View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17744_high_6 (Length: 263)
Name: NF17744_high_6
Description: NF17744
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17744_high_6 |
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Alignment Details
Target: chr1 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 13 - 248
Target Start/End: Original strand, 6010038 - 6010273
Alignment:
| Q |
13 |
catcaccaaccatcctctgacaatcagactttaacaaagcgaaatcctctcctttcttactttgtccagcttgaccatgaacaatctcaggcttctcaat |
112 |
Q |
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| T |
6010038 |
catcaccaaccatcctctgacaatcagactttaacaacgcgaaatcctctcctttcttactctgtccagcttgaccatgaacaatctcaggcttctcaat |
6010137 |
T |
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| Q |
113 |
tttctcgctcatcaactcccgcttcaatagaaccgaaagaggaaccgtatgatggtgttcactcctcacagacattgttctttcccctcctaatatatcc |
212 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
6010138 |
tttctcgctcatcaactcccgcttcaatagaaccgaaagaggaacggtatgatggtgttcactcctcacagacattgttctttcccctcgtaatatatcc |
6010237 |
T |
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| Q |
213 |
tcaaattctcaataccaacaattagactcaactttt |
248 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
6010238 |
tcaaattctcaataccaacaattagactcaactttt |
6010273 |
T |
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