scaffold2034; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 39 - 139
Target Start/End: Complemental strand, 335 - 233
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcacttta 136  Q
    |||||||||||||||||||||||   |||||| | ||||| |||| |||||| ||||||||||||  ||||||||| | ||||||| |||||||||||||    
T  335 gcaaaggggctaattcttaggggaccaaaattatagtttttgtacataggggaccaaaattgcaactttttgaaagttaagggggggaaagtgcacttta 236  T
Q  137 gcc 139  Q
    |||    
T  235 gcc 233  T

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Target: scaffold0632 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 39 - 140
Target Start/End: Original strand, 3307 - 3409
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttag 137  Q
    ||||||||||||| |||||||||   |||||| | ||||| |||| || |||| |||||||| ||| |||||||||  ||||||||||||||||||||||    
T  3307 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacctatggggtcaaaattgtaagtttttgaaagtaaggggggaaaagtgcactttag 3406  T
Q  138 cct 140  Q
    |||    
T  3407 cct 3409  T

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Target: scaffold0019 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 39 - 139
Target Start/End: Complemental strand, 60192 - 60090
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatag-gggggaaaagtgcacttta 136  Q
    ||||||||||||| || |||||||  |||||||| |||||  ||| ||||||| |||||||||||| |||| |||| ||| || ||||||||||||||||    
T  60192 gcaaaggggctaaatcatagggggtcaaaattgtagtttttatacatagggggtcaaaattgcaagtttttaaaagttagaggaggaaaagtgcacttta 60093  T
Q  137 gcc 139  Q
    |||    
T  60092 gcc 60090  T

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Target: scaffold0019; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 39 - 147
Target Start/End: Original strand, 61458 - 61568
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcacttta 136  Q
    ||||| ||||||| || |||||||  |||||| | ||||| ||||||||||||| ||||||||||| ||||||||  | |||| ||||||||||||||||    
T  61458 gcaaaagggctaaatcatagggggccaaaattatagtttttgtacttagggggctaaaattgcaagtttttgaaaattaagggaggaaaagtgcacttta 61557  T
Q  137 gcctttatttt 147  Q
    || ||| ||||    
T  61558 gcttttttttt 61568  T

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Target: scaffold0112 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 44 - 139
Target Start/End: Complemental strand, 37244 - 37148
Alignment:
Q  44 ggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgc-aagattttgaaagataggggggaaaagtgcactttagcc 139  Q
    |||||||| || |||||||  |||||||| ||||| |||||||||||| ||||||||| ||  |||| ||||||| ||||||||||||||||||||||    
T  37244 ggggctaaatcgtagggggccaaaattgttgtttttgtacttagggggtcaaaattgcaaattttttaaaagata-gggggaaaagtgcactttagcc 37148  T

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Target: scaffold0049 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 39 - 150
Target Start/End: Original strand, 7414 - 7527
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatag-gggggaaaagtgcacttta 136  Q
    ||||||||||||| ||||||||||  |||||||| ||||  |||| ||||||| |||||| | ||  |||| |||  ||| |||||| ||||||||||||    
T  7414 gcaaaggggctaaatcttagggggtcaaaattgtagtttctgtacatagggggtcaaaatcgtaactttttcaaacttagagggggacaagtgcacttta 7513  T
Q  137 gcctttattttatt 150  Q
    ||||||||||||||    
T  7514 gcctttattttatt 7527  T

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Target: scaffold0419 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 84 - 139
Target Start/End: Complemental strand, 3017 - 2961
Alignment:
Q  84 tagggggccaaaattgcaagattttgaaagataggggg-gaaaagtgcactttagcc 139  Q
    |||||||||||||| |||| ||||||||| |||||||| ||||||||||||||||||    
T  3017 tagggggccaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagcc 2961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 64 - 139
Target Start/End: Original strand, 144 - 220
Alignment:
Q  64 aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagata-ggggggaaaagtgcactttagcc 139  Q
    ||||||||||||||  ||| | |||||||||||| ||||  ||||||||| || |||||||||||||||||||||||    
T  144 aaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcc 220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1303 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold1303
Description:

Target: scaffold1303; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 39 - 140
Target Start/End: Complemental strand, 1541 - 1438
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatag-gggggaaaagtgcacttta 136  Q
    ||||| ||||||| ||||||||||  |||||| | |||||  ||| ||||||| |||||||||||| |||| |||| ||| ||||||||||| |||||||    
T  1541 gcaaatgggctaaatcttagggggtcaaaattatagtttttatacatagggggtcaaaattgcaagttttttaaagttagagggggaaaagtacacttta 1442  T
Q  137 gcct 140  Q
    ||||    
T  1441 gcct 1438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 64 - 151
Target Start/End: Complemental strand, 13267 - 13181
Alignment:
Q  64 aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttagcctttattttattt 151  Q
    |||||||| ||||| |||| |||| || ||||||  |||  |||| |||| ||||||| |||||||||||||||||||||||||||||    
T  13267 aaaattgtagttttcgtacataggaggtcaaaatcacaactttttcaaagttaggggg-aaaagtgcactttagcctttattttattt 13181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 64 - 138
Target Start/End: Original strand, 2490 - 2564
Alignment:
Q  64 aaaattgtggttttggtacttagggggccaaaattgcaag-attttgaaagataggggggaaaagtgcactttagc 138  Q
    ||||| || ||||| |||||||||||| ||||||||||||  ||||||||| || |||||||||||||||||||||    
T  2490 aaaatggttgtttttgtacttagggggtcaaaattgcaagttttttgaaagtta-gggggaaaagtgcactttagc 2564  T

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Target: scaffold0093; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 64 - 138
Target Start/End: Original strand, 7113 - 7187
Alignment:
Q  64 aaaattgtggttttggtacttagggggccaaaattgcaag-attttgaaagataggggggaaaagtgcactttagc 138  Q
    ||||| || ||||| |||||||||||| ||||||||||||  ||||||||| || |||||||||||||||||||||    
T  7113 aaaatggttgtttttgtacttagggggtcaaaattgcaagttttttgaaagtta-gggggaaaagtgcactttagc 7187  T

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Target: scaffold0607 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 84 - 141
Target Start/End: Complemental strand, 2104 - 2046
Alignment:
Q  84 tagggggccaaaattgcaagattttgaaagataggggg-gaaaagtgcactttagcctt 141  Q
    ||||||||||||||||||| ||||| ||| |||||||| |||||||||| |||||||||    
T  2104 tagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgcagtttagcctt 2046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 64 - 138
Target Start/End: Original strand, 4755 - 4829
Alignment:
Q  64 aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttagc 138  Q
    |||||||| ||||  ||| ||||||||||||||||||| | |||| |||| ||||| || |||||||||||||||    
T  4755 aaaattgtagtttctgtatttagggggccaaaattgcatgtttttaaaagttagggagggaaagtgcactttagc 4829  T

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Target: scaffold0059; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 80 - 120
Target Start/End: Complemental strand, 3735 - 3695
Alignment:
Q  80 tacttagggggccaaaattgcaagattttgaaagatagggg 120  Q
    |||| ||||||||||||||||||| ||||||||| ||||||    
T  3735 tactcagggggccaaaattgcaagtttttgaaagttagggg 3695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 139
Target Start/End: Original strand, 49109 - 49185
Alignment:
Q  64 aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcactttagcc 139  Q
    |||||||| |||||  |||||||| ||||||||||||||| |||| |||| | |||| ||||||||||| |||||||    
T  49109 aaaattgtagttttaatacttaggaggccaaaattgcaagtttttaaaagttaagggtggaaaagtgcaatttagcc 49185  T

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Target: scaffold0025 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 87 - 142
Target Start/End: Original strand, 62069 - 62125
Alignment:
Q  87 ggggccaaaattgcaagattttgaaagataggggg-gaaaagtgcactttagccttt 142  Q
    |||||||||||||||| ||||||||| |||||||| ||||| |||| ||||||||||    
T  62069 ggggccaaaattgcaacattttgaaacatagggggtgaaaaatgcagtttagccttt 62125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 141
Target Start/End: Original strand, 66424 - 66479
Alignment:
Q  87 ggggccaaaattgcaagattttgaaagataggggg-gaaaagtgcactttagcctt 141  Q
    |||||||||||| ||| ||||||||| |||||||| |||||||||| |||||||||    
T  66424 ggggccaaaattacaacattttgaaacatagggggcgaaaagtgcagtttagcctt 66479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 39 - 140
Target Start/End: Original strand, 49432 - 49535
Alignment:
Q  39 gcaaaggggctaattcttagggggg-aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggg-gaaaagtgcacttta 136  Q
    ||||||| ||||| ||||||||||  |||||||| |||||  |   |||||||||||||||||||  |||| |||| || |||| |||||||||||||||    
T  49432 gcaaaggagctaaatcttagggggtcaaaattgtagtttttatttatagggggccaaaattgcaacttttttaaagttaaggggagaaaagtgcacttta 49531  T
Q  137 gcct 140  Q
    ||||    
T  49532 gcct 49535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 140
Target Start/End: Complemental strand, 5706 - 5649
Alignment:
Q  84 tagggggccaaaattgcaagattttgaaagataggggg-gaaaagtgcactttagcct 140  Q
    |||| ||||||||||| || ||||||||| |||||||| |||||||||| ||||||||    
T  5706 taggaggccaaaattgtaacattttgaaacatagggggcgaaaagtgcagtttagcct 5649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 148
Target Start/End: Complemental strand, 43880 - 43815
Alignment:
Q  84 tagggggccaaaattgcaagattttgaaagatagg-ggggaaaagtgcactttagcctttatttta 148  Q
    |||||||||||||||| || |||||||||  |||| || |||||||||| |||| |||||||||||    
T  43880 tagggggccaaaattgaaacattttgaaacttaggaggcgaaaagtgcagtttaacctttatttta 43815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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