View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17744_low_5 (Length: 347)

Name: NF17744_low_5
Description: NF17744
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17744_low_5
NF17744_low_5
[»] chr6 (23 HSPs)
chr6 (17-180)||(9953036-9953199)
chr6 (17-176)||(23388989-23389149)
chr6 (17-176)||(23379650-23379810)
chr6 (17-180)||(5739026-5739190)
chr6 (20-179)||(2371414-2371573)
chr6 (71-146)||(13004434-13004509)
chr6 (99-180)||(28666095-28666176)
chr6 (89-180)||(10289186-10289277)
chr6 (17-132)||(34501462-34501577)
chr6 (71-180)||(31071494-31071603)
chr6 (67-134)||(6512442-6512509)
chr6 (110-165)||(20181288-20181343)
chr6 (110-165)||(22154648-22154703)
chr6 (71-134)||(28112641-28112704)
chr6 (143-180)||(12981151-12981188)
chr6 (82-130)||(12991556-12991604)
chr6 (141-180)||(9314765-9314804)
chr6 (141-180)||(21633551-21633590)
chr6 (141-180)||(22463515-22463554)
chr6 (141-180)||(28116940-28116979)
chr6 (141-178)||(9840320-9840357)
chr6 (140-180)||(2378435-2378475)
chr6 (140-180)||(15543215-15543255)
[»] chr8 (23 HSPs)
chr8 (17-180)||(45156755-45156918)
chr8 (17-180)||(14420864-14421027)
chr8 (17-180)||(5540832-5540995)
chr8 (31-180)||(33878089-33878238)
chr8 (22-180)||(18722151-18722310)
chr8 (27-180)||(10663011-10663164)
chr8 (17-176)||(25592336-25592496)
chr8 (17-180)||(43682634-43682798)
chr8 (17-145)||(25228049-25228175)
chr8 (17-176)||(25595521-25595681)
chr8 (71-180)||(18826725-18826834)
chr8 (89-180)||(12582218-12582309)
chr8 (245-340)||(15662654-15662749)
chr8 (71-180)||(22174782-22174891)
chr8 (89-180)||(30640505-30640598)
chr8 (71-180)||(14589707-14589816)
chr8 (89-180)||(19792926-19793019)
chr8 (104-180)||(23612569-23612645)
chr8 (110-180)||(5981150-5981220)
chr8 (67-134)||(38249245-38249312)
chr8 (141-180)||(20261647-20261686)
chr8 (141-180)||(21048277-21048316)
chr8 (140-180)||(16952998-16953038)
[»] chr7 (23 HSPs)
chr7 (17-180)||(8276012-8276175)
chr7 (17-180)||(10431386-10431549)
chr7 (17-180)||(4542074-4542237)
chr7 (17-180)||(26556510-26556673)
chr7 (17-180)||(2442114-2442277)
chr7 (89-180)||(45288047-45288138)
chr7 (89-180)||(45291383-45291474)
chr7 (70-180)||(20081530-20081640)
chr7 (82-180)||(17729973-17730071)
chr7 (89-180)||(9865551-9865642)
chr7 (89-180)||(9080376-9080467)
chr7 (89-180)||(10344616-10344707)
chr7 (89-180)||(4596833-4596924)
chr7 (89-180)||(4694723-4694814)
chr7 (71-180)||(16164889-16164998)
chr7 (71-180)||(48644616-48644725)
chr7 (27-149)||(9273882-9274003)
chr7 (71-180)||(6602621-6602730)
chr7 (111-180)||(48645852-48645921)
chr7 (140-180)||(37167030-37167070)
chr7 (142-180)||(11826392-11826430)
chr7 (99-129)||(18563366-18563396)
chr7 (151-180)||(13450736-13450765)
[»] chr1 (22 HSPs)
chr1 (17-180)||(29644145-29644308)
chr1 (17-180)||(2793299-2793462)
chr1 (17-180)||(1951182-1951345)
chr1 (27-180)||(49499415-49499568)
chr1 (82-180)||(41059135-41059234)
chr1 (93-180)||(2404722-2404809)
chr1 (71-180)||(45961598-45961707)
chr1 (71-179)||(27537104-27537212)
chr1 (99-180)||(21019287-21019367)
chr1 (17-134)||(34733100-34733217)
chr1 (89-180)||(42021721-42021812)
chr1 (89-180)||(21108302-21108393)
chr1 (71-180)||(31204014-31204123)
chr1 (71-134)||(6071791-6071854)
chr1 (141-180)||(47708778-47708817)
chr1 (143-180)||(22460406-22460443)
chr1 (140-180)||(45940621-45940661)
chr1 (141-180)||(3088696-3088735)
chr1 (151-180)||(22454290-22454319)
chr1 (143-180)||(49147113-49147150)
chr1 (140-180)||(28110283-28110323)
chr1 (140-180)||(37184743-37184783)
[»] chr5 (25 HSPs)
chr5 (17-180)||(43490793-43490956)
chr5 (17-180)||(22937892-22938055)
chr5 (17-180)||(32837083-32837246)
chr5 (17-180)||(37214766-37214929)
chr5 (17-180)||(28442018-28442181)
chr5 (17-180)||(42061486-42061649)
chr5 (17-180)||(31862872-31863035)
chr5 (88-180)||(28788309-28788401)
chr5 (71-180)||(14016927-14017036)
chr5 (52-180)||(14376706-14376834)
chr5 (89-180)||(21336650-21336742)
chr5 (89-180)||(21827949-21828041)
chr5 (71-180)||(17747617-17747726)
chr5 (89-178)||(39191333-39191422)
chr5 (89-180)||(40916795-40916889)
chr5 (89-180)||(18031710-18031801)
chr5 (116-180)||(7270241-7270305)
chr5 (99-158)||(2836702-2836761)
chr5 (89-175)||(4100346-4100431)
chr5 (99-180)||(30065562-30065643)
chr5 (89-146)||(2837584-2837641)
chr5 (131-180)||(25329456-25329505)
chr5 (71-134)||(7624303-7624366)
chr5 (140-180)||(41307405-41307445)
chr5 (89-129)||(33551385-33551425)
[»] chr3 (33 HSPs)
chr3 (17-180)||(35411676-35411840)
chr3 (17-180)||(16185493-16185656)
chr3 (17-180)||(538015-538178)
chr3 (17-180)||(23299390-23299553)
chr3 (17-180)||(52198305-52198468)
chr3 (19-180)||(10884018-10884179)
chr3 (17-180)||(6921890-6922053)
chr3 (17-180)||(18645578-18645741)
chr3 (89-180)||(53814971-53815062)
chr3 (82-180)||(29344674-29344773)
chr3 (55-180)||(10107489-10107614)
chr3 (70-180)||(3839790-3839903)
chr3 (89-180)||(16243166-16243257)
chr3 (89-179)||(9380012-9380102)
chr3 (90-180)||(54460367-54460457)
chr3 (90-180)||(34984668-34984758)
chr3 (71-180)||(19302255-19302364)
chr3 (93-180)||(10880776-10880863)
chr3 (89-180)||(41976321-41976412)
chr3 (89-172)||(54736759-54736842)
chr3 (99-180)||(20729395-20729477)
chr3 (88-177)||(43808881-43808970)
chr3 (82-158)||(31548573-31548649)
chr3 (76-180)||(17532565-17532669)
chr3 (78-159)||(19305445-19305526)
chr3 (27-158)||(22994439-22994570)
chr3 (52-96)||(55032789-55032833)
chr3 (144-180)||(31857055-31857091)
chr3 (140-180)||(50462415-50462455)
chr3 (141-180)||(9157508-9157547)
chr3 (142-180)||(2280741-2280779)
chr3 (142-180)||(42355298-42355336)
chr3 (140-180)||(43926124-43926164)
[»] chr4 (48 HSPs)
chr4 (17-180)||(19865480-19865643)
chr4 (28-180)||(3798644-3798796)
chr4 (17-180)||(15431164-15431327)
chr4 (17-180)||(15437778-15437941)
chr4 (17-180)||(18910604-18910767)
chr4 (17-179)||(19861124-19861286)
chr4 (30-180)||(5669628-5669778)
chr4 (30-180)||(33410812-33410962)
chr4 (17-180)||(5721808-5721971)
chr4 (64-180)||(14571026-14571142)
chr4 (31-180)||(5680469-5680618)
chr4 (17-180)||(9716951-9717114)
chr4 (17-180)||(12237354-12237517)
chr4 (245-340)||(18449136-18449231)
chr4 (89-172)||(21418987-21419070)
chr4 (30-180)||(49269735-49269885)
chr4 (89-180)||(3718336-3718427)
chr4 (89-180)||(12782106-12782197)
chr4 (31-130)||(40617663-40617762)
chr4 (89-172)||(40794200-40794283)
chr4 (71-180)||(29323979-29324088)
chr4 (52-180)||(37104113-37104241)
chr4 (71-180)||(44809795-44809904)
chr4 (17-134)||(53093767-53093884)
chr4 (92-180)||(44164001-44164090)
chr4 (99-180)||(52007350-52007431)
chr4 (89-180)||(15430674-15430766)
chr4 (89-180)||(15437288-15437380)
chr4 (89-180)||(27013229-27013321)
chr4 (99-180)||(53010377-53010458)
chr4 (89-180)||(27677874-27677966)
chr4 (89-180)||(24044966-24045057)
chr4 (74-175)||(34320738-34320839)
chr4 (72-180)||(56198029-56198137)
chr4 (89-180)||(19826701-19826793)
chr4 (89-180)||(27691933-27692025)
chr4 (99-180)||(19819950-19820032)
chr4 (71-180)||(56194722-56194831)
chr4 (99-180)||(35509201-35509280)
chr4 (71-180)||(47114776-47114885)
chr4 (75-180)||(15405793-15405898)
chr4 (71-180)||(33926121-33926230)
chr4 (71-134)||(15812973-15813036)
chr4 (89-130)||(37741471-37741512)
chr4 (140-180)||(38284375-38284415)
chr4 (152-180)||(17669447-17669475)
chr4 (140-180)||(34018659-34018699)
chr4 (140-180)||(48416408-48416448)
[»] chr2 (34 HSPs)
chr2 (17-180)||(36809272-36809435)
chr2 (17-180)||(25869835-25869998)
chr2 (17-180)||(25873203-25873366)
chr2 (17-180)||(26358672-26358835)
chr2 (18-180)||(16788389-16788550)
chr2 (17-180)||(25139877-25140040)
chr2 (17-180)||(25821754-25821922)
chr2 (17-180)||(38006123-38006286)
chr2 (89-180)||(10599951-10600042)
chr2 (52-180)||(15466170-15466298)
chr2 (27-180)||(30275538-30275691)
chr2 (71-180)||(38014636-38014745)
chr2 (89-180)||(3874482-3874573)
chr2 (71-180)||(31430529-31430638)
chr2 (105-180)||(5665830-5665905)
chr2 (99-180)||(43722904-43722985)
chr2 (92-180)||(13972725-13972813)
chr2 (99-180)||(5104953-5105032)
chr2 (89-178)||(13136764-13136853)
chr2 (71-177)||(36985626-36985732)
chr2 (99-180)||(6825974-6826055)
chr2 (52-180)||(29439597-29439723)
chr2 (71-180)||(45453051-45453160)
chr2 (71-145)||(31428340-31428414)
chr2 (71-180)||(45456300-45456409)
chr2 (140-180)||(9189532-9189572)
chr2 (140-180)||(37280556-37280596)
chr2 (140-180)||(43208769-43208809)
chr2 (142-180)||(31586785-31586823)
chr2 (152-180)||(1504290-1504318)
chr2 (152-180)||(1507492-1507520)
chr2 (140-180)||(8887842-8887882)
chr2 (140-180)||(25957323-25957363)
chr2 (140-180)||(40780658-40780698)
[»] scaffold0015 (1 HSPs)
scaffold0015 (61-180)||(197242-197361)
[»] scaffold0005 (2 HSPs)
scaffold0005 (64-180)||(246234-246350)
scaffold0005 (19-169)||(290974-291124)
[»] scaffold0757 (1 HSPs)
scaffold0757 (89-180)||(4563-4654)
[»] scaffold0035 (1 HSPs)
scaffold0035 (30-180)||(61597-61747)
[»] scaffold0270 (3 HSPs)
scaffold0270 (89-180)||(969-1060)
scaffold0270 (89-180)||(4329-4420)
scaffold0270 (89-180)||(11459-11550)
[»] scaffold0080 (1 HSPs)
scaffold0080 (17-157)||(26277-26408)
[»] scaffold0381 (1 HSPs)
scaffold0381 (89-180)||(6462-6554)
[»] scaffold0520 (1 HSPs)
scaffold0520 (90-180)||(4790-4880)
[»] scaffold0334 (1 HSPs)
scaffold0334 (56-180)||(18463-18588)
[»] scaffold0045 (1 HSPs)
scaffold0045 (74-180)||(88965-89071)
[»] scaffold1993 (1 HSPs)
scaffold1993 (89-180)||(1045-1136)
[»] scaffold1684 (1 HSPs)
scaffold1684 (75-180)||(369-474)
[»] scaffold0567 (1 HSPs)
scaffold0567 (141-180)||(7016-7055)


Alignment Details
Target: chr6 (Bit Score: 113; Significance: 4e-57; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 17 - 180
Target Start/End: Complemental strand, 9953199 - 9953036
Alignment:
Q  17 tcatcctgtactccaaatcgtgatacattttcaacaatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 116  Q
    |||| |||| ||||||||||||| || ||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  9953199 tcattctgtgctccaaatcgtgacacgttttcaacaatcgtgacatgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 9953100  T
Q  117 ttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtg-aatgactgactgtcatca 180  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||| |||||| |||||||||||    
T  9953099 ttgcttgtgaactcaaaaatatcataaaaagactctaaaaat-gtgaaatgacagactgtcatca 9953036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 17 - 176
Target Start/End: Original strand, 23388989 - 23389149
Alignment:
Q  17 tcatcctgtactccaaatcgtgatacattttcaacaatcgtgacacaattttactttcttc-aaaatcttctatttttcttggttttcttgctgcttaag 115  Q
    ||||| ||| ||||||||||||| || ||||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||  |||||| |||||    
T  23388989 tcatcatgtgctccaaatcgtgacacgttttcaacaatcgtgacacaattttgctttcttcaaaaatcttctatttttcttgttttctttgctgtttaag 23389088  T
Q  116 cttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtc 176  Q
    ||||| ||||||||| |||||||||| |||| ||||||||||| ||||||||||||||||||    
T  23389089 cttgcatgtgaactc-aaaatatcatgaaaatgacactaaaaacagtgaatgactgactgtc 23389149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 17 - 176
Target Start/End: Original strand, 23379650 - 23379810
Alignment:
Q  17 tcatcctgtactccaaatcgtgatacattttcaacaatcgtgacacaattttactttcttc-aaaatcttctatttttcttggttttcttgctgcttaag 115  Q
    ||||| ||| ||||||||||||| || ||||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||  ||| || |||||    
T  23379650 tcatcatgtgctccaaatcgtgacacgttttcaacaatcgtgacacaattttgctttcttcaaaaatcttctatttttcttgttttctttgttgtttaag 23379749  T
Q  116 cttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtc 176  Q
    ||||| ||||||||| |||||||||| |||| ||||||||||| ||||||||||||||||||    
T  23379750 cttgcatgtgaactc-aaaatatcatgaaaatgacactaaaaacagtgaatgactgactgtc 23379810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 17 - 180
Target Start/End: Original strand, 5739026 - 5739190
Alignment:
Q  17 tcatcctgtactccaaatcgtgatacattttcaacaatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 116  Q
    ||||||| | ||||||||||||| |  |||| |||||||||||||| ||||| |||||||||||||||||||||||||||| |||  |||||| |||  |    
T  5739026 tcatcctttgctccaaatcgtgacatgtttttaacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttgctttctttgctgtttagac 5739125  T
Q  117 ttgcttgtgaactcaaaaatatcat--aaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||||||||||||| || |||||||  ||||| || ||||||||||||||||||||||||||||||    
T  5739126 ttgcttgtgaactc-aacatatcatgaaaaaaaactctaaaaatagtgaatgactgactgtcatca 5739190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 20 - 179
Target Start/End: Complemental strand, 2371573 - 2371414
Alignment:
Q  20 tcctgtactccaaatcgtgatacattttcaacaatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttg 119  Q
    |||||| ||| |||||  |||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||| |||  |||||| |||| ||||    
T  2371573 tcctgtgctctaaatctcgatacattttcaacaatcgtgatacgattttgctttcttcaaaatcttctatttttcttgttttatttgctgtttaaacttg 2371474  T
Q  120 cttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatc 179  Q
    ||| ||||||| |||||||||| ||||| ||| |||||||||||||| ||| ||| |||||    
T  2371473 cttatgaactc-aaaatatcataaaaaaaacattaaaaatagtgaataactaactatcatc 2371414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 71 - 146
Target Start/End: Complemental strand, 13004509 - 13004434
Alignment:
Q  71 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaa 146  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  13004509 tttcttcaaaatcttctatttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaa 13004434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 99 - 180
Target Start/End: Original strand, 28666095 - 28666176
Alignment:
Q  99 ttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||    
T  28666095 ttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaataacgaatgactgactgtcatca 28666176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 89 - 180
Target Start/End: Complemental strand, 10289277 - 10289186
Alignment:
Q  89 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||    
T  10289277 tttttcttgcttttcttgttgcttaatcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatagcgaatgacttactgtcatca 10289186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 17 - 132
Target Start/End: Complemental strand, 34501577 - 34501462
Alignment:
Q  17 tcatcctgtactccaaatcgtgatacattttcaacaatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 116  Q
    ||||||| | ||||||||||||| || ||||||||||||||||||||||||| ||||| |||||||||||| ||||||||| |||  |||||| |||| |    
T  34501577 tcatcctatgctccaaatcgtgacacgttttcaacaatcgtgacacaattttgctttcatcaaaatcttctttttttcttgttttctttgctgtttaaac 34501478  T
Q  117 ttgcttgtgaactcaa 132  Q
    ||||||||||||||||    
T  34501477 ttgcttgtgaactcaa 34501462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 71 - 180
Target Start/End: Complemental strand, 31071603 - 31071494
Alignment:
Q  71 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgact 169  Q
    ||||||||||||||| |||||||| || ||| |||| || ||||||||||| |||||||| |||| ||||| |||| |||||||||||||  ||||||||    
T  31071603 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgctcgtgaactc-aaaacatcatgaaaatgacactaaaaataaagaatgact 31071505  T
Q  170 gactgtcatca 180  Q
    |||||||||||    
T  31071504 gactgtcatca 31071494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 67 - 134
Target Start/End: Complemental strand, 6512509 - 6512442
Alignment:
Q  67 ttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaa 134  Q
    ||||| |||||||||||||| | ||||| || ||| ||||||| ||||||||||||||||||||||||    
T  6512509 ttactctcttcaaaatcttcaacttttcatgttttccttgctgtttaagcttgcttgtgaactcaaaa 6512442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 110 - 165
Target Start/End: Complemental strand, 20181343 - 20181288
Alignment:
Q  110 cttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaat 165  Q
    ||||||||||||||||||||||||||||||| |||| ||| |||||||||| ||||    
T  20181343 cttaagcttgcttgtgaactcaaaaatatcacaaaaggactctaaaaatagcgaat 20181288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 22154648 - 22154703
Alignment:
Q  110 cttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaat 165  Q
    ||||||||||||||||||||||||||||||| |||| ||| |||||||||| ||||    
T  22154648 cttaagcttgcttgtgaactcaaaaatatcacaaaaggactctaaaaatagcgaat 22154703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 134
Target Start/End: Original strand, 28112641 - 28112704
Alignment:
Q  71 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaa 134  Q
    |||||||||||||||| | ||||| || ||| ||||||  ||||||||||||||||||||||||    
T  28112641 tttcttcaaaatcttcaacttttcatgctttccttgctttttaagcttgcttgtgaactcaaaa 28112704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 143 - 180
Target Start/End: Original strand, 12981151 - 12981188
Alignment:
Q  143 aaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  12981151 aaaagactctaaaaatagtgaatgactgactgtcatca 12981188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 130
Target Start/End: Original strand, 12991556 - 12991604
Alignment:
Q  82 tcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactc 130  Q
    ||||| |||||||||| |||||||| || ||||||||||||||||||||    
T  12991556 tcttcaatttttcttgcttttcttgttgattaagcttgcttgtgaactc 12991604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 141 - 180
Target Start/End: Original strand, 9314765 - 9314804
Alignment:
Q  141 taaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||||||| |||||||||||| |||||||||||||||||    
T  9314765 taaaaagactctaaaaatagtgtatgactgactgtcatca 9314804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 141 - 180
Target Start/End: Complemental strand, 21633590 - 21633551
Alignment:
Q  141 taaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||||||| |||||||||||| |||||||||||||||||    
T  21633590 taaaaagactctaaaaatagtgtatgactgactgtcatca 21633551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 141 - 180
Target Start/End: Complemental strand, 22463554 - 22463515
Alignment:
Q  141 taaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||||||| |||||||||||| |||||||||||||||||    
T  22463554 taaaaagactctaaaaatagtgtatgactgactgtcatca 22463515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 141 - 180
Target Start/End: Complemental strand, 28116979 - 28116940
Alignment:
Q  141 taaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||||||| |||||||||||| |||||||||||||||||    
T  28116979 taaaaagactctaaaaatagtgtatgactgactgtcatca 28116940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 178
Target Start/End: Original strand, 9840320 - 9840357
Alignment:
Q  141 taaaaagacactaaaaatagtgaatgactgactgtcat 178  Q
    ||||||||| |||||||||||||||||||| |||||||    
T  9840320 taaaaagactctaaaaatagtgaatgactggctgtcat 9840357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 180
Target Start/End: Complemental strand, 2378475 - 2378435
Alignment:
Q  140 ataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||||||||| |||||||||| ||||||| |||||||||||    
T  2378475 ataaaaagactctaaaaatagcgaatgacggactgtcatca 2378435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 180
Target Start/End: Complemental strand, 15543255 - 15543215
Alignment:
Q  140 ataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||||||||| |||||||||| ||||||| |||||||||||    
T  15543255 ataaaaagactctaaaaatagcgaatgacggactgtcatca 15543215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 112; Significance: 1e-56; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 17 - 180
Target Start/End: Original strand, 45156755 - 45156918
Alignment:
Q  17 tcatcctgtactccaaatcgtgatacattttcaacaatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 116  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||| ||| | |||||||||||||||||||||||||||| ||||||||||||| ||||    
T  45156755 tcatcctgtgctccaaatcgtgacacattttcaacaatcgtgacacgattgtgctttcttcaaaatcttctatttttcttgcttttcttgctgctaaagc 45156854  T
Q  117 ttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||||||||||||||||||||||||||||||| |||||||||  ||||||   ||||||||||    
T  45156855 ttgcttgtgaactcaaaaatatcataaaaagactctaaaaatatagaatgataaactgtcatca 45156918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 17 - 180
Target Start/End: Complemental strand, 14421027 - 14420864
Alignment:
Q  17 tcatcctgtactccaaatcgtgatacattttcaacaatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 116  Q
    |||||||||  |||||||||||| || |||||||||||||||| || ||||| |||||||||||||||| ||||||||||| |||||||| |||||||||    
T  14421027 tcatcctgtgttccaaatcgtgacacgttttcaacaatcgtgatacgattttgctttcttcaaaatcttatatttttcttgcttttcttgttgcttaagc 14420928  T
Q  117 ttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||||||||||| ||||||||||||||||||| ||||||||   ||||||  |||||||||||    
T  14420927 ttgcttgtgaactaaaaaatatcataaaaagactctaaaaatgtggaatgagagactgtcatca 14420864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 180
Target Start/End: Original strand, 5540832 - 5540995
Alignment:
Q  17 tcatcctgtactccaaatcgtgatacattttcaacaatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 116  Q
    ||||||||| || |||||||||| || ||||||||||||||||||  ||||| ||| |||||||||||||||||||||||  || |||||||||||| ||    
T  5540832 tcatcctgtgcttcaaatcgtgacacgttttcaacaatcgtgacatgattttgcttccttcaaaatcttctatttttcttacttgtcttgctgcttatgc 5540931  T
Q  117 ttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||||||||||||||||||||||||||||||| ||||||||   |||||||  ||||||||||    
T  5540932 ttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgtggaatgacaaactgtcatca 5540995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 31 - 180
Target Start/End: Original strand, 33878089 - 33878238
Alignment:
Q  31 aaatcgtgatacattttcaacaatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactc 130  Q
    |||| |||| || ||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||  |||||| |||| ||| |||||||||||    
T  33878089 aaattgtgacacgttttcaacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttgttttctttgctgtttaaactttcttgtgaactc 33878188  T
Q  131 aaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
     |||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  33878189 -aaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 33878238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 22 - 180
Target Start/End: Original strand, 18722151 - 18722310
Alignment:
Q  22 ctgtactccaaatcgtgatacattttcaacaatcgtgacacaattttactttcttc-aaaatcttctatttttcttggttttcttgctgcttaagcttgc 120  Q
    |||| ||||||||||||| || ||||||||||||||||||| ||||| |||||||| |||||||||||||||||||| |||  ||| || ||||||||||    
T  18722151 ctgtgctccaaatcgtgacacgttttcaacaatcgtgacacgattttgctttcttcaaaaatcttctatttttcttgttttctttgttgtttaagcttgc 18722250  T
Q  121 ttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
     ||||||||| |||||||||| |||| ||||||||||| ||||||||||||||||||||||    
T  18722251 atgtgaactc-aaaatatcatgaaaatgacactaaaaacagtgaatgactgactgtcatca 18722310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 27 - 180
Target Start/End: Complemental strand, 10663164 - 10663011
Alignment:
Q  27 ctccaaatcgtgatacattttcaacaatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtga 126  Q
    ||||||||| ||| |  ||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||  |||||| |||  |||||||||||    
T  10663164 ctccaaatcatgacatgttttcaacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttgctttctttgctgtttagacttgcttgtga 10663065  T
Q  127 actcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||| || ||||||| |||||||| ||||||||||||||||||||||||||||||    
T  10663064 actc-aacatatcatgaaaaagactctaaaaatagtgaatgactgactgtcatca 10663011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 17 - 176
Target Start/End: Original strand, 25592336 - 25592496
Alignment:
Q  17 tcatcctgtactccaaatcgtgatacattttcaacaatcgtgacacaattttactttcttc-aaaatcttctatttttcttggttttcttgctgcttaag 115  Q
    ||||| ||| |||||||||| || |||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||| |||  ||| || |||||    
T  25592336 tcatcatgtgctccaaatcgggacacattttcaacaatcgtgacacgattttgctttcttcaaaaatcttctatttttcttgttttctttgttgtttaag 25592435  T
Q  116 cttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtc 176  Q
    ||||| ||||||||| |||||||||| |||| ||||||||||| ||||||||||||||||||    
T  25592436 cttgcatgtgaactc-aaaatatcatgaaaatgacactaaaaacagtgaatgactgactgtc 25592496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 17 - 180
Target Start/End: Original strand, 43682634 - 43682798
Alignment:
Q  17 tcatcctgtactccaaatcgtgatacattttcaacaatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 116  Q
    |||||||||  ||||||| |||| || ||||||| ||||||||||| ||||| |||||||||||||||||||||||||||| |||  |||||| |||| |    
T  43682634 tcatcctgtgttccaaattgtgacacgttttcaataatcgtgacacgattttgctttcttcaaaatcttctatttttcttgctttctttgctgtttaaac 43682733  T
Q  117 ttgcttgtgaactcaaaaatatcat--aaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||||| ||||||| ||||||||||  |||| || ||||||||||||||||||||||||| |||||    
T  43682734 ttgcttatgaactc-aaaatatcatgaaaaatgatactaaaaatagtgaatgactgactgccatca 43682798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 17 - 145
Target Start/End: Complemental strand, 25228175 - 25228049
Alignment:
Q  17 tcatcctgtactccaaatcgtgatacattttcaacaatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 116  Q
    ||||| ||| ||||||||||||| || |||||| |||||| ||||| |||||  ||||||||||||||||||||||||||| |||||||||| ||| |||    
T  25228175 tcatcatgtgctccaaatcgtgacacgttttcagcaatcgagacacgatttt--tttcttcaaaatcttctatttttcttgtttttcttgcttcttgagc 25228078  T
Q  117 ttgcttgtgaactcaaaaatatcataaaa 145  Q
    |||||||||||||||||||||||||||||    
T  25228077 ttgcttgtgaactcaaaaatatcataaaa 25228049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 17 - 176
Target Start/End: Original strand, 25595521 - 25595681
Alignment:
Q  17 tcatcctgtactccaaatcgtgatacattttcaacaatcgtgacacaattttactttcttc-aaaatcttctatttttcttggttttcttgctgcttaag 115  Q
    ||||| ||| ||||||||||||| || ||||||||||||||||||| ||||| |||||||| |||||||||||||||||||| |||  ||| || |||||    
T  25595521 tcatcatgtgctccaaatcgtgacacgttttcaacaatcgtgacacgattttgctttcttcaaaaatcttctatttttcttgttttctttgttgtttaag 25595620  T
Q  116 cttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtc 176  Q
    ||||| ||||||||| |||||||||| |||| ||||||||||| | ||||||||||||||||    
T  25595621 cttgcatgtgaactc-aaaatatcatgaaaatgacactaaaaacaatgaatgactgactgtc 25595681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 71 - 180
Target Start/End: Original strand, 18826725 - 18826834
Alignment:
Q  71 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactg 170  Q
    ||||||||||||||| |||||||| || ||| |||| || ||||| |||||||||||||||||| |||||||||||||| ||||||||||  ||||||||    
T  18826725 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagtttgcttgtgaactcaaaattatcataaaaagactctaaaaatagcaaatgactg 18826824  T
Q  171 actgtcatca 180  Q
    ||||||||||    
T  18826825 actgtcatca 18826834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 89 - 180
Target Start/End: Complemental strand, 12582309 - 12582218
Alignment:
Q  89 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||| ||| | ||||||    
T  12582309 tttttcttgcttttctttctgcttaatcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatagcgaatgattgattttcatca 12582218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 245 - 340
Target Start/End: Original strand, 15662654 - 15662749
Alignment:
Q  245 agtcgtgtgcttggatatctttacttaatgatgttagtgctattgagatgatgttgtagttctaagaatgatgtgataatttgttgatgatgatgt 340  Q
    |||||||||||||||||| ||||||| |||||| ||||||  || |||| ||||||||||| ||||||||||||||| |||| |||||||||||||    
T  15662654 agtcgtgtgcttggatatatttacttgatgatgctagtgcactttagataatgttgtagttgtaagaatgatgtgatgatttattgatgatgatgt 15662749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 71 - 180
Target Start/End: Original strand, 22174782 - 22174891
Alignment:
Q  71 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgact 169  Q
    ||||||||||||||| |||||||| || ||| |||| || ||||||||||||||||||||||||| ||||| |||| |||||| |||||| |||||| ||    
T  22174782 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcttgtgaactcaaaaacatcatgaaaatgacact-aaaataatgaatggct 22174880  T
Q  170 gactgtcatca 180  Q
    |||||||||||    
T  22174881 gactgtcatca 22174891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 89 - 180
Target Start/End: Complemental strand, 30640598 - 30640505
Alignment:
Q  89 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcata--aaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||||||||  ||||||||||||||||||||||||||||||||||| |||||||  ||||||  || |||||||||||||| ||||||||||||    
T  30640598 tttttcttgcatttcttgctgcttaagcttgcttgtgaactcaaaagtatcataaaaaaagattcttaaaatagtgaatgattgactgtcatca 30640505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 71 - 180
Target Start/End: Original strand, 14589707 - 14589816
Alignment:
Q  71 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgact 169  Q
    ||||||||||||||| |||||||| || ||| |||| ||  ||||||||||||||||||| |||| ||||| |||| ||||||||||||| |||||||||    
T  14589707 tttcttcaaaatcttgtatttttcatgctttccttgttgtgtaagcttgcttgtgaactc-aaaacatcatgaaaatgacactaaaaataatgaatgact 14589805  T
Q  170 gactgtcatca 180  Q
     ||| ||||||    
T  14589806 aactatcatca 14589816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 89 - 180
Target Start/End: Complemental strand, 19793019 - 19792926
Alignment:
Q  89 tttttcttggttttcttgctgcttaagctt-gcttgtgaactcaaaaatatcata-aaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||||| | |||||||| || |||| ||| |||||||||||||||||||||||| ||||||| |||||||||||||||| | |||||||||||    
T  19793019 tttttctagcttttcttgttgtttaatctttgcttgtgaactcaaaaatatcataaaaaagactctaaaaatagtgaatggccgactgtcatca 19792926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 104 - 180
Target Start/End: Complemental strand, 23612645 - 23612569
Alignment:
Q  104 ttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaa-gacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||||| |||| ||||||||||||||||||| | |||| |||| ||||||||||||||||||||||||||||||||||    
T  23612645 ttgctgtttaaacttgcttgtgaactcaaaa-tctcatcaaaatgacactaaaaatagtgaatgactgactgtcatca 23612569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 110 - 180
Target Start/End: Original strand, 5981150 - 5981220
Alignment:
Q  110 cttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtg-aatgactgactgtcatca 180  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||||| ||| |||||| |||||||||||    
T  5981150 cttaaacttgcttgtgaactcaaaaatatcataaaaagactctaaaaat-gtgaaatgacggactgtcatca 5981220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 67 - 134
Target Start/End: Original strand, 38249245 - 38249312
Alignment:
Q  67 ttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaa 134  Q
    |||||||||||||||||||  | ||||| || ||| ||||||| ||||||||||||||||| ||||||    
T  38249245 ttactttcttcaaaatctttaacttttcatgttttccttgctgtttaagcttgcttgtgaattcaaaa 38249312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 141 - 180
Target Start/End: Complemental strand, 20261686 - 20261647
Alignment:
Q  141 taaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||||||| |||||||||||| |||||||||||||||||    
T  20261686 taaaaagactctaaaaatagtgtatgactgactgtcatca 20261647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 141 - 180
Target Start/End: Complemental strand, 21048316 - 21048277
Alignment:
Q  141 taaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||||||| |||||||||||| |||||||||||||||||    
T  21048316 taaaaagactctaaaaatagtgtatgactgactgtcatca 21048277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 180
Target Start/End: Complemental strand, 16953038 - 16952998
Alignment:
Q  140 ataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||||||||| |||||||||| ||||||| |||||||||||    
T  16953038 ataaaaagactctaaaaatagcgaatgacggactgtcatca 16952998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 112; Significance: 1e-56; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 17 - 180
Target Start/End: Complemental strand, 8276175 - 8276012
Alignment:
Q  17 tcatcctgtactccaaatcgtgatacattttcaacaatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 116  Q
    ||||| ||| |||||||||||||||| |||||||||||| |||||| |||||  ||||||||||||||||||||||||||| |||||||||||||| |||    
T  8276175 tcatcatgtgctccaaatcgtgatacgttttcaacaatcatgacacgattttgttttcttcaaaatcttctatttttcttgcttttcttgctgcttgagc 8276076  T
Q  117 ttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||||||||||||||||||||||||||||||| |||||||||  ||||||| |||||||||||    
T  8276075 ttgcttgtgaactcaaaaatatcataaaaagactctaaaaatatggaatgacagactgtcatca 8276012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 17 - 180
Target Start/End: Complemental strand, 10431549 - 10431386
Alignment:
Q  17 tcatcctgtactccaaatcgtgatacattttcaacaatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 116  Q
    ||||||||| ||| ||||||||| || ||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||  |||||| |||| |    
T  10431549 tcatcctgtgctctaaatcgtgacacgttttcaacaatcgtgacacaattttgctttcttcaaaatcttatatttttcttgttttctttgctgtttaaac 10431450  T
Q  117 ttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  10431449 ttgcttgtgaactc-aaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 10431386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 17 - 180
Target Start/End: Complemental strand, 4542237 - 4542074
Alignment:
Q  17 tcatcctgtactccaaatcgtgatacattttcaacaatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 116  Q
    ||||||| | ||||||||| ||| |||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||| |||  |||||| |||| |    
T  4542237 tcatcctatgctccaaatcatgacacattttcaacaatcgtgacacaaatttgctttcctcaaaatcttctatttttcttgttttctttgctgtttaaac 4542138  T
Q  117 ttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  4542137 ttgcttgtgaactc-aaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 4542074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 17 - 180
Target Start/End: Complemental strand, 26556673 - 26556510
Alignment:
Q  17 tcatcctgtactccaaatcgtgatacattttcaacaatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 116  Q
    ||||| ||| ||| ||||||||| || ||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||  ||| || ||||||    
T  26556673 tcatcatgtgctctaaatcgtgacacgttttcaacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagc 26556574  T
Q  117 ttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  26556573 ttgcttgtgaactc-aaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 26556510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 17 - 180
Target Start/End: Original strand, 2442114 - 2442277
Alignment:
Q  17 tcatcctgtactccaaatcgtgatacattttcaacaatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 116  Q
    ||||||| | || ||||||||||||| ||||||||||||||||||| | ||| ||||| ||| |||||||||||||||||| |||  |||||| |||| |    
T  2442114 tcatcctatgcttcaaatcgtgatacgttttcaacaatcgtgacacgaatttgctttcctcagaatcttctatttttcttgttttctttgctgtttaaac 2442213  T
Q  117 ttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||||||||||||| |||||||||| |||| |||||| |||||||||||||||||||||||||||    
T  2442214 ttgcttgtgaactc-aaaatatcatgaaaatgacacttaaaatagtgaatgactgactgtcatca 2442277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 89 - 180
Target Start/End: Original strand, 45288047 - 45288138
Alignment:
Q  89 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  45288047 tttttcttgtttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatagtgaatgactgactgtcatca 45288138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 89 - 180
Target Start/End: Original strand, 45291383 - 45291474
Alignment:
Q  89 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  45291383 tttttcttgtttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatagtgaatgactgactgtcatca 45291474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 70 - 180
Target Start/End: Original strand, 20081530 - 20081640
Alignment:
Q  70 ctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgact 169  Q
    ||||||||||  ||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  20081530 ctttcttcaatttctttgatttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaacactctaaaaatagtgaatgact 20081629  T
Q  170 gactgtcatca 180  Q
    |||||||||||    
T  20081630 gactgtcatca 20081640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 82 - 180
Target Start/End: Complemental strand, 17730071 - 17729973
Alignment:
Q  82 tcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||    
T  17730071 tcttcgatttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaggactctaaaaatagtgaaagactgactgtcatca 17729973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 89 - 180
Target Start/End: Original strand, 9865551 - 9865642
Alignment:
Q  89 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  9865551 tttttcttgcttttcttgctgcttaatcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatagcgaatgactgactgtcatca 9865642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 89 - 180
Target Start/End: Complemental strand, 9080467 - 9080376
Alignment:
Q  89 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||  |||||||| ||||||||||    
T  9080467 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaattacataaaaagactctaaaaataacgaatgactaactgtcatca 9080376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 89 - 180
Target Start/End: Complemental strand, 10344707 - 10344616
Alignment:
Q  89 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||| |||| |||||| |||||||    
T  10344707 ttttttttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatttcataagaagactctaaaaatagcgaattactgacagtcatca 10344616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 89 - 180
Target Start/End: Original strand, 4596833 - 4596924
Alignment:
Q  89 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||||||| |||||||| ||||||| ||| ||||||| |||||||||||||||||||||| |||||||||  |||||| ||||||||||||    
T  4596833 tttttcttgcttttcttgttgcttaatctttcttgtgagctcaaaaatatcataaaaagactctaaaaataacgaatgattgactgtcatca 4596924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 89 - 180
Target Start/End: Complemental strand, 4694814 - 4694723
Alignment:
Q  89 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||||||  |||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||   ||||||||||| ||||||    
T  4694814 tttttcttacttttcttgctgcttaatcttgcttgtgaactcaaaaatatcatagaaagactctaaaaataacaaatgactgactttcatca 4694723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 71 - 180
Target Start/End: Complemental strand, 16164998 - 16164889
Alignment:
Q  71 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgact 169  Q
    ||||||||||||||| |||||||| || ||| |||| || |||||||||||||||||||| |||| ||||| ||||  ||||||||||||  ||||||||    
T  16164998 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcttgtgaactc-aaaacatcatgaaaattacactaaaaataacgaatgact 16164900  T
Q  170 gactgtcatca 180  Q
    |||||||||||    
T  16164899 gactgtcatca 16164889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 71 - 180
Target Start/End: Complemental strand, 48644725 - 48644616
Alignment:
Q  71 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgact 169  Q
    ||||||||||||||| |||||||| || ||| |||| || |||||||||||||||||||| |||| || || |||| |||||||||||||  ||||||||    
T  48644725 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcttgtgaactc-aaaacattatgaaaatgacactaaaaataaagaatgact 48644627  T
Q  170 gactgtcatca 180  Q
    |||||||||||    
T  48644626 gactgtcatca 48644616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 27 - 149
Target Start/End: Original strand, 9273882 - 9274003
Alignment:
Q  27 ctccaaatcgtgatacattttcaacaatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtga 126  Q
    ||||||||||||| || ||||||  ||||||||||  |||   |||||||||   ||||| | |||||||  |||||||| |||||||||||||||||||    
T  9273882 ctccaaatcgtgacacgttttcagtaatcgtgacatgattcc-ctttcttcagtttcttcaacttttctttcttttcttggtgcttaagcttgcttgtga 9273980  T
Q  127 actcaaaaatatcataaaaagac 149  Q
    |||| ||||||||||||||||||    
T  9273981 actccaaaatatcataaaaagac 9274003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 71 - 180
Target Start/End: Complemental strand, 6602730 - 6602621
Alignment:
Q  71 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgact 169  Q
    ||||||||||||||| |||||||| |  ||| |||| || |||||||||||||||||||  |||| || || || | |||||||||||||  ||||||||    
T  6602730 tttcttcaaaatcttgtatttttcatactttccttgttgtttaagcttgcttgtgaact-taaaacattatgaacatgacactaaaaataacgaatgact 6602632  T
Q  170 gactgtcatca 180  Q
    |||||||||||    
T  6602631 gactgtcatca 6602621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 111 - 180
Target Start/End: Original strand, 48645852 - 48645921
Alignment:
Q  111 ttaagcttgcttgtgaactcaaaaatatcataaaaa-gacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||||||||||||||||||||||  ||||| |||| |||||||||||||  |||||||||||||||||||    
T  48645852 ttaagcttgcttgtgaactcaaaac-atcatgaaaatgacactaaaaataaagaatgactgactgtcatca 48645921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 37167030 - 37167070
Alignment:
Q  140 ataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||||||||| |||||||||| |||||||||||||||||||    
T  37167030 ataaaaagactctaaaaatagcgaatgactgactgtcatca 37167070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 180
Target Start/End: Original strand, 11826392 - 11826430
Alignment:
Q  142 aaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||||||| |||||||||||| |||||||||||||||||    
T  11826392 aaaaagactctaaaaatagtgcatgactgactgtcatca 11826430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 129
Target Start/End: Original strand, 18563366 - 18563396
Alignment:
Q  99 ttttcttgctgcttaagcttgcttgtgaact 129  Q
    |||||||||||||||||||||||||||||||    
T  18563366 ttttcttgctgcttaagcttgcttgtgaact 18563396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 180
Target Start/End: Original strand, 13450736 - 13450765
Alignment:
Q  151 ctaaaaatagtgaatgactgactgtcatca 180  Q
    ||||||||||||||||||||||||||||||    
T  13450736 ctaaaaatagtgaatgactgactgtcatca 13450765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 112; Significance: 1e-56; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 17 - 180
Target Start/End: Original strand, 29644145 - 29644308
Alignment:
Q  17 tcatcctgtactccaaatcgtgatacattttcaacaatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 116  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||| ||||||||||||     
T  29644145 tcatcctgtgctccaaatcgtgatacgttttcaacaatcgtgacacgattttactttcttcaaagtcttctatttttcttgctttttttgctgcttaagt 29644244  T
Q  117 ttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||||||||||||||||||||||||||||||| ||| ||||   ||||||| |||||||||||    
T  29644245 ttgcttgtgaactcaaaaatatcataaaaagactctataaatgtggaatgacagactgtcatca 29644308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 17 - 180
Target Start/End: Complemental strand, 2793462 - 2793299
Alignment:
Q  17 tcatcctgtactccaaatcgtgatacattttcaacaatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 116  Q
    ||||||||| || |||||||||| || ||||||||||||||||||| ||||| |||||||| ||||||||||||||||||| |||  || ||| |||| |    
T  2793462 tcatcctgtgcttcaaatcgtgacacgttttcaacaatcgtgacacgattttgctttcttcgaaatcttctatttttcttgttttctttactgtttaaac 2793363  T
Q  117 ttgcttgtgaactcaaaaatatca-taaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||||||||||||| ||||||||| ||||||||| |||||||||||||| |||||||||||||||    
T  2793362 ttgcttgtgaactc-aaaatatcattaaaaagactctaaaaatagtgaacgactgactgtcatca 2793299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 17 - 180
Target Start/End: Original strand, 1951182 - 1951345
Alignment:
Q  17 tcatcctgtactccaaatcgtgatacattttcaacaatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 116  Q
    ||||||| | ||||||||||||| || ||||||||||||||||||| ||||| |||||||  ||||||||||||||||||| |||  |||||| |||| |    
T  1951182 tcatcctatgctccaaatcgtgacacgttttcaacaatcgtgacacgattttgctttctttgaaatcttctatttttcttgttttctttgctgtttaaac 1951281  T
Q  117 ttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||||||||||||| || ||||||| |||| || ||| |||||||||||||||||||||||||||    
T  1951282 ttgcttgtgaactc-aagatatcatgaaaatgatacttaaaatagtgaatgactgactgtcatca 1951345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 27 - 180
Target Start/End: Original strand, 49499415 - 49499568
Alignment:
Q  27 ctccaaatcgtgatacattttcaacaatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtga 126  Q
    ||||||||||||| || ||||||||||||||||||  ||||| |||||||||||||||||||||||||||| |||  ||| || |||||||||| |||||    
T  49499415 ctccaaatcgtgacacgttttcaacaatcgtgacatgattttgctttcttcaaaatcttctatttttcttgttttctttgttgtttaagcttgcatgtga 49499514  T
Q  127 actcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||| |||||||||| ||||  |||||||||| || |||||||||||||||||||    
T  49499515 actc-aaaatatcatgaaaataacactaaaaacagcgaatgactgactgtcatca 49499568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 82 - 180
Target Start/End: Original strand, 41059135 - 41059234
Alignment:
Q  82 tcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||| |||||||||||||||||||    
T  41059135 tcttcgatttttcttgcttttcttgctgcttaagcttgcttgcgaactcaaaaatatcataaaaaagactctaaaaatagcgaatgactgactgtcatca 41059234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 93 - 180
Target Start/End: Complemental strand, 2404809 - 2404722
Alignment:
Q  93 tcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||||||    
T  2404809 tcttgcttttcttgctgcttaatcttgcttgtgaactcaaaaatattataaaaagactctaaaaatagcgaatgactgactgtcatca 2404722  T

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Target: chr1; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 71 - 180
Target Start/End: Original strand, 45961598 - 45961707
Alignment:
Q  71 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactg 170  Q
    ||||||||||||||| |||||||| || ||| |||| || |||||||||||||||||||||||| |||||||| ||||| ||||||||||  ||||||||    
T  45961598 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcttgtgaactcaaaattatcataacaagactctaaaaatagcaaatgactg 45961697  T
Q  171 actgtcatca 180  Q
    ||||||||||    
T  45961698 actgtcatca 45961707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 71 - 179
Target Start/End: Original strand, 27537104 - 27537212
Alignment:
Q  71 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactg 170  Q
    ||||||||||||||| |||||||| || ||| |||| || |||||||||||||||||||||||| ||||||||||||||  |||||||||  ||||||||    
T  27537104 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcttgtgaactcaaaattatcataaaaagactataaaaatagcaaatgactg 27537203  T
Q  171 actgtcatc 179  Q
    |||||||||    
T  27537204 actgtcatc 27537212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 99 - 180
Target Start/End: Original strand, 21019287 - 21019367
Alignment:
Q  99 ttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||||||||||||||||||| ||| ||||||||||||||||| ||||||| |||||||||| |||||||||||||||||||    
T  21019287 ttttcttgctgcttaagcttggttgcgaactcaaaaatatcat-aaaagactctaaaaatagcgaatgactgactgtcatca 21019367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 134
Target Start/End: Original strand, 34733100 - 34733217
Alignment:
Q  17 tcatcctgtactccaaatcgtgatacattttcaacaatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 116  Q
    ||||||||| ||||||||| ||| |  ||||||||||||||| ||| ||||||||||||||||||||||| | ||||| || ||| ||| ||| |||| |    
T  34733100 tcatcctgtgctccaaatcctgacatgttttcaacaatcgtgtcacgattttactttcttcaaaatcttcaacttttcatgatttccttactgtttaatc 34733199  T
Q  117 ttgcttgtgaactcaaaa 134  Q
    ||||||||||||||||||    
T  34733200 ttgcttgtgaactcaaaa 34733217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 89 - 180
Target Start/End: Complemental strand, 42021812 - 42021721
Alignment:
Q  89 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||||||| |||| ||||||||||| ||||||||||||||||  ||||| |||||||||| |||||||||| |||||| ||||||||||||    
T  42021812 tttttcttgcttttattgctgcttaaacttgcttgtgaactcagtaatattataaaaagactctaaaaatagcgaatgattgactgtcatca 42021721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 89 - 180
Target Start/End: Original strand, 21108302 - 21108393
Alignment:
Q  89 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||||||| ||||||||| |||||| ||||||| |||  ||||||||||||||| ||||| ||||||| || |||||||||||||||||||    
T  21108302 tttttcttgcttttcttgcagcttaatcttgcttttgagttcaaaaatatcataagaagactctaaaaagagcgaatgactgactgtcatca 21108393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 71 - 180
Target Start/End: Complemental strand, 31204123 - 31204014
Alignment:
Q  71 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgact 169  Q
    ||||||||||||||| |||||||| || ||| |||| || |||||||||||||||||||| |||| || || |||| |||||||||||||  ||||||||    
T  31204123 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcttgtgaactc-aaaacataatgaaaatgacactaaaaataaagaatgact 31204025  T
Q  170 gactgtcatca 180  Q
    |||| ||||||    
T  31204024 gactatcatca 31204014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 71 - 134
Target Start/End: Original strand, 6071791 - 6071854
Alignment:
Q  71 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaa 134  Q
    ||||||||||||||| |||||||| || |||||||| || ||||||||||||||||||||||||    
T  6071791 tttcttcaaaatcttgtatttttcatgtttttcttgttgtttaagcttgcttgtgaactcaaaa 6071854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 141 - 180
Target Start/End: Original strand, 47708778 - 47708817
Alignment:
Q  141 taaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  47708778 taaaaagactctaaaaatagtgaatgactgactgtcatca 47708817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 143 - 180
Target Start/End: Original strand, 22460406 - 22460443
Alignment:
Q  143 aaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  22460406 aaaagactctaaaaatagtgaatgactgactgtcatca 22460443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 180
Target Start/End: Complemental strand, 45940661 - 45940621
Alignment:
Q  140 ataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||||||||| |||||||||| |||||||||||||||||||    
T  45940661 ataaaaagactctaaaaatagcgaatgactgactgtcatca 45940621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 141 - 180
Target Start/End: Original strand, 3088696 - 3088735
Alignment:
Q  141 taaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||||||| |||||||||||| |||||||||||||||||    
T  3088696 taaaaagactctaaaaatagtgcatgactgactgtcatca 3088735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 180
Target Start/End: Original strand, 22454290 - 22454319
Alignment:
Q  151 ctaaaaatagtgaatgactgactgtcatca 180  Q
    ||||||||||||||||||||||||||||||    
T  22454290 ctaaaaatagtgaatgactgactgtcatca 22454319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 180
Target Start/End: Complemental strand, 49147150 - 49147113
Alignment:
Q  143 aaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||||| ||||||||||||||||| ||||||||||||    
T  49147150 aaaagactctaaaaatagtgaatgattgactgtcatca 49147113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 180
Target Start/End: Complemental strand, 28110323 - 28110283
Alignment:
Q  140 ataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||||||||| |||||||||| ||||||| |||||||||||    
T  28110323 ataaaaagactctaaaaatagcgaatgacggactgtcatca 28110283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 37184743 - 37184783
Alignment:
Q  140 ataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||||||||| |||||||||| ||||||| |||||||||||    
T  37184743 ataaaaagactctaaaaatagcgaatgacggactgtcatca 37184783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 109; Significance: 9e-55; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 17 - 180
Target Start/End: Complemental strand, 43490956 - 43490793
Alignment:
Q  17 tcatcctgtactccaaatcgtgatacattttcaacaatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 116  Q
    ||||||||| |||| |||||||| || ||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  43490956 tcatcctgtgctcctaatcgtgacacgttttcaacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttgcttttcttgctgcttaagc 43490857  T
Q  117 ttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtg-aatgactgactgtcatca 180  Q
    ||| ||||||||||||||||||||||||||||| |||||||| ||| |||||| |||||||||||    
T  43490856 ttgtttgtgaactcaaaaatatcataaaaagactctaaaaat-gtgaaatgacagactgtcatca 43490793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 17 - 180
Target Start/End: Original strand, 22937892 - 22938055
Alignment:
Q  17 tcatcctgtactccaaatcgtgatacattttcaacaatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 116  Q
    ||||| ||| |||||||||||||||| |||||||||| |||| ||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  22937892 tcatcttgtgctccaaatcgtgatacgttttcaacaaccgtggcacgattttgctttcttcaaaatcttctatttttcttgcttttcttgctgcttaagc 22937991  T
Q  117 ttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||||||||||||||||||||||||||||||| |||||||    ||||||| |||||||||||    
T  22937992 ttgcttgtgaactcaaaaatatcataaaaagactctaaaaacgtggaatgacagactgtcatca 22938055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 17 - 180
Target Start/End: Complemental strand, 32837246 - 32837083
Alignment:
Q  17 tcatcctgtactccaaatcgtgatacattttcaacaatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 116  Q
    ||||||| | ||||||||||||| || |||||||||||| |||||| ||||| |||||||||||||||||||||||||||  ||||||||||||||||||    
T  32837246 tcatcctatgctccaaatcgtgacacgttttcaacaatcatgacacgattttgctttcttcaaaatcttctatttttctttcttttcttgctgcttaagc 32837147  T
Q  117 ttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||||||||||||||||||||||||||||||| ||||||||   |||||||  ||||||||||    
T  32837146 ttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgtggaatgacatactgtcatca 32837083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 17 - 180
Target Start/End: Complemental strand, 37214929 - 37214766
Alignment:
Q  17 tcatcctgtactccaaatcgtgatacattttcaacaatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 116  Q
    ||||||||| ||||||||||||| |  ||||||||||| |||| || ||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  37214929 tcatcctgtgctccaaatcgtgacatgttttcaacaattgtgatacgattttgctttcttcaaaatcttctatttttcttgcttttcttgctgcttaagc 37214830  T
Q  117 ttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||||||||||||||||||||||||||||||| ||||||||   ||||||| |||||| ||||    
T  37214829 ttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgtggaatgacagactgttatca 37214766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 17 - 180
Target Start/End: Original strand, 28442018 - 28442181
Alignment:
Q  17 tcatcctgtactccaaatcgtgatacattttcaacaatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 116  Q
    ||||||||| ||| ||||||||| || ||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||  |||||| |||| |    
T  28442018 tcatcctgtgctctaaatcgtgacacgttttcaacaatcgtgacacaattttgctttcttcaaaatcttatatttttcttgttttctttgctgtttaaac 28442117  T
Q  117 ttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  28442118 ttgcttgtgaactc-aaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 28442181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 17 - 180
Target Start/End: Complemental strand, 42061649 - 42061486
Alignment:
Q  17 tcatcctgtactccaaatcgtgatacattttcaacaatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 116  Q
    ||||| ||| || |||||||||| || ||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||  |||||| ||||||    
T  42061649 tcatcatgtgcttcaaatcgtgacacgttttcaacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttgttttctttgctgtttaagc 42061550  T
Q  117 ttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||||||||||||| |||||||||| |||| ||||||||||| ||||||||||||||||||||||    
T  42061549 ttgcttgtgaactc-aaaatatcatgaaaatgacactaaaaacagtgaatgactgactgtcatca 42061486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 17 - 180
Target Start/End: Complemental strand, 31863035 - 31862872
Alignment:
Q  17 tcatcctgtactccaaatcgtgatacattttcaacaatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 116  Q
    ||||| ||| ||| ||||||||| || ||||||||||||||||||| ||||| ||||||||||||| |||||||||||||| |||  ||| || ||||||    
T  31863035 tcatcatgtgctctaaatcgtgacacgttttcaacaatcgtgacacgattttgctttcttcaaaattttctatttttcttgctttctttgttgtttaagc 31862936  T
Q  117 ttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||||||||||||| ||||||| || |||| |||||||||||||  |||||||||||||||||||    
T  31862935 ttgcttgtgaactc-aaaatattatgaaaatgacactaaaaataaggaatgactgactgtcatca 31862872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 88 - 180
Target Start/End: Original strand, 28788309 - 28788401
Alignment:
Q  88 atttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||  ||||||||||||||||||    
T  28788309 atttttcttgtttttcttgctgcttaagcttgcttgtgaactaaaaaatatcataaaaagactctaaaaatagcaaatgactgactgtcatca 28788401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 71 - 180
Target Start/End: Original strand, 14016927 - 14017036
Alignment:
Q  71 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactg 170  Q
    ||||||||||||||| |||||||| || ||| |||| || |||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||    
T  14016927 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcttgtgaactcaaaattatcataaaaagactctaaaaatagcaaatgactg 14017026  T
Q  171 actgtcatca 180  Q
    ||||||||||    
T  14017027 actgtcatca 14017036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 52 - 180
Target Start/End: Original strand, 14376706 - 14376834
Alignment:
Q  52 aatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagaca 150  Q
    ||||||||||| | ||| ||||| |||||||||||||||||||||| |||  ||| || |||| ||||||||||||||| |||||||||| |||| ||||    
T  14376706 aatcgtgacacgaatttgctttcctcaaaatcttctatttttcttgatttctttgttgtttaaacttgcttgtgaactc-aaaatatcatgaaaatgaca 14376804  T
Q  151 ctaaaaatagtgaatgactgactgtcatca 180  Q
    ||||||||||||||||||||||||||||||    
T  14376805 ctaaaaatagtgaatgactgactgtcatca 14376834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 89 - 180
Target Start/End: Original strand, 21336650 - 21336742
Alignment:
Q  89 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||    
T  21336650 tttttcttgcttttcttgttgcttaagcttgcttgtgaactcaaaaatataataaaaaagactctaaaaatagtgaatgactgactgtcatca 21336742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 89 - 180
Target Start/End: Original strand, 21827949 - 21828041
Alignment:
Q  89 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||| |||||||||||||||||||    
T  21827949 tttttcttgcttttcttgctgcttaagcttgcttgcgaactcaaaaatatcataaaaaagactctaaaaatagcgaatgactgactgtcatca 21828041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 71 - 180
Target Start/End: Complemental strand, 17747726 - 17747617
Alignment:
Q  71 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactg 170  Q
    ||||||||||||||| |||||||| || ||| |||| || |||||||| ||| ||||||||||| |||||||||||||| ||||||||||  ||||||||    
T  17747726 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagctttcttatgaactcaaaattatcataaaaagactctaaaaatagcaaatgactg 17747627  T
Q  171 actgtcatca 180  Q
    ||||||||||    
T  17747626 actgtcatca 17747617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 89 - 178
Target Start/End: Complemental strand, 39191422 - 39191333
Alignment:
Q  89 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcat 178  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||   ||||| ||||||||||    
T  39191422 tttttcttgtttttcttgctgcttaagcttgcttgtgaactcaaaagtatcataaaaagactctaaaaataacaaatgattgactgtcat 39191333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 89 - 180
Target Start/End: Original strand, 40916795 - 40916889
Alignment:
Q  89 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat---aaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||| ||   |||||||| ||||||||||  ||||||||||||||||||    
T  40916795 tttttcttgcttttcttgttgcttaagcttgcttgtgaactcaaaaatatgataaaaaaaagactctaaaaatagcaaatgactgactgtcatca 40916889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 89 - 180
Target Start/End: Complemental strand, 18031801 - 18031710
Alignment:
Q  89 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||||||| |||||||||||||||| ||||||| ||||||| |||||||||||||||||| |||||||||  ||||||| |||| ||||||    
T  18031801 tttttcttgcttttcttgctgcttaaacttgcttttgaactcgaaaatatcataaaaagactctaaaaatatggaatgacggactatcatca 18031710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 116 - 180
Target Start/End: Complemental strand, 7270305 - 7270241
Alignment:
Q  116 cttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||    
T  7270305 cttgcttgtgaactcaaaaatatcataaaaagactctaaaaatagcgaatgacagactgtcatca 7270241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 99 - 158
Target Start/End: Complemental strand, 2836761 - 2836702
Alignment:
Q  99 ttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaat 158  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  2836761 ttttcttgctgcttaagtttgcttgtgaactcaaaaatatcataaaaagactctaaaaat 2836702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 89 - 175
Target Start/End: Original strand, 4100346 - 4100431
Alignment:
Q  89 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgt 175  Q
    |||| |||| |||||||||||||||| ||||| |||||||||||||||||||||||||||| || ||||||| |||| |||||||||    
T  4100346 ttttccttgcttttcttgctgcttaatcttgcctgtgaactcaaaaatatcataaaaagactct-aaaatagcgaataactgactgt 4100431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 99 - 180
Target Start/End: Complemental strand, 30065643 - 30065562
Alignment:
Q  99 ttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||||||| ||||||| |||||||||||| ||||||||||||||||||||| |||||||||  |||||| ||| ||||||||    
T  30065643 ttttcttgttgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaataacgaatgaatgattgtcatca 30065562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 89 - 146
Target Start/End: Original strand, 2837584 - 2837641
Alignment:
Q  89 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaa 146  Q
    ||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  2837584 tttttcttgcttttattgctgcttaagcttgcttgtgaactccaaaatatcataaaaa 2837641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 25329505 - 25329456
Alignment:
Q  131 aaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||||||||||||||| || |||||||||| |||||||||||||||||||    
T  25329505 aaaaatatcataaaaaaactctaaaaatagcgaatgactgactgtcatca 25329456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 134
Target Start/End: Complemental strand, 7624366 - 7624303
Alignment:
Q  71 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaa 134  Q
    ||||||||||||||| |||||||| || ||| |||| || |||||||||| |||||||||||||    
T  7624366 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcctgtgaactcaaaa 7624303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 41307405 - 41307445
Alignment:
Q  140 ataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||||||||| |||||||||| |||||||||||||||||||    
T  41307405 ataaaaagactctaaaaatagcgaatgactgactgtcatca 41307445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 89 - 129
Target Start/End: Complemental strand, 33551425 - 33551385
Alignment:
Q  89 tttttcttggttttcttgctgcttaagcttgcttgtgaact 129  Q
    ||||||||| |||||||||||||||| ||| ||||||||||    
T  33551425 tttttcttgcttttcttgctgcttaaacttacttgtgaact 33551385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 105; Significance: 2e-52; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 17 - 180
Target Start/End: Complemental strand, 35411840 - 35411676
Alignment:
Q  17 tcatcctgtactccaaatcgtgatacattttcaacaatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 116  Q
    |||||||||  |||||||||||| || ||||| ||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||||     
T  35411840 tcatcctgtgttccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttctttgttttcttgctgcttaagt 35411741  T
Q  117 ttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtg-aatgactgactgtcatca 180  Q
    ||||||||||||||||||||||||||||||||| ||||||||  || |||||| |||||||||||    
T  35411740 ttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgttgaaatgacagactgtcatca 35411676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 17 - 180
Target Start/End: Original strand, 16185493 - 16185656
Alignment:
Q  17 tcatcctgtactccaaatcgtgatacattttcaacaatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 116  Q
    ||||||||| ||| ||| ||||| |  ||||||||||||||||||| ||||| |||||||||||||||| ||||||||||| ||||||||||||||||||    
T  16185493 tcatcctgtgctctaaaacgtgacatgttttcaacaatcgtgacacgattttgctttcttcaaaatcttatatttttcttgcttttcttgctgcttaagc 16185592  T
Q  117 ttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||| ||||||||||||||||||||||||||||| ||||||||   ||||||| |||||||||||    
T  16185593 ttgtttgtgaactcaaaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatca 16185656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 17 - 180
Target Start/End: Complemental strand, 538178 - 538015
Alignment:
Q  17 tcatcctgtactccaaatcgtgatacattttcaacaatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 116  Q
    |||| |||| ||||||||||||| || ||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||  |||||| |||| |    
T  538178 tcattctgtgctccaaatcgtgacacgttttcaacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttgttttctttgctgtttaaac 538079  T
Q  117 ttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||| |||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  538078 ttgtttgtgaactc-aaaatatcatgaaaaagactctaaaaatagtgaatgactgactgtcatca 538015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 17 - 180
Target Start/End: Original strand, 23299390 - 23299553
Alignment:
Q  17 tcatcctgtactccaaatcgtgatacattttcaacaatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 116  Q
    ||||| ||| |||||||| |||| || ||||| ||||||||||||| ||||| |||||||||||||||||||||| ||||| |||  |||||| |||| |    
T  23299390 tcatcttgtgctccaaattgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttctcttgttttctttgctgtttaaac 23299489  T
Q  117 ttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  23299490 ttgcttgtgaactc-aaaatatcatgaaaaagactctaaaaatagtgaatgactgactgtcatca 23299553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 17 - 180
Target Start/End: Complemental strand, 52198468 - 52198305
Alignment:
Q  17 tcatcctgtactccaaatcgtgatacattttcaacaatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 116  Q
    ||||| ||| ||| ||||||||| || ||||||||||||||||||  ||||| |||||||||||||||||||||||||||| |||  ||| || ||||||    
T  52198468 tcatcatgtgctctaaatcgtgacacgttttcaacaatcgtgacatgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagc 52198369  T
Q  117 ttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||||||||||||| |||||||||| |||| ||||||||| ||||||||||||||||||||||||    
T  52198368 ttgcttgtgaactc-aaaatatcatgaaaatgacactaaacatagtgaatgactgactgtcatca 52198305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 19 - 180
Target Start/End: Complemental strand, 10884179 - 10884018
Alignment:
Q  19 atcctgtactccaaatcgtgatacattttcaacaatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagctt 118  Q
    ||||||| || |||||||||| |  ||||||||||||||||||| ||||| |||||||| ||||||||||||||| ||| |||  |||||| |||| |||    
T  10884179 atcctgtgcttcaaatcgtgacaggttttcaacaatcgtgacacgattttgctttcttcgaaatcttctattttttttgttttcattgctgtttaaactt 10884080  T
Q  119 gcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  10884079 gcttgtgaactc-aaaatatcatgaaaaagactctaaaaatagtgaatgactgactgtcatca 10884018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 17 - 180
Target Start/End: Complemental strand, 6922053 - 6921890
Alignment:
Q  17 tcatcctgtactccaaatcgtgatacattttcaacaatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 116  Q
    ||||| ||| ||||||||||||| || ||||| ||||||||||||| ||||| |||||||||||||||| ||||| ||||| |||  |||||| |||| |    
T  6922053 tcatcatgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttatatttctcttgttttctttgctgtttaaac 6921954  T
Q  117 ttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||||||||||||| |||||||||| |||||| | ||||||||||||||||||||||||||||||    
T  6921953 ttgcttgtgaactc-aaaatatcatgaaaaaggctctaaaaatagtgaatgactgactgtcatca 6921890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 17 - 180
Target Start/End: Original strand, 18645578 - 18645741
Alignment:
Q  17 tcatcctgtactccaaatcgtgatacattttcaacaatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 116  Q
    ||||||||| || |||||||||| || ||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||  |||||| ||||||    
T  18645578 tcatcctgtgcttcaaatcgtgacacgttttcaacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttgttttctttgctgtttaagc 18645677  T
Q  117 ttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||| |||||||||   ||||||||| |||| ||||||||||| ||||||||||||| ||||||||    
T  18645678 ttgtttgtgaact-tgaaatatcatgaaaatgacactaaaaacagtgaatgactgattgtcatca 18645741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 89 - 180
Target Start/End: Complemental strand, 53815062 - 53814971
Alignment:
Q  89 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  53815062 tttttcttgtttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatagtgaatgactgactgtcatca 53814971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 82 - 180
Target Start/End: Original strand, 29344674 - 29344773
Alignment:
Q  82 tcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataa-aaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||| |||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  29344674 tcttcaatttttcttgcttttcttgctgcttaatcttgcttgtgaactcaaaaatatcataagaaagactctaaaaatagtgaatgactgactgtcatca 29344773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 55 - 180
Target Start/End: Original strand, 10107489 - 10107614
Alignment:
Q  55 cgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacacta 153  Q
    |||||||| ||||| |||||||||||||||||||||||||||| |||  ||| || |||||||||||||||||||| |||||||||| |||| |||||||    
T  10107489 cgtgacacgattttgctttcttcaaaatcttctatttttcttgttttctttgttgtttaagcttgcttgtgaactc-aaaatatcatgaaaatgacacta 10107587  T
Q  154 aaaatagtgaatgactgactgtcatca 180  Q
    |||| ||||||||||||||||||||||    
T  10107588 aaaacagtgaatgactgactgtcatca 10107614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 70 - 180
Target Start/End: Complemental strand, 3839903 - 3839790
Alignment:
Q  70 ctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat---aaaaagacactaaaaatagtgaatg 166  Q
    ||||||||||  |||||  ||||||||| |||||||||||||||||||||||||||||||||||||||||||   ||||| || ||||||||||||||||    
T  3839903 ctttcttcaatttcttcggtttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcattaaaaaaaaactctaaaaatagtgaatg 3839804  T
Q  167 actgactgtcatca 180  Q
    ||||||||||||||    
T  3839803 actgactgtcatca 3839790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 89 - 180
Target Start/End: Complemental strand, 16243257 - 16243166
Alignment:
Q  89 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||    
T  16243257 tttttcttgcttttcttgctgcttaatcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatagcgaatgactgattgtcatca 16243166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 9380102 - 9380012
Alignment:
Q  89 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatc 179  Q
    ||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  9380102 tttttcttgcttttcttattgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatagcgaatgactgactgtcatc 9380012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 54460457 - 54460367
Alignment:
Q  90 ttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||||||  |||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  54460457 ttttctttcttttcttgttgcttaagattgcttgtgaactcaaaaatatcataaaaagactctaaaaatagtgaatgactgactgtcatca 54460367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 34984668 - 34984758
Alignment:
Q  90 ttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||    
T  34984668 ttttcttgcttttcttgttgcttaatcttgcttgtgaactcaaaaatatcataaaaagactctaaaaataacgaatgactgactgtcatca 34984758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 71 - 180
Target Start/End: Original strand, 19302255 - 19302364
Alignment:
Q  71 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactg 170  Q
    ||||||||||||||||||||||||| | ||| |||| || ||||||||||||||||||||||||||||||||||||||| |||||||||   |||||| |    
T  19302255 tttcttcaaaatcttctatttttctcgctttccttgttgtttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatatgaaatgacgg 19302354  T
Q  171 actgtcatca 180  Q
    ||| ||||||    
T  19302355 actatcatca 19302364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 93 - 180
Target Start/End: Complemental strand, 10880863 - 10880776
Alignment:
Q  93 tcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||  ||| ||||||||||||||    
T  10880863 tcttgcttttcttgctgcttaatcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatagcaaataactgactgtcatca 10880776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 89 - 180
Target Start/End: Complemental strand, 41976412 - 41976321
Alignment:
Q  89 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||| ||| ||||||||||| |||| ||||||||||||||||||||||| ||||||| || |||||||||| |||||||||||||||||||    
T  41976412 tttttgttgcttttcttgctgtttaatcttgcttgtgaactcaaaaatattataaaaacactctaaaaatagcgaatgactgactgtcatca 41976321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 89 - 172
Target Start/End: Original strand, 54736759 - 54736842
Alignment:
Q  89 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgac 172  Q
    ||||| ||| |||||||| ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||    
T  54736759 ttttttttgcttttcttgttgcttaagcttgcttgtgaactcaaaagtatcataaaaagactctaaaaatagtgaatgattgac 54736842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 99 - 180
Target Start/End: Original strand, 20729395 - 20729477
Alignment:
Q  99 ttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||| || |||||||||| |||||||||||||||||||    
T  20729395 ttttcttgctgcttaagcttgcttgtgaactaaaaaatatcataaaaaaaactctaaaaatagcgaatgactgactgtcatca 20729477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 88 - 177
Target Start/End: Complemental strand, 43808970 - 43808881
Alignment:
Q  88 atttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtca 177  Q
    |||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||  |||| ||| |||||||    
T  43808970 attttttttgcttttcttgctgcttaatcttgcttgtgaactcaaaaatatcataaaaagactctaaaaataacgaataactaactgtca 43808881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 82 - 158
Target Start/End: Complemental strand, 31548649 - 31548573
Alignment:
Q  82 tcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaat 158  Q
    ||||| |||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  31548649 tcttcaatttttcttgcttttcttactgcttaagcttggttgtgaactcaaaaatatcataaaaagactctaaaaat 31548573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 76 - 180
Target Start/End: Original strand, 17532565 - 17532669
Alignment:
Q  76 tcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactg 174  Q
    |||||||||||| ||||||||| |||  ||| || |||||||||||||||||||| |||||||||| |||| ||||||||||| ||||||||||||||||    
T  17532565 tcaaaatcttctttttttcttgttttctttgttgtttaagcttgcttgtgaactc-aaaatatcatgaaaatgacactaaaaacagtgaatgactgactg 17532663  T
Q  175 tcatca 180  Q
    | ||||    
T  17532664 taatca 17532669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 78 - 159
Target Start/End: Original strand, 19305445 - 19305526
Alignment:
Q  78 aaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaata 159  Q
    |||| ||||||||||||| | ||| ||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||    
T  19305445 aaaaacttctatttttctcgctttccttgctgtttaagcttgcttgtgaactcaaaaatattataaaaagactctaaaaata 19305526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 158
Target Start/End: Original strand, 22994439 - 22994570
Alignment:
Q  27 ctccaaatcgtgatacatttt-caacaatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtg 125  Q
    ||||||||||||| || |||| |||||| |||| ||| |||| ||||||  || |||||||  ||||||||| ||| ||||||| |||||||||||||||    
T  22994439 ctccaaatcgtgacacgtttttcaacaaccgtgtcactatttcactttcaccacaatcttcagtttttcttgctttccttgctgtttaagcttgcttgtg 22994538  T
Q  126 aactcaaaaatatcataaaaagacactaaaaat 158  Q
     |||| |||||||||||| |  |||||||||||    
T  22994539 gactc-aaaatatcataatattacactaaaaat 22994570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 52 - 96
Target Start/End: Original strand, 55032789 - 55032833
Alignment:
Q  52 aatcgtgacacaattttactttcttcaaaatcttctatttttctt 96  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||    
T  55032789 aatcgtgacacgattttgctttcttcaaaatcttctatttttctt 55032833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 180
Target Start/End: Complemental strand, 31857091 - 31857055
Alignment:
Q  144 aaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||||| ||||||||||||||||||||||||||||||    
T  31857091 aaagactctaaaaatagtgaatgactgactgtcatca 31857055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 50462415 - 50462455
Alignment:
Q  140 ataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||||||||| |||||||||||||||||| |||||||||||    
T  50462415 ataaaaagactctaaaaatagtgaatgacggactgtcatca 50462455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 141 - 180
Target Start/End: Complemental strand, 9157547 - 9157508
Alignment:
Q  141 taaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||||||| |||||||||||| |||||||||||||||||    
T  9157547 taaaaagactctaaaaatagtgcatgactgactgtcatca 9157508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 180
Target Start/End: Original strand, 2280741 - 2280779
Alignment:
Q  142 aaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||||||| |||||||||||| |||||||||||||||||    
T  2280741 aaaaagactctaaaaatagtgcatgactgactgtcatca 2280779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 180
Target Start/End: Original strand, 42355298 - 42355336
Alignment:
Q  142 aaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||| || ||||||||||||||||||||||||||||||    
T  42355298 aaaaaaactctaaaaatagtgaatgactgactgtcatca 42355336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 180
Target Start/End: Complemental strand, 43926164 - 43926124
Alignment:
Q  140 ataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||||||||| |||||||||| ||||||| |||||||||||    
T  43926164 ataaaaagactctaaaaatagcgaatgacggactgtcatca 43926124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 101; Significance: 5e-50; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 17 - 180
Target Start/End: Original strand, 19865480 - 19865643
Alignment:
Q  17 tcatcctgtactccaaatcgtgatacattttcaacaatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 116  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||| |||||  ||||||||||||||||||||||||||| |||  ||| || ||||||    
T  19865480 tcatcctgtgctccaaatcgtgatacattttcaataatcgtgacacgattttgttttcttcaaaatcttctatttttcttgctttctttgttgtttaagc 19865579  T
Q  117 ttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||||||||||||| |||||||||| |||| ||||||||||| ||||||||||||||||||||||    
T  19865580 ttgcttgtgaactc-aaaatatcatgaaaatgacactaaaaacagtgaatgactgactgtcatca 19865643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 28 - 180
Target Start/End: Original strand, 3798644 - 3798796
Alignment:
Q  28 tccaaatcgtgatacattttcaacaatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaa 127  Q
    |||||||||||| |||||||||||||||||||||  ||||| |||||||||||||||||||||||||||| |||  |||||| |||| ||||||||||||    
T  3798644 tccaaatcgtgacacattttcaacaatcgtgacaagattttgctttcttcaaaatcttctatttttcttgctttctttgctgtttaaacttgcttgtgaa 3798743  T
Q  128 ctcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||| |||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  3798744 ctc-aaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 3798796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 17 - 180
Target Start/End: Complemental strand, 15431327 - 15431164
Alignment:
Q  17 tcatcctgtactccaaatcgtgatacattttcaacaatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 116  Q
    ||||||||| ||||||||||||| || ||||| ||||||||||||| ||||| |||||||||||||||||||||| ||||| |||  |||||| |||| |    
T  15431327 tcatcctgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttctcttgttttctttgctgtttaaac 15431228  T
Q  117 ttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  15431227 ttgcttgtgaactc-aaaatatcatgaaaaagactctaaaaatagtgaatgactgactgtcatca 15431164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 17 - 180
Target Start/End: Complemental strand, 15437941 - 15437778
Alignment:
Q  17 tcatcctgtactccaaatcgtgatacattttcaacaatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 116  Q
    ||||||||| ||||||||||||| || ||||| ||||||||||||| ||||| |||||||||||||||||||||| ||||| |||  |||||| |||| |    
T  15437941 tcatcctgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttctcttgttttctttgctgtttaaac 15437842  T
Q  117 ttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  15437841 ttgcttgtgaactc-aaaatatcatgaaaaagactctaaaaatagtgaatgactgactgtcatca 15437778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 17 - 180
Target Start/End: Complemental strand, 18910767 - 18910604
Alignment:
Q  17 tcatcctgtactccaaatcgtgatacattttcaacaatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 116  Q
    ||||| ||| ||| ||||||||| || ||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||  ||| || |||||     
T  18910767 tcatcatgtgctctaaatcgtgacacgttttcaacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagt 18910668  T
Q  117 ttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  18910667 ttgcttgtgaactc-aaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 18910604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 179
Target Start/End: Original strand, 19861124 - 19861286
Alignment:
Q  17 tcatcctgtactccaaatcgtgatacattttcaacaatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 116  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||   |||||||||||||| ||||||||||| |||  |||||| ||||||    
T  19861124 tcatcctgtgctccaaatcgtgatacgttttcaacaatcgtgacacaattttgtgttcttcaaaatcttatatttttcttgctttctttgctgtttaagc 19861223  T
Q  117 ttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatc 179  Q
    |||||||||||||| |||||||||| |||| ||||||||||| |||||||||||| ||| ||||    
T  19861224 ttgcttgtgaactc-aaaatatcatgaaaatgacactaaaaacagtgaatgactgtctgccatc 19861286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 30 - 180
Target Start/End: Complemental strand, 5669778 - 5669628
Alignment:
Q  30 caaatcgtgatacattttcaacaatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaact 129  Q
    ||||| |||| || ||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||  ||| || |||| ||||||||||||||    
T  5669778 caaattgtgacacgttttcaacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttgttttctttgttgtttaaacttgcttgtgaact 5669679  T
Q  130 caaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    | |||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  5669678 c-aaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 5669628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 30 - 180
Target Start/End: Original strand, 33410812 - 33410962
Alignment:
Q  30 caaatcgtgatacattttcaacaatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaact 129  Q
    |||||||| | || ||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||  ||| || |||| ||||||||||||||    
T  33410812 caaatcgtaacacgttttcaacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttgttttctttgttgtttaaacttgcttgtgaact 33410911  T
Q  130 caaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    | |||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  33410912 c-aaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 33410962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 17 - 180
Target Start/End: Original strand, 5721808 - 5721971
Alignment:
Q  17 tcatcctgtactccaaatcgtgatacattttcaacaatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 116  Q
    ||||||||| || |||||||||| || ||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||  |||||| ||||||    
T  5721808 tcatcctgtgcttcaaatcgtgacacgttttcaacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttgttttctttgctgtttaagc 5721907  T
Q  117 ttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||| |||||||||   ||||||||| |||| ||||||||||| ||||||||||||| ||||||||    
T  5721908 ttgtttgtgaact-tgaaatatcatgaaaatgacactaaaaacagtgaatgactgattgtcatca 5721971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 64 - 180
Target Start/End: Complemental strand, 14571142 - 14571026
Alignment:
Q  64 attttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtga 163  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||    
T  14571142 attttgctttcttcaaaatcttctatttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgtgga 14571043  T
Q  164 atgactgactgtcatca 180  Q
    ||||| ||| |||||||    
T  14571042 atgacagaccgtcatca 14571026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 31 - 180
Target Start/End: Complemental strand, 5680618 - 5680469
Alignment:
Q  31 aaatcgtgatacattttcaacaatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactc 130  Q
    |||| |||| || ||||||||||||||||||  ||||| |||| ||||||||||||||||||||||| |||||||| || |||||||||||| |||||||    
T  5680618 aaattgtgacacgttttcaacaatcgtgacatgattttgcttttttcaaaatcttctatttttcttgcttttcttgttgtttaagcttgcttatgaactc 5680519  T
Q  131 aaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||||||||||||||||| ||||||||   ||||||| | |||||||||    
T  5680518 aaaaatatcataaaaagactctaaaaatgtggaatgacagtctgtcatca 5680469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 17 - 180
Target Start/End: Complemental strand, 9717114 - 9716951
Alignment:
Q  17 tcatcctgtactccaaatcgtgatacattttcaacaatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 116  Q
    ||||||||| ||| |||| |||  || ||||||||||||||||||| ||||| |||||||| ||||||||||||||||||| |||  ||| || |||| |    
T  9717114 tcatcctgtgctctaaattgtgccacgttttcaacaatcgtgacacgattttgctttcttcgaaatcttctatttttcttgttttctttgttgtttaaac 9717015  T
Q  117 ttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||||||||||||| |||||||||| |||| |||||||||||||||||||||| |||||||||||    
T  9717014 ttgcttgtgaactc-aaaatatcatgaaaatgacactaaaaatagtgaatgaccgactgtcatca 9716951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 17 - 180
Target Start/End: Complemental strand, 12237517 - 12237354
Alignment:
Q  17 tcatcctgtactccaaatcgtgatacattttcaacaatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 116  Q
    |||||||||| |  |||| |||| |||||||| ||||||||||||| ||||| |||||||||||||||||||||| ||||| |||  ||| || ||||||    
T  12237517 tcatcctgtattttaaattgtgacacattttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttctcttgctttctttgttgtttaagc 12237418  T
Q  117 ttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||||||||||||| |||||||||| |||| ||||||||||| ||||||||| ||||| ||||||    
T  12237417 ttgcttgtgaactc-aaaatatcatgaaaatgacactaaaaacagtgaatgaatgactatcatca 12237354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 245 - 340
Target Start/End: Complemental strand, 18449231 - 18449136
Alignment:
Q  245 agtcgtgtgcttggatatctttacttaatgatgttagtgctattgagatgatgttgtagttctaagaatgatgtgataatttgttgatgatgatgt 340  Q
    |||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  18449231 agtcgtgtgcttggatatctttacttgatgatgttagtgcacttgagatgatgttgtagttgtaagaatgatgtgatgatttgttgatgatgatgt 18449136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 89 - 172
Target Start/End: Complemental strand, 21419070 - 21418987
Alignment:
Q  89 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgac 172  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  21419070 tttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagcgaatgactgac 21418987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 30 - 180
Target Start/End: Complemental strand, 49269885 - 49269735
Alignment:
Q  30 caaatcgtgatacattttcaacaatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaact 129  Q
    |||||||||| || |||||||||||||||| || ||||| |||||||||||||||||||||||||||| |||  |||| | ||||||||| |||  ||||    
T  49269885 caaatcgtgacacgttttcaacaatcgtgatacgattttgctttcttcaaaatcttctatttttcttgctttctttgccgtttaagcttgtttgctaact 49269786  T
Q  130 caaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||||||||||||||| || ||||||||    ||||||||||||||||||    
T  49269785 caaaaatatcataaaaaaactctaaaaatgtaaaatgactgactgtcatca 49269735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 89 - 180
Target Start/End: Complemental strand, 3718427 - 3718336
Alignment:
Q  89 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||    
T  3718427 tttttcttgcttttcttgttgcttaagcttgcttgtgaactcaaaaatatcataaaaatactctaaaaatagtgaatgagtgactgtcatca 3718336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 89 - 180
Target Start/End: Complemental strand, 12782197 - 12782106
Alignment:
Q  89 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||| |||||||||||||||||||    
T  12782197 tttttcttgcttttcttgctgcttaagcttgcttgtaaactcaaaaatatcataaaatgactctaaaaatagcgaatgactgactgtcatca 12782106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 31 - 130
Target Start/End: Original strand, 40617663 - 40617762
Alignment:
Q  31 aaatcgtgatacattttcaacaatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactc 130  Q
    ||||||||| || ||||||||||||||| ||| ||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  40617663 aaatcgtgacacgttttcaacaatcgtggcacgattttgccttcttcaaaatcttctatttttcttgcttttcttgctgcttaagcttgcttgtgaactc 40617762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 89 - 172
Target Start/End: Complemental strand, 40794283 - 40794200
Alignment:
Q  89 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgac 172  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  40794283 tttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatagcgaatgactgac 40794200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 71 - 180
Target Start/End: Complemental strand, 29324088 - 29323979
Alignment:
Q  71 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactg 170  Q
    ||||||||||||||| |||||||| || ||| |||| || |||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||    
T  29324088 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcttgtgaactcaaaattatcataaaaagactctaaaaatagcaaatgactg 29323989  T
Q  171 actgtcatca 180  Q
    ||||||||||    
T  29323988 actgtcatca 29323979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 52 - 180
Target Start/End: Original strand, 37104113 - 37104241
Alignment:
Q  52 aatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagaca 150  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||| |||  |||||| |||||||||||||||||||| |||||||||| |||| || |    
T  37104113 aatcgtgacacgattttgctttcttcaaaatcttctatttttcttgttttctttgctgtttaagcttgcttgtgaactc-aaaatatcatgaaaatgata 37104211  T
Q  151 ctaaaaatagtgaatgactgactgtcatca 180  Q
    ||||| | ||||||||||||| ||||||||    
T  37104212 ctaaacacagtgaatgactgagtgtcatca 37104241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 71 - 180
Target Start/End: Original strand, 44809795 - 44809904
Alignment:
Q  71 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactg 170  Q
    ||||||||||||||| |||||||| || ||| |||| || |||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||    
T  44809795 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcttgtgaactcaaaattatcataaaaagactctaaaaatagcaaatgactg 44809894  T
Q  171 actgtcatca 180  Q
    ||||||||||    
T  44809895 actgtcatca 44809904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 17 - 134
Target Start/End: Complemental strand, 53093884 - 53093767
Alignment:
Q  17 tcatcctgtactccaaatcgtgatacattttcaacaatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 116  Q
    ||||||||| |||||| |||||| || ||||||||||||||| ||| ||||||||||||||||||||||| | ||||| || ||| ||||||| ||||||    
T  53093884 tcatcctgtgctccaattcgtgacacgttttcaacaatcgtgtcacgattttactttcttcaaaatcttcaacttttcatgctttccttgctgtttaagc 53093785  T
Q  117 ttgcttgtgaactcaaaa 134  Q
    ||||||||||||||||||    
T  53093784 ttgcttgtgaactcaaaa 53093767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 92 - 180
Target Start/End: Complemental strand, 44164090 - 44164001
Alignment:
Q  92 ttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcata-aaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||    
T  44164090 ttcttgcttttcttgctgcttaatcttgcttgtgaactcaaaaatatcataaaaaagactttaaaaatagtgaatgactgactgtcatca 44164001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 99 - 180
Target Start/End: Original strand, 52007350 - 52007431
Alignment:
Q  99 ttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||| |||||||||||||||||||    
T  52007350 ttttcttgctgcttaagcttgcttttgaactcaacaatatcataaaaagactctaaaaatagcgaatgactgactgtcatca 52007431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 89 - 180
Target Start/End: Original strand, 15430674 - 15430766
Alignment:
Q  89 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||  |||||||||||||||||||    
T  15430674 tttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaaagactctgaaaataacgaatgactgactgtcatca 15430766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 89 - 180
Target Start/End: Original strand, 15437288 - 15437380
Alignment:
Q  89 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||  |||||||||||||||||||    
T  15437288 tttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaaagactctgaaaataacgaatgactgactgtcatca 15437380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 89 - 180
Target Start/End: Complemental strand, 27013321 - 27013229
Alignment:
Q  89 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcata-aaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||||||| |||||||| ||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||||||    
T  27013321 tttttcttgcttttcttgttgcttaagcttgcctgtgaactcaaaaatatcataaaaaagactctaaaaatagcgaatgactgactgtcatca 27013229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 99 - 180
Target Start/End: Original strand, 53010377 - 53010458
Alignment:
Q  99 ttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||    
T  53010377 ttttcttgctgcttaatcttacttgtgaactcaaaaatatcataaaaagactctaaaaataatgaatgactgactatcatca 53010458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 89 - 180
Target Start/End: Original strand, 27677874 - 27677966
Alignment:
Q  89 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||| ||| |||||||||||||||| |||| ||||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||    
T  27677874 ttttttttgcttttcttgctgcttaatcttgattgtgaactcaaaaatatcataaaaaagactctaaaaatagtgaataactgactgtcatca 27677966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 89 - 180
Target Start/End: Original strand, 24044966 - 24045057
Alignment:
Q  89 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||| |||| |||||||||||||||| |||| |||||||||||||||||||| |||||||| |||||||||  |||||||||||||||||||    
T  24044966 ttttccttgcttttcttgctgcttaatcttgtttgtgaactcaaaaatatcaaaaaaagactctaaaaataacgaatgactgactgtcatca 24045057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 74 - 175
Target Start/End: Original strand, 34320738 - 34320839
Alignment:
Q  74 cttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgact 173  Q
    |||||||||||| |||||||| || ||| |||  || |||||||||||||||||||||||| |||||||||||||| ||||||||||  |||||||||||    
T  34320738 cttcaaaatcttgtatttttcatgctttccttattgtttaagcttgcttgtgaactcaaaattatcataaaaagactctaaaaatagcaaatgactgact 34320837  T
Q  174 gt 175  Q
    ||    
T  34320838 gt 34320839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 72 - 180
Target Start/End: Complemental strand, 56198137 - 56198029
Alignment:
Q  72 ttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactg 170  Q
    ||||||||||||||||||||||| || ||| |||| || |||||||||||||||||||| |||| ||||| |||| |||||||||||||  |||||||||    
T  56198137 ttcttcaaaatcttctatttttcatgctttccttgttgtttaagcttgcttgtgaactc-aaaacatcatgaaaatgacactaaaaataacgaatgactg 56198039  T
Q  171 actgtcatca 180  Q
    ||||||||||    
T  56198038 actgtcatca 56198029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 89 - 180
Target Start/End: Complemental strand, 19826793 - 19826701
Alignment:
Q  89 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaa-tatcataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||||||| |||||||| ||||||| ||| |||||||||||||||| | |||||||||||| |||||||||| |||||||||||||||||||    
T  19826793 tttttcttgcttttcttgttgcttaatcttacttgtgaactcaaaaaatttcataaaaagactctaaaaatagcgaatgactgactgtcatca 19826701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 89 - 180
Target Start/End: Original strand, 27691933 - 27692025
Alignment:
Q  89 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||||||| |||||||||||||||| |||||||||||| ||||||||||| | |||||||| ||||||||||||||||||| | ||||||||    
T  27691933 tttttcttgcttttcttgctgcttaatcttgcttgtgaattcaaaaatatcgtaaaaaagactctaaaaatagtgaatgactaattgtcatca 27692025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 99 - 180
Target Start/End: Complemental strand, 19820032 - 19819950
Alignment:
Q  99 ttttcttgctgcttaagcttgcttgtgaactcaaaaa-tatcataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||||||||| ||||| |||||||||||||||||||| ||||||||||||||  ||||||||| |||||||||||||||||||    
T  19820032 ttttcttgctacttaatcttgcttgtgaactcaaaaaatatcataaaaagactttaaaaatagcgaatgactgactgtcatca 19819950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 71 - 180
Target Start/End: Complemental strand, 56194831 - 56194722
Alignment:
Q  71 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgact 169  Q
    |||||||||||||||||||||||| || ||| |||| || |||||||||||||||||||| |||| ||||| |||| |||||||||||||  |||||| |    
T  56194831 tttcttcaaaatcttctatttttcatgctttccttgttgtttaagcttgcttgtgaactc-aaaacatcatgaaaatgacactaaaaataacgaatgatt 56194733  T
Q  170 gactgtcatca 180  Q
    |||||||||||    
T  56194732 gactgtcatca 56194722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 99 - 180
Target Start/End: Complemental strand, 35509280 - 35509201
Alignment:
Q  99 ttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||||||| ||||||| ||||||||||||||||||||||||||| ||||  ||||||||||  |||||||||||||| ||||    
T  35509280 ttttcttgttgcttaatcttgcttgtgaactcaaaaatatcatataaag--actaaaaataacgaatgactgactgttatca 35509201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 71 - 180
Target Start/End: Complemental strand, 47114885 - 47114776
Alignment:
Q  71 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgact 169  Q
    ||||||||||||||| |||||||| || ||| |||  || |||||||||||||||||||| |||| || || |||| |||||||||||||  ||||||||    
T  47114885 tttcttcaaaatcttgtatttttcatgttttccttattgtttaagcttgcttgtgaactc-aaaacataatgaaaatgacactaaaaataaagaatgact 47114787  T
Q  170 gactgtcatca 180  Q
    |||||||||||    
T  47114786 gactgtcatca 47114776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 75 - 180
Target Start/End: Original strand, 15405793 - 15405898
Alignment:
Q  75 ttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgact 173  Q
    ||||||||||| |||||||| ||  || |||| || |||||||||||||||||||| |||| ||||| |||| |||||||||||||  ||||||||||||    
T  15405793 ttcaaaatcttgtatttttcatgcgttccttgttgtttaagcttgcttgtgaactc-aaaacatcatgaaaatgacactaaaaataaagaatgactgact 15405891  T
Q  174 gtcatca 180  Q
     ||||||    
T  15405892 ttcatca 15405898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 71 - 180
Target Start/End: Complemental strand, 33926230 - 33926121
Alignment:
Q  71 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaa-gacactaaaaatagtgaatgact 169  Q
    ||||||||||||||| |||||||| || ||| |||| || |||||||||||||||||||||| |  |||||  ||| |||||||||| ||   |||||||    
T  33926230 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcttgtgaactcaagac-atcatgcaaatgacactaaaagtaacaaatgact 33926132  T
Q  170 gactgtcatca 180  Q
    |||||||||||    
T  33926131 gactgtcatca 33926121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 134
Target Start/End: Original strand, 15812973 - 15813036
Alignment:
Q  71 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaa 134  Q
    ||||||||||||||| |||||||| || ||| |||| || |||| |||||||||||||||||||    
T  15812973 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaaacttgcttgtgaactcaaaa 15813036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 89 - 130
Target Start/End: Original strand, 37741471 - 37741512
Alignment:
Q  89 tttttcttggttttcttgctgcttaagcttgcttgtgaactc 130  Q
    ||||||||| ||||||||||| ||||||||||||||||||||    
T  37741471 tttttcttgtttttcttgctgtttaagcttgcttgtgaactc 37741512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 38284375 - 38284415
Alignment:
Q  140 ataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||||||||| |||||||||| |||||||||||||||||||    
T  38284375 ataaaaagactctaaaaatagcgaatgactgactgtcatca 38284415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 152 - 180
Target Start/End: Complemental strand, 17669475 - 17669447
Alignment:
Q  152 taaaaatagtgaatgactgactgtcatca 180  Q
    |||||||||||||||||||||||||||||    
T  17669475 taaaaatagtgaatgactgactgtcatca 17669447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 34018659 - 34018699
Alignment:
Q  140 ataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||||||||| |||||||||| ||||||| |||||||||||    
T  34018659 ataaaaagactctaaaaatagcgaatgacggactgtcatca 34018699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 48416408 - 48416448
Alignment:
Q  140 ataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||||||||| |||||||||| ||||||| |||||||||||    
T  48416408 ataaaaagactctaaaaatagcgaatgacggactgtcatca 48416448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 97; Significance: 1e-47; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 17 - 180
Target Start/End: Original strand, 36809272 - 36809435
Alignment:
Q  17 tcatcctgtactccaaatcgtgatacattttcaacaatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 116  Q
    ||||||||| ||||||||||||| || ||||||||||||||||||||| ||| ||||| |||||||||||||||||||||| |||  ||| || |||| |    
T  36809272 tcatcctgtgctccaaatcgtgacacgttttcaacaatcgtgacacaaatttgctttcctcaaaatcttctatttttcttgttttctttgttgtttaaac 36809371  T
Q  117 ttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  36809372 ttgcttgtgaactc-aaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 36809435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 17 - 180
Target Start/End: Complemental strand, 25869998 - 25869835
Alignment:
Q  17 tcatcctgtactccaaatcgtgatacattttcaacaatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 116  Q
    ||||||||| ||||||||||||| || ||||| ||||||||||||| ||||| |||||||||||||||||||||| ||||| |||  ||| || |||| |    
T  25869998 tcatcctgtgctccaaatcgtgacacgttttcgacaatcgtgacacgatttttctttcttcaaaatcttctatttctcttgttttctttgttgtttaaac 25869899  T
Q  117 ttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    || ||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  25869898 tttcttgtgaactc-aaaatatcatgaaaaagactctaaaaatagtgaatgactgactgtcatca 25869835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 17 - 180
Target Start/End: Complemental strand, 25873366 - 25873203
Alignment:
Q  17 tcatcctgtactccaaatcgtgatacattttcaacaatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 116  Q
    ||||||||| ||||||||| ||| || ||||| ||||||||||||| ||||| |||||||||||||||||||||| ||||| |||  ||| || |||| |    
T  25873366 tcatcctgtgctccaaatcatgacacgttttcgacaatcgtgacacgatttttctttcttcaaaatcttctatttctcttgttttctttgttgtttaaac 25873267  T
Q  117 ttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  25873266 ttgcttgtgaactc-aaaatatcatgaaaaagactctaaaaatagtgaatgactgactgtcatca 25873203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 17 - 180
Target Start/End: Complemental strand, 26358835 - 26358672
Alignment:
Q  17 tcatcctgtactccaaatcgtgatacattttcaacaatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 116  Q
    ||||||||| ||||||||||||  || ||||||||||||||||||| ||||| |||||||| |||||||||||||||||||  ||  |||||| |||| |    
T  26358835 tcatcctgtgctccaaatcgtgccacgttttcaacaatcgtgacacgattttgctttcttcgaaatcttctatttttcttgtcttctttgctgtttaaac 26358736  T
Q  117 ttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    || ||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  26358735 ttccttgtgaactc-aaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 26358672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 18 - 180
Target Start/End: Complemental strand, 16788550 - 16788389
Alignment:
Q  18 catcctgtactccaaatcgtgatacattttcaacaatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagct 117  Q
    |||||||  ||| ||||||||| || ||||||||||||||||||| ||| | ||||| |||||||||| ||||||||||| |||||||| ||||||||||    
T  16788550 catcctgcgctctaaatcgtgacacgttttcaacaatcgtgacacgattgtgctttcatcaaaatcttatatttttcttgcttttcttgttgcttaagct 16788451  T
Q  118 tgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||||||||||||||| |||||| ||||||  ||||||||||  ||||||||||||||||||    
T  16788450 tgcttgtgaactcaaaattatcat-aaaagattctaaaaatagcaaatgactgactgtcatca 16788389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 17 - 180
Target Start/End: Original strand, 25139877 - 25140040
Alignment:
Q  17 tcatcctgtactccaaatcgtgatacattttcaacaatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 116  Q
    ||||| ||| ||||||||||||| || || |||||||||||||||| ||||| |||||||| ||||||||||||||||||| |||  |||| | ||||||    
T  25139877 tcatcttgtgctccaaatcgtgacacgttgtcaacaatcgtgacacgattttgctttcttcgaaatcttctatttttcttgctttctttgccgtttaagc 25139976  T
Q  117 ttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    || ||||||||||||||||||||||||||| || |||||| |   |||||||||||||||||||    
T  25139977 ttacttgtgaactcaaaaatatcataaaaaaactctaaaattgtggaatgactgactgtcatca 25140040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 17 - 180
Target Start/End: Original strand, 25821754 - 25821922
Alignment:
Q  17 tcatcctgtactccaaatcgtgatacattttcaacaatcgtgacacaattttactttcttc-aaaatcttctatttttcttggttttcttgctgcttaag 115  Q
    |||||||||  |||||||||||| || |||||||||||| |||||| ||||| |||||||| |||||||||||||||||||| |||  ||| || |||||    
T  25821754 tcatcctgtgttccaaatcgtgacaccttttcaacaatcttgacacgattttgctttcttcaaaaatcttctatttttcttgttttctttgttgtttaag 25821853  T
Q  116 cttgcttgtgaactcaaaa---atatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||||||||||||||||||   ||||||| |||| ||||||||||| ||||||||||||||||||||||    
T  25821854 cttgcttgtgaactcaaaatatatatcatgaaaatgacactaaaaacagtgaatgactgactgtcatca 25821922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 17 - 180
Target Start/End: Original strand, 38006123 - 38006286
Alignment:
Q  17 tcatcctgtactccaaatcgtgatacattttcaacaatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 116  Q
    ||||||||| ||||||||||||| || ||||| |||||||| |||| ||||| |||||||||||||||||||||| ||||| |||  ||| || ||||||    
T  38006123 tcatcctgtgctccaaatcgtgacacgttttcgacaatcgtcacacgattttgctttcttcaaaatcttctatttctcttgctttctttgttgtttaagc 38006222  T
Q  117 ttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||| |||||||||| |||||||||| |||| ||||||||||| ||||||||||||||||| ||||    
T  38006223 ttgtttgtgaactc-aaaatatcatgaaaatgacactaaaaacagtgaatgactgactgtaatca 38006286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 89 - 180
Target Start/End: Complemental strand, 10600042 - 10599951
Alignment:
Q  89 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  10600042 tttttcttgtttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagattctaaaaatagtgaatgactgactgtcatca 10599951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 52 - 180
Target Start/End: Complemental strand, 15466298 - 15466170
Alignment:
Q  52 aatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagaca 150  Q
    ||||||||||| ||||| |||||||||||||||||||||| ||||| |||  ||| || |||||||||||||||||||| |||||||||| |||| ||||    
T  15466298 aatcgtgacacgattttgctttcttcaaaatcttctatttctcttgatttctttgttgtttaagcttgcttgtgaactc-aaaatatcatgaaaatgaca 15466200  T
Q  151 ctaaaaatagtgaatgactgactgtcatca 180  Q
    ||||||||||||||||||||| ||||||||    
T  15466199 ctaaaaatagtgaatgactgattgtcatca 15466170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 27 - 180
Target Start/End: Original strand, 30275538 - 30275691
Alignment:
Q  27 ctccaaatcgtgatacattttcaacaatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtga 126  Q
    ||||||||||||| || ||||||||||||||||||| | ||| ||||| |||||||||||||||||||||| |||  ||| || |||| |||| ||||||    
T  30275538 ctccaaatcgtgacacgttttcaacaatcgtgacacgaatttgctttcctcaaaatcttctatttttcttgttttctttgttgtttaaacttgtttgtga 30275637  T
Q  127 actcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    | || |||||||||| |||| ||||||||||||| ||||||||||||| ||||||    
T  30275638 attc-aaaatatcatgaaaatgacactaaaaatattgaatgactgactatcatca 30275691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 71 - 180
Target Start/End: Complemental strand, 38014745 - 38014636
Alignment:
Q  71 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactg 170  Q
    ||||||||||||||| |||||||| || ||| |||| || |||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||    
T  38014745 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcttgtgaactcaaaattatcataaaaagactctaaaaatagcaaatgactg 38014646  T
Q  171 actgtcatca 180  Q
    ||||||||||    
T  38014645 actgtcatca 38014636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 89 - 180
Target Start/End: Complemental strand, 3874573 - 3874482
Alignment:
Q  89 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||||||| |||||||||||||||| |||| ||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||    
T  3874573 tttttcttgcttttcttgctgcttaatcttgtttgtgaactcaaaaatatcctaaaaagactctaaaaataatgaatgactgactgtcatca 3874482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 71 - 180
Target Start/End: Original strand, 31430529 - 31430638
Alignment:
Q  71 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactg 170  Q
    ||||||||||||||| |||||||| || ||| |||| || |||||||||||||||||||||||| |||||||||||||| ||||||||||  |||||||     
T  31430529 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcttgtgaactcaaaattatcataaaaagactctaaaaatagcaaatgacta 31430628  T
Q  171 actgtcatca 180  Q
    ||||||||||    
T  31430629 actgtcatca 31430638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 105 - 180
Target Start/End: Complemental strand, 5665905 - 5665830
Alignment:
Q  105 tgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||||||||||||    
T  5665905 tgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatagcgaatgattgactgtcatca 5665830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 99 - 180
Target Start/End: Complemental strand, 43722985 - 43722904
Alignment:
Q  99 ttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||  |||||| ||||||||||||    
T  43722985 ttttcttgctgcttaatcttgcttgtgaactcaaaaatatcataaaaagactctaaaaataacgaatgattgactgtcatca 43722904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 92 - 180
Target Start/End: Original strand, 13972725 - 13972813
Alignment:
Q  92 ttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||||| |||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||  |||||| ||||||||||||    
T  13972725 ttcttgcttttcttgctgcttaatcttgtttgtgaactcaaaaatatcataaaaagactctaaaaataacgaatgattgactgtcatca 13972813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 99 - 180
Target Start/End: Complemental strand, 5105032 - 5104953
Alignment:
Q  99 ttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||  ||||||||||||||||||||||    
T  5105032 ttttcttgctgcttaatcttgcttgtgaactcaaaaatatcataaaaaaactctaaaa--agtgaatgactgactgtcatca 5104953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 89 - 178
Target Start/End: Complemental strand, 13136853 - 13136764
Alignment:
Q  89 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcat 178  Q
    ||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||| ||| |||||||||   ||||||||||||||||    
T  13136853 tttttcttgcttttcttgctgcttaatcttgtttgtgaactcaaaaatatcataaaatgactctaaaaataacaaatgactgactgtcat 13136764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 71 - 177
Target Start/End: Original strand, 36985626 - 36985732
Alignment:
Q  71 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgact 169  Q
    |||||||||||||||||||||||  || ||| |||| || |||||||||||||||||||| |||| ||||| |||| |||||||||||||  ||||||||    
T  36985626 tttcttcaaaatcttctattttttctgctttccttgttgtttaagcttgcttgtgaactc-aaaacatcatgaaaatgacactaaaaataacgaatgact 36985724  T
Q  170 gactgtca 177  Q
    ||||||||    
T  36985725 gactgtca 36985732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 99 - 180
Target Start/End: Complemental strand, 6826055 - 6825974
Alignment:
Q  99 ttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||||  |||| |||  |||||| ||||||||||||    
T  6826055 ttttcttgatgcttaatcttgcttgtgaactcaaaaatatcataaaaagactttaaatataacgaatgattgactgtcatca 6825974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 52 - 180
Target Start/End: Complemental strand, 29439723 - 29439597
Alignment:
Q  52 aatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagaca 150  Q
    ||||||||||| ||||| |||||||| ||||||||| ||||||||| |||  |||||| |||| |||||||||||||||   || ||||| |||| ||||    
T  29439723 aatcgtgacacgattttgctttcttcgaaatcttctttttttcttgttttctttgctgtttaaacttgcttgtgaactc---aacatcatgaaaatgaca 29439627  T
Q  151 ctaaaaatagtgaatgactgactgtcatca 180  Q
    |||||| ||  ||||||| |||||||||||    
T  29439626 ctaaaattaacgaatgacggactgtcatca 29439597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 71 - 180
Target Start/End: Complemental strand, 45453160 - 45453051
Alignment:
Q  71 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgact 169  Q
    ||||||||||||||| |||||||| || ||| |||| || |||||||||||||||||||| |||| ||||| |||| ||| |||||||||  ||||||||    
T  45453160 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcttgtgaactc-aaaacatcatgaaaatgaccctaaaaataaagaatgact 45453062  T
Q  170 gactgtcatca 180  Q
    || ||||||||    
T  45453061 gattgtcatca 45453051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 71 - 145
Target Start/End: Original strand, 31428340 - 31428414
Alignment:
Q  71 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaa 145  Q
    ||||||||||||||| |||||||| || ||| |||| || |||| ||||||||||||||||||| ||||||||||    
T  31428340 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaaacttgcttgtgaactcaaaattatcataaaa 31428414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 71 - 180
Target Start/End: Complemental strand, 45456409 - 45456300
Alignment:
Q  71 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgact 169  Q
    ||||||||||||||| |||||||| || |||  ||| || |||||||||||||||||||| |||| ||||| |||| |||||||||||||  ||||| ||    
T  45456409 tttcttcaaaatcttgtatttttcatgctttctttgttgtttaagcttgcttgtgaactc-aaaacatcatgaaaatgacactaaaaataaagaatggct 45456311  T
Q  170 gactgtcatca 180  Q
    || ||||||||    
T  45456310 gattgtcatca 45456300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 9189532 - 9189572
Alignment:
Q  140 ataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||||||||| |||||||||| |||||||||||||||||||    
T  9189532 ataaaaagactctaaaaatagcgaatgactgactgtcatca 9189572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 37280556 - 37280596
Alignment:
Q  140 ataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||||||||| |||||||||| |||||||||||||||||||    
T  37280556 ataaaaagactctaaaaatagcgaatgactgactgtcatca 37280596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 43208769 - 43208809
Alignment:
Q  140 ataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||||||||| |||||||||| |||||||||||||||||||    
T  43208769 ataaaaagactctaaaaatagcgaatgactgactgtcatca 43208809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 180
Target Start/End: Original strand, 31586785 - 31586823
Alignment:
Q  142 aaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||||||| |||||||||| |||||||||||||||||||    
T  31586785 aaaaagactctaaaaatagcgaatgactgactgtcatca 31586823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 152 - 180
Target Start/End: Original strand, 1504290 - 1504318
Alignment:
Q  152 taaaaatagtgaatgactgactgtcatca 180  Q
    |||||||||||||||||||||||||||||    
T  1504290 taaaaatagtgaatgactgactgtcatca 1504318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 152 - 180
Target Start/End: Original strand, 1507492 - 1507520
Alignment:
Q  152 taaaaatagtgaatgactgactgtcatca 180  Q
    |||||||||||||||||||||||||||||    
T  1507492 taaaaatagtgaatgactgactgtcatca 1507520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 180
Target Start/End: Complemental strand, 8887882 - 8887842
Alignment:
Q  140 ataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||||||||| |||||||||| ||||||| |||||||||||    
T  8887882 ataaaaagactctaaaaatagcgaatgacggactgtcatca 8887842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 25957323 - 25957363
Alignment:
Q  140 ataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||||||||| |||||||||| ||||||| |||||||||||    
T  25957323 ataaaaagactctaaaaatagcgaatgacggactgtcatca 25957363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 180
Target Start/End: Complemental strand, 40780698 - 40780658
Alignment:
Q  140 ataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||||||||| |||||||||| |||||| ||||||||||||    
T  40780698 ataaaaagactctaaaaatagcgaatgattgactgtcatca 40780658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 61 - 180
Target Start/End: Complemental strand, 197361 - 197242
Alignment:
Q  61 acaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatag 160  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||      
T  197361 acaattttactttcttcaaaatcttctatttttcttgcttttcttgctgcttatgcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgt 197262  T
Q  161 tgaatgactgactgtcatca 180  Q
     ||||||| |||||||||||    
T  197261 ggaatgacagactgtcatca 197242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 85; Significance: 2e-40; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 64 - 180
Target Start/End: Original strand, 246234 - 246350
Alignment:
Q  64 attttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtga 163  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||    
T  246234 attttgctttcttcaaaatcttctatttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgtgga 246333  T
Q  164 atgactgactgtcatca 180  Q
    ||||| ||| |||||||    
T  246334 atgacagaccgtcatca 246350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 19 - 169
Target Start/End: Complemental strand, 291124 - 290974
Alignment:
Q  19 atcctgtactccaaatcgtgatacattttcaacaatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagctt 118  Q
    ||||||| ||||||||||||| || ||||||||||||||||||||| ||| ||||| |||||||||||||||||||||| |||  ||| || |||| |||    
T  291124 atcctgtgctccaaatcgtgacacgttttcaacaatcgtgacacaaatttgctttcctcaaaatcttctatttttcttgttttctttgttgtttaaactt 291025  T
Q  119 gcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgact 169  Q
    |||||||||||  |||||||||| |||| |||||||||||||||||||||||    
T  291024 gcttgtgaact-taaaatatcatgaaaatgacactaaaaatagtgaatgact 290974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0757 (Bit Score: 84; Significance: 7e-40; HSPs: 1)
Name: scaffold0757
Description:

Target: scaffold0757; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 89 - 180
Target Start/End: Complemental strand, 4654 - 4563
Alignment:
Q  89 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  4654 tttttcttgattttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatagtgaatgactgactgtcatca 4563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 30 - 180
Target Start/End: Complemental strand, 61747 - 61597
Alignment:
Q  30 caaatcgtgatacattttcaacaatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaact 129  Q
    |||||||||| || ||||| ||||||||||||| ||||| ||||||| |||||||||||||| ||||| |||  ||| || |||||||||||||||||||    
T  61747 caaatcgtgacacgttttcgacaatcgtgacacgattttgctttctttaaaatcttctatttctcttgatttctttgttgtttaagcttgcttgtgaact 61648  T
Q  130 caaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    | |||||||||| |||| ||||||||||| ||||||||||||||||||||||    
T  61647 c-aaaatatcatgaaaatgacactaaaaacagtgaatgactgactgtcatca 61597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 72; Significance: 1e-32; HSPs: 3)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 89 - 180
Target Start/End: Original strand, 969 - 1060
Alignment:
Q  89 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || |||||| ||| |||||||||||||||||||    
T  969 tttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaatactctaaaagtagcgaatgactgactgtcatca 1060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 89 - 180
Target Start/End: Original strand, 4329 - 4420
Alignment:
Q  89 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||| |||||    
T  4329 tttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaagtagcgaatgactgactgacatca 4420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 89 - 180
Target Start/End: Original strand, 11459 - 11550
Alignment:
Q  89 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||| |||||    
T  11459 tttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaagtagcgaatgactgactgacatca 11550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 17 - 157
Target Start/End: Complemental strand, 26408 - 26277
Alignment:
Q  17 tcatcctgtactccaaatcgtgatacattttcaacaatcgtgacacaattttactttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 116  Q
    ||||||||| || |||||||||| || ||||||||||||||||||| ||||| |||||||||||||||||||||         |||| ||||||||| |     
T  26408 tcatcctgtgcttcaaatcgtgacacgttttcaacaatcgtgacacgattttgctttcttcaaaatcttctatt---------tttcatgctgcttatgt 26318  T
Q  117 ttgcttgtgaactcaaaaatatcataaaaagacactaaaaa 157  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  26317 ttgcttgtgaactcaaaaatatcataaaaagactctaaaaa 26277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 89 - 180
Target Start/End: Original strand, 6462 - 6554
Alignment:
Q  89 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||||||| |||||||| ||||||||||||| |||||||||||||||||||| |||||||| |||||||||| |||||||||||||||||||    
T  6462 tttttcttgcttttcttgttgcttaagcttgcctgtgaactcaaaaatatcataaaaaagactctaaaaatagcgaatgactgactgtcatca 6554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 4790 - 4880
Alignment:
Q  90 ttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    |||||||  |||| ||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||    
T  4790 ttttctttctttttttgctgcttaatcttgtttgtgaactcaaaaatatcataaaaagactctaaaaataacgaatgactgactgtcatca 4880  T

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Target: scaffold0334 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 56 - 180
Target Start/End: Complemental strand, 18588 - 18463
Alignment:
Q  56 gtgacacaattttactttcttcaaaa-tcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacacta 153  Q
    |||||||  |||| |||||||||||| |||||||||||||||| |||  ||| || |||||||||| ||||||||| |||||||||| |||| |||||||    
T  18588 gtgacacgtttttgctttcttcaaaaatcttctatttttcttgttttctttgttgtttaagcttgcatgtgaactc-aaaatatcatgaaaatgacacta 18490  T
Q  154 aaaatagtgaatgactgactgtcatca 180  Q
    |||| ||||||||||||||||||||||    
T  18489 aaaacagtgaatgactgactgtcatca 18463  T

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Target: scaffold0045 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 74 - 180
Target Start/End: Complemental strand, 89071 - 88965
Alignment:
Q  74 cttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgac 172  Q
    ||||||||||||||||||||| || ||| |||| || |||||||||||||||||||| |||| ||||| |||| |||||||||||||  |||||||||||    
T  89071 cttcaaaatcttctatttttcatgctttccttgttgtttaagcttgcttgtgaactc-aaaacatcatgaaaatgacactaaaaataacgaatgactgac 88973  T
Q  173 tgtcatca 180  Q
    ||||||||    
T  88972 tgtcatca 88965  T

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Target: scaffold1993 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold1993
Description:

Target: scaffold1993; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 89 - 180
Target Start/End: Complemental strand, 1136 - 1045
Alignment:
Q  89 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtg-aatgactgactgtcatca 180  Q
    ||||||||| |||||||| ||||||||||| ||| ||||||| |||||||||||||||||| |||||||| ||| ||||||||||||||||||    
T  1136 tttttcttgcttttcttggtgcttaagcttccttatgaactccaaaatatcataaaaagactctaaaaat-gtgaaatgactgactgtcatca 1045  T

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Target: scaffold1684 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold1684
Description:

Target: scaffold1684; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 75 - 180
Target Start/End: Original strand, 369 - 474
Alignment:
Q  75 ttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgact 173  Q
    ||||||||||| |||||||| ||  || |||| || |||||||||||||||||||| |||| ||||| |||| |||||||||||||  ||||||||||||    
T  369 ttcaaaatcttgtatttttcatgcgttccttgttgtttaagcttgcttgtgaactc-aaaacatcatgaaaatgacactaaaaataaagaatgactgact 467  T
Q  174 gtcatca 180  Q
     ||||||    
T  468 ttcatca 474  T

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Target: scaffold0567 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0567
Description:

Target: scaffold0567; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 141 - 180
Target Start/End: Original strand, 7016 - 7055
Alignment:
Q  141 taaaaagacactaaaaatagtgaatgactgactgtcatca 180  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  7016 taaaaagactctaaaaatagtgaatgactgactgtcatca 7055  T

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