View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17746_low_8 (Length: 250)
Name: NF17746_low_8
Description: NF17746
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17746_low_8 |
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Alignment Details
Target: chr5 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 10 - 228
Target Start/End: Original strand, 37925745 - 37925964
Alignment:
| Q |
10 |
acatcatcaactacaccct-acaagcaaggtcgagactctagattctagaatatgtgcaccacccagactaggatagtacatccttcaagaactacaagt |
108 |
Q |
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| T |
37925745 |
acatcatcaactacacccttacaagcaaggtcgagactctagattctagaatatgtgcaccacccagactaggatagtacatccttcaagaactacaagt |
37925844 |
T |
|
| Q |
109 |
aagacctgcagtgaattagtaaatcaatcatagcaccaaatgattttattaaatacattgatcatatgtacaaagtagtgattcaatactatgaggagat |
208 |
Q |
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||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
37925845 |
aagacctacagtgaattagtaaatcaatcatagcaccaaatgattttattaaatacattgatcatatgtacaaagtagtgattcaatactatgaagagat |
37925944 |
T |
|
| Q |
209 |
gacatgatggcaatgacctc |
228 |
Q |
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|||||||||||||||||||| |
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| T |
37925945 |
gacatgatggcaatgacctc |
37925964 |
T |
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