View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17746_high_3 (Length: 273)
Name: NF17746_high_3
Description: NF17746
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17746_high_3 |
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Alignment Details
Target: chr7 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 20 - 258
Target Start/End: Original strand, 44543028 - 44543266
Alignment:
| Q |
20 |
ctttgtcaattgaagcaaagccaagagatgaagtttatttattatcttacaaatataatagaaggagtgatatcatgcatgcagagtgagacagaatcgg |
119 |
Q |
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| T |
44543028 |
ctttgtcaattgaagcaaagccaagagatgaagtttatttattatcttacaaatataatagaaggagtgatatcatgcatgcagagtgagacagaatcgg |
44543127 |
T |
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| Q |
120 |
gcttcttcgttttgttcggattcatcacttggaaccttcaccagcttcccacatgttaagaatgggagacacgtgtttgaatattgcccatcatttgttc |
219 |
Q |
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| T |
44543128 |
gcttcttcgttttgttcggattcatcacttggaaccttcaccagcttcccacatgttaagaatgggagacacgtgtttgaatattgcccatgatttgttc |
44543227 |
T |
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| Q |
220 |
ttgttaactcaccgcaattttagttcaagcaaaatactt |
258 |
Q |
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| T |
44543228 |
ttgttaactcaccgcaattttagttcaagcaaaatactt |
44543266 |
T |
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