View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17746_low_12 (Length: 235)
Name: NF17746_low_12
Description: NF17746
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17746_low_12 |
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Alignment Details
Target: chr1 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 2 - 231
Target Start/End: Complemental strand, 37434883 - 37434654
Alignment:
| Q |
2 |
atcgaactcaacagagccacaatcgctacttcaaactccgaactcttcactctggcacaaacccacatcatttacgaagatgaatatcttctcgtagtta |
101 |
Q |
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| T |
37434883 |
atcgaactcaacagagccacaatcgctacttcaaactccgaactcttctctctggcacaaacccacatcatttacgaagatgaatatcttctcgcagtta |
37434784 |
T |
|
| Q |
102 |
acaaaccgcaaggaatctactgcgacaatgtcctcacctcgcttcaatcacaaagcaccgttggatcagagcttcatctcgcgaatcgactcgatcggga |
201 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37434783 |
acaaaccgcaaggaatctactgcgacaatgtcctcacctcgcttcaatcacaaagcaccgttggatcagagcttcatctcgcgaatcgactcgatcggga |
37434684 |
T |
|
| Q |
202 |
tacgagtggtgtaatgcttataacgaagtc |
231 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
37434683 |
tacgagtggtgtaatgcttataacgaagtc |
37434654 |
T |
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