View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17743_low_54 (Length: 213)
Name: NF17743_low_54
Description: NF17743
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17743_low_54 |
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Alignment Details
Target: chr3 (Bit Score: 146; Significance: 4e-77; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 67 - 212
Target Start/End: Original strand, 49927789 - 49927934
Alignment:
| Q |
67 |
ttgaagttgcgtccttacgataaacggctcctcgcaaaacaagcacttgtagcagtcatcaaagacattccattcgaaacaacctctcctccttccaatc |
166 |
Q |
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| T |
49927789 |
ttgaagttgcgtccttacgataaacggctcctcgcaaaacaagcacttgtagcagtcatcaaagacattccattcgaaacaacctctcctccttccaatc |
49927888 |
T |
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| Q |
167 |
tcatttggactcccgacgccgtcatcgaactcctccgtttcatctc |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
49927889 |
tcatttggactcccgacgccgtcatcgaactcctccgtttcatctc |
49927934 |
T |
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