View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17747_low_9 (Length: 249)

Name: NF17747_low_9
Description: NF17747
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17747_low_9
NF17747_low_9
[»] chr4 (59 HSPs)
chr4 (35-249)||(8846639-8846854)
chr4 (56-249)||(15099615-15099808)
chr4 (35-249)||(12774264-12774477)
chr4 (35-249)||(39705930-39706143)
chr4 (12-216)||(44928542-44928746)
chr4 (56-249)||(15190582-15190775)
chr4 (11-131)||(16597028-16597148)
chr4 (11-249)||(22633831-22634068)
chr4 (11-249)||(24029007-24029244)
chr4 (11-128)||(14052932-14053048)
chr4 (11-140)||(15091271-15091400)
chr4 (11-140)||(22636808-22636937)
chr4 (12-140)||(14039023-14039151)
chr4 (11-131)||(15552196-15552316)
chr4 (11-134)||(16239610-16239734)
chr4 (11-249)||(13812427-13812664)
chr4 (11-249)||(20156908-20157145)
chr4 (11-133)||(44053210-44053332)
chr4 (35-140)||(6190807-6190912)
chr4 (11-140)||(7799071-7799200)
chr4 (11-128)||(12903132-12903248)
chr4 (55-226)||(15464591-15464762)
chr4 (35-218)||(44102506-44102688)
chr4 (14-128)||(7089252-7089366)
chr4 (55-216)||(52242855-52243016)
chr4 (56-186)||(43198251-43198381)
chr4 (11-128)||(3097018-3097135)
chr4 (35-187)||(16377164-16377316)
chr4 (35-201)||(13844852-13845018)
chr4 (26-122)||(17047717-17047813)
chr4 (35-127)||(21814945-21815037)
chr4 (35-127)||(21818367-21818459)
chr4 (163-249)||(3332151-3332237)
chr4 (56-126)||(15868298-15868368)
chr4 (35-199)||(21815274-21815437)
chr4 (25-126)||(13405-13506)
chr4 (54-122)||(17333749-17333817)
chr4 (26-97)||(16356587-16356658)
chr4 (65-103)||(17046727-17046765)
chr4 (56-126)||(32851839-32851909)
chr4 (11-96)||(44676047-44676132)
chr4 (54-98)||(152561-152605)
chr4 (11-75)||(13569948-13570012)
chr4 (54-98)||(15792267-15792311)
chr4 (54-98)||(26789830-26789874)
chr4 (26-97)||(15094187-15094258)
chr4 (54-129)||(53081758-53081833)
chr4 (158-199)||(12903071-12903112)
chr4 (26-75)||(16348326-16348375)
chr4 (11-96)||(23843894-23843979)
chr4 (162-202)||(287402-287442)
chr4 (27-71)||(3413212-3413256)
chr4 (11-75)||(12570457-12570521)
chr4 (54-122)||(16043481-16043549)
chr4 (162-202)||(16359815-16359855)
chr4 (163-199)||(21815072-21815108)
chr4 (163-199)||(21818494-21818530)
chr4 (162-202)||(31116821-31116861)
chr4 (162-202)||(55502516-55502556)
[»] chr5 (59 HSPs)
chr5 (35-249)||(21565809-21566023)
chr5 (35-239)||(22959175-22959379)
chr5 (35-249)||(19669164-19669379)
chr5 (56-249)||(5888838-5889031)
chr5 (35-249)||(21329137-21329351)
chr5 (12-249)||(21871190-21871426)
chr5 (12-249)||(21875470-21875706)
chr5 (8-134)||(21985762-21985888)
chr5 (11-249)||(22119811-22120048)
chr5 (11-199)||(1096782-1096970)
chr5 (11-134)||(9078332-9078455)
chr5 (12-186)||(23390115-23390290)
chr5 (11-131)||(19660455-19660575)
chr5 (64-249)||(21741214-21741399)
chr5 (11-140)||(24529595-24529724)
chr5 (35-216)||(36154470-36154651)
chr5 (35-199)||(11580887-11581051)
chr5 (11-134)||(24493948-24494071)
chr5 (12-134)||(13095874-13095996)
chr5 (11-128)||(8286471-8286588)
chr5 (55-216)||(22144348-22144509)
chr5 (11-134)||(25421912-25422035)
chr5 (11-128)||(22075394-22075511)
chr5 (11-134)||(25431774-25431897)
chr5 (12-134)||(13025690-13025812)
chr5 (34-128)||(21292622-21292716)
chr5 (11-125)||(22107002-22107116)
chr5 (11-249)||(24766955-24767192)
chr5 (54-246)||(26011695-26011886)
chr5 (59-128)||(21498683-21498752)
chr5 (12-96)||(37724319-37724403)
chr5 (12-75)||(31342539-31342602)
chr5 (54-122)||(20026524-20026592)
chr5 (57-125)||(22177807-22177875)
chr5 (26-96)||(22032731-22032801)
chr5 (11-96)||(23201784-23201869)
chr5 (11-83)||(14079576-14079648)
chr5 (54-122)||(15796889-15796957)
chr5 (157-249)||(21501918-21502008)
chr5 (11-71)||(26742376-26742436)
chr5 (26-97)||(21366300-21366371)
chr5 (55-122)||(25744190-25744257)
chr5 (26-96)||(18769638-18769708)
chr5 (163-200)||(25744035-25744072)
chr5 (162-202)||(4398019-4398059)
chr5 (162-202)||(16255703-16255743)
chr5 (162-202)||(16259336-16259376)
chr5 (35-75)||(17918805-17918845)
chr5 (11-71)||(20910430-20910490)
chr5 (162-202)||(22589500-22589540)
chr5 (162-202)||(22593055-22593095)
chr5 (162-202)||(22596610-22596650)
chr5 (162-202)||(22880519-22880559)
chr5 (162-202)||(23693769-23693809)
chr5 (162-202)||(26360853-26360893)
chr5 (54-98)||(26732419-26732463)
chr5 (54-98)||(26740232-26740276)
chr5 (162-202)||(43121474-43121514)
chr5 (162-202)||(43125007-43125047)
[»] scaffold0556 (2 HSPs)
scaffold0556 (35-249)||(7076-7290)
scaffold0556 (64-199)||(8331-8466)
[»] chr7 (64 HSPs)
chr7 (35-249)||(44014439-44014653)
chr7 (35-248)||(810771-810984)
chr7 (35-249)||(68011-68225)
chr7 (12-134)||(38227860-38227982)
chr7 (35-246)||(9389337-9389548)
chr7 (11-140)||(9509563-9509692)
chr7 (35-216)||(17061602-17061783)
chr7 (35-247)||(47832076-47832287)
chr7 (56-199)||(15143700-15143843)
chr7 (11-249)||(39267264-39267501)
chr7 (11-133)||(12699213-12699335)
chr7 (35-249)||(16219358-16219571)
chr7 (11-128)||(16385876-16385993)
chr7 (11-131)||(28504919-28505039)
chr7 (11-249)||(9751168-9751405)
chr7 (11-249)||(2831924-2832160)
chr7 (11-129)||(15754505-15754623)
chr7 (11-140)||(3563982-3564111)
chr7 (64-249)||(22073182-22073366)
chr7 (55-216)||(12255453-12255614)
chr7 (11-128)||(27847462-27847579)
chr7 (11-128)||(40443763-40443880)
chr7 (54-245)||(16056598-16056788)
chr7 (35-199)||(12756359-12756522)
chr7 (11-131)||(34201166-34201286)
chr7 (11-128)||(26212371-26212488)
chr7 (11-103)||(11995676-11995768)
chr7 (11-131)||(18302561-18302681)
chr7 (35-199)||(44116820-44116983)
chr7 (64-249)||(16324272-16324456)
chr7 (35-249)||(18005913-18006120)
chr7 (55-216)||(2279780-2279941)
chr7 (11-187)||(21064780-21064956)
chr7 (57-126)||(14045212-14045281)
chr7 (57-126)||(14355242-14355311)
chr7 (57-126)||(1867650-1867719)
chr7 (56-125)||(2529640-2529709)
chr7 (11-96)||(10508701-10508786)
chr7 (11-96)||(24054884-24054969)
chr7 (54-122)||(17017052-17017120)
chr7 (57-124)||(14036664-14036731)
chr7 (57-124)||(14346694-14346761)
chr7 (26-97)||(17137697-17137768)
chr7 (11-78)||(19649103-19649170)
chr7 (35-97)||(2760542-2760604)
chr7 (35-97)||(3272202-3272264)
chr7 (11-96)||(11880668-11880753)
chr7 (54-122)||(9177250-9177318)
chr7 (11-75)||(9703703-9703767)
chr7 (54-122)||(16092185-16092253)
chr7 (67-126)||(12901793-12901852)
chr7 (26-96)||(12187429-12187499)
chr7 (54-91)||(9032929-9032966)
chr7 (26-71)||(12318543-12318588)
chr7 (26-71)||(15581108-15581153)
chr7 (208-249)||(15754702-15754743)
chr7 (163-200)||(34201098-34201135)
chr7 (162-202)||(123960-124000)
chr7 (162-202)||(4993798-4993838)
chr7 (162-202)||(13395232-13395272)
chr7 (27-71)||(13462177-13462221)
chr7 (54-126)||(15008105-15008177)
chr7 (11-71)||(17701275-17701335)
chr7 (162-202)||(48785625-48785665)
[»] chr1 (61 HSPs)
chr1 (35-246)||(33681277-33681488)
chr1 (35-249)||(20248542-20248756)
chr1 (35-249)||(22237895-22238108)
chr1 (35-249)||(52927623-52927836)
chr1 (35-249)||(22921509-22921723)
chr1 (59-249)||(35981352-35981542)
chr1 (34-199)||(21754351-21754515)
chr1 (12-199)||(433322-433509)
chr1 (64-249)||(20637115-20637300)
chr1 (11-125)||(21162117-21162231)
chr1 (11-134)||(50209832-50209954)
chr1 (59-249)||(28194114-28194304)
chr1 (11-140)||(22532643-22532772)
chr1 (11-140)||(34510154-34510283)
chr1 (11-128)||(20846848-20846965)
chr1 (11-247)||(20918870-20919104)
chr1 (11-140)||(22354190-22354319)
chr1 (35-128)||(22355827-22355920)
chr1 (35-128)||(22357513-22357606)
chr1 (11-128)||(27250358-27250475)
chr1 (11-128)||(38801020-38801137)
chr1 (11-131)||(20135570-20135690)
chr1 (11-128)||(21027055-21027172)
chr1 (12-100)||(21301157-21301245)
chr1 (165-249)||(49261606-49261690)
chr1 (54-129)||(16367871-16367946)
chr1 (35-161)||(43697713-43697839)
chr1 (11-99)||(20091092-20091180)
chr1 (55-129)||(16093478-16093552)
chr1 (56-136)||(21342526-21342606)
chr1 (56-136)||(21347391-21347471)
chr1 (54-126)||(21895893-21895965)
chr1 (8-96)||(22468312-22468400)
chr1 (54-122)||(27652806-27652874)
chr1 (34-97)||(18181763-18181826)
chr1 (163-226)||(26065228-26065291)
chr1 (54-125)||(35260716-35260787)
chr1 (55-122)||(48521036-48521103)
chr1 (55-126)||(50687056-50687127)
chr1 (54-126)||(21533479-21533552)
chr1 (11-96)||(42864830-42864915)
chr1 (54-126)||(21861155-21861227)
chr1 (54-126)||(26065382-26065454)
chr1 (55-122)||(16381632-16381699)
chr1 (26-97)||(22831012-22831083)
chr1 (59-122)||(50613706-50613769)
chr1 (59-122)||(50621534-50621597)
chr1 (26-96)||(21787676-21787746)
chr1 (35-97)||(22432426-22432488)
chr1 (56-126)||(41049631-41049701)
chr1 (56-125)||(16759115-16759184)
chr1 (26-71)||(20228454-20228499)
chr1 (162-202)||(14432122-14432162)
chr1 (162-202)||(20631628-20631668)
chr1 (54-98)||(21683490-21683534)
chr1 (162-202)||(22900021-22900061)
chr1 (162-202)||(24087727-24087767)
chr1 (162-202)||(36181887-36181927)
chr1 (162-202)||(37358780-37358820)
chr1 (162-202)||(45307602-45307642)
chr1 (54-98)||(52940462-52940506)
[»] chr6 (62 HSPs)
chr6 (35-249)||(19652460-19652674)
chr6 (11-249)||(4667831-4668068)
chr6 (11-249)||(4674678-4674915)
chr6 (11-249)||(4189222-4189459)
chr6 (11-249)||(4185441-4185678)
chr6 (35-249)||(27332926-27333139)
chr6 (35-249)||(27393666-27393879)
chr6 (11-132)||(31155016-31155137)
chr6 (11-249)||(29808501-29808739)
chr6 (11-140)||(22779845-22779974)
chr6 (11-140)||(17287414-17287543)
chr6 (11-249)||(28496091-28496328)
chr6 (11-134)||(19303159-19303282)
chr6 (56-247)||(23019675-23019865)
chr6 (11-129)||(1561688-1561806)
chr6 (11-134)||(18409445-18409568)
chr6 (12-128)||(16920263-16920379)
chr6 (14-128)||(20637915-20638029)
chr6 (39-199)||(29060855-29061015)
chr6 (11-249)||(21939649-21939886)
chr6 (31-128)||(20360609-20360706)
chr6 (35-127)||(18457101-18457193)
chr6 (17-131)||(25611347-25611461)
chr6 (35-128)||(18821472-18821565)
chr6 (11-140)||(20594147-20594276)
chr6 (56-201)||(22080400-22080545)
chr6 (35-199)||(25628997-25629161)
chr6 (12-131)||(15894049-15894168)
chr6 (11-128)||(22831877-22831994)
chr6 (11-129)||(22334500-22334618)
chr6 (11-131)||(25603003-25603123)
chr6 (11-128)||(11185877-11185994)
chr6 (11-83)||(22439230-22439302)
chr6 (35-201)||(25956263-25956429)
chr6 (11-96)||(22432667-22432752)
chr6 (54-122)||(17106180-17106248)
chr6 (35-199)||(25644637-25644801)
chr6 (54-118)||(33443517-33443581)
chr6 (26-97)||(21834524-21834595)
chr6 (55-125)||(19023838-19023908)
chr6 (163-249)||(19668639-19668724)
chr6 (54-124)||(20109605-20109675)
chr6 (11-96)||(19863395-19863480)
chr6 (11-96)||(25641802-25641887)
chr6 (158-202)||(16830108-16830152)
chr6 (54-122)||(23539386-23539454)
chr6 (26-97)||(21739656-21739727)
chr6 (54-100)||(18199019-18199065)
chr6 (64-98)||(18696979-18697013)
chr6 (26-75)||(22429675-22429724)
chr6 (208-249)||(27325248-27325289)
chr6 (162-202)||(12596269-12596309)
chr6 (162-202)||(16102655-16102695)
chr6 (162-202)||(16813088-16813128)
chr6 (54-98)||(18204572-18204616)
chr6 (54-122)||(20224412-20224480)
chr6 (54-122)||(22118396-22118464)
chr6 (54-98)||(23527711-23527755)
chr6 (11-71)||(25766798-25766858)
chr6 (11-71)||(27415572-27415632)
chr6 (162-202)||(29493065-29493105)
chr6 (54-122)||(35008618-35008686)
[»] scaffold0475 (1 HSPs)
scaffold0475 (11-249)||(9342-9579)
[»] chr8 (71 HSPs)
chr8 (35-249)||(26355340-26355554)
chr8 (35-249)||(21673970-21674184)
chr8 (56-246)||(39834100-39834290)
chr8 (11-216)||(41598482-41598687)
chr8 (11-140)||(18878855-18878984)
chr8 (11-199)||(23406695-23406884)
chr8 (11-140)||(20536582-20536711)
chr8 (11-140)||(22627109-22627238)
chr8 (11-131)||(5865895-5866015)
chr8 (11-131)||(17141296-17141416)
chr8 (35-249)||(38854893-38855106)
chr8 (12-140)||(6759631-6759759)
chr8 (11-131)||(21491375-21491495)
chr8 (11-133)||(18818028-18818150)
chr8 (12-134)||(28648663-28648785)
chr8 (11-184)||(19801045-19801218)
chr8 (11-128)||(31971630-31971747)
chr8 (11-134)||(16091959-16092082)
chr8 (35-140)||(7373123-7373228)
chr8 (11-128)||(45130649-45130766)
chr8 (11-131)||(21255602-21255722)
chr8 (11-134)||(21923546-21923669)
chr8 (12-131)||(23648936-23649055)
chr8 (11-131)||(21249764-21249884)
chr8 (11-199)||(22875380-22875568)
chr8 (11-124)||(16199276-16199389)
chr8 (11-129)||(21918628-21918746)
chr8 (35-249)||(23760482-23760695)
chr8 (26-128)||(25362784-25362886)
chr8 (35-245)||(6520638-6520847)
chr8 (11-96)||(21389071-21389156)
chr8 (54-125)||(37116813-37116884)
chr8 (54-124)||(17266577-17266647)
chr8 (35-125)||(20499049-20499139)
chr8 (54-126)||(24353488-24353560)
chr8 (56-122)||(21414890-21414956)
chr8 (54-124)||(40492436-40492506)
chr8 (54-126)||(2418460-2418532)
chr8 (54-126)||(17439090-17439162)
chr8 (54-122)||(22996313-22996381)
chr8 (26-97)||(22010313-22010384)
chr8 (56-126)||(13507672-13507742)
chr8 (56-126)||(13597204-13597274)
chr8 (26-96)||(19899510-19899580)
chr8 (26-75)||(377714-377763)
chr8 (11-96)||(17353556-17353641)
chr8 (26-75)||(20465673-20465722)
chr8 (136-249)||(21285864-21285976)
chr8 (54-95)||(37116085-37116126)
chr8 (54-122)||(16799958-16800026)
chr8 (11-75)||(24756157-24756221)
chr8 (54-125)||(982987-983058)
chr8 (26-97)||(15602651-15602722)
chr8 (26-97)||(15611103-15611174)
chr8 (54-125)||(22365128-22365199)
chr8 (26-97)||(30642925-30642996)
chr8 (35-97)||(16409898-16409960)
chr8 (35-97)||(16860980-16861042)
chr8 (56-122)||(19154472-19154538)
chr8 (163-245)||(21491263-21491344)
chr8 (26-75)||(23776467-23776517)
chr8 (11-128)||(23834532-23834649)
chr8 (26-71)||(22028973-22029018)
chr8 (54-98)||(17085760-17085804)
chr8 (162-202)||(17615229-17615269)
chr8 (27-71)||(18619894-18619938)
chr8 (40-96)||(21395630-21395686)
chr8 (40-96)||(21790123-21790179)
chr8 (162-202)||(22059158-22059198)
chr8 (162-202)||(22145155-22145195)
chr8 (162-202)||(24707576-24707616)
[»] chr3 (80 HSPs)
chr3 (35-249)||(16097595-16097809)
chr3 (35-249)||(12933952-12934166)
chr3 (35-249)||(32307934-32308147)
chr3 (37-249)||(9513174-9513387)
chr3 (37-249)||(9521149-9521362)
chr3 (35-249)||(49667726-49667939)
chr3 (54-247)||(324503-324695)
chr3 (56-249)||(1465072-1465265)
chr3 (11-216)||(17247904-17248109)
chr3 (35-184)||(49389286-49389434)
chr3 (35-247)||(14234758-14234969)
chr3 (11-199)||(40213339-40213527)
chr3 (14-131)||(14572971-14573088)
chr3 (35-249)||(1644325-1644538)
chr3 (11-134)||(11424381-11424504)
chr3 (11-134)||(18438914-18439037)
chr3 (35-249)||(12171759-12171960)
chr3 (35-249)||(15471190-15471403)
chr3 (11-140)||(25476003-25476132)
chr3 (11-140)||(26687261-26687390)
chr3 (11-131)||(14179705-14179825)
chr3 (12-140)||(17488231-17488359)
chr3 (11-249)||(12340018-12340255)
chr3 (11-249)||(13209946-13210183)
chr3 (11-139)||(14973229-14973357)
chr3 (12-140)||(17499713-17499841)
chr3 (35-249)||(16104046-16104259)
chr3 (11-128)||(20698065-20698182)
chr3 (11-249)||(14665871-14666108)
chr3 (11-249)||(14735384-14735621)
chr3 (15-199)||(53070321-53070504)
chr3 (11-131)||(14576451-14576571)
chr3 (11-249)||(14669026-14669263)
chr3 (11-198)||(23082979-23083167)
chr3 (13-245)||(12851984-12852215)
chr3 (11-101)||(12399608-12399698)
chr3 (11-120)||(43842572-43842681)
chr3 (35-131)||(4588457-4588553)
chr3 (63-140)||(13442648-13442725)
chr3 (11-128)||(30030214-30030331)
chr3 (55-185)||(52523389-52523519)
chr3 (15-112)||(17247142-17247239)
chr3 (56-187)||(2050864-2050993)
chr3 (12-128)||(16809775-16809887)
chr3 (54-126)||(45797631-45797703)
chr3 (56-126)||(14501587-14501657)
chr3 (56-122)||(23275133-23275199)
chr3 (56-129)||(605954-606027)
chr3 (11-96)||(15877447-15877532)
chr3 (54-98)||(316612-316656)
chr3 (55-122)||(21837892-21837959)
chr3 (54-125)||(22109936-22110007)
chr3 (56-126)||(12378384-12378454)
chr3 (56-126)||(23412836-23412906)
chr3 (26-75)||(11298163-11298212)
chr3 (30-75)||(26190647-26190692)
chr3 (54-126)||(43927568-43927640)
chr3 (12-75)||(321634-321697)
chr3 (26-97)||(12173199-12173270)
chr3 (26-97)||(12496668-12496739)
chr3 (26-97)||(18383551-18383622)
chr3 (26-97)||(23077112-23077183)
chr3 (26-96)||(856550-856620)
chr3 (158-224)||(14572878-14572944)
chr3 (26-96)||(15060706-15060776)
chr3 (163-249)||(37250936-37251021)
chr3 (208-249)||(4588602-4588643)
chr3 (162-202)||(2034751-2034791)
chr3 (162-202)||(2038258-2038298)
chr3 (162-202)||(2041999-2042039)
chr3 (35-75)||(3389600-3389640)
chr3 (35-75)||(3402609-3402649)
chr3 (54-122)||(9578070-9578138)
chr3 (162-202)||(14038489-14038529)
chr3 (162-202)||(14041957-14041997)
chr3 (162-202)||(15009926-15009966)
chr3 (35-75)||(17674218-17674258)
chr3 (162-202)||(18959206-18959246)
chr3 (54-126)||(37250773-37250845)
chr3 (162-202)||(39231036-39231076)
[»] scaffold0125 (1 HSPs)
scaffold0125 (35-249)||(45431-45646)
[»] scaffold1984 (1 HSPs)
scaffold1984 (35-247)||(397-609)
[»] scaffold0102 (2 HSPs)
scaffold0102 (35-249)||(19531-19745)
scaffold0102 (24-96)||(48092-48164)
[»] scaffold0001 (3 HSPs)
scaffold0001 (35-249)||(160950-161164)
scaffold0001 (54-98)||(446965-447009)
scaffold0001 (54-98)||(497896-497940)
[»] scaffold0138 (2 HSPs)
scaffold0138 (35-246)||(13209-13419)
scaffold0138 (54-98)||(17821-17865)
[»] scaffold0120 (3 HSPs)
scaffold0120 (11-199)||(32577-32765)
scaffold0120 (11-199)||(46240-46428)
scaffold0120 (12-141)||(16460-16588)
[»] scaffold0211 (1 HSPs)
scaffold0211 (35-249)||(28451-28665)
[»] scaffold0150 (1 HSPs)
scaffold0150 (35-249)||(32348-32562)
[»] scaffold0028 (1 HSPs)
scaffold0028 (35-249)||(132918-133132)
[»] scaffold0810 (1 HSPs)
scaffold0810 (35-249)||(3197-3411)
[»] chr2 (37 HSPs)
chr2 (57-249)||(28406244-28406436)
chr2 (35-249)||(22133859-22134071)
chr2 (11-140)||(23660396-23660525)
chr2 (11-134)||(298433-298556)
chr2 (11-140)||(27753949-27754078)
chr2 (12-140)||(22730852-22730980)
chr2 (11-128)||(20309480-20309597)
chr2 (12-199)||(22337430-22337617)
chr2 (12-140)||(22737799-22737927)
chr2 (35-226)||(25176130-25176321)
chr2 (11-118)||(28291920-28292027)
chr2 (14-199)||(23076756-23076940)
chr2 (11-128)||(23654028-23654145)
chr2 (12-128)||(23286236-23286352)
chr2 (35-140)||(32451571-32451676)
chr2 (56-131)||(23071626-23071701)
chr2 (11-128)||(37745-37862)
chr2 (35-216)||(23708261-23708441)
chr2 (54-102)||(39827600-39827648)
chr2 (26-96)||(24658055-24658125)
chr2 (54-124)||(23207744-23207814)
chr2 (11-96)||(22740579-22740664)
chr2 (11-96)||(22758334-22758419)
chr2 (54-98)||(18546549-18546593)
chr2 (166-226)||(20519964-20520024)
chr2 (54-126)||(22412720-22412792)
chr2 (162-202)||(31756229-31756269)
chr2 (26-97)||(25963351-25963422)
chr2 (56-126)||(19672290-19672360)
chr2 (163-249)||(23207545-23207630)
chr2 (27-128)||(27263610-27263711)
chr2 (26-75)||(45677789-45677838)
chr2 (54-122)||(20519777-20519845)
chr2 (163-199)||(22459330-22459366)
chr2 (54-122)||(23005197-23005265)
chr2 (162-202)||(41684530-41684570)
chr2 (162-202)||(44621239-44621279)
[»] scaffold0628 (1 HSPs)
scaffold0628 (35-199)||(2445-2608)
[»] scaffold0010 (4 HSPs)
scaffold0010 (35-249)||(130172-130386)
scaffold0010 (54-122)||(60299-60367)
scaffold0010 (163-226)||(60483-60546)
scaffold0010 (11-128)||(23575-23692)
[»] scaffold0266 (1 HSPs)
scaffold0266 (11-140)||(18576-18705)
[»] scaffold0839 (1 HSPs)
scaffold0839 (11-140)||(1696-1824)
[»] scaffold0021 (4 HSPs)
scaffold0021 (36-161)||(62914-63039)
scaffold0021 (11-140)||(124959-125085)
scaffold0021 (11-76)||(175202-175267)
scaffold0021 (162-202)||(133739-133779)
[»] scaffold1137 (1 HSPs)
scaffold1137 (34-249)||(1942-2157)
[»] scaffold0207 (1 HSPs)
scaffold0207 (35-249)||(2286-2499)
[»] scaffold0075 (2 HSPs)
scaffold0075 (12-249)||(7913-8149)
scaffold0075 (25-126)||(53103-53204)
[»] scaffold0020 (1 HSPs)
scaffold0020 (35-249)||(15472-15686)
[»] scaffold0078 (1 HSPs)
scaffold0078 (56-249)||(10794-10986)
[»] scaffold0026 (4 HSPs)
scaffold0026 (11-140)||(40230-40359)
scaffold0026 (11-140)||(39549-39678)
scaffold0026 (69-131)||(59179-59241)
scaffold0026 (80-140)||(26599-26659)
[»] scaffold0011 (3 HSPs)
scaffold0011 (11-140)||(52286-52415)
scaffold0011 (11-124)||(167608-167721)
scaffold0011 (54-102)||(37738-37786)
[»] scaffold0413 (2 HSPs)
scaffold0413 (11-199)||(15233-15421)
scaffold0413 (25-125)||(13033-13133)
[»] scaffold0023 (2 HSPs)
scaffold0023 (35-195)||(101714-101873)
scaffold0023 (84-245)||(39863-40024)
[»] scaffold0142 (1 HSPs)
scaffold0142 (35-218)||(17076-17259)
[»] scaffold0056 (2 HSPs)
scaffold0056 (11-134)||(16833-16956)
scaffold0056 (11-127)||(78980-79096)
[»] scaffold0647 (1 HSPs)
scaffold0647 (11-133)||(5739-5861)
[»] scaffold0639 (1 HSPs)
scaffold0639 (11-133)||(8856-8978)
[»] scaffold0305 (1 HSPs)
scaffold0305 (11-140)||(20777-20906)
[»] scaffold0292 (2 HSPs)
scaffold0292 (11-140)||(3844-3973)
scaffold0292 (35-140)||(716-821)
[»] scaffold0016 (3 HSPs)
scaffold0016 (12-186)||(2178-2353)
scaffold0016 (33-249)||(207159-207374)
scaffold0016 (56-122)||(119214-119280)
[»] scaffold0261 (4 HSPs)
scaffold0261 (11-131)||(16041-16161)
scaffold0261 (6-96)||(1755-1845)
scaffold0261 (64-126)||(17937-17999)
scaffold0261 (163-247)||(15927-16010)
[»] scaffold0228 (4 HSPs)
scaffold0228 (12-187)||(4834-5010)
scaffold0228 (12-187)||(12416-12592)
scaffold0228 (12-187)||(22368-22544)
scaffold0228 (11-75)||(18262-18326)
[»] scaffold0175 (2 HSPs)
scaffold0175 (11-131)||(34503-34623)
scaffold0175 (12-140)||(13466-13594)
[»] scaffold0395 (2 HSPs)
scaffold0395 (11-126)||(580-695)
scaffold0395 (11-128)||(8110-8227)
[»] scaffold0122 (2 HSPs)
scaffold0122 (12-199)||(25684-25871)
scaffold0122 (11-140)||(33112-33241)
[»] scaffold0100 (1 HSPs)
scaffold0100 (11-134)||(20492-20615)
[»] scaffold0034 (2 HSPs)
scaffold0034 (54-249)||(32802-32996)
scaffold0034 (35-133)||(51526-51624)
[»] scaffold0876 (1 HSPs)
scaffold0876 (11-133)||(2703-2825)
[»] scaffold0333 (2 HSPs)
scaffold0333 (35-249)||(6878-7092)
scaffold0333 (35-249)||(14258-14472)
[»] scaffold0598 (1 HSPs)
scaffold0598 (11-128)||(681-798)
[»] scaffold0221 (1 HSPs)
scaffold0221 (11-131)||(12427-12547)
[»] scaffold0145 (1 HSPs)
scaffold0145 (11-135)||(39138-39262)
[»] scaffold0003 (2 HSPs)
scaffold0003 (11-199)||(339569-339757)
scaffold0003 (11-71)||(71729-71789)
[»] scaffold0627 (1 HSPs)
scaffold0627 (11-134)||(284-407)
[»] scaffold0218 (3 HSPs)
scaffold0218 (12-131)||(28899-29018)
scaffold0218 (163-249)||(7845-7930)
scaffold0218 (54-126)||(7682-7754)
[»] scaffold0217 (1 HSPs)
scaffold0217 (21-140)||(16227-16346)
[»] scaffold0161 (1 HSPs)
scaffold0161 (12-131)||(2064-2183)
[»] scaffold0121 (1 HSPs)
scaffold0121 (14-140)||(8154-8279)
[»] scaffold0718 (1 HSPs)
scaffold0718 (11-128)||(4760-4877)
[»] scaffold0456 (1 HSPs)
scaffold0456 (11-128)||(10055-10172)
[»] scaffold0427 (1 HSPs)
scaffold0427 (11-128)||(13870-13987)
[»] scaffold0352 (1 HSPs)
scaffold0352 (11-140)||(17626-17755)
[»] scaffold0403 (2 HSPs)
scaffold0403 (12-128)||(5223-5339)
scaffold0403 (158-199)||(5162-5203)
[»] scaffold0347 (2 HSPs)
scaffold0347 (11-249)||(294-530)
scaffold0347 (54-97)||(9381-9424)
[»] scaffold0130 (1 HSPs)
scaffold0130 (11-126)||(28924-29039)
[»] scaffold0507 (1 HSPs)
scaffold0507 (56-249)||(7720-7912)
[»] scaffold0358 (2 HSPs)
scaffold0358 (11-128)||(311-428)
scaffold0358 (11-128)||(5087-5204)
[»] scaffold0193 (1 HSPs)
scaffold0193 (11-128)||(13586-13703)
[»] scaffold0114 (3 HSPs)
scaffold0114 (11-128)||(15094-15211)
scaffold0114 (11-85)||(32894-32968)
scaffold0114 (26-96)||(7705-7775)
[»] scaffold0064 (2 HSPs)
scaffold0064 (11-128)||(47361-47478)
scaffold0064 (34-96)||(64305-64367)
[»] scaffold0042 (2 HSPs)
scaffold0042 (12-129)||(23921-24038)
scaffold0042 (11-75)||(34529-34593)
[»] scaffold0192 (1 HSPs)
scaffold0192 (12-247)||(10178-10412)
[»] scaffold0080 (1 HSPs)
scaffold0080 (11-199)||(40227-40414)
[»] scaffold0037 (1 HSPs)
scaffold0037 (11-249)||(79950-80187)
[»] scaffold0621 (1 HSPs)
scaffold0621 (35-249)||(6801-7015)
[»] scaffold0530 (1 HSPs)
scaffold0530 (56-248)||(691-888)
[»] scaffold0389 (1 HSPs)
scaffold0389 (11-125)||(13226-13340)
[»] scaffold0113 (1 HSPs)
scaffold0113 (14-128)||(32439-32553)
[»] scaffold1842 (1 HSPs)
scaffold1842 (11-124)||(678-791)
[»] scaffold0540 (1 HSPs)
scaffold0540 (11-140)||(631-760)
[»] scaffold0070 (1 HSPs)
scaffold0070 (11-140)||(4897-5026)
[»] scaffold0243 (1 HSPs)
scaffold0243 (56-248)||(5785-5976)
[»] scaffold0031 (2 HSPs)
scaffold0031 (11-127)||(20044-20160)
scaffold0031 (11-78)||(65412-65479)
[»] scaffold0351 (1 HSPs)
scaffold0351 (11-125)||(16657-16771)
[»] scaffold0231 (1 HSPs)
scaffold0231 (35-141)||(23255-23361)
[»] scaffold0490 (1 HSPs)
scaffold0490 (11-128)||(2327-2444)
[»] scaffold0116 (2 HSPs)
scaffold0116 (56-201)||(43447-43592)
scaffold0116 (56-201)||(47367-47512)
[»] scaffold0503 (1 HSPs)
scaffold0503 (35-127)||(12315-12407)
[»] scaffold0247 (1 HSPs)
scaffold0247 (14-122)||(6449-6557)
[»] scaffold0088 (1 HSPs)
scaffold0088 (12-128)||(21276-21392)
[»] scaffold0166 (1 HSPs)
scaffold0166 (11-249)||(9452-9689)
[»] scaffold0484 (1 HSPs)
scaffold0484 (26-128)||(1289-1391)
[»] scaffold0278 (1 HSPs)
scaffold0278 (35-128)||(5979-6072)
[»] scaffold0235 (2 HSPs)
scaffold0235 (39-128)||(11170-11259)
scaffold0235 (56-126)||(14027-14097)
[»] scaffold0151 (1 HSPs)
scaffold0151 (11-118)||(10540-10647)
[»] scaffold0084 (1 HSPs)
scaffold0084 (11-140)||(10539-10661)
[»] scaffold0165 (3 HSPs)
scaffold0165 (26-128)||(3856-3958)
scaffold0165 (26-128)||(7920-8022)
scaffold0165 (54-126)||(27303-27375)
[»] scaffold0309 (1 HSPs)
scaffold0309 (11-128)||(6985-7102)
[»] scaffold0124 (1 HSPs)
scaffold0124 (11-131)||(24268-24389)
[»] scaffold0423 (1 HSPs)
scaffold0423 (11-91)||(10890-10970)
[»] scaffold0555 (3 HSPs)
scaffold0555 (35-114)||(10210-10289)
scaffold0555 (127-245)||(10274-10391)
scaffold0555 (11-99)||(994-1082)
[»] scaffold0320 (1 HSPs)
scaffold0320 (55-128)||(12381-12454)
[»] scaffold0032 (1 HSPs)
scaffold0032 (15-128)||(51954-52067)
[»] scaffold0022 (2 HSPs)
scaffold0022 (54-129)||(128555-128630)
scaffold0022 (54-126)||(80726-80798)
[»] scaffold0106 (4 HSPs)
scaffold0106 (11-97)||(1692-1778)
scaffold0106 (11-97)||(7669-7755)
scaffold0106 (11-79)||(16082-16150)
scaffold0106 (54-122)||(19252-19320)
[»] scaffold0012 (1 HSPs)
scaffold0012 (55-128)||(227878-227951)
[»] scaffold0076 (1 HSPs)
scaffold0076 (56-128)||(24183-24255)
[»] scaffold0017 (2 HSPs)
scaffold0017 (16-96)||(190905-190985)
scaffold0017 (16-96)||(192608-192688)
[»] scaffold0004 (2 HSPs)
scaffold0004 (54-122)||(332784-332852)
scaffold0004 (11-96)||(70211-70296)
[»] scaffold0601 (1 HSPs)
scaffold0601 (55-126)||(7118-7189)
[»] scaffold0476 (2 HSPs)
scaffold0476 (26-97)||(5996-6067)
scaffold0476 (26-97)||(7191-7262)
[»] scaffold0586 (1 HSPs)
scaffold0586 (56-122)||(2245-2311)
[»] scaffold0123 (1 HSPs)
scaffold0123 (55-129)||(25567-25641)
[»] scaffold0327 (1 HSPs)
scaffold0327 (28-97)||(680-749)
[»] scaffold0139 (2 HSPs)
scaffold0139 (11-76)||(20418-20483)
scaffold0139 (56-126)||(38761-38831)
[»] scaffold0216 (1 HSPs)
scaffold0216 (11-75)||(16740-16804)
[»] scaffold2044 (1 HSPs)
scaffold2044 (12-71)||(1075-1134)
[»] scaffold0346 (1 HSPs)
scaffold0346 (12-71)||(17343-17402)
[»] scaffold1257 (1 HSPs)
scaffold1257 (207-249)||(2030-2072)
[»] scaffold0367 (1 HSPs)
scaffold0367 (35-97)||(1307-1369)
[»] scaffold0357 (2 HSPs)
scaffold0357 (56-122)||(3162-3228)
scaffold0357 (54-126)||(13595-13667)
[»] scaffold0098 (1 HSPs)
scaffold0098 (56-126)||(29149-29219)
[»] scaffold0046 (1 HSPs)
scaffold0046 (11-77)||(14914-14980)
[»] scaffold1895 (1 HSPs)
scaffold1895 (11-96)||(867-952)
[»] scaffold0297 (2 HSPs)
scaffold0297 (11-96)||(10440-10525)
scaffold0297 (11-96)||(15298-15383)
[»] scaffold2080 (1 HSPs)
scaffold2080 (54-98)||(346-390)
[»] scaffold0420 (1 HSPs)
scaffold0420 (54-98)||(5916-5960)
[»] scaffold0324 (1 HSPs)
scaffold0324 (11-75)||(15837-15901)
[»] scaffold0210 (2 HSPs)
scaffold0210 (26-78)||(21440-21492)
scaffold0210 (26-78)||(29332-29384)
[»] scaffold0005 (1 HSPs)
scaffold0005 (54-126)||(268116-268188)
[»] scaffold1351 (1 HSPs)
scaffold1351 (54-125)||(471-542)
[»] scaffold0780 (1 HSPs)
scaffold0780 (55-122)||(2934-3001)
[»] scaffold0393 (1 HSPs)
scaffold0393 (26-97)||(1904-1975)
[»] scaffold0158 (2 HSPs)
scaffold0158 (29-96)||(3254-3321)
scaffold0158 (34-96)||(6920-6982)
[»] scaffold0040 (1 HSPs)
scaffold0040 (67-126)||(103257-103316)
[»] scaffold0035 (1 HSPs)
scaffold0035 (34-97)||(46369-46432)
[»] scaffold0014 (1 HSPs)
scaffold0014 (54-129)||(206109-206184)
[»] scaffold1124 (1 HSPs)
scaffold1124 (26-96)||(2291-2361)
[»] scaffold0109 (2 HSPs)
scaffold0109 (64-98)||(35541-35575)
scaffold0109 (33-128)||(10954-11049)
[»] scaffold0029 (1 HSPs)
scaffold0029 (34-96)||(13173-13235)
[»] scaffold0008 (1 HSPs)
scaffold0008 (35-97)||(30388-30450)
[»] scaffold1326 (1 HSPs)
scaffold1326 (26-75)||(1134-1183)
[»] scaffold0412 (1 HSPs)
scaffold0412 (26-75)||(6050-6099)
[»] scaffold0311 (1 HSPs)
scaffold0311 (26-75)||(6712-6761)
[»] scaffold0280 (1 HSPs)
scaffold0280 (30-75)||(18940-18985)
[»] scaffold0101 (1 HSPs)
scaffold0101 (11-96)||(8576-8661)
[»] scaffold1552 (1 HSPs)
scaffold1552 (27-71)||(769-813)
[»] scaffold0546 (1 HSPs)
scaffold0546 (33-128)||(2258-2353)
[»] scaffold0525 (1 HSPs)
scaffold0525 (162-202)||(10642-10682)
[»] scaffold0215 (1 HSPs)
scaffold0215 (26-78)||(27256-27308)
[»] scaffold0141 (1 HSPs)
scaffold0141 (162-202)||(33458-33498)
[»] scaffold0104 (2 HSPs)
scaffold0104 (37-97)||(2240-2300)
scaffold0104 (37-97)||(9922-9982)
[»] scaffold0079 (1 HSPs)
scaffold0079 (35-75)||(44486-44526)
[»] scaffold0077 (1 HSPs)
scaffold0077 (54-98)||(55269-55313)
[»] scaffold0049 (1 HSPs)
scaffold0049 (162-202)||(81314-81354)
[»] scaffold0006 (2 HSPs)
scaffold0006 (54-98)||(97498-97542)
scaffold0006 (54-98)||(106776-106820)


Alignment Details
Target: chr4 (Bit Score: 156; Significance: 5e-83; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 35 - 249
Target Start/End: Complemental strand, 8846854 - 8846639
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    |||||||||||||| |||   ||||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8846854 ttttgacttttgagttgattcttagatgtttttgagtacctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 8846755  T
Q  135 tagaattaattttc-gtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaa 233  Q
    |||||| ||||||  |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||  |||||||||||||||    
T  8846754 tagaatgaattttttgtgagttgcaccttaactcgccatggcgagtagaggctctcgcctcgcgagctaactagttacagaatgtcttgtttatgttaaa 8846655  T
Q  234 tgcgatctttgtcgca 249  Q
    ||||||||||||||||    
T  8846654 tgcgatctttgtcgca 8846639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 56 - 249
Target Start/End: Complemental strand, 15099808 - 15099615
Alignment:
Q  56 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaattaattttcgtgagtt 155  Q
    ||||||| |||||||||||||||  ||| | || ||||||||||||||||| ||| |||||||||||||||||   ||| ||||| |||||| |||||||    
T  15099808 ttagatgtttttgagtgcctgaacttgtatgatgatgattaggaaagattgtagattgagattgaacctggaatagtttaagaatgaatttttgtgagtt 15099709  T
Q  156 gcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaatgcgatctttgtcgca 249  Q
    |||||| |||||||||||||||||||||||||  ||||||||||||||| |||||||||||  |||||||| |||||| |||||||||||||||    
T  15099708 gcacctgaactcgccatggcgagtagaggctctcgcctcgcgagctaaccagttacagaatgtcttgtttaggttaaaagcgatctttgtcgca 15099615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 35 - 249
Target Start/End: Complemental strand, 12774477 - 12774264
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    |||||||||||||| ||| | ||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| |||  |    
T  12774477 ttttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattagaaaagattggagaatgagattgaacctggagagacgt 12774378  T
Q  135 tagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaact-agttacagaataccttgtttatgttaaa 233  Q
    |||||| |||||| ||||  || |||| |||||||||||||||| ||||||||  |||||||||| ||  |  |||||||| | ||||||||| ||||||    
T  12774377 tagaatgaatttt-gtgaactgaacctgaactcgccatggcgagcagaggctctcgcctcgcgag-tacttgtgttacagactgccttgtttaggttaaa 12774280  T
Q  234 tgcgatctttgtcgca 249  Q
    ||||||| ||||||||    
T  12774279 tgcgatccttgtcgca 12774264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 35 - 249
Target Start/End: Original strand, 39705930 - 39706143
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    ||||||| ||| || ||| | ||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||| | |||||||||||||||   |||    
T  39705930 ttttgacctttaagttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattgaagattaagattgaacctggaatagttt 39706029  T
Q  135 tagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaat 234  Q
     ||||  |||||| | ||||| ||||| ||||||||||||||||||||||| |  ||||||||| ||  | ||||||||||| | ||||||| |||||||    
T  39706030 aagaacgaatttt-gagagttacacctgaactcgccatggcgagtagaggccctcgcctcgcgaactgcccagttacagaatgctttgtttaggttaaat 39706128  T
Q  235 gcgatctttgtcgca 249  Q
    |||||||||||||||    
T  39706129 gcgatctttgtcgca 39706143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 12 - 216
Target Start/End: Original strand, 44928542 - 44928746
Alignment:
Q  12 agagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaa 111  Q
    ||||||| |||||||||| ||| |||||||||||||| ||| | ||| ||| ||||||||||||||| || ||||||||||||||||||||| || ||||    
T  44928542 agagagcttgcaagattccgtgattttgacttttgagttgatccttatatgtttttgagtgcctgaacatatctaataatgattaggaaagaatgtagaa 44928641  T
Q  112 tgagattgaacctggaaagattttagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttac 211  Q
    ||||||||||||||||||||||||||||| ||  || | || |   |||  |||||||||||||||| ||||||||  ||||||||||  | | ||||||    
T  44928642 tgagattgaacctggaaagattttagaatgaaactttgggaatctgaccagaactcgccatggcgagcagaggctctcgcctcgcgagtgacccagttac 44928741  T
Q  212 agaat 216  Q
    |||||    
T  44928742 agaat 44928746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 56 - 249
Target Start/End: Complemental strand, 15190775 - 15190582
Alignment:
Q  56 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaattaattttcgtgagtt 155  Q
    ||||||| ||||||||||||||| ||||||||| |||||||| |||| ||  ||| ||||||| |||||||||   ||| |||||  ||||| | | |||    
T  15190775 ttagatgtttttgagtgcctgaacatgtctaattatgattagaaaaggttctagattgagatttaacctggaatagtttaagaatggatttttgggcgtt 15190676  T
Q  156 gcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaatgcgatctttgtcgca 249  Q
     || ||  ||||||||||||||||||||||||  ||||||||||||||| ||||||||||| ||||||||| |||||| |||||||||||||||    
T  15190675 acatctgtactcgccatggcgagtagaggctctcgcctcgcgagctaaccagttacagaatgccttgtttaggttaaaagcgatctttgtcgca 15190582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 16597148 - 16597028
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||||||  |||||| ||||||  ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || |||    
T  16597148 cagagagcatgcaagattctgtaattttgatttttgaattgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 16597049  T
Q  111 atgagattgaacctggaaaga 131  Q
    |||||||||||||||||||||    
T  16597048 atgagattgaacctggaaaga 16597028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 11 - 249
Target Start/End: Original strand, 22633831 - 22634068
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  ||| |||||||||||||| ||| ||||||||||  ||||||||||||| |||||||||| ||||||||||||| || ||     
T  22633831 cagagagcatgcaagatttcgtgattttgacttttgagttgaactttagatgcccttgagtgcctgaacatgtctaatattgattaggaaagaatgtagg 22633930  T
Q  111 atgagattgaacctggaaagattttagaattaattttcgtgagttgcacctt-aactcgccatggcgagtagaggctcctgcctcgcgagctaactagtt 209  Q
    |||||||||||||||||||||  ||||||| ||  || | ||    ||  || |||||||||||||||| ||||||||  |||||||||||      |||    
T  22633931 atgagattgaacctggaaaga-cttagaatgaaactttg-gataatcagattgaactcgccatggcgagcagaggctctcgcctcgcgagcacttgtgtt 22634028  T
Q  210 acagaataccttgtttatgttaaatgcgatctttgtcgca 249  Q
    ||||||| ||||||||| ||||||||||||||||||||||    
T  22634029 acagaatgccttgtttaggttaaatgcgatctttgtcgca 22634068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 11 - 249
Target Start/End: Complemental strand, 24029244 - 24029007
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  ||| |||||||||||||| ||| | |||||||  |||||||||||||| |||||||||| |||||| |||||| || ||     
T  24029244 cagagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgtctttgagtgcctgaacatgtctaatattgattatgaaagaatgtagg 24029145  T
Q  111 atgagattgaacctggaaagattttagaat-taattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactag-- 207  Q
    |||||||||||||||||||||  |||||||  || ||| | || |   | || |||||||||||||||| ||||||||  |||||||||||  |||||      
T  24029144 atgagattgaacctggaaaga-cttagaatgaaactttggagaatctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgagc--actagta 24029049  T
Q  208 ttacagaataccttgtttatgttaaatgcgatctttgtcgca 249  Q
    ||||||||| ||||||||| ||||||||||||||||||||||    
T  24029048 ttacagaatgccttgtttaggttaaatgcgatctttgtcgca 24029007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 14052932 - 14053048
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||| || ||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||||| || ||     
T  14052932 cagagagcatgcaagattc-gtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagaatgtagg 14053030  T
Q  111 atgagattgaacctggaa 128  Q
    |||||||||||| |||||    
T  14053031 atgagattgaacttggaa 14053048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 11 - 140
Target Start/End: Complemental strand, 15091400 - 15091271
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||||||| |||||||||  ||| |||||||||||||| ||| ||||||||||||||||||  ||||| |||||||||| ||||||||||||| || |||    
T  15091400 cagagagcttgcaagatttcgtgattttgacttttgagttgatctttagatgcttttgagtttctgaacatgtctaatattgattaggaaagaatgtaga 15091301  T
Q  111 atgagattgaacctggaaagattttagaat 140  Q
    |||||||||||||||||| |||||||||||    
T  15091300 atgagattgaacctggaaggattttagaat 15091271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 11 - 140
Target Start/End: Complemental strand, 22636937 - 22636808
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||||||||||||||||| |||| ||||||||| |||| ||| | ||||||||||||||||| ||||| |||||||||||||||||||||||| || ||     
T  22636937 cagagagcatgcaagattttgtgattttgacttctgagttgatccttagatgcttttgagtgtctgaagatgtctaataatgattaggaaagaatgtagg 22636838  T
Q  111 atgagattgaacctggaaagattttagaat 140  Q
    ||||||||||||||||||| ||| ||||||    
T  22636837 atgagattgaacctggaaaaattgtagaat 22636808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 12 - 140
Target Start/End: Complemental strand, 14039151 - 14039023
Alignment:
Q  12 agagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaa 111  Q
    ||||||| |||||||||   || |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||| ||||||| || ||||    
T  14039151 agagagcttgcaagatttcatgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgatttggaaagaatgtagaa 14039052  T
Q  112 tgagattgaacctggaaagattttagaat 140  Q
    ||||||||||||| |||||||||||||||    
T  14039051 tgagattgaacctagaaagattttagaat 14039023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 15552316 - 15552196
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  || ||||||||||||||| ||| | ||| ||||||||||||||||||| |||||||||||||||||||||||| || ||     
T  15552316 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttatatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 15552217  T
Q  111 atgagattgaacctggaaaga 131  Q
    ||||||||| |||||||||||    
T  15552216 atgagattggacctggaaaga 15552196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 11 - 134
Target Start/End: Original strand, 16239610 - 16239734
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaag-attggag 109  Q
    ||||||||||||||||||  ||  |||||||||||||| ||  | ||||||||||||||||||||||| ||||||||||||||||||||||| | || ||    
T  16239610 cagagagcatgcaagatttcgtaattttgacttttgagttgctccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaaatgtag 16239709  T
Q  110 aatgagattgaacctggaaagattt 134  Q
    |||||||||||||||||||||||||    
T  16239710 aatgagattgaacctggaaagattt 16239734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 11 - 249
Target Start/End: Original strand, 13812427 - 13812664
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  ||| |||||||||||||| ||| | |||||||| |||||||| ||||| |||||||||| ||||||||||| | || ||     
T  13812427 cagagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgcctttgagtgtctgaacatgtctaatattgattaggaaataatgtagg 13812526  T
Q  111 atgagattgaacctggaaagattttagaat-taattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactag-- 207  Q
    |||||||||||||||||||||  |||||||  || ||| | || |   | || |||||||||||||||| ||||||||  |||||||||||  |||||      
T  13812527 atgagattgaacctggaaaga-cttagaatgaaactttggagaatctga-ctaaactcgccatggcgagcagaggctctcgcctcgcgagc--actagta 13812622  T
Q  208 ttacagaataccttgtttatgttaaatgcgatctttgtcgca 249  Q
    ||||||||| | ||||||| |||||||| |||||||||||||    
T  13812623 ttacagaatgctttgtttaggttaaatgtgatctttgtcgca 13812664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 249
Target Start/End: Original strand, 20156908 - 20157145
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  ||| |||||||||||||| | | | |||||||| |||||||||||||| |||||||||| ||||||||||||| || ||     
T  20156908 cagagagcatgcaagatttcgtgattttgacttttgagttaatccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtagg 20157007  T
Q  111 atgagattgaacctggaaagattttagaattaattttcgt-gagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagt- 208  Q
    ||||||||||||||||||||  || ||||| ||  || |  || |   || | |||||||||||||| | ||||||||  |||||||||||  ||||||     
T  20157008 atgagattgaacctggaaaggctt-agaatgaaactttgaagaatatgac-tgaactcgccatggcgtgcagaggctctcgcctcgcgagc--actagta 20157103  T
Q  209 -tacagaataccttgtttatgttaaatgcgatctttgtcgca 249  Q
     |||||| | ||||||||| ||||||||||||||||||||||    
T  20157104 ttacagagtgccttgtttaggttaaatgcgatctttgtcgca 20157145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 11 - 133
Target Start/End: Complemental strand, 44053332 - 44053210
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||   || |||||||||||||| ||| | ||||||||||||||||| ||||| |||||||||||||||| ||||||| || ||     
T  44053332 cagagagcatgcaagatttcatgattttgacttttgagttgatccttagatgcttttgagtgtctgaacatgtctaataatgattgggaaagaatgtagg 44053233  T
Q  111 atgagattgaacctggaaagatt 133  Q
    ||||||||||||||| |||||||    
T  44053232 atgagattgaacctgtaaagatt 44053210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 35 - 140
Target Start/End: Complemental strand, 6190912 - 6190807
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| |||| ||||||||||||||| ||| || || |||||||||||||||||||||||     
T  6190912 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacctggaaagattg 6190813  T
Q  135 tagaat 140  Q
    ||||||    
T  6190812 tagaat 6190807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 11 - 140
Target Start/End: Complemental strand, 7799200 - 7799071
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  ||| ||||||||| |||| ||| | ||||||||||||||||||||||| ||| |||||||||||||||| | | || ||     
T  7799200 cagagagcatgcaagatttcgtgattttgacttctgagttgatccttagatgcttttgagtgcctgaacatgactaataatgattaggacataatgtagg 7799101  T
Q  111 atgagattgaacctggaaagattttagaat 140  Q
    |||||||||||||||||||| || ||||||    
T  7799100 atgagattgaacctggaaagtttgtagaat 7799071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 11 - 128
Target Start/End: Complemental strand, 12903248 - 12903132
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  ||  |||||||||||||| ||| | ||||||||||| ||||||||||| |||||||||||||||||||||||| || ||     
T  12903248 cagagagcatgcaagatttcgtaattttgacttttgagttgaaccttagatgcttt-gagtgcctgaacatgtctaataatgattaggaaagaatgtagg 12903150  T
Q  111 atgagattgaacctggaa 128  Q
    ||||||||||||||||||    
T  12903149 atgagattgaacctggaa 12903132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 55 - 226
Target Start/End: Original strand, 15464591 - 15464762
Alignment:
Q  55 tttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaattaattttcgtgagt 154  Q
    |||||||| |||||||||||||||||||| |||||||||||||||||||||  ||| |||||||||||||| ||   ||| |||||  ||||| | | ||    
T  15464591 tttagatgattttgagtgcctgaatatgtataataatgattaggaaagattttagattgagattgaacctgaaatagtttaagaatggatttttgggtgt 15464690  T
Q  155 tgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgttta 226  Q
    | ||||| ||||| |||| ||||||||||||||  |||||||||| |  | |||||||||||  ||||||||    
T  15464691 tacacctgaactcaccatagcgagtagaggctctcgcctcgcgagttgcccagttacagaatgacttgttta 15464762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 35 - 218
Target Start/End: Complemental strand, 44102688 - 44102506
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    |||||||||||||| ||| | ||||||||||||||||||||||  |||| |||||||||||| | |||| || || ||||||||||||||||| ||||||    
T  44102688 ttttgacttttgagttgatccttagatgcttttgagtgcctgagcatgtttaataatgattatg-aagaatgtaggatgagattgaacctggatagattt 44102590  T
Q  135 tagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaatac 218  Q
    |||||| ||  || | || |   |||| |||||||||||||||| ||||||||  ||||||||||  | ||| |||||||||||    
T  44102589 tagaataaaactttgagaatctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacctatttacagaatac 44102506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 14 - 128
Target Start/End: Complemental strand, 7089366 - 7089252
Alignment:
Q  14 agagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatg 113  Q
    |||||||||||||||  ||  |||||||||||||| ||| | |||||||| | |||||||||||| |||||||||||||||||||||||| || || |||    
T  7089366 agagcatgcaagatttcgtaattttgacttttgagttgaaccttagatgcctatgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatg 7089267  T
Q  114 agattgaacctggaa 128  Q
    |||||||||||||||    
T  7089266 agattgaacctggaa 7089252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 55 - 216
Target Start/End: Original strand, 52242855 - 52243016
Alignment:
Q  55 tttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaattaattttcgtgagt 154  Q
    |||||||| ||| ||||||||||| |||| |||||||||| ||||||||||  |||||||||||||||||||||   ||| |||||  ||| | | ||||    
T  52242855 tttagatgatttcgagtgcctgaacatgtataataatgatcaggaaagattctagaatgagattgaacctggaatagtttaagaatgcattgttgggagt 52242954  T
Q  155 tgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaat 216  Q
    | ||||| |||||||||| ||||||||||||||  |||||||||| |  | |||||||||||    
T  52242955 tacacctgaactcgccatagcgagtagaggctctcgcctcgcgagttgcccagttacagaat 52243016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 56 - 186
Target Start/End: Original strand, 43198251 - 43198381
Alignment:
Q  56 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaattaattttcgtgagtt 155  Q
    ||||||| ||||||||||||||| |||| |||||||||||||||||||||  ||| ||||||||||| |||||   ||| |||||| ||||| | |||||    
T  43198251 ttagatgtttttgagtgcctgaacatgtgtaataatgattaggaaagattttagattgagattgaacatggaatagtttaagaattgatttttgggagtt 43198350  T
Q  156 gcaccttaactcgccatggcgagtagaggct 186  Q
     ||||| ||||| |||| |||||||||||||    
T  43198351 acacctgaactcaccatagcgagtagaggct 43198381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 128
Target Start/End: Complemental strand, 3097135 - 3097018
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||   |  |||||||||||||| | | | ||||||| ||| ||||||||||| |||||||||||||||||||||||| || ||     
T  3097135 cagagagcatgcaagatttcataattttgacttttgagttaaaccttagatgttttcgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 3097036  T
Q  111 atgagattgaacctggaa 128  Q
    ||||||||||||||||||    
T  3097035 atgagattgaacctggaa 3097018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 35 - 187
Target Start/End: Original strand, 16377164 - 16377316
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    |||||||||||||| ||| | ||||||||||||||| | ||||| |||||||||||||||||||||| | || || |||||||||||||||||| |||      
T  16377164 ttttgacttttgagttgatccttagatgcttttgagcgtctgaacatgtctaataatgattaggaaataatgtaggatgagattgaacctggaatgatcg 16377263  T
Q  135 tagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctc 187  Q
    |||||| || ||| | || |   |||| ||||||||| |||||| ||||||||    
T  16377264 tagaatgaacttttgggaatctgacctgaactcgccacggcgagcagaggctc 16377316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 35 - 201
Target Start/End: Complemental strand, 13845018 - 13844852
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    ||||||||||| || ||| | ||||||| ||||||||| ||||| ||||||||| |||||||| |||||||  |||   ||||| |||||||||   |||    
T  13845018 ttttgacttttaagttgaaccttagatgtttttgagtgtctgaacatgtctaattatgattagaaaagattctagatcaagatttaacctggaatagttt 13844919  T
Q  135 tagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagct 201  Q
     |||||  ||||| | ||||| |||||  ||| ||||||||||||||||||||  ||||||||||||    
T  13844918 aagaatggatttttgggagttacacctgtacttgccatggcgagtagaggctctcgcctcgcgagct 13844852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 26 - 122
Target Start/End: Original strand, 17047717 - 17047813
Alignment:
Q  26 attctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaac 122  Q
    ||||||| ||||||||||||||| ||| | |||||||  |||||||||||||| ||| |||||||||||||||||| | || || ||||||||||||    
T  17047717 attctgtatttttgacttttgagttgaaccttagatgtctttgagtgcctgaacatgactaataatgattaggaaaaaatgtaggatgagattgaac 17047813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 35 - 127
Target Start/End: Original strand, 21814945 - 21815037
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctgga 127  Q
    |||||||||||||| ||| | ||||||||||||||||| ||||| |||| ||||||||||||||||||| |  ||||||| | ||||||||||    
T  21814945 ttttgacttttgagttgatccttagatgcttttgagtgtctgaacatgtttaataatgattaggaaagaatttagaatgataatgaacctgga 21815037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 35 - 127
Target Start/End: Original strand, 21818367 - 21818459
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctgga 127  Q
    |||||||||||||| ||| | ||||||||||||||||| ||||| |||| ||||||||||||||||||| |  ||||||| | ||||||||||    
T  21818367 ttttgacttttgagttgatccttagatgcttttgagtgtctgaacatgtttaataatgattaggaaagaatttagaatgataatgaacctgga 21818459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 163 - 249
Target Start/End: Complemental strand, 3332237 - 3332151
Alignment:
Q  163 aactcgccatggcgagtagaggctcctgcctcgcgagctaactagt--tacagaataccttgtttatgttaaatgcgatctttgtcgca 249  Q
    |||||||||||||||| ||||||||  |||||||||||  ||||||  |||||||| ||||||||| ||||||||||||||||||||||    
T  3332237 aactcgccatggcgagcagaggctctcgcctcgcgagc--actagtattacagaatgccttgtttaggttaaatgcgatctttgtcgca 3332151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 15868298 - 15868368
Alignment:
Q  56 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctgg 126  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||| ||  ||| |||||||||||||||    
T  15868298 ttagatgattttgagtgcctgaatatgtataataatgattaggaaagtttttagattgagattgaacctgg 15868368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 35 - 199
Target Start/End: Original strand, 21815274 - 21815437
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    |||||||||||||| ||| | ||||||||||||||||| ||||| |||| ||||||||||||||||| | |  ||||||| | ||||||||| |  | ||    
T  21815274 ttttgacttttgagttgatccttagatgcttttgagtgtctgaacatgtttaataatgattaggaaataatttagaatgataatgaacctgg-attaatt 21815372  T
Q  135 tagaattaa-ttttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgag 199  Q
     ||||| || |||| |  || || |||| |||||||||||||||||||||||||  ||||||||||    
T  21815373 aagaatgaactttttggaagctg-acctgaactcgccatggcgagtagaggctctcgcctcgcgag 21815437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 126
Target Start/End: Original strand, 13405 - 13506
Alignment:
Q  25 gattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacct 124  Q
    |||| ||| ||||||||  || || ||| ||||||||| ||||||||||||||| | || |||||||||||||| ||| ||  ||| |||||||||||||    
T  13405 gattttgtatttttgacccttaagttgaactttagatgattttgagtgcctgaacaagtataataatgattaggcaagtttttagattgagattgaacct 13504  T
Q  125 gg 126  Q
    ||    
T  13505 gg 13506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 122
Target Start/End: Complemental strand, 17333817 - 17333749
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaac 122  Q
    ||||||||| ||||||||||||||||||||  ||||||||||||| ||| ||  ||| |||||||||||    
T  17333817 ctttagatgattttgagtgcctgaatatgtacaataatgattaggcaagtttttagattgagattgaac 17333749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 97
Target Start/End: Original strand, 16356587 - 16356658
Alignment:
Q  26 attctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 97  Q
    ||||||| ||||||||||||||| ||| | |||||||||||||||||||| || |||| || ||| ||||||    
T  16356587 attctgtatttttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttattaaagattag 16356658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 65 - 103
Target Start/End: Complemental strand, 17046765 - 17046727
Alignment:
Q  65 tttgagtgcctgaatatgtctaataatgattaggaaaga 103  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  17046765 tttgagtgcctgaacatgtctaataatgattaggaaaga 17046727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 32851909 - 32851839
Alignment:
Q  56 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctgg 126  Q
    ||||||| |||||||||||||||||||| |||||||||||||  ||| ||  ||| |||||||| ||||||    
T  32851909 ttagatgattttgagtgcctgaatatgtataataatgattagacaagtttttagattgagattggacctgg 32851839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 44676132 - 44676047
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 96  Q
    ||||||||||| |  ||||| | ||||||||||||||| ||| | ||||||| |||||||||||| || |||| || |||||||||    
T  44676132 cagagagcatgtagaattctatatttttgacttttgagttgaaccttagatgtttttgagtgcctaaagatgtttattaatgatta 44676047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 152605 - 152561
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattagg 98  Q
    ||||||||| |||||||||||||||||||| ||| ||||||||||    
T  152605 ctttagatgattttgagtgcctgaatatgtataagaatgattagg 152561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 13570012 - 13569948
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcct 75  Q
    ||||||||||| |  ||||||| ||||||||||||||| ||| | ||||||| ||||||||||||    
T  13570012 cagagagcatgtagaattctgtatttttgacttttgagttgaaccttagatgtttttgagtgcct 13569948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 15792311 - 15792267
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattagg 98  Q
    ||||||||| ||||||||| |||||||||| ||||||||||||||    
T  15792311 ctttagatgattttgagtgtctgaatatgtataataatgattagg 15792267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 26789874 - 26789830
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattagg 98  Q
    ||||||||| |||||||||||||||||||| |||||| |||||||    
T  26789874 ctttagatgattttgagtgcctgaatatgtataataacgattagg 26789830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 97
Target Start/End: Complemental strand, 15094258 - 15094187
Alignment:
Q  26 attctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 97  Q
    ||||||| ||||||||||||||| ||| | ||||||| |||||||||||| || |||| || ||| ||||||    
T  15094258 attctgtatttttgacttttgagttgaaccttagatgtttttgagtgcctaaagatgtttattaaagattag 15094187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 129
Target Start/End: Original strand, 53081758 - 53081833
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaa 129  Q
    ||||||||| || ||||||||| || |||| |||||||||||| | ||| ||  ||| ||||||||||||||||||    
T  53081758 ctttagatgattctgagtgcctaaacatgtataataatgattaagcaagtttttagattgagattgaacctggaaa 53081833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 199
Target Start/End: Complemental strand, 12903112 - 12903071
Alignment:
Q  158 accttaactcgccatggcgagtagaggctcctgcctcgcgag 199  Q
    |||| ||||||||| |||||||||||||||| ||||||||||    
T  12903112 acctgaactcgccacggcgagtagaggctcccgcctcgcgag 12903071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 16348326 - 16348375
Alignment:
Q  26 attctgtgtttttgacttttgagatgacctttagatgcttttgagtgcct 75  Q
    |||||||  |||||||||||||| ||| | ||||||||||||||||||||    
T  16348326 attctgtaattttgacttttgagttgaaccttagatgcttttgagtgcct 16348375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 23843979 - 23843894
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 96  Q
    ||||||||||| |  |||||||  |||||||||||||| ||| | ||||||| |||||||||||| || ||||  | |||||||||    
T  23843979 cagagagcatgtagaattctgtacttttgacttttgagttgaaccttagatgtttttgagtgcctaaagatgttcattaatgatta 23843894  T

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Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 202
Target Start/End: Complemental strand, 287442 - 287402
Alignment:
Q  162 taactcgccatggcgagtagaggctcctgcctcgcgagcta 202  Q
    ||||||||| ||||||||||||||||  |||||||||||||    
T  287442 taactcgccgtggcgagtagaggctctcgcctcgcgagcta 287402  T

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Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 3413256 - 3413212
Alignment:
Q  27 ttctgtgtttttgacttttgagatgacctttagatgcttttgagt 71  Q
    ||||| |||||||||||||||| ||| | ||||||||||||||||    
T  3413256 ttctgagtttttgacttttgagttgaaccttagatgcttttgagt 3413212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 12570521 - 12570457
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcct 75  Q
    ||||||||||| |  ||||||| |||||||||| |||| ||| | ||||||| ||||||||||||    
T  12570521 cagagagcatgtagaattctgtatttttgacttgtgagttgaaccttagatgtttttgagtgcct 12570457  T

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Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 122
Target Start/End: Complemental strand, 16043549 - 16043481
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaac 122  Q
    ||||||||| |||||||||||| ||||||| ||| ||||||||| ||| |||  ||| ||| |||||||    
T  16043549 ctttagatgattttgagtgcctcaatatgtataagaatgattagaaaaaattttagattgaaattgaac 16043481  T

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Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 202
Target Start/End: Complemental strand, 16359855 - 16359815
Alignment:
Q  162 taactcgccatggcgagtagaggctcctgcctcgcgagcta 202  Q
    ||||||||| ||||||||||||||||  |||||||||||||    
T  16359855 taactcgccgtggcgagtagaggctctcgcctcgcgagcta 16359815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 199
Target Start/End: Original strand, 21815072 - 21815108
Alignment:
Q  163 aactcgccatggcgagtagaggctcctgcctcgcgag 199  Q
    |||||||||||||||||||||||||  ||||||||||    
T  21815072 aactcgccatggcgagtagaggctctcgcctcgcgag 21815108  T

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Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 199
Target Start/End: Original strand, 21818494 - 21818530
Alignment:
Q  163 aactcgccatggcgagtagaggctcctgcctcgcgag 199  Q
    |||||||||||||||||||||||||  ||||||||||    
T  21818494 aactcgccatggcgagtagaggctctcgcctcgcgag 21818530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 31116821 - 31116861
Alignment:
Q  162 taactcgccatggcgagtagaggctcctgcctcgcgagcta 202  Q
    ||||||||| ||||||||||||||||  |||||||||||||    
T  31116821 taactcgccgtggcgagtagaggctctcgcctcgcgagcta 31116861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 55502516 - 55502556
Alignment:
Q  162 taactcgccatggcgagtagaggctcctgcctcgcgagcta 202  Q
    ||||||||| ||||||||||||||||  |||||||||||||    
T  55502516 taactcgccgtggcgagtagaggctctcgcctcgcgagcta 55502556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 151; Significance: 5e-80; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 35 - 249
Target Start/End: Complemental strand, 21566023 - 21565809
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    |||||||||||||| ||| | ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21566023 ttttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 21565924  T
Q  135 tagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaat 234  Q
    |||||| ||||||||||| ||| |||| |||||||||||||||| ||||||||  |||||| ||||||||||||||||||||  ||||||||||| ||||    
T  21565923 tagaatgaattttcgtgaattgtacctgaactcgccatggcgagcagaggctctcgcctcgtgagctaactagttacagaatgacttgtttatgtaaaat 21565824  T
Q  235 gcgatctttgtcgca 249  Q
    |||||||||||||||    
T  21565823 gcgatctttgtcgca 21565809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 35 - 239
Target Start/End: Original strand, 22959175 - 22959379
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    |||||||||||||| ||| | ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||    
T  22959175 ttttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggagagactt 22959274  T
Q  135 tagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaat 234  Q
    |||||| |||||| ||||  || |||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||| |||||||    
T  22959275 tagaatgaatttttgtgaactgaacctgaactcgccatggcgagtagaggctctcgcctcgcgagctaactagttacagaatgccttgtttaggttaaat 22959374  T
Q  235 gcgat 239  Q
    |||||    
T  22959375 gcgat 22959379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 35 - 249
Target Start/End: Complemental strand, 19669379 - 19669164
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    |||||||||||||| ||| | ||||||| ||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||| |||||||| ||    
T  19669379 ttttgacttttgagttgatccttagatgtttttgagtgtctgaacatgtctaataatgattaggaaagattggggaatgagattgaacgtggaaagactt 19669280  T
Q  135 tagaattaa-ttttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaa 233  Q
    |||||| || |||| |||| ||| |||| |||||||||||||| ||||||||||  ||||| | ||||||||||||||||||| ||||||||| | ||||    
T  19669279 tagaatgaattttttgtgaattgtacctgaactcgccatggcgtgtagaggctctcgcctcaccagctaactagttacagaatgccttgtttaggataaa 19669180  T
Q  234 tgcgatctttgtcgca 249  Q
    || |||  ||||||||    
T  19669179 tgtgattcttgtcgca 19669164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 56 - 249
Target Start/End: Original strand, 5888838 - 5889031
Alignment:
Q  56 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaattaattttcgtgagtt 155  Q
    ||||||| |||||||||||||||  ||| | || ||||||||||||||||| ||| ||||||||||| |||||   ||| ||||| ||| || |||||||    
T  5888838 ttagatgtttttgagtgcctgaacttgtatgatgatgattaggaaagattgtagattgagattgaacatggaatagtttaagaatgaatctttgtgagtt 5888937  T
Q  156 gcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaatgcgatctttgtcgca 249  Q
    |||||| |||||||||||||||||||||||||  ||||||||||||| | | ||||||||| ||||||||| ||||||||||||||||||||||    
T  5888938 gcacctgaactcgccatggcgagtagaggctctcgcctcgcgagctacccatttacagaatgccttgtttaggttaaatgcgatctttgtcgca 5889031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 35 - 249
Target Start/End: Original strand, 21329137 - 21329351
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    ||||||| ||| || ||| | ||||||| ||||||||||||||| ||||||| | |||||||| |||||||  ||| |||||||||||||||||  ||||    
T  21329137 ttttgacctttaagttgaaccttagatgtttttgagtgcctgaacatgtctagttatgattagaaaagattctagattgagattgaacctggaataattt 21329236  T
Q  135 tagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaat 234  Q
      |||| |||||| | ||||||||| | |||||||||| ||||||||||||||  |||||||||  || ||||||||||||| ||||||||| |||||||    
T  21329237 aggaatgaatttttgggagttgcacttgaactcgccatagcgagtagaggctctcgcctcgcgaattacctagttacagaatgccttgtttaggttaaat 21329336  T
Q  235 gcgatctttgtcgca 249  Q
    |||||||||||||||    
T  21329337 gcgatctttgtcgca 21329351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 12 - 249
Target Start/End: Original strand, 21871190 - 21871426
Alignment:
Q  12 agagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaa 111  Q
    |||||||||||||||||  ||| |||||||||||||| ||| | ||||||||||||||||||||||| |||| || |||||||||||||||| || || |    
T  21871190 agagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtttattaatgattaggaaagagtgtagga 21871289  T
Q  112 tgagattgaacctggaaagattttagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttac 211  Q
    |||||||||||||||||||||| | ||||  | ||| |||| |   ||||  ||||||||||||||||||||||||| | ||||||||||||| |  |||    
T  21871290 tgagattgaacctggaaagattatggaatggacttttgtgattctgacctgtactcgccatggcgagtagaggctcccggctcgcgagctaaccaaatac 21871389  T
Q  212 agaataccttgtttatgttaaatgcgatctttgtcgca 249  Q
    ||||| |||||  || |||||| |||||| ||||||||    
T  21871390 agaatgccttg-ctaggttaaacgcgatccttgtcgca 21871426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 12 - 249
Target Start/End: Original strand, 21875470 - 21875706
Alignment:
Q  12 agagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaa 111  Q
    |||||||||||||||||  ||| |||||||||||||| ||| | ||||||||||||||||||||||| |||| || |||||||||||||||| || || |    
T  21875470 agagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtttattaatgattaggaaagagtgtagga 21875569  T
Q  112 tgagattgaacctggaaagattttagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttac 211  Q
    |||||||||||||||||||||| | ||||  | ||| |||| |   ||||  ||||||||||||||||||||||||| | ||||||||||||| |  |||    
T  21875570 tgagattgaacctggaaagattatggaatggacttttgtgattctgacctgtactcgccatggcgagtagaggctcccggctcgcgagctaaccaaatac 21875669  T
Q  212 agaataccttgtttatgttaaatgcgatctttgtcgca 249  Q
    ||||| |||||  || |||||| |||||| ||||||||    
T  21875670 agaatgccttg-ctaggttaaacgcgatccttgtcgca 21875706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 8 - 134
Target Start/End: Original strand, 21985762 - 21985888
Alignment:
Q  8 gaacagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattgg 107  Q
    |||||||||||||||||||||  ||| |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| ||     
T  21985762 gaacagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgt 21985861  T
Q  108 agaatgagattgaacctggaaagattt 134  Q
    |||||||||||||||||||||||||||    
T  21985862 agaatgagattgaacctggaaagattt 21985888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 11 - 249
Target Start/End: Original strand, 22119811 - 22120048
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||||||||||||| ||| |||| |||||||||||||| ||| | |||||||| |||||||||||||| |||||||||| ||||||||||||| || ||     
T  22119811 cagagagcatgcaaaattttgtgattttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtagg 22119910  T
Q  111 atgagattgaacctggaaagattttagaat-taattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactag-- 207  Q
    |||||||||||||||||||||  |||||||  || ||| | || |   | || |||||||||||||||| ||||||||  |||||||||||  |||||      
T  22119911 atgagattgaacctggaaaga-cttagaatgaaactttggagaatctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgagc--actagta 22120006  T
Q  208 ttacagaataccttgtttatgttaaatgcgatctttgtcgca 249  Q
    ||||||||| ||||||||| ||||||||||||||||||||||    
T  22120007 ttacagaatgccttgtttaggttaaatgcgatctttgtcgca 22120048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 11 - 199
Target Start/End: Complemental strand, 1096970 - 1096782
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  ||| |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||     
T  1096970 cagagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 1096871  T
Q  111 atgagattgaacctggaaagattttagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgag 199  Q
    ||||||||||| |||||||||||  ||||| || ||| |  | |   |||| ||||||||| |||||||||||||||  ||||||||||    
T  1096870 atgagattgaatctggaaagattgcagaatgaacttttggaaatctgacctgaactcgccacggcgagtagaggctctcgcctcgcgag 1096782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 11 - 134
Target Start/End: Complemental strand, 9078455 - 9078332
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  ||| |||||||||||||| ||| ||||| ||||||||||||||||||| |||||||||||||||||||||| | || |||    
T  9078455 cagagagcatgcaagatttcgtgattttgacttttgagttgatctttatatgcttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtaga 9078356  T
Q  111 atgagattgaacctggaaagattt 134  Q
    ||||||||||||||||||||||||    
T  9078355 atgagattgaacctggaaagattt 9078332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 12 - 186
Target Start/End: Original strand, 23390115 - 23390290
Alignment:
Q  12 agagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaa 111  Q
    ||||||||| |||||||  ||| |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || || |    
T  23390115 agagagcatccaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagga 23390214  T
Q  112 tgagattgaacctggaaagattttagaattaattttcgtgagttgc--accttaactcgccatggcgagtagaggct 186  Q
    |||||||||||||||||||||| |||||| ||  || ||| | | |  |||| ||||||||||||||||||||||||    
T  23390215 tgagattgaacctggaaagattgtagaatgaaactt-gtgggattctgacctgaactcgccatggcgagtagaggct 23390290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 19660455 - 19660575
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||||||||||||||||| ||| ||||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| ||  ||    
T  19660455 cagagagcatgcaagattttgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtgga 19660554  T
Q  111 atgagattgaacctggaaaga 131  Q
    |||||||| ||||||||||||    
T  19660555 atgagattaaacctggaaaga 19660575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 64 - 249
Target Start/End: Original strand, 21741214 - 21741399
Alignment:
Q  64 ttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaattaattttcgtgagttgcacctta 163  Q
    |||||||||||||||  ||| | || |||| |||||||||||  ||| |||||||||||||||||   ||| ||||  |||||  ||||||||||||| |    
T  21741214 ttttgagtgcctgaacttgtatgatgatgaataggaaagattatagattgagattgaacctggaatagtttaagaacgaatttatgtgagttgcacctga 21741313  T
Q  164 actcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaatgcgatctttgtcgca 249  Q
    ||||||||||||||||||||||||  |||||| |||||||| ||||||| |||  |||||||| |||||| |||||||||||||||    
T  21741314 actcgccatggcgagtagaggctctcgcctcgtgagctaaccagttacataatgtcttgtttaggttaaaagcgatctttgtcgca 21741399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 11 - 140
Target Start/End: Complemental strand, 24529724 - 24529595
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  ||| |||||||||||||| ||| | |||||||||||| |||||||||| |||||||||||||||||||||||| || ||     
T  24529724 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttcagtgcctgaacatgtctaataatgattaggaaagaatgtagg 24529625  T
Q  111 atgagattgaacctggaaagattttagaat 140  Q
    |||||||||||||||||||| || ||||||    
T  24529624 atgagattgaacctggaaaggttgtagaat 24529595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 35 - 216
Target Start/End: Original strand, 36154470 - 36154651
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    ||||||||||| || ||| | |||||||||||||||||| |||| |||||||||||||||||||||||| || ||| |||||||||||||||| ||||||    
T  36154470 ttttgacttttaagttgatccttagatgcttttgagtgcttgaacatgtctaataatgattaggaaagaatgtagagtgagattgaacctggatagattt 36154569  T
Q  135 tagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaat 216  Q
    |||||| ||  || | || |   |||| |||||||||||||||||||||||||  ||||||||||  | ||| |||||||||    
T  36154570 tagaataaaactttgagaatctgacctgaactcgccatggcgagtagaggctctcgcctcgcgagtgacctatttacagaat 36154651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 35 - 199
Target Start/End: Original strand, 11580887 - 11581051
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    |||||||||||||| ||| | ||||| ||||||||||||||||| |||| ||||||||||||||||||| || |||||||||||||||||||| ||||||    
T  11580887 ttttgacttttgagttgatccttagaagcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctggatagattt 11580986  T
Q  135 tagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgag 199  Q
    |||||| ||  || | || |   |||| |||||||||||||||| ||||||||  ||||||||||    
T  11580987 tagaataaaactttgagaatctgacctgaactcgccatggcgagcagaggctctcgcctcgcgag 11581051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 11 - 134
Target Start/End: Complemental strand, 24494071 - 24493948
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  ||| |||||||||||||| ||| | ||| ||||||||||  ||||||| |||||||||||||||||||||||| || ||     
T  24494071 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttaaatgcttttgaacgcctgaacatgtctaataatgattaggaaagaatgtagg 24493972  T
Q  111 atgagattgaacctggaaagattt 134  Q
    ||||||||||||||||||||||||    
T  24493971 atgagattgaacctggaaagattt 24493948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 12 - 134
Target Start/End: Complemental strand, 13095996 - 13095874
Alignment:
Q  12 agagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaa 111  Q
    |||||||||||||||||  ||| |||||||||||||| ||| | ||||||||||||||  ||||||| |||||||||||||||||||||||| || || |    
T  13095996 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgaaagcctgaacatgtctaataatgattaggaaagaatgtagga 13095897  T
Q  112 tgagattgaacctggaaagattt 134  Q
    |||||||| ||||||||||||||    
T  13095896 tgagattggacctggaaagattt 13095874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 8286471 - 8286588
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  |||||||||||||||||| ||| | |||||||| |||||||||| ||| ||||||||||||||||| |||||| || ||     
T  8286471 cagagagcatgcaagatttcgtgtttttgacttttgagttgaaccttagatgcatttgagtgccggaacatgtctaataatgattaagaaagaatgtagg 8286570  T
Q  111 atgagattgaacctggaa 128  Q
    ||||||||||||||||||    
T  8286571 atgagattgaacctggaa 8286588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 55 - 216
Target Start/End: Complemental strand, 22144509 - 22144348
Alignment:
Q  55 tttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaattaattttcgtgagt 154  Q
    |||||||| ||||||||||||||| |||| ||| |||||||||||||||||  ||| |||||||||||||||||  |||| |||||  ||||| | ||||    
T  22144509 tttagatgattttgagtgcctgaacatgtgtaacaatgattaggaaagattctagattgagattgaacctggaataatttaagaatggatttttgggagt 22144410  T
Q  155 tgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaat 216  Q
    | ||||| |||||||||| ||||||||||||||  |||||||||| |  | |||||||||||    
T  22144409 tacacctgaactcgccatagcgagtagaggctctcgcctcgcgagttgcccagttacagaat 22144348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 134
Target Start/End: Complemental strand, 25422035 - 25421912
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  ||| |||||||||||||| ||| | ||||||||||||||||||||||| ||||||| ||||||||||||||||    ||     
T  25422035 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctattaatgattaggaaagaacttagg 25421936  T
Q  111 atgagattgaacctggaaagattt 134  Q
    ||||||||| ||||||||||||||    
T  25421935 atgagattggacctggaaagattt 25421912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 11 - 128
Target Start/End: Complemental strand, 22075511 - 22075394
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  ||| |||||||||||||| ||| | ||||||||||||||||||||||| ||||||||||||||||||| |||| || ||     
T  22075511 cagagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggtaagaatgtagg 22075412  T
Q  111 atgagattgaacctggaa 128  Q
    |||| | |||||||||||    
T  22075411 atgaaaatgaacctggaa 22075394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 134
Target Start/End: Complemental strand, 25431897 - 25431774
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||||||| |||||||||  ||| |||||||||||||| ||| | ||||||||||||||||||||||| |||| || |||||||||||||||| |  ||     
T  25431897 cagagagcgtgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttattaatgattaggaaagaatttagg 25431798  T
Q  111 atgagattgaacctggaaagattt 134  Q
    ||||||||| ||||||||||||||    
T  25431797 atgagattggacctggaaagattt 25431774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 12 - 134
Target Start/End: Complemental strand, 13025812 - 13025690
Alignment:
Q  12 agagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaa 111  Q
    |||||||||||||||||  ||| |||||| ||||||| ||| | |||||| |||||||  ||||||| |||||||||||||||||||||||| || || |    
T  13025812 agagagcatgcaagatttcgtgattttgaattttgagttgatccttagatacttttgaaagcctgaacatgtctaataatgattaggaaagaatgtagga 13025713  T
Q  112 tgagattgaacctggaaagattt 134  Q
    |||||||| ||||||||||||||    
T  13025712 tgagattggacctggaaagattt 13025690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 34 - 128
Target Start/End: Original strand, 21292622 - 21292716
Alignment:
Q  34 tttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaa 128  Q
    ||||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||| ||||||||||| || || ||||||||||||||||||    
T  21292622 tttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataataattaggaaagaatgtaggatgagattgaacctggaa 21292716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 125
Target Start/End: Original strand, 22107002 - 22107116
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||||||||||||| |||  || ||||||||||||||| ||| |||||||||| |||||||||||||| |||||||||| ||||||||||||| || ||     
T  22107002 cagagagcatgcaaaatttcgtatttttgacttttgagttgaactttagatgcgtttgagtgcctgaacatgtctaatattgattaggaaagaatgtagg 22107101  T
Q  111 atgagattgaacctg 125  Q
    | |||||||||||||    
T  22107102 acgagattgaacctg 22107116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 249
Target Start/End: Original strand, 24766955 - 24767192
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||| |||||||||||||   || ||| |||||||||| ||| | |||||||| |||||||||||||| |||||||||| |||||| |||||| || ||     
T  24766955 cagatagcatgcaagatttcatgatttcgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattacgaaagaatgtagg 24767054  T
Q  111 atgagattgaacctggaaagattttagaat-taattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactag-- 207  Q
    ||||||||||| |||||||||  |||||||  || ||| | || |   | || |||||| ||||||||| ||||||||  |||||||||||  |||||      
T  24767055 atgagattgaatctggaaaga-cttagaatgaaactttggagaatctga-ctgaactcgtcatggcgagcagaggctctcgcctcgcgagc--actagta 24767150  T
Q  208 ttacagaataccttgtttatgttaaatgcgatctttgtcgca 249  Q
    ||||||||| ||||||||| |||||||| |||||||||||||    
T  24767151 ttacagaatgccttgtttaggttaaatgtgatctttgtcgca 24767192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 54 - 246
Target Start/End: Original strand, 26011695 - 26011886
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaattaattttcgtgag 153  Q
    ||||||||| || |||||| || || |||| |||||||||||| ||||||||  | | |||||||||||||||||   ||| |||||  ||||| | |||    
T  26011695 ctttagatgattatgagtgtctaaacatgtgtaataatgattaagaaagattctaaattgagattgaacctggaatagtttaagaatggatttttgggag 26011794  T
Q  154 ttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaatgcgatctttgtc 246  Q
    || ||||| |||||||||||||||||||||||    |||||||||| |  ||||||||||||| | ||| ||| |||||||| ||||||||||    
T  26011795 ttacacctgaactcgccatggcgagtagaggccttcgcctcgcgagttgtctagttacagaatgctttg-ttaggttaaatgtgatctttgtc 26011886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 128
Target Start/End: Original strand, 21498683 - 21498752
Alignment:
Q  59 gatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaa 128  Q
    |||| ||||||||||||||| |||| ||||||| ||||||| |||||| ||| |||||||||||||||||    
T  21498683 gatgtttttgagtgcctgaacatgtataataattattaggagagattgtagattgagattgaacctggaa 21498752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 96
Target Start/End: Complemental strand, 37724403 - 37724319
Alignment:
Q  12 agagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 96  Q
    |||||||||| ||||||||||  |||||||||||||| ||| | ||||||| ||||||||||||||| ||| ||| ||| |||||    
T  37724403 agagagcatgtaagattctgtaattttgacttttgagttgaaccttagatgtttttgagtgcctgaagatgcctattaaagatta 37724319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 75
Target Start/End: Complemental strand, 31342602 - 31342539
Alignment:
Q  12 agagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcct 75  Q
    ||||||||||  | ||||||||||||||||||||||| ||| | ||||||||||||||||||||    
T  31342602 agagagcatgtcaaattctgtgtttttgacttttgagttgaaccttagatgcttttgagtgcct 31342539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 122
Target Start/End: Original strand, 20026524 - 20026592
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaac 122  Q
    ||||||||| ||||||||||||||| |||| |||||||||||||| ||| ||  ||| |||||||||||    
T  20026524 ctttagatgattttgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaac 20026592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 57 - 125
Target Start/End: Original strand, 22177807 - 22177875
Alignment:
Q  57 tagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctg 125  Q
    |||||| |||||||||||||||||||| |||||||||||||| ||| ||  ||| |||| |||||||||    
T  22177807 tagatgattttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagtttgaacctg 22177875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 96
Target Start/End: Complemental strand, 22032801 - 22032731
Alignment:
Q  26 attctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 96  Q
    ||||||| ||||||||||||||| ||| | |||||||||||||||||||| || |||| || ||| |||||    
T  22032801 attctgtatttttgacttttgagttgaaccttagatgcttttgagtgcctaaagatgtttattaaagatta 22032731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 23201869 - 23201784
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 96  Q
    ||||||||||| |  |||||||  |||||||||||||| ||| | ||||||| ||||||||||||||| ||| ||| ||| |||||    
T  23201869 cagagagcatgtagaattctgtacttttgacttttgagttgaaccttagatgtttttgagtgcctgaagatgcctattaaagatta 23201784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 83
Target Start/End: Complemental strand, 14079648 - 14079576
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgt 83  Q
    ||||||||||| |  ||||||| ||||||||||||||| | | | ||||||| |||||||||||| |||||||    
T  14079648 cagagagcatgtagaattctgtatttttgacttttgagttcaaccttagatgtttttgagtgcctaaatatgt 14079576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 122
Target Start/End: Complemental strand, 15796957 - 15796889
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaac 122  Q
    ||||||||| ||||||||||| |||||||| ||| |||||||||| ||| ||  ||| |||||||||||    
T  15796957 ctttagatggttttgagtgccagaatatgtataagaatgattaggcaagtttttagactgagattgaac 15796889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 249
Target Start/End: Original strand, 21501918 - 21502008
Alignment:
Q  157 caccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaatgcgatctttgtcgca 249  Q
    ||||| |||||||||| ||||||||||||||  |||||||||| || | |||| |||||| ||||| ||  |||||||||||| |||||||||    
T  21501918 cacctgaactcgccatagcgagtagaggctctcgcctcgcgagttacccagtt-cagaatgccttg-ttgggttaaatgcgatatttgtcgca 21502008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 26742376 - 26742436
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagt 71  Q
    ||||||||||| || |||||| |||||||||||||||| ||| | |||||||| |||||||    
T  26742376 cagagagcatgtaaaattctgagtttttgacttttgagttgaaccttagatgcctttgagt 26742436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 97
Target Start/End: Original strand, 21366300 - 21366371
Alignment:
Q  26 attctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 97  Q
    |||||||  |||||||||||||| ||| | |||||||||||||||||||| || |||| || ||| ||||||    
T  21366300 attctgtaattttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttattaaagattag 21366371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 122
Target Start/End: Complemental strand, 25744257 - 25744190
Alignment:
Q  55 tttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaac 122  Q
    |||||||| |||||||||||||||||||| ||| |||||||||| ||  ||  ||| |||||||||||    
T  25744257 tttagatggttttgagtgcctgaatatgtataagaatgattaggtaaatttttagactgagattgaac 25744190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 96
Target Start/End: Original strand, 18769638 - 18769708
Alignment:
Q  26 attctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 96  Q
    ||||||| |||||||||||| || ||| | |||||||||||||||||||| || |||| || ||| |||||    
T  18769638 attctgtatttttgacttttaagttgaaccttagatgcttttgagtgcctaaagatgtttattaaagatta 18769708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 200
Target Start/End: Complemental strand, 25744072 - 25744035
Alignment:
Q  163 aactcgccatggcgagtagaggctcctgcctcgcgagc 200  Q
    |||||||||||||||||||||||||  |||||||||||    
T  25744072 aactcgccatggcgagtagaggctctcgcctcgcgagc 25744035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 202
Target Start/End: Complemental strand, 4398059 - 4398019
Alignment:
Q  162 taactcgccatggcgagtagaggctcctgcctcgcgagcta 202  Q
    ||||||||| ||||||||||||||||  |||||||||||||    
T  4398059 taactcgccgtggcgagtagaggctctcgcctcgcgagcta 4398019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 16255703 - 16255743
Alignment:
Q  162 taactcgccatggcgagtagaggctcctgcctcgcgagcta 202  Q
    ||||||||| ||||||||||||||||  |||||||||||||    
T  16255703 taactcgccgtggcgagtagaggctctcgcctcgcgagcta 16255743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 16259336 - 16259376
Alignment:
Q  162 taactcgccatggcgagtagaggctcctgcctcgcgagcta 202  Q
    ||||||||| ||||||||||||||||  |||||||||||||    
T  16259336 taactcgccgtggcgagtagaggctctcgcctcgcgagcta 16259376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 17918805 - 17918845
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcct 75  Q
    |||||||||||||| ||| | ||||||||||||||||||||    
T  17918805 ttttgacttttgagttgaaccttagatgcttttgagtgcct 17918845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 20910430 - 20910490
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagt 71  Q
    ||||||||||||||||||  ||| |||||||||||||| ||| | |||||||  |||||||    
T  20910430 cagagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgtctttgagt 20910490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 22589500 - 22589540
Alignment:
Q  162 taactcgccatggcgagtagaggctcctgcctcgcgagcta 202  Q
    ||||||||| ||||||||||||||||  |||||||||||||    
T  22589500 taactcgccgtggcgagtagaggctctcgcctcgcgagcta 22589540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 22593055 - 22593095
Alignment:
Q  162 taactcgccatggcgagtagaggctcctgcctcgcgagcta 202  Q
    ||||||||| ||||||||||||||||  |||||||||||||    
T  22593055 taactcgccgtggcgagtagaggctctcgcctcgcgagcta 22593095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 22596610 - 22596650
Alignment:
Q  162 taactcgccatggcgagtagaggctcctgcctcgcgagcta 202  Q
    ||||||||| ||||||||||||||||  |||||||||||||    
T  22596610 taactcgccgtggcgagtagaggctctcgcctcgcgagcta 22596650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 202
Target Start/End: Complemental strand, 22880559 - 22880519
Alignment:
Q  162 taactcgccatggcgagtagaggctcctgcctcgcgagcta 202  Q
    ||||||||| ||||||||||||||||  |||||||||||||    
T  22880559 taactcgccgtggcgagtagaggctctcgcctcgcgagcta 22880519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 202
Target Start/End: Complemental strand, 23693809 - 23693769
Alignment:
Q  162 taactcgccatggcgagtagaggctcctgcctcgcgagcta 202  Q
    ||||||||| ||||||||||||||||  |||||||||||||    
T  23693809 taactcgccgtggcgagtagaggctctcgcctcgcgagcta 23693769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 26360853 - 26360893
Alignment:
Q  162 taactcgccatggcgagtagaggctcctgcctcgcgagcta 202  Q
    ||||||||| ||||||||||||||||  |||||||||||||    
T  26360853 taactcgccgtggcgagtagaggctctcgcctcgcgagcta 26360893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 98
Target Start/End: Original strand, 26732419 - 26732463
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattagg 98  Q
    ||||||||| ||||||||||||||| |||| ||| ||||||||||    
T  26732419 ctttagatgattttgagtgcctgaacatgtataagaatgattagg 26732463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 98
Target Start/End: Original strand, 26740232 - 26740276
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattagg 98  Q
    ||||||||| ||||||||||||||| |||| ||| ||||||||||    
T  26740232 ctttagatgattttgagtgcctgaacatgtataagaatgattagg 26740276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 202
Target Start/End: Complemental strand, 43121514 - 43121474
Alignment:
Q  162 taactcgccatggcgagtagaggctcctgcctcgcgagcta 202  Q
    ||||||||| ||||||||||||||||  |||||||||||||    
T  43121514 taactcgccgtggcgagtagaggctctcgcctcgcgagcta 43121474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 202
Target Start/End: Complemental strand, 43125047 - 43125007
Alignment:
Q  162 taactcgccatggcgagtagaggctcctgcctcgcgagcta 202  Q
    ||||||||| ||||||||||||||||  |||||||||||||    
T  43125047 taactcgccgtggcgagtagaggctctcgcctcgcgagcta 43125007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 143; Significance: 3e-75; HSPs: 2)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 35 - 249
Target Start/End: Complemental strand, 7290 - 7076
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    |||||||||||||| ||| | ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7290 ttttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 7191  T
Q  135 tagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaat 234  Q
    |||||| |||||| ||||  || |||| |||||||||||||||||||||||||  |||| |||||||||||||||||||||| ||||||||| |||||||    
T  7190 tagaatgaatttttgtgaactgaacctgaactcgccatggcgagtagaggctctcgccttgcgagctaactagttacagaatgccttgtttaggttaaat 7091  T
Q  235 gcgatctttgtcgca 249  Q
    |||||  ||||||||    
T  7090 gcgattcttgtcgca 7076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 64 - 199
Target Start/End: Complemental strand, 8466 - 8331
Alignment:
Q  64 ttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaattaattttcgtgagttgcacctta 163  Q
    ||||| ||| |||||||||| ||||||||||||| |||||||  ||| |||||||||||||||||   ||| |||||  ||||| | ||||| ||||| |    
T  8466 ttttgggtgtctgaatatgtgtaataatgattagaaaagattctagattgagattgaacctggaatagtttaagaatggatttttgggagttacacctga 8367  T
Q  164 actcgccatggcgagtagaggctcctgcctcgcgag 199  Q
    |||||||||||||||| ||||| |  ||||||||||    
T  8366 actcgccatggcgagtggaggccctcgcctcgcgag 8331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 143; Significance: 3e-75; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 35 - 249
Target Start/End: Complemental strand, 44014653 - 44014439
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    |||||||||||||| |||   ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44014653 ttttgacttttgagttgatacttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 44014554  T
Q  135 tagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaat 234  Q
    |||||| |||||| || |||||||||| |||||||||||| ||||||||||||  |||||||||||||||  |||||||||| ||||||||| |||||||    
T  44014553 tagaatgaatttttgttagttgcacctgaactcgccatggtgagtagaggctctcgcctcgcgagctaaccggttacagaatgccttgtttaggttaaat 44014454  T
Q  235 gcgatctttgtcgca 249  Q
    |||||| ||||||||    
T  44014453 gcgatcattgtcgca 44014439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 35 - 248
Target Start/End: Original strand, 810771 - 810984
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    |||||||||||||| ||| | ||||||| ||||||||||||||| || |||||||||||||||||||||||||||||| |||||||||||||||||| ||    
T  810771 ttttgacttttgagttgatccttagatgtttttgagtgcctgaacatatctaataatgattaggaaagattggagaataagattgaacctggaaagaatt 810870  T
Q  135 tagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaacta-gttacagaataccttgtttatgttaaa 233  Q
    |||||| |||||| ||||  || |||| |||||||||||||||||||||||||  |||||||||| ||  || |||||| ||| ||||||||| ||||||    
T  810871 tagaatgaatttttgtgaactgtacctgaactcgccatggcgagtagaggctctcgcctcgcgag-tacttatgttacaaaatgccttgtttaagttaaa 810969  T
Q  234 tgcgatctttgtcgc 248  Q
    |||||||||||||||    
T  810970 tgcgatctttgtcgc 810984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 35 - 249
Target Start/End: Complemental strand, 68225 - 68011
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    |||||||||||||| ||| | ||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  ||||    
T  68225 ttttgacttttgagttgatccttaaatgttttcgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaataattt 68126  T
Q  135 tagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaat 234  Q
     ||||  || ||  | ||||| ||  | |||||||||||||||||||||||||  ||||||||||||||| ||||||||||| ||||||||| |||||||    
T  68125 aagaacaaacttgtgggagttacagatgaactcgccatggcgagtagaggctctcgcctcgcgagctaaccagttacagaatgccttgtttaggttaaat 68026  T
Q  235 gcgatctttgtcgca 249  Q
    |||||| ||||||||    
T  68025 gcgatccttgtcgca 68011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 12 - 134
Target Start/End: Complemental strand, 38227982 - 38227860
Alignment:
Q  12 agagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaa 111  Q
    |||||||||||||||||  ||| |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||||    
T  38227982 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaa 38227883  T
Q  112 tgagattgaacctggaaagattt 134  Q
    |||||||||||||||||||||||    
T  38227882 tgagattgaacctggaaagattt 38227860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 35 - 246
Target Start/End: Original strand, 9389337 - 9389548
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    ||||||||||| || ||| | || |||| ||||||||| ||| |  ||| |||| ||||||||||||||||| ||| |||||||||||||||||   |||    
T  9389337 ttttgacttttaagttgaaccttggatgtttttgagtgtctggacttgtataatgatgattaggaaagattgtagattgagattgaacctggaatagttt 9389436  T
Q  135 tagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaat 234  Q
     ||||  |||||  ||||||| || || |||||||||||||||||||||||||  ||||||||||||||  ||||||||||| ||||||||| ||||||     
T  9389437 aagaacgaatttatgtgagttacagctgaactcgccatggcgagtagaggctctcgcctcgcgagctaagcagttacagaatgccttgtttaggttaaaa 9389536  T
Q  235 gcgatctttgtc 246  Q
    ||||||||||||    
T  9389537 gcgatctttgtc 9389548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 11 - 140
Target Start/End: Complemental strand, 9509692 - 9509563
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||   || |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||     
T  9509692 cagagagcatgcaagatttcatgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 9509593  T
Q  111 atgagattgaacctggaaagattttagaat 140  Q
    ||||||||||||||||||||||| ||||||    
T  9509592 atgagattgaacctggaaagattgtagaat 9509563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 35 - 216
Target Start/End: Original strand, 17061602 - 17061783
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| |||| ||||||||||||||||||| || |||||||||||||||||||| ||||||    
T  17061602 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctggatagattt 17061701  T
Q  135 tagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaat 216  Q
    |||||| ||  || | || |   |||| ||||||| |||||||||||||||||  ||||||||||  | ||| |||||||||    
T  17061702 tagaataaaactttgagaatctgacctgaactcgcgatggcgagtagaggctctcgcctcgcgagtgacctatttacagaat 17061783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 35 - 247
Target Start/End: Complemental strand, 47832287 - 47832076
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    ||||||| ||| || ||| | ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| | |||||||| ||||||   |||    
T  47832287 ttttgacctttaagttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattaagattgaatctggaatagttt 47832188  T
Q  135 tagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaat 234  Q
     ||||  |||||| | ||||| ||| | ||||||||||||||||||||||| |  ||||||||| ||  | ||||||||||| | ||||||| |||||||    
T  47832187 aagaacgaatttt-gagagttacacatgaactcgccatggcgagtagaggccctcgcctcgcgaactgcccagttacagaatgctttgtttaggttaaat 47832089  T
Q  235 gcgatctttgtcg 247  Q
    | |||||||||||    
T  47832088 gtgatctttgtcg 47832076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 56 - 199
Target Start/End: Original strand, 15143700 - 15143843
Alignment:
Q  56 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaattaattttcgtgagtt 155  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| || ||| |||| |     
T  15143700 ttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagattttagaatgagattgaacctggaaagattttagaatgaacttttgtgattc 15143799  T
Q  156 gcaccttaactcgccatggcgagtagaggctcctgcctcgcgag 199  Q
      ||||  ||||||||||||||| ||||||||  ||||||||||    
T  15143800 tgacctgtactcgccatggcgagcagaggctctcgcctcgcgag 15143843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 11 - 249
Target Start/End: Original strand, 39267264 - 39267501
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||||||||||||||||| |||| |||||||||||||| ||| | ||| |||| |||||||||||||| |||||||||| ||||||||||||| || ||     
T  39267264 cagagagcatgcaagattttgtgattttgacttttgagttgaaccttatatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtagg 39267363  T
Q  111 atgagattgaacctggaaagattttagaat-taattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactag-- 207  Q
    |||||||||||||||||||||  |||||||  || ||| | || |   | || |||||||||||||||| ||||||||  |||||| ||||  |||||      
T  39267364 atgagattgaacctggaaaga-cttagaatgaaactttggagaatctga-ctgaactcgccatggcgagcagaggctctcgcctcgggagc--actagta 39267459  T
Q  208 ttacagaataccttgtttatgttaaatgcgatctttgtcgca 249  Q
    ||||||||| ||||||||| |||||||| |||||||||||||    
T  39267460 ttacagaatgccttgtttaggttaaatgtgatctttgtcgca 39267501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 11 - 133
Target Start/End: Complemental strand, 12699335 - 12699213
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  ||| |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||     
T  12699335 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 12699236  T
Q  111 atgagattgaacctggaaagatt 133  Q
    |||| ||||||||||||||||||    
T  12699235 atgaaattgaacctggaaagatt 12699213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 35 - 249
Target Start/End: Original strand, 16219358 - 16219571
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    ||||||| ||| || ||| | ||||||| ||||||||| || ||  ||| |||||||||||||||||||||  ||| |||||||||||||||||   |||    
T  16219358 ttttgacctttaagttgaaccttagatgtttttgagtgtctaaacttgtataataatgattaggaaagattttagattgagattgaacctggaatagttt 16219457  T
Q  135 tagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaat 234  Q
     ||||| |||||| | ||||| ||| | ||||||||||||||||||||||| |  |||||||||| |  ||||||||||||| ||||| ||| |||||||    
T  16219458 aagaatgaatttttgggagttacacgtgaactcgccatggcgagtagaggccctcgcctcgcgagttgtctagttacagaatgccttg-ttaggttaaat 16219556  T
Q  235 gcgatctttgtcgca 249  Q
    |||||||||||||||    
T  16219557 gcgatctttgtcgca 16219571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 16385876 - 16385993
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||||||||||||||||| |||  |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||     
T  16385876 cagagagcatgcaagattttgtaattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 16385975  T
Q  111 atgagattgaacctggaa 128  Q
    ||||||||||||||||||    
T  16385976 atgagattgaacctggaa 16385993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 28504919 - 28505039
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||||||||||||||||| |||  |||||||||||||| ||| | ||||||| ||||||||||||||| |||||||||||||||||||||||| || |||    
T  28504919 cagagagcatgcaagattttgtaattttgacttttgagttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 28505018  T
Q  111 atgagattgaacctggaaaga 131  Q
    ||||||||||||||| |||||    
T  28505019 atgagattgaacctgaaaaga 28505039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 11 - 249
Target Start/End: Original strand, 9751168 - 9751405
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  ||| |||||||||||||| ||| | |||||||| |||||||||||||| |||||||||| ||||||||||||| || ||     
T  9751168 cagagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtagg 9751267  T
Q  111 atgagattgaacctggaaagattttagaat-taattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagtt 209  Q
    ||||| |||||||||||||||  |||||||  || ||| | || ||  | || |||||||||||| ||| ||||||||  |||||||||||      |||    
T  9751268 atgaggttgaacctggaaaga-cttagaatgaaactttggagaatttga-ctgaactcgccatggtgagcagaggctctcgcctcgcgagcgcttgtgtt 9751365  T
Q  210 acagaataccttgtttatgttaaatgcgatctttgtcgca 249  Q
    ||||||| |||||||||  |||||||||||||||||||||    
T  9751366 acagaatgccttgtttagtttaaatgcgatctttgtcgca 9751405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 249
Target Start/End: Original strand, 2831924 - 2832160
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  ||| |||||||||||||| ||| | |||||||| |||||||||||||| |||||||||| ||||||||||||| || ||     
T  2831924 cagagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtagg 2832023  T
Q  111 atgagattgaacctggaaagattttagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactag--t 208  Q
    |||||||||||||| ||||||  ||||||| || ||| | || |   | || ||||| |||||||||| ||||||||  |||||||||||  |||||  |    
T  2832024 atgagattgaacctagaaaga-cttagaatgaactttggagaatctga-ctgaactcaccatggcgagcagaggctctcgcctcgcgagc--actagtat 2832119  T
Q  209 tacagaataccttgtttatgttaaatgcgatctttgtcgca 249  Q
    ||||||||  |||||||| |||||||| |||| ||||||||    
T  2832120 tacagaatgtcttgtttaggttaaatgtgatccttgtcgca 2832160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 129
Target Start/End: Original strand, 15754505 - 15754623
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  |  ||||||||||||||| ||| | ||||||||||||||||||||||| ||||||||||||||||||||||||  | |||    
T  15754505 cagagagcatgcaagatttcgaatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaaagtaga 15754604  T
Q  111 atgagattgaacctggaaa 129  Q
    |||||||||||||||||||    
T  15754605 atgagattgaacctggaaa 15754623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 11 - 140
Target Start/End: Original strand, 3563982 - 3564111
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||||||| |||||||||  ||  |||||||||||||| |||   ||||||||||||||||||||||| |||||||||||||||||||||||| || ||     
T  3563982 cagagagcttgcaagatttcgttattttgacttttgagttgattcttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 3564081  T
Q  111 atgagattgaacctggaaagattttagaat 140  Q
    ||||||||||||||||||||||| ||||||    
T  3564082 atgagattgaacctggaaagattgtagaat 3564111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 64 - 249
Target Start/End: Complemental strand, 22073366 - 22073182
Alignment:
Q  64 ttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaattaattttcgtgagttgcacctta 163  Q
    ||||||||||||||| |||| ||||||||||||| |||||||  ||||||||||||||||| |||   ||| |||||  ||||| | ||||| ||||| |    
T  22073366 ttttgagtgcctgaacatgtgtaataatgattagaaaagattctagaatgagattgaacctagaatagtttaagaatggatttttgggagttacacctga 22073267  T
Q  164 actcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaatgcgatctttgtcgca 249  Q
    |||||||||||||||||||||| |  |||||||||| || | ||||||||||| | ||| ||| ||||||||||||| ||||||||    
T  22073266 actcgccatggcgagtagaggccctcgcctcgcgagttacccagttacagaatgctttg-ttaggttaaatgcgatccttgtcgca 22073182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 55 - 216
Target Start/End: Original strand, 12255453 - 12255614
Alignment:
Q  55 tttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaattaattttcgtgagt 154  Q
    |||||||| |||||||||| |||| |||| |||||||||||||||||||||  ||| |||||||||||||||||   ||| ||||| |||||| | ||||    
T  12255453 tttagatgattttgagtgcttgaacatgtataataatgattaggaaagattctagattgagattgaacctggaatagtttaagaatgaatttttgggagt 12255552  T
Q  155 tgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaat 216  Q
    | ||||| |||||||||| ||||||||||||||  |||||||||| |  | |||||||||||    
T  12255553 tacacctgaactcgccatagcgagtagaggctctcgcctcgcgagtttcccagttacagaat 12255614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 27847462 - 27847579
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  || ||||||||||||||| ||| | ||||||||||||||||||||||| ||||||||| |||||||||||||| |  ||     
T  27847462 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaattatgattaggaaagaatttagg 27847561  T
Q  111 atgagattgaacctggaa 128  Q
    ||||||||||||||||||    
T  27847562 atgagattgaacctggaa 27847579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 11 - 128
Target Start/End: Complemental strand, 40443880 - 40443763
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||| |||||||||||||  || ||||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| |  ||     
T  40443880 cagaaagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttagg 40443781  T
Q  111 atgagattgaacctggaa 128  Q
    ||||||||||||||||||    
T  40443780 atgagattgaacctggaa 40443763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 54 - 245
Target Start/End: Complemental strand, 16056788 - 16056598
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaattaattttcgtgag 153  Q
    |||||| || ||||| || |||||| |||| ||||||||| |||||||||||  ||| |||||||||||||||||   ||| |||||  ||||| | ||     
T  16056788 ctttaggtgattttgtgtacctgaacatgtataataatgaataggaaagattttagattgagattgaacctggaatagtttaagaatggatttttgggaa 16056689  T
Q  154 ttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaatgcgatctttgt 245  Q
    || ||||| |||||||||| ||||||||||||||  |||||||||| || | ||||||||||| ||||| ||| ||||||||||||||||||    
T  16056688 ttacacctgaactcgccatagcgagtagaggctctcgcctcgcgagttacccagttacagaatgccttg-ttaggttaaatgcgatctttgt 16056598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 35 - 199
Target Start/End: Original strand, 12756359 - 12756522
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| |||| ||||||||||||||||||| || ||||||||||||||||||| |  ||||    
T  12756359 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctgg-attattt 12756457  T
Q  135 tagaattaa-ttttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgag 199  Q
     ||||| || |||| |  || || |||| ||||| |||||||||||||||||||  ||||||||||    
T  12756458 aagaatgaactttttggaagctg-acctgaactcaccatggcgagtagaggctctcgcctcgcgag 12756522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 34201286 - 34201166
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  || ||||||||||||||| ||| | ||||||||||||||||| ||||| ||||||||||||||| | |||||| |  |||    
T  34201286 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgtctgaacatgtctaataatgatcaagaaagaatttaga 34201187  T
Q  111 atgagattgaacctggaaaga 131  Q
    ||||||||||||||| |||||    
T  34201186 atgagattgaacctgtaaaga 34201166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 11 - 128
Target Start/End: Complemental strand, 26212488 - 26212371
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||||||||||||||||| |||  |||||||||||||| ||| | |||||||| |||||||||||||| |||||||||| | |||||| |||| || ||     
T  26212488 cagagagcatgcaagattttgtaattttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatatttattaggtaagaatgtagg 26212389  T
Q  111 atgagattgaacctggaa 128  Q
    ||||||||||||||||||    
T  26212388 atgagattgaacctggaa 26212371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 11 - 103
Target Start/End: Original strand, 11995676 - 11995768
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaaga 103  Q
    ||||||||||||||||||  || ||||||||||||||| ||| | ||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  11995676 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaaga 11995768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 18302681 - 18302561
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  ||  |||||||||||||| ||| | ||||||||  ||||||||||||| |||||||||| | ||||||||||| || ||     
T  18302681 cagagagcatgcaagatttcgtaattttgacttttgagttgaaccttagatgcccttgagtgcctgaacatgtctaatatttattaggaaagaatgtagg 18302582  T
Q  111 atgagattgaacctggaaaga 131  Q
    |||||||||||||||||||||    
T  18302581 atgagattgaacctggaaaga 18302561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 35 - 199
Target Start/End: Complemental strand, 44116983 - 44116820
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    |||||||| ||||| ||| | ||| |||| ||||||| |||||| |||||||||||||||||||||||| || |||||||||||||||| ||||||| ||    
T  44116983 ttttgactcttgagttgatccttatatgcctttgagtccctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacccggaaaga-tt 44116885  T
Q  135 tagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgag 199  Q
    |||||| ||  || | || |   |||| |||||||||||||||| ||||||||  ||||||||||    
T  44116884 tagaatgaaactttgggaatctgacctgaactcgccatggcgagcagaggctctcgcctcgcgag 44116820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 64 - 249
Target Start/End: Complemental strand, 16324456 - 16324272
Alignment:
Q  64 ttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaattaattttcgtgagttgcacctta 163  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||  |||||||||||||||||   ||| ||||  |||||| | |||||  |    |    
T  16324456 ttttgagtgcttgaacatgtctaataatgattaggaaagattggagtttgagattgaacctggaatagtttaagaacgaatttttgagagttagattgga 16324357  T
Q  164 actcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaatgcgatctttgtcgca 249  Q
    |||||||||||||||||||||| |  |||| |||| ||  | ||||||||||| ||||| ||| |||||||| |||| ||||||||    
T  16324356 actcgccatggcgagtagaggccctcgccttgcgaactgcccagttacagaatgccttg-ttaggttaaatgtgatccttgtcgca 16324272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 35 - 249
Target Start/End: Complemental strand, 18006120 - 18005913
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    |||||||||||||| ||| | ||||||| ||||||||||||||| ||||||||||||||||| ||||||||      |||||||||||||  ||   |||    
T  18006120 ttttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattatgaaagatt------tgagattgaacctaaaatagttt 18006027  T
Q  135 tagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaat 234  Q
     ||||  || ||  | |||||  |||| ||||||||||||||| ||||||| |  |||||||||  | |||||||||| ||| ||||||||| | | |||    
T  18006026 aagaacgaacttgtgggagttatacctgaactcgccatggcgactagaggccctcgcctcgcgaattgactagttacaaaatgccttgtttaggat-aat 18005928  T
Q  235 gcgatctttgtcgca 249  Q
    |||||||||||||||    
T  18005927 gcgatctttgtcgca 18005913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 55 - 216
Target Start/End: Original strand, 2279780 - 2279941
Alignment:
Q  55 tttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaattaattttcgtgagt 154  Q
    |||||||| ||||||||||||||| |||  |||||||||||||||||||||  ||| |||||||||||||| ||   ||| |||||  ||||| | | ||    
T  2279780 tttagatgattttgagtgcctgaacatgcataataatgattaggaaagattttagattgagattgaacctgtaatagtttaagaatggatttttgggtgt 2279879  T
Q  155 tgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaat 216  Q
    | ||||| |||||||||| |||||||||||| |  |||||||||| |  ||||||| |||||    
T  2279880 tacacctgaactcgccatagcgagtagaggccctcgcctcgcgagttgcctagttatagaat 2279941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 11 - 187
Target Start/End: Original strand, 21064780 - 21064956
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||||||| ||||||||| |||| ||||||  | |||| | | | ||||||| || |||| ||||||| ||||  |||||||||||||||| |||  |||    
T  21064780 cagagagcttgcaagattttgtgattttgagctgtgagtttaaccttagatgtttatgagggcctgaacatgtacaataatgattaggaaatattttaga 21064879  T
Q  111 atgagattgaacctggaaagattttagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctc 187  Q
    |||||||||||| |||||   | | |||||  ||||| | | |||  ||||||||||||||||||||||||||||||    
T  21064880 atgagattgaacttggaatagtgtcagaatggatttttgagtgttttaccttaactcgccatggcgagtagaggctc 21064956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 57 - 126
Target Start/End: Complemental strand, 14045281 - 14045212
Alignment:
Q  57 tagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctgg 126  Q
    |||||| |||||||||||||||||||| |||||||||||||| ||| ||  ||| |||||||||||||||    
T  14045281 tagatgtttttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacctgg 14045212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 57 - 126
Target Start/End: Complemental strand, 14355311 - 14355242
Alignment:
Q  57 tagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctgg 126  Q
    |||||| |||||||||||||||||||| |||||||||||||| ||| ||  ||| |||||||||||||||    
T  14355311 tagatgtttttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacctgg 14355242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 1867650 - 1867719
Alignment:
Q  57 tagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctgg 126  Q
    |||||| |||| ||||||||||||||| |||||||||||||| ||| ||  ||| |||||||||||||||    
T  1867650 tagatgttttttagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacctgg 1867719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 125
Target Start/End: Original strand, 2529640 - 2529709
Alignment:
Q  56 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctg 125  Q
    ||||||| |||||||||||||||||||| |||||||||||||| ||| ||  ||| |||||||| |||||    
T  2529640 ttagatgattttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattggacctg 2529709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 10508701 - 10508786
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 96  Q
    ||||||||||| |  ||||||| ||||||||||||||| ||| | ||||||| ||||||||||||||| ||| ||| ||| |||||    
T  10508701 cagagagcatgtagaattctgtatttttgacttttgagttgaaccttagatgtttttgagtgcctgaagatgcctattaaagatta 10508786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 24054969 - 24054884
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 96  Q
    ||||| |||||||||||| |||  |||||||||||||| ||| | ||||||| ||||||||||||||| |||| || ||| |||||    
T  24054969 cagagtgcatgcaagattttgtagttttgacttttgagttgaaccttagatgtttttgagtgcctgaagatgtatattaaagatta 24054884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 122
Target Start/End: Original strand, 17017052 - 17017120
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaac 122  Q
    ||||||||| ||||||||||||||||||||  ||||||||||||| ||| ||  ||| |||||||||||    
T  17017052 ctttagatgattttgagtgcctgaatatgtacaataatgattaggcaagtttttagattgagattgaac 17017120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 124
Target Start/End: Complemental strand, 14036731 - 14036664
Alignment:
Q  57 tagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacct 124  Q
    |||||| ||||||||||||||||||||  ||||||||||||| ||| ||  ||| |||||||||||||    
T  14036731 tagatgtttttgagtgcctgaatatgtaaaataatgattaggcaagtttttagattgagattgaacct 14036664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 124
Target Start/End: Complemental strand, 14346761 - 14346694
Alignment:
Q  57 tagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacct 124  Q
    |||||| ||||||||||||||||||||  ||||||||||||| ||| ||  ||| |||||||||||||    
T  14346761 tagatgtttttgagtgcctgaatatgtaaaataatgattaggcaagtttttagattgagattgaacct 14346694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 97
Target Start/End: Original strand, 17137697 - 17137768
Alignment:
Q  26 attctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 97  Q
    ||||||| ||||||||||||||| ||| | |||||||||||||||||||| || |||| || ||| ||||||    
T  17137697 attctgtatttttgacttttgagttgaaccttagatgcttttgagtgcctaaagatgtttattaaagattag 17137768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 78
Target Start/End: Original strand, 19649103 - 19649170
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaa 78  Q
    ||||||||||||||||||  ||  |||||||||||||| ||| | ||||||| |||||||||||||||    
T  19649103 cagagagcatgcaagatttcgtagttttgacttttgagttgaaccttagatgtttttgagtgcctgaa 19649170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 35 - 97
Target Start/End: Complemental strand, 2760604 - 2760542
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 97  Q
    |||||||||||||| ||| | |||||||||||||||||||| || |||| |||||| ||||||    
T  2760604 ttttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttaataaagattag 2760542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 35 - 97
Target Start/End: Complemental strand, 3272264 - 3272202
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 97  Q
    |||||||||||||| ||| | |||||||||||||||||||| || |||| |||||| ||||||    
T  3272264 ttttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttaataaagattag 3272202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 11880753 - 11880668
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 96  Q
    ||||||||||| |  |||||||  |||||||||||||| ||| | ||||||| |||||||||||| || |||| || |||||||||    
T  11880753 cagagagcatgtagaattctgtacttttgacttttgagttgaaccttagatgtttttgagtgcctaaagatgtttattaatgatta 11880668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 122
Target Start/End: Original strand, 9177250 - 9177318
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaac 122  Q
    ||||||||| ||||||||||||||| |||| ||| |||||||||| ||| ||  ||| |||||||||||    
T  9177250 ctttagatgtttttgagtgcctgaacatgtataagaatgattaggtaagtttttagattgagattgaac 9177318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 9703767 - 9703703
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcct 75  Q
    ||||||||||| |  ||||||| ||||||||||||||| ||| | ||||||| ||||||||||||    
T  9703767 cagagagcatgtagaattctgtatttttgacttttgagttgaaccttagatgtttttgagtgcct 9703703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 122
Target Start/End: Complemental strand, 16092253 - 16092185
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaac 122  Q
    ||||||||| |||||||||||||||||||| ||| |||||||||| | | ||  ||| |||||||||||    
T  16092253 ctttagatgattttgagtgcctgaatatgtataagaatgattaggtaggtttttagattgagattgaac 16092185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 126
Target Start/End: Complemental strand, 12901852 - 12901793
Alignment:
Q  67 tgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctgg 126  Q
    |||||||||||| |||| |||||||||||||| ||| ||  ||| |||||||||||||||    
T  12901852 tgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgg 12901793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 96
Target Start/End: Complemental strand, 12187499 - 12187429
Alignment:
Q  26 attctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 96  Q
    |||||||  |||||||||||||| ||| | |||||||||||||||||||| || |||| || ||| |||||    
T  12187499 attctgtagttttgacttttgagttgaaccttagatgcttttgagtgcctaaagatgtttattaaagatta 12187429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 91
Target Start/End: Original strand, 9032929 - 9032966
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataat 91  Q
    ||||||||| |||||||||||||||||||| |||||||    
T  9032929 ctttagatgattttgagtgcctgaatatgtataataat 9032966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 12318588 - 12318543
Alignment:
Q  26 attctgtgtttttgacttttgagatgacctttagatgcttttgagt 71  Q
    |||||| |||||||||||||||| ||| | ||||||||||||||||    
T  12318588 attctgagtttttgacttttgagttgaacattagatgcttttgagt 12318543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 15581153 - 15581108
Alignment:
Q  26 attctgtgtttttgacttttgagatgacctttagatgcttttgagt 71  Q
    |||||| |||||||||||||||| ||| | ||||||||||||||||    
T  15581153 attctgagtttttgacttttgagttgaaccttagatgcttttgagt 15581108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 15754702 - 15754743
Alignment:
Q  208 ttacagaataccttgtttatgttaaatgcgatctttgtcgca 249  Q
    ||||| ||| ||||||||| ||||||||||||||||||||||    
T  15754702 ttacataatgccttgtttaggttaaatgcgatctttgtcgca 15754743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 200
Target Start/End: Complemental strand, 34201135 - 34201098
Alignment:
Q  163 aactcgccatggcgagtagaggctcctgcctcgcgagc 200  Q
    |||||||||||||||| |||||||| ||||||||||||    
T  34201135 aactcgccatggcgagcagaggctcttgcctcgcgagc 34201098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 123960 - 124000
Alignment:
Q  162 taactcgccatggcgagtagaggctcctgcctcgcgagcta 202  Q
    ||||||||| ||||||||||||||||  |||||||||||||    
T  123960 taactcgccgtggcgagtagaggctctcgcctcgcgagcta 124000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 202
Target Start/End: Complemental strand, 4993838 - 4993798
Alignment:
Q  162 taactcgccatggcgagtagaggctcctgcctcgcgagcta 202  Q
    ||||||||| ||||||||||||||||  |||||||||||||    
T  4993838 taactcgccgtggcgagtagaggctctcgcctcgcgagcta 4993798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 13395232 - 13395272
Alignment:
Q  162 taactcgccatggcgagtagaggctcctgcctcgcgagcta 202  Q
    ||||||||| ||||||||||||||||  |||||||||||||    
T  13395232 taactcgccgtggcgagtagaggctctcgcctcgcgagcta 13395272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 13462221 - 13462177
Alignment:
Q  27 ttctgtgtttttgacttttgagatgacctttagatgcttttgagt 71  Q
    ||||| |||||||||||||||| ||| | ||||||||||||||||    
T  13462221 ttctgagtttttgacttttgagttgaaccttagatgcttttgagt 13462177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 126
Target Start/End: Original strand, 15008105 - 15008177
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctgg 126  Q
    ||||||||| || |||||||||||| |||| |||||||||||||  ||  ||  ||| |||||||||||||||    
T  15008105 ctttagatgattctgagtgcctgaacatgtataataatgattagacaattttttagattgagattgaacctgg 15008177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 17701275 - 17701335
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagt 71  Q
    |||||||||||  | |||||| |||||||||||||||| ||| | |||||||| |||||||    
T  17701275 cagagagcatgtcaaattctgagtttttgacttttgagttgaaccttagatgcctttgagt 17701335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 202
Target Start/End: Complemental strand, 48785665 - 48785625
Alignment:
Q  162 taactcgccatggcgagtagaggctcctgcctcgcgagcta 202  Q
    ||||||||| ||||||||||||||||  |||||||||||||    
T  48785665 taactcgccgtggcgagtagaggctctcgcctcgcgagcta 48785625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 140; Significance: 2e-73; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 35 - 246
Target Start/End: Complemental strand, 33681488 - 33681277
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    |||||||||||||| ||| | ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33681488 ttttgacttttgagttgatccttagatgtttttgagttcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 33681389  T
Q  135 tagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaat 234  Q
    |||||| |||||| ||||||||||||| |||||||||||||||| ||||||||  |||||||||  || | ||||||||| | ||||| |||||||||||    
T  33681388 tagaatgaatttttgtgagttgcacctgaactcgccatggcgagcagaggctctcgcctcgcgaattacccagttacagagtgccttgcttatgttaaat 33681289  T
Q  235 gcgatctttgtc 246  Q
    ||||||||||||    
T  33681288 gcgatctttgtc 33681277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 35 - 249
Target Start/End: Complemental strand, 20248756 - 20248542
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    |||||||||||||| ||| |  |||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||    
T  20248756 ttttgacttttgagttgatccatagatgtttttgagtgcctgaacatgtctaataatgattaggaaagatcggagaatgagattgaacctggagagactt 20248657  T
Q  135 tagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaat 234  Q
    |||||| |||||| ||||  || |||| ||||||||||||||||||||||||   ||||||||||||||||||||||||||| |||| |||| |||||||    
T  20248656 tagaatgaatttttgtgaactgaacctgaactcgccatggcgagtagaggctatcgcctcgcgagctaactagttacagaatgccttatttaggttaaat 20248557  T
Q  235 gcgatctttgtcgca 249  Q
    |||||  ||||||||    
T  20248556 gcgattcttgtcgca 20248542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 35 - 249
Target Start/End: Complemental strand, 22238108 - 22237895
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    |||||||||||||| ||| | ||||||  ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  22238108 ttttgacttttgagttgatccttagatatttttgagtgcctgaacatgtctaataatggttaggaaagattggagaatgagattaaacctggaaagattt 22238009  T
Q  135 tagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaat 234  Q
    | |||| |||||| ||||||||||| | ||||||||||||||||||||||| |  |||||||||  | |||||||||||||| ||||||||| |||||||    
T  22238008 tggaatgaatttt-gtgagttgcacttgaactcgccatggcgagtagaggccctcgcctcgcgaattgactagttacagaatgccttgtttaggttaaat 22237910  T
Q  235 gcgatctttgtcgca 249  Q
    ||||||||| |||||    
T  22237909 gcgatctttttcgca 22237895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 35 - 249
Target Start/End: Original strand, 52927623 - 52927836
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    |||||||||||||| ||||| ||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  52927623 ttttgacttttgagttgacccttagatgtttttgagtgcctgaacatgtctaataatgattatgaaagattggagaatgagattgaacctggaaagattt 52927722  T
Q  135 tagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaat 234  Q
    | |||| ||||||    ||||  |||| ||||||||||||||||||||||| |  |||||||||  | || ||||||||||| ||||| ||| |||||||    
T  52927723 tggaatgaattttttaaagttagacctgaactcgccatggcgagtagaggccctcgcctcgcgaattgaccagttacagaatgccttg-ttaggttaaat 52927821  T
Q  235 gcgatctttgtcgca 249  Q
    |||||||||||||||    
T  52927822 gcgatctttgtcgca 52927836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 35 - 249
Target Start/End: Original strand, 22921509 - 22921723
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    ||||||| |||||| ||| | ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||   |||    
T  22921509 ttttgacctttgagttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattgagattgaaccaggaatagttt 22921608  T
Q  135 tagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaat 234  Q
     ||||  |||||| | |||||  || | |||||||||||||||||||||||||  ||||||||| ||  ||||||||||||| ||||||||  |||||||    
T  22921609 aagaacgaatttttgagagttagacttgaactcgccatggcgagtagaggctctcgcctcgcgaactgcctagttacagaatgccttgtttgggttaaat 22921708  T
Q  235 gcgatctttgtcgca 249  Q
    |||||||||||||||    
T  22921709 gcgatctttgtcgca 22921723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 59 - 249
Target Start/End: Original strand, 35981352 - 35981542
Alignment:
Q  59 gatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaattaattttcgtgagttgca 158  Q
    |||| |||||||||||||||  ||| | || ||||||||||||||||| ||| ||||||||||||||| |   ||| ||||  |||||  ||||||||||    
T  35981352 gatgtttttgagtgcctgaacttgtatgatgatgattaggaaagattgtagattgagattgaacctgggatagtttaagaacgaatttatgtgagttgca 35981451  T
Q  159 ccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaatgcgatctttgtcgca 249  Q
    ||| |||||||||||| ||||||||||||  ||||||||||||||||||||||||||| ||||||||| |||||| |||||||||||||||    
T  35981452 cctgaactcgccatggtgagtagaggctctcgcctcgcgagctaactagttacagaatgccttgtttaggttaaaagcgatctttgtcgca 35981542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 34 - 199
Target Start/End: Complemental strand, 21754515 - 21754351
Alignment:
Q  34 tttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagatt 133  Q
    ||||||||||||||| ||| | ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||| |    
T  21754515 tttttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaaagagattgaacctgggaagact 21754416  T
Q  134 ttagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgag 199  Q
    ||||||| |||||| ||||  || |||| |||||||||||||||| ||||||||  ||||||||||    
T  21754415 ttagaatgaatttt-gtgaactgaacctgaactcgccatggcgagcagaggctctcgcctcgcgag 21754351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 12 - 199
Target Start/End: Complemental strand, 433509 - 433322
Alignment:
Q  12 agagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaa 111  Q
    ||||||| |||||||||| ||| |||||||||||||| ||| | ||||||||||||||||| ||||| ||||||| |||||||||||||||| || ||||    
T  433509 agagagcttgcaagattccgtgattttgacttttgagttgatccttagatgcttttgagtgtctgaacatgtctattaatgattaggaaagaatgtagaa 433410  T
Q  112 tgagattgaacctggaaagattttagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgag 199  Q
    ||||||||||||||||||||||||||||| ||  || | || |   |||| |||||||||||||||| ||||||||  ||||||||||    
T  433409 tgagattgaacctggaaagattttagaatgaaactttgggaatctgacctgaactcgccatggcgagcagaggctctcgcctcgcgag 433322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 64 - 249
Target Start/End: Complemental strand, 20637300 - 20637115
Alignment:
Q  64 ttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaattaattttcgtgagttgcacctta 163  Q
    ||||||||||||  |  ||| |||| ||||||||||||||||||||| | |||||||||||||||   ||| ||||  |||||| ||||||||||||| |    
T  20637300 ttttgagtgcctagacttgtataatgatgattaggaaagattggagattaagattgaacctggaatagtttaagaacgaatttttgtgagttgcacctga 20637201  T
Q  164 actcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaatgcgatctttgtcgca 249  Q
    ||||||||||||||||||||||||  ||||||||||||||  |||||||||||  |||||||| |||||| |||||||||||||||    
T  20637200 actcgccatggcgagtagaggctctcgcctcgcgagctaatcagttacagaatgtcttgtttaggttaaaagcgatctttgtcgca 20637115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 11 - 125
Target Start/End: Complemental strand, 21162231 - 21162117
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||| |||| ||||||| || |||    
T  21162231 cagagagcatgcaagattctgtgtttttgacttttgagatgacccttaaatgcttttgagtgcctgaataagtctaataacgattgggaaagaatgtaga 21162132  T
Q  111 atgagattgaacctg 125  Q
    |||||||||||||||    
T  21162131 atgagattgaacctg 21162117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 11 - 134
Target Start/End: Original strand, 50209832 - 50209954
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||||||||||||||||| |||| |||||||||||||| ||| ||| | |||| |||||||||||||| |||||||||||||||||||||||| || |||    
T  50209832 cagagagcatgcaagattttgtgattttgacttttgagttgatctt-atatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 50209930  T
Q  111 atgagattgaacctggaaagattt 134  Q
    ||||||||||||||||||||||||    
T  50209931 atgagattgaacctggaaagattt 50209954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 59 - 249
Target Start/End: Original strand, 28194114 - 28194304
Alignment:
Q  59 gatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaattaattttcgtgagttgca 158  Q
    |||| |||||||||||||||  ||| | || ||||||||||||||||| ||| |||||||||||||| ||   ||| ||||| ||| || ||||||||||    
T  28194114 gatgtttttgagtgcctgaacttgtatgatgatgattaggaaagattgtagattgagattgaacctgaaatagtttaagaatgaatctttgtgagttgca 28194213  T
Q  159 ccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaatgcgatctttgtcgca 249  Q
    ||| ||||||||||||| |||||||||||  ||||||||||||| | | ||||| |||  |||||||| |||| |||||||||||||||||    
T  28194214 cctgaactcgccatggcaagtagaggctctcgcctcgcgagctacccatttacaaaatgtcttgtttaggttacatgcgatctttgtcgca 28194304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 11 - 140
Target Start/End: Complemental strand, 22532772 - 22532643
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  ||| |||||||||||||  ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||     
T  22532772 cagagagcatgcaagatttcgtgattttgacttttgatttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 22532673  T
Q  111 atgagattgaacctggaaagattttagaat 140  Q
    |||||||||||||||||| |||| ||||||    
T  22532672 atgagattgaacctggaaggattgtagaat 22532643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 11 - 140
Target Start/End: Complemental strand, 34510283 - 34510154
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||||||| |||||||||  ||| |||||||||||||| |||   ||||||||||||||||||||||| |||||||||||||||||||||||| || ||     
T  34510283 cagagagcttgcaagatttcgtgattttgacttttgagttgattcttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 34510184  T
Q  111 atgagattgaacctggaaagattttagaat 140  Q
    ||||||||||||||||||||||| ||||||    
T  34510183 atgagattgaacctggaaagattgtagaat 34510154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 20846848 - 20846965
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||||||||||||||||| |||  ||||||| |||||| ||| | ||||||||||||||||||||||| ||||||||||||||||||| |||| || ||     
T  20846848 cagagagcatgcaagattttgtaattttgacctttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggtaagaatgtagg 20846947  T
Q  111 atgagattgaacctggaa 128  Q
    ||||||||||||||||||    
T  20846948 atgagattgaacctggaa 20846965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 11 - 247
Target Start/End: Complemental strand, 20919104 - 20918870
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||||||||||||||||| | |  ||||||| |||||| ||| | ||| ||||||||||||||||||| |||||||||||||||||||||||| || |||    
T  20919104 cagagagcatgcaagattttataattttgacctttgagttgatccttacatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 20919005  T
Q  111 atgagattgaacctggaaagattttagaa-ttaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagtt 209  Q
    ||||||||||||||| |||||  |||||| |||| ||| | || |   | || |||||||||||||||| ||||||||  ||||||||||||     |||    
T  20919004 atgagattgaacctgaaaaga-cttagaatttaaatttggagaatctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgagcttgtgtgtt 20918907  T
Q  210 acagaataccttgtttatgttaaatgcgatctttgtcg 247  Q
    | ||||| |||| |||| ||| ||||||||||||||||    
T  20918906 aaagaatgcctt-tttaggttgaatgcgatctttgtcg 20918870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 11 - 140
Target Start/End: Original strand, 22354190 - 22354319
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||||||||||||||||| |||| |||||||||||||| ||| | ||| |||||||||||||| |||| |||||| ||||||||||||||| |  | ||     
T  22354190 cagagagcatgcaagattttgtgattttgacttttgagttgaaccttatatgcttttgagtgcttgaacatgtcttataatgattaggaaataacgtagg 22354289  T
Q  111 atgagattgaacctggaaagattttagaat 140  Q
    ||||||||||||||||| ||||| ||||||    
T  22354290 atgagattgaacctggatagattgtagaat 22354319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 35 - 128
Target Start/End: Original strand, 22355827 - 22355920
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaa 128  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || || ||||||||||||||||||    
T  22355827 ttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 22355920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 35 - 128
Target Start/End: Original strand, 22357513 - 22357606
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaa 128  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || || ||||||||||||||||||    
T  22357513 ttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 22357606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 27250358 - 27250475
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  ||  | |||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||     
T  27250358 cagagagcatgcaagatttcgtaatattgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 27250457  T
Q  111 atgagattgaacctggaa 128  Q
    ||| ||||||||||||||    
T  27250458 atgggattgaacctggaa 27250475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 38801020 - 38801137
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||   | ||||||||||||||| ||| |||||||||  |||||||||||||| |||||||||||||||||||||||| || ||     
T  38801020 cagagagcatgcaagatttcatatttttgacttttgagttgaactttagatgtctttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 38801119  T
Q  111 atgagattgaacctggaa 128  Q
    ||| ||||||||||||||    
T  38801120 atgtgattgaacctggaa 38801137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 20135690 - 20135570
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||||||||||||| ||| |||  |||||||||||||| | | | |||||||||||||||||| |||| |||||||||||||||||||||||| || ||     
T  20135690 cagagagcatgcaatattttgtaattttgacttttgagtttatccttagatgcttttgagtgcttgaacatgtctaataatgattaggaaagaatgtagg 20135591  T
Q  111 atgagattgaacctggaaaga 131  Q
    ||||||||| |||||||||||    
T  20135590 atgagattggacctggaaaga 20135570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 11 - 128
Target Start/End: Complemental strand, 21027172 - 21027055
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||||||||||||||| | |||  ||||||| |||||| ||| | |||||||||||||||||| |||| ||||||||||||||||||| |||| || ||     
T  21027172 cagagagcatgcaagaatttgtaattttgacctttgagttgatccttagatgcttttgagtgcttgaacatgtctaataatgattaggtaagaatgtagg 21027073  T
Q  111 atgagattgaacctggaa 128  Q
    ||||||||||||||||||    
T  21027072 atgagattgaacctggaa 21027055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 12 - 100
Target Start/End: Original strand, 21301157 - 21301245
Alignment:
Q  12 agagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaa 100  Q
    |||||||||||||||||  ||| |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||    
T  21301157 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaa 21301245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 165 - 249
Target Start/End: Complemental strand, 49261690 - 49261606
Alignment:
Q  165 ctcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaatgcgatctttgtcgca 249  Q
    ||||||||||||| |||||||||  ||||||||||||||| ||||||||||| ||||||||| |||||| |||||||||||||||    
T  49261690 ctcgccatggcgaatagaggctctcgcctcgcgagctaaccagttacagaatgccttgtttaggttaaaagcgatctttgtcgca 49261606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 54 - 129
Target Start/End: Original strand, 16367871 - 16367946
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaa 129  Q
    ||||||||| |||||||||||||||||||| |||||||||||||| ||| ||  ||| ||||| ||||||||||||    
T  16367871 ctttagatgattttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagaatgaacctggaaa 16367946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 35 - 161
Target Start/End: Complemental strand, 43697839 - 43697713
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    ||||||||||| || ||| | ||||||| ||||||||||||||| ||||||| | |||||||| |||||||  ||| ||||||| |||||||||   |||    
T  43697839 ttttgacttttaagttgaaccttagatgtttttgagtgcctgaacatgtctatttatgattagaaaagattctagattgagatttaacctggaatagttt 43697740  T
Q  135 tagaattaattttcgtgagttgcacct 161  Q
     |||||  ||||||| ||||| |||||    
T  43697739 aagaatggattttcgggagttacacct 43697713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 99
Target Start/End: Original strand, 20091092 - 20091180
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattagga 99  Q
    ||||||||||||||||||   | ||||||||||||||| | | | |||||||| ||||| |||||||| |||||||||| |||||||||    
T  20091092 cagagagcatgcaagatttcttatttttgacttttgagttaaaccttagatgcctttgattgcctgaacatgtctaatattgattagga 20091180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 16093478 - 16093552
Alignment:
Q  55 tttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaa 129  Q
    |||||||| ||||||||||||| |||||| ||||||||||| || ||| ||  ||| ||||||||||||||||||    
T  16093478 tttagatggttttgagtgcctggatatgtataataatgatttggcaagtttttagattgagattgaacctggaaa 16093552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 56 - 136
Target Start/End: Complemental strand, 21342606 - 21342526
Alignment:
Q  56 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagatttta 136  Q
    ||||||| ||||||||| |||||||||| |||||||||||||| ||| ||  ||| ||||| ||||||||| || ||||||    
T  21342606 ttagatgattttgagtgtctgaatatgtataataatgattaggcaagtttttagattgagaatgaacctgggaaaatttta 21342526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 56 - 136
Target Start/End: Complemental strand, 21347471 - 21347391
Alignment:
Q  56 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagatttta 136  Q
    ||||||| ||||||||| |||||||||| |||||||||||||| ||| ||  ||| ||||| ||||||||| || ||||||    
T  21347471 ttagatgattttgagtgtctgaatatgtataataatgattaggcaagtttttagattgagaatgaacctgggaaaatttta 21347391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 126
Target Start/End: Original strand, 21895893 - 21895965
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctgg 126  Q
    ||||||||| || |||||||||||| | || |||||||||||||||||| ||  ||| |||||||||||||||    
T  21895893 ctttagatgattatgagtgcctgaacaagtataataatgattaggaaagtttttagattgagattgaacctgg 21895965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 22468312 - 22468400
Alignment:
Q  8 gaacagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 96  Q
    |||||||||||||| ||||||  ||  |||||||||||||| ||| | ||||||| ||||||||||||||| ||| ||| ||| |||||    
T  22468312 gaacagagagcatgtaagatttcgtagttttgacttttgagttgaaccttagatgtttttgagtgcctgaagatgcctattaaagatta 22468400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 122
Target Start/End: Original strand, 27652806 - 27652874
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaac 122  Q
    ||||||||| |||||||||||||||||||  |||||||||||||| ||| ||  ||| |||||||||||    
T  27652806 ctttagatgtttttgagtgcctgaatatgcataataatgattaggcaagtttttagattgagattgaac 27652874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 97
Target Start/End: Original strand, 18181763 - 18181826
Alignment:
Q  34 tttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 97  Q
    ||||||||||||||| ||| | |||||||||||||||||||| || |||| || ||||||||||    
T  18181763 tttttgacttttgagttgaaccttagatgcttttgagtgcctaaagatgtttattaatgattag 18181826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 226
Target Start/End: Complemental strand, 26065291 - 26065228
Alignment:
Q  163 aactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgttta 226  Q
    |||||||||| ||||||||||||||  |||||||||| |  | |||||||||||||||||||||    
T  26065291 aactcgccatagcgagtagaggctctcgcctcgcgagttgcccagttacagaataccttgttta 26065228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 125
Target Start/End: Original strand, 35260716 - 35260787
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctg 125  Q
    ||||||||| || |||||||||||| |||| |||||||||||||| ||| ||  ||| ||||||||||||||    
T  35260716 ctttagatgattctgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctg 35260787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 122
Target Start/End: Complemental strand, 48521103 - 48521036
Alignment:
Q  55 tttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaac 122  Q
    |||||||| |||||||| ||||||||||| |||||||||||||| ||| ||  ||| |||||||||||    
T  48521103 tttagatgtttttgagtacctgaatatgtataataatgattaggcaagtttttagattgagattgaac 48521036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 50687127 - 50687056
Alignment:
Q  55 tttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctgg 126  Q
    ||||| || ||||||||||||| |||||| |||||||||||||| ||| ||  ||| |||||||||||||||    
T  50687127 tttagctgattttgagtgcctgtatatgtataataatgattaggcaagtttttagattgagattgaacctgg 50687056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 126
Target Start/End: Original strand, 21533479 - 21533552
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaa-tgagattgaacctgg 126  Q
    ||||||||| |||||||||||||||||||| ||| |||||||||| ||| ||  |||| ||| |||||||||||    
T  21533479 ctttagatgattttgagtgcctgaatatgtataagaatgattaggcaagtttttagaattgaaattgaacctgg 21533552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 42864830 - 42864915
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 96  Q
    ||||||||||| |  ||||||| ||||||||||||||| ||| | ||||||| |||||||||||| ||  ||| || |||||||||    
T  42864830 cagagagcatgtagaattctgtatttttgacttttgagttgaaccttagatgtttttgagtgcctaaagttgtttattaatgatta 42864915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 126
Target Start/End: Original strand, 21861155 - 21861227
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctgg 126  Q
    ||||||||| || |||||||||||| | || |||||||||||||| ||| ||  ||| |||||||||||||||    
T  21861155 ctttagatgattctgagtgcctgaacaagtataataatgattaggcaagtttttagattgagattgaacctgg 21861227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 126
Target Start/End: Complemental strand, 26065454 - 26065382
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctgg 126  Q
    ||||||||| |  |||||||||||| |||| |||||||||||||| ||| ||  ||| |||||||||||||||    
T  26065454 ctttagatgatcctgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgg 26065382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 122
Target Start/End: Complemental strand, 16381699 - 16381632
Alignment:
Q  55 tttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaac 122  Q
    |||||||| ||||||||||||| | |||| ||| |||||||||||||| ||  ||||||| |||||||    
T  16381699 tttagatggttttgagtgcctggacatgtataagaatgattaggaaagtttttagaatgaaattgaac 16381632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 97
Target Start/End: Original strand, 22831012 - 22831083
Alignment:
Q  26 attctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 97  Q
    ||||||| ||||||||||||||| ||| | ||||||| |||||||||||| || |||| || ||| ||||||    
T  22831012 attctgtatttttgacttttgagttgaaccttagatgtttttgagtgcctaaagatgtttattaaagattag 22831083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 122
Target Start/End: Original strand, 50613706 - 50613769
Alignment:
Q  59 gatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaac 122  Q
    |||| |||||||||| ||||||||| |||||||||||||| ||| ||  ||| |||||||||||    
T  50613706 gatgattttgagtgcatgaatatgtataataatgattaggcaagtttttagattgagattgaac 50613769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 122
Target Start/End: Original strand, 50621534 - 50621597
Alignment:
Q  59 gatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaac 122  Q
    |||| |||||||||| ||||||||| |||||||||||||| ||| ||  ||| |||||||||||    
T  50621534 gatgattttgagtgcatgaatatgtataataatgattaggcaagtttttagattgagattgaac 50621597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 96
Target Start/End: Original strand, 21787676 - 21787746
Alignment:
Q  26 attctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 96  Q
    ||||||| |||||||||| |||| ||| | ||||||| |||||||||||| || |||| |||||| |||||    
T  21787676 attctgtatttttgacttgtgagttgaaccttagatgtttttgagtgcctaaagatgtttaataaagatta 21787746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 97
Target Start/End: Original strand, 22432426 - 22432488
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 97  Q
    |||||||||||||| ||| | |||||||||||||||||||| || |||| || ||| ||||||    
T  22432426 ttttgacttttgagttgaaccttagatgcttttgagtgcctaaagatgtttattaaagattag 22432488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 41049631 - 41049701
Alignment:
Q  56 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctgg 126  Q
    ||||||| || |||||||||||| |||| |||||||| ||||| ||| ||  ||| |||||||||||||||    
T  41049631 ttagatgtttctgagtgcctgaacatgtataataatggttaggcaagtttttagattgagattgaacctgg 41049701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 125
Target Start/End: Complemental strand, 16759184 - 16759115
Alignment:
Q  56 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctg 125  Q
    ||||||| |||||||||||| || | || |||||||||||||| ||| ||  ||| ||||||||||||||    
T  16759184 ttagatgtttttgagtgcctaaacacgtataataatgattaggcaagtttttagattgagattgaacctg 16759115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 20228454 - 20228499
Alignment:
Q  26 attctgtgtttttgacttttgagatgacctttagatgcttttgagt 71  Q
    |||||| |||||||||||||||||||| | |||||||| |||||||    
T  20228454 attctgagtttttgacttttgagatgaaccttagatgcctttgagt 20228499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 14432122 - 14432162
Alignment:
Q  162 taactcgccatggcgagtagaggctcctgcctcgcgagcta 202  Q
    ||||||||| ||||||||||||||||  |||||||||||||    
T  14432122 taactcgccgtggcgagtagaggctctcgcctcgcgagcta 14432162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 202
Target Start/End: Complemental strand, 20631668 - 20631628
Alignment:
Q  162 taactcgccatggcgagtagaggctcctgcctcgcgagcta 202  Q
    ||||||||| ||||||||||||||||  |||||||||||||    
T  20631668 taactcgccgtggcgagtagaggctctcgcctcgcgagcta 20631628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 21683534 - 21683490
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattagg 98  Q
    ||||||||| |||||||||||||||||||| ||| ||||| ||||    
T  21683534 ctttagatgattttgagtgcctgaatatgtataagaatgactagg 21683490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 22900021 - 22900061
Alignment:
Q  162 taactcgccatggcgagtagaggctcctgcctcgcgagcta 202  Q
    ||||||||| ||||||||||||||||  |||||||||||||    
T  22900021 taactcgccgtggcgagtagaggctctcgcctcgcgagcta 22900061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 202
Target Start/End: Complemental strand, 24087767 - 24087727
Alignment:
Q  162 taactcgccatggcgagtagaggctcctgcctcgcgagcta 202  Q
    ||||||||| ||||||||||||||||  |||||||||||||    
T  24087767 taactcgccgtggcgagtagaggctctcgcctcgcgagcta 24087727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 202
Target Start/End: Complemental strand, 36181927 - 36181887
Alignment:
Q  162 taactcgccatggcgagtagaggctcctgcctcgcgagcta 202  Q
    ||||||||| ||||||||||||||||  |||||||||||||    
T  36181927 taactcgccgtggcgagtagaggctctcgcctcgcgagcta 36181887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 202
Target Start/End: Complemental strand, 37358820 - 37358780
Alignment:
Q  162 taactcgccatggcgagtagaggctcctgcctcgcgagcta 202  Q
    ||||||||| ||||||||||||||||  |||||||||||||    
T  37358820 taactcgccgtggcgagtagaggctctcgcctcgcgagcta 37358780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 202
Target Start/End: Complemental strand, 45307642 - 45307602
Alignment:
Q  162 taactcgccatggcgagtagaggctcctgcctcgcgagcta 202  Q
    ||||||||| ||||||||||||||||  |||||||||||||    
T  45307642 taactcgccgtggcgagtagaggctctcgcctcgcgagcta 45307602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 98
Target Start/End: Original strand, 52940462 - 52940506
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattagg 98  Q
    ||||||||| ||||||||||||||| |||| ||||||| ||||||    
T  52940462 ctttagatgattttgagtgcctgaacatgtataataataattagg 52940506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 139; Significance: 8e-73; HSPs: 62)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 35 - 249
Target Start/End: Complemental strand, 19652674 - 19652460
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    |||||||||||||| ||| | ||| ||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||    
T  19652674 ttttgacttttgagttgatccttaaatgtttttgagtgcctgaacatgtctaataatgattaggaaagattgaagaatgagattgaacctggaaagactt 19652575  T
Q  135 tagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaat 234  Q
    |||||| |||||| |||| ||| |||| |||||||||||||||||||||||||  |||||||| |||||||||||||| ||||||||||||| | |||||    
T  19652574 tagaatgaatttttgtgaattgtacctgaactcgccatggcgagtagaggctctcgcctcgcgggctaactagttacaaaataccttgtttaggataaat 19652475  T
Q  235 gcgatctttgtcgca 249  Q
    |||||||||||||||    
T  19652474 gcgatctttgtcgca 19652460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 11 - 249
Target Start/End: Original strand, 4667831 - 4668068
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||| |||||||||||| || |||    
T  4667831 cagagagcatgcaagattctgtgtttttgacttttgagatgacccttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtaga 4667930  T
Q  111 atgagattgaacctggaaagattttagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagtta 210  Q
     |||||||| ||||||||||| |||||||| |||||| ||||  || |||| |||||||||||||||||||||||||  ||||||||||||| | | |||    
T  4667931 gtgagattggacctggaaagagtttagaatgaatttttgtgaactgaacctgaactcgccatggcgagtagaggctctcgcctcgcgagctacccattta 4668030  T
Q  211 cagaataccttgtttatgttaaatgcgatctttgtcgca 249  Q
    |||||| |||||  || ||||||||||||| ||||||||    
T  4668031 cagaatgccttg-ctaggttaaatgcgatccttgtcgca 4668068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 11 - 249
Target Start/End: Original strand, 4674678 - 4674915
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||| |||||||||||| || |||    
T  4674678 cagagagcatgcaagattctgtgtttttgacttttgagatgacccttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtaga 4674777  T
Q  111 atgagattgaacctggaaagattttagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagtta 210  Q
     |||||||| ||||||||||| |||||||| |||||| ||||  || ||||||||||| ||||||||||||||||||  ||||||||||||| | | |||    
T  4674778 gtgagattggacctggaaagagtttagaatgaatttttgtgaactgaaccttaactcgtcatggcgagtagaggctctcgcctcgcgagctacccattta 4674877  T
Q  211 cagaataccttgtttatgttaaatgcgatctttgtcgca 249  Q
    |||||| |||||  || ||||||||||||| ||||||||    
T  4674878 cagaatgccttg-ctaggttaaatgcgatccttgtcgca 4674915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 11 - 249
Target Start/End: Complemental strand, 4189459 - 4189222
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| | ||||||||| |||||||||||| || |||    
T  4189459 cagagagcatgcaagattctgtgttttttacttttgagatgacccttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtaga 4189360  T
Q  111 atgagattgaacctggaaagattttagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagtta 210  Q
     |||||||| ||||||||||| |||||||| |||||| ||||  || |||| |||||| ||||||||||||||||||  ||||||||||||| | | |||    
T  4189359 gtgagattggacctggaaagagtttagaatgaatttttgtgaactgaacctaaactcgtcatggcgagtagaggctctcgcctcgcgagctacccattta 4189260  T
Q  211 cagaataccttgtttatgttaaatgcgatctttgtcgca 249  Q
    |||||| |||||  || ||||||||||||| ||||||||    
T  4189259 cagaatgccttg-ctaggttaaatgcgatcgttgtcgca 4189222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 11 - 249
Target Start/End: Original strand, 4185441 - 4185678
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| | ||||||||| ||||| |||||| || |||    
T  4185441 cagagagcatgcaagattctgtgtttttgacttttgagatgacccttagatgcttttgagtgcatgaacaagtctaataacgattatgaaagaatgtaga 4185540  T
Q  111 atgagattgaacctggaaagattttagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagtta 210  Q
     |||||||||||||||||||| |||||||| |||||| ||||  || |||| |||||||||||||||||||||||||  ||||||||||||| | | |||    
T  4185541 gtgagattgaacctggaaagagtttagaatgaatttttgtgaactgaacctgaactcgccatggcgagtagaggctctcgcctcgcgagctacccattta 4185640  T
Q  211 cagaataccttgtttatgttaaatgcgatctttgtcgca 249  Q
     ||||| |||||  || ||||||||||||| ||| ||||    
T  4185641 tagaatgccttg-ctaggttaaatgcgatccttgccgca 4185678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 35 - 249
Target Start/End: Original strand, 27332926 - 27333139
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    ||||||| ||| || ||| | ||||||||||||||||| ||||| |||| |||| ||||||||||||||||  |||||||| ||||||||||||||||||    
T  27332926 ttttgacctttaagttgaaccttagatgcttttgagtggctgaacatgtataatgatgattaggaaagattttagaatgaggttgaacctggaaagattt 27333025  T
Q  135 tagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaat 234  Q
    |||||| || ||| ||||||||||||| |||||||||||||||||||||||||  ||||||||| ||  | | ||||||||| | ||| ||| |||||||    
T  27333026 tagaatgaagttttgtgagttgcacctgaactcgccatggcgagtagaggctctcgcctcgcgaactgcccaattacagaatgctttg-ttaggttaaat 27333124  T
Q  235 gcgatctttgtcgca 249  Q
    | |||| ||||||||    
T  27333125 gtgatccttgtcgca 27333139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 35 - 249
Target Start/End: Original strand, 27393666 - 27393879
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    ||||||| ||| || ||| | ||||||||||||||||| ||||| |||| |||| ||||||||||||||||  |||||||| ||||||||||||||||||    
T  27393666 ttttgacctttaagttgaaccttagatgcttttgagtggctgaacatgtataatgatgattaggaaagattttagaatgaggttgaacctggaaagattt 27393765  T
Q  135 tagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaat 234  Q
    |||||| || ||| ||||||||||||| |||||||||||||||||||||||||  ||||||||| ||  | | ||||||||| | ||| ||| |||||||    
T  27393766 tagaatgaagttttgtgagttgcacctgaactcgccatggcgagtagaggctctcgcctcgcgaactgcccaattacagaatgctttg-ttaggttaaat 27393864  T
Q  235 gcgatctttgtcgca 249  Q
    | |||| ||||||||    
T  27393865 gtgatccttgtcgca 27393879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 31155016 - 31155137
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||| ||||||| || |||    
T  31155016 cagagagcatgcaagattctgtttttttgacttttgagatgacccttagatgcttttgagtgcctgaataagtctaataacgattgggaaagaatgtaga 31155115  T
Q  111 atgagattgaacctggaaagat 132  Q
    ||||||||||||||||||||||    
T  31155116 atgagattgaacctggaaagat 31155137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 11 - 249
Target Start/End: Original strand, 29808501 - 29808739
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||| ||||||  ||| |||| ||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||| ||||| || |||    
T  29808501 cagagagcatgtaagatttcgtgattttaacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtaga 29808600  T
Q  111 atgagattgaacctggaaaga-ttttagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaact-agt 208  Q
    ||||||||||||||||||||| ||||||||| ||  || | || |   |||| |||||||||||||||| ||||||||  |||||||||| ||  |  ||    
T  29808601 atgagattgaacctggaaagatttttagaatgaaactttgggaatctgacctgaactcgccatggcgagcagaggctctcgcctcgcgag-tacttgtgt 29808699  T
Q  209 tacagaataccttgtttatgttaaatgcgatctttgtcgca 249  Q
    |||||||| ||||||||| ||| ||||||||||||||||||    
T  29808700 tacagaatgccttgtttaggtt-aatgcgatctttgtcgca 29808739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 11 - 140
Target Start/End: Original strand, 22779845 - 22779974
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  ||| |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||     
T  22779845 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 22779944  T
Q  111 atgagattgaacctggaaagattttagaat 140  Q
    ||||||||||||||||||||||| ||||||    
T  22779945 atgagattgaacctggaaagattgtagaat 22779974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 11 - 140
Target Start/End: Original strand, 17287414 - 17287543
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  ||| |||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||| || ||     
T  17287414 cagagagcatgcaagatttcgtgattttgacttttgagttgacccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 17287513  T
Q  111 atgagattgaacctggaaagattttagaat 140  Q
    ||| ||||| ||||||||||||| ||||||    
T  17287514 atgtgattgtacctggaaagattgtagaat 17287543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 11 - 249
Target Start/End: Original strand, 28496091 - 28496328
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||| ||||||  ||| |||| ||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||| ||||| || |||    
T  28496091 cagagagcatgtaagatttcgtgattttaacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtaga 28496190  T
Q  111 atgagattgaacctggaaagattttagaat-taattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaact-agt 208  Q
    |||||||||||||||||||||  |||||||  || ||| | || |   |||| |||||||||||||||| ||||||||  |||||||||| ||  |  ||    
T  28496191 atgagattgaacctggaaaga-cttagaatgaaacttttgagaatctgacctgaactcgccatggcgagcagaggctctcgcctcgcgag-tacttgtgt 28496288  T
Q  209 tacagaataccttgtttatgttaaatgcgatctttgtcgca 249  Q
    |||||||| ||||||||| ||| ||||||||||||||||||    
T  28496289 tacagaatgccttgtttaggtt-aatgcgatctttgtcgca 28496328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 11 - 134
Target Start/End: Original strand, 19303159 - 19303282
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||||||| |||||||||  ||| |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || |||    
T  19303159 cagagagcttgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 19303258  T
Q  111 atgagattgaacctggaaagattt 134  Q
    ||||||||||||||| ||||||||    
T  19303259 atgagattgaacctgaaaagattt 19303282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 56 - 247
Target Start/End: Complemental strand, 23019865 - 23019675
Alignment:
Q  56 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaattaattttcgtgagtt 155  Q
    ||||||||||||||||||||||| |||| | |||||||||||||||||||  ||| |||||||||||||||||   ||| ||||| |||||| | |||||    
T  23019865 ttagatgcttttgagtgcctgaacatgtgtgataatgattaggaaagattttagattgagattgaacctggaatattttaagaatgaatttttgggagtt 23019766  T
Q  156 gcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaatgcgatctttgtcg 247  Q
     ||||| ||||||||||||||||||||||| | ||||||||||| |  | | ||||| |||  |||| ||| ||||||||||||||||||||    
T  23019765 acacctgaactcgccatggcgagtagaggcccttgcctcgcgagttgtccaattacaaaat-gcttggttaggttaaatgcgatctttgtcg 23019675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 11 - 129
Target Start/End: Complemental strand, 1561806 - 1561688
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  || ||||||||||||||| ||| | ||||||||||||||||||||||| ||||||||||||||||||||||||  | |||    
T  1561806 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaaagtaga 1561707  T
Q  111 atgagattgaacctggaaa 129  Q
    |||||||||||||||||||    
T  1561706 atgagattgaacctggaaa 1561688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 11 - 134
Target Start/End: Original strand, 18409445 - 18409568
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||| ||||  ||| ||||||| |||||| ||| | |||||||||||||||||||| || ||||||| |||||||||||||||| || |||    
T  18409445 cagagagcatgcaggatttcgtgattttgacctttgagttgatccttagatgcttttgagtgccttaacatgtctattaatgattaggaaagaatgtaga 18409544  T
Q  111 atgagattgaacctggaaagattt 134  Q
    ||||||||||||||||||||||||    
T  18409545 atgagattgaacctggaaagattt 18409568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 12 - 128
Target Start/End: Original strand, 16920263 - 16920379
Alignment:
Q  12 agagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaa 111  Q
    |||||||||||||||||  || ||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||| ||||| || || |    
T  16920263 agagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaatatgtctaataatgattagaaaagaatgtagga 16920362  T
Q  112 tgagattgaacctggaa 128  Q
    | |||||| ||||||||    
T  16920363 taagattgtacctggaa 16920379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 20637915 - 20638029
Alignment:
Q  14 agagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatg 113  Q
    ||||||| |||||||  ||  |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || || |||    
T  20637915 agagcatccaagatttcgtaattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatg 20638014  T
Q  114 agattgaacctggaa 128  Q
    |||||||||||||||    
T  20638015 agattgaacctggaa 20638029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 39 - 199
Target Start/End: Complemental strand, 29061015 - 29060855
Alignment:
Q  39 gacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttaga 138  Q
    |||||||||| ||| | ||||||||||||||||||||||| ||||| ||||||||||||||| || || || ||||||||||||||||||||||| ||||    
T  29061015 gacttttgagttgatccttagatgcttttgagtgcctgaacatgtccaataatgattaggaaggaatgtaggatgagattgaacctggaaagattgtaga 29060916  T
Q  139 attaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgag 199  Q
    || || ||| |  | |   |||| ||||||||| | |||||||||||||  ||||||||||    
T  29060915 atgaacttttggaaatctgacctgaactcgccacgacgagtagaggctctcgcctcgcgag 29060855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 249
Target Start/End: Complemental strand, 21939886 - 21939649
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  ||| |||||||||||||| ||| | ||||||||  ||||||||||||| |||| ||||| ||||||||||||| || ||     
T  21939886 cagagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgcccttgagtgcctgaacatgtgtaatattgattaggaaagaatgtagg 21939787  T
Q  111 atgagattgaacctggaaagattttagaat-taattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactag-- 207  Q
    |||||||||| ||||||||||  |||||||  || ||| | || |   | || |||||||||||||||| ||||||||  |||||||||||  |||||      
T  21939786 atgagattgagcctggaaaga-cttagaataaaactttggagaatctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgagc--actagta 21939691  T
Q  208 ttacagaataccttgtttatgttaaatgcgatctttgtcgca 249  Q
    |||||||||  |||||||| |||||||| |||| ||||||||    
T  21939690 ttacagaatgtcttgtttaggttaaatgtgatccttgtcgca 21939649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 31 - 128
Target Start/End: Original strand, 20360609 - 20360706
Alignment:
Q  31 gtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaa 128  Q
    ||||||||||||||| || ||| | ||||||| ||||||||||||||| |||||||||||||||||||||||| || || ||||||||||||||||||    
T  20360609 gtgtttttgacttttcagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 20360706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 35 - 127
Target Start/End: Complemental strand, 18457193 - 18457101
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctgga 127  Q
    |||| ||||||||| ||| | ||||||||||||||||||||||| |||| ||||||||||||||||||| || ||||||||||||||||||||    
T  18457193 ttttaacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctgga 18457101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 17 - 131
Target Start/End: Original strand, 25611347 - 25611461
Alignment:
Q  17 gcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgaga 116  Q
    ||||||||||||  ||| |||||||||||||| ||| | |||||||| |||||||||||||| ||||||||||||||||||||  || || || ||||||    
T  25611347 gcatgcaagatttcgtgattttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaataatgattaggagtgaatgcagcatgaga 25611446  T
Q  117 ttgaacctggaaaga 131  Q
    ||| |||||||||||    
T  25611447 ttggacctggaaaga 25611461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 35 - 128
Target Start/End: Original strand, 18821472 - 18821565
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaa 128  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| |||| ||||||||||||||| ||| || || ||||||||||||||||||    
T  18821472 ttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacctggaa 18821565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 140
Target Start/End: Complemental strand, 20594276 - 20594147
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||||||| |||||||||  ||| |||| ||||||||| ||| | ||||||| |||||||||||| || ||||||||  ||||||||| |||| || ||     
T  20594276 cagagagcttgcaagatttcgtgatttttacttttgagttgatccttagatgtttttgagtgcctaaacatgtctaaatatgattagggaagaatgtagg 20594177  T
Q  111 atgagattgaacctggaaagattttagaat 140  Q
    ||||||||||||||||||||||| ||||||    
T  20594176 atgagattgaacctggaaagattgtagaat 20594147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 56 - 201
Target Start/End: Original strand, 22080400 - 22080545
Alignment:
Q  56 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaattaattttcgtgagtt 155  Q
    ||||||| ||||||||| ||||| |||||||||||||||||| ||||||| |||| | |||||||||||||||   ||| ||||  || ||  | |||||    
T  22080400 ttagatgtttttgagtgactgaacatgtctaataatgattagaaaagattagagattaagattgaacctggaatagtttaagaacgaacttatgggagtt 22080499  T
Q  156 gcaccttaactcgccatggcgagtagaggctcctgcctcgcgagct 201  Q
      |||| |||||||||||||||||||||||||  ||||||||||||    
T  22080500 atacctgaactcgccatggcgagtagaggctctcgcctcgcgagct 22080545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 35 - 199
Target Start/End: Original strand, 25628997 - 25629161
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    ||||||||||| || ||| | ||||||| | || || |||| || || |||| |||||||||||||| |||| |||||||||||||||||||||| ||||    
T  25628997 ttttgactttttagttgaaccttagatgttgttaagcgcctaaacatctctattaatgattaggaaatattgtagaatgagattgaacctggaaatattt 25629096  T
Q  135 tagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgag 199  Q
    |||||| || ||| |||| |   ||||  ||||||| ||||||| ||||||||  ||||||||||    
T  25629097 tagaataaacttttgtgattatgacctgtactcgccgtggcgagcagaggctctcgcctcgcgag 25629161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 15894049 - 15894168
Alignment:
Q  12 agagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaa 111  Q
    |||||||||||||||||  ||  |||||||||||||| ||| | |||||||| |||||||||||||| |||||||||| |||||||||  || || |  |    
T  15894049 agagagcatgcaagatttcgtacttttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggagtgaatgtaaga 15894148  T
Q  112 tgagattgaacctggaaaga 131  Q
    |||||||| |||||||||||    
T  15894149 tgagattggacctggaaaga 15894168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 128
Target Start/End: Complemental strand, 22831994 - 22831877
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  || ||||||||||||||| ||| | |||||||||||||||||  |||| |||||||||| |||||||  |||| |  ||     
T  22831994 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgtttgaacatgtctaatattgattagtgaagaatatagg 22831895  T
Q  111 atgagattgaacctggaa 128  Q
    | ||||||||||||||||    
T  22831894 acgagattgaacctggaa 22831877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 129
Target Start/End: Original strand, 22334500 - 22334618
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  ||   ||||||||||||| ||| | |||||||| |||||||||||||| |||||||||| |||||||||  || || |      
T  22334500 cagagagcatgcaagatttcgtaaatttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggagtgaatgtaag 22334599  T
Q  111 atgagattgaacctggaaa 129  Q
    ||||||||| |||||||||    
T  22334600 atgagattggacctggaaa 22334618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 25603003 - 25603123
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  ||| |||| ||||||||| ||| | | | | || |||||||||||||| ||||||||||||||||||||  || || |      
T  25603003 cagagagcatgcaagatttcgtgattttaacttttgagttgaacctgaaacgcctttgagtgcctgaacatgtctaataatgattaggagtgaatgcatg 25603102  T
Q  111 atgagattgaacctggaaaga 131  Q
    ||||||||| |||||||||||    
T  25603103 atgagattggacctggaaaga 25603123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 128
Target Start/End: Complemental strand, 11185994 - 11185877
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||| ||||||  || | ||||| ||||||| ||| | |||||||| |||||||||||||| ||||| |||| |||||||  |||| || ||     
T  11185994 cagagagcatgtaagatttcgtatatttgatttttgagttgaaccttagatgcctttgagtgcctgaacatgtcgaatattgattagtgaagagtgtagg 11185895  T
Q  111 atgagattgaacctggaa 128  Q
    | ||||||||||||||||    
T  11185894 acgagattgaacctggaa 11185877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 83
Target Start/End: Complemental strand, 22439302 - 22439230
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgt 83  Q
    |||||||||||||||||| |||  |||||||||||||| ||| | ||||||| ||||||||||||||| ||||    
T  22439302 cagagagcatgcaagattttgtaattttgacttttgagttgaaccttagatgtttttgagtgcctgaagatgt 22439230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 201
Target Start/End: Original strand, 25956263 - 25956429
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    ||||||||||| || |||   ||||||  ||||||||||||||| ||||||||| | |||| | |||||||  ||| ||||||| |||||||||   |||    
T  25956263 ttttgacttttaagttgaatcttagatatttttgagtgcctgaacatgtctaattacgattggaaaagattctagattgagatttaacctggaatagttt 25956362  T
Q  135 tagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagct 201  Q
     |||||  |||||   ||||| |||||  | ||||||||||||||||||||||  ||||||| ||||    
T  25956363 aagaatggattttttggagttacacctgtattcgccatggcgagtagaggctctcgcctcgcaagct 25956429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 22432752 - 22432667
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 96  Q
    |||||||||||||||||| |||  |||||||||||||| ||| | ||||||| |||||||||| |||| |||| || ||| |||||    
T  22432752 cagagagcatgcaagattttgtagttttgacttttgagttgaaccttagatgtttttgagtgcatgaagatgtatattaaagatta 22432667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 122
Target Start/End: Complemental strand, 17106248 - 17106180
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaac 122  Q
    ||||||||| |||||||||||||||||||| ||| |||||||||| ||| ||  ||| |||||||||||    
T  17106248 ctttagatgattttgagtgcctgaatatgtataagaatgattaggcaagtttttagactgagattgaac 17106180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 35 - 199
Target Start/End: Complemental strand, 25644801 - 25644637
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    ||||||| ||| || ||| | ||||||| |||||||||||||   |||| |||   |||||||||||||||  ||| |||||||||||||| ||   |||    
T  25644801 ttttgacctttaagttgaaccttagatgtttttgagtgcctgttcatgtataacgttgattaggaaagattttagattgagattgaacctgaaatagttt 25644702  T
Q  135 tagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgag 199  Q
     |||||  ||||| | ||||| ||||  |||||||||| |||||||||||| |  ||||||||||    
T  25644701 aagaatggatttttgggagttacacccgaactcgccatagcgagtagaggccctcgcctcgcgag 25644637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 118
Target Start/End: Complemental strand, 33443581 - 33443517
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagatt 118  Q
    ||||||||| ||||||||||||||||||||  ||||||||||||| ||||||  ||| |||||||    
T  33443581 ctttagatgattttgagtgcctgaatatgtacaataatgattaggcaagattttagattgagatt 33443517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 97
Target Start/End: Original strand, 21834524 - 21834595
Alignment:
Q  26 attctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 97  Q
    ||||||| ||||||||||||||| ||| | |||||||||||||||||||| || |||| || ||| ||||||    
T  21834524 attctgtatttttgacttttgagttgaaccttagatgcttttgagtgcctaaaaatgtttattaaagattag 21834595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 55 - 125
Target Start/End: Complemental strand, 19023908 - 19023838
Alignment:
Q  55 tttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctg 125  Q
    |||||||| ||| | |||||||||||||| |||||||||||||| ||| ||  ||| ||||||||||||||    
T  19023908 tttagatgatttcgggtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacctg 19023838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 163 - 249
Target Start/End: Complemental strand, 19668724 - 19668639
Alignment:
Q  163 aactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaatgcgatctttgtcgca 249  Q
    |||||||||| ||||||||||||||  ||||||||||||  | | |||||||| |||||| ||| |||||||| || ||||||||||    
T  19668724 aactcgccatagcgagtagaggctctcgcctcgcgagctgtccaattacagaacaccttg-ttaggttaaatgtgacctttgtcgca 19668639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 124
Target Start/End: Complemental strand, 20109675 - 20109605
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacct 124  Q
    ||||||||| || |||||||||||| |||| |||||||||||||| ||| ||  ||| |||||||||||||    
T  20109675 ctttagatgattctgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacct 20109605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 19863480 - 19863395
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 96  Q
    ||||||||||| ||||||  ||  |||||||||||||| ||| | ||||||| ||||||||||||||| ||| ||| ||| |||||    
T  19863480 cagagagcatgtaagatttcgtagttttgacttttgagttgaaccttagatgtttttgagtgcctgaagatgcctattaaagatta 19863395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 25641802 - 25641887
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 96  Q
    ||||||||||| |||||| |||  ||| |||||||||| ||| | ||||||| ||||||||||||||| |||| || ||| |||||    
T  25641802 cagagagcatgtaagattttgtagtttggacttttgagttgaaccttagatgtttttgagtgcctgaagatgtatattaaagatta 25641887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 202
Target Start/End: Complemental strand, 16830152 - 16830108
Alignment:
Q  158 accttaactcgccatggcgagtagaggctcctgcctcgcgagcta 202  Q
    ||||||||||||| ||||||||||||||||  |||||||||||||    
T  16830152 accttaactcgccgtggcgagtagaggctctcgcctcgcgagcta 16830108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 122
Target Start/End: Complemental strand, 23539454 - 23539386
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaac 122  Q
    ||||||||| |||||||||||||||||||| ||| |||| ||||| ||| ||  ||| |||||||||||    
T  23539454 ctttagatggttttgagtgcctgaatatgtataagaatggttaggcaagtttttagactgagattgaac 23539386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 97
Target Start/End: Original strand, 21739656 - 21739727
Alignment:
Q  26 attctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 97  Q
    ||||||| ||||||||||||||| ||| | ||||||| |||||||||||| || |||| || ||| ||||||    
T  21739656 attctgtttttttgacttttgagttgaaccttagatgtttttgagtgcctaaagatgtttactaaagattag 21739727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 18199019 - 18199065
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaa 100  Q
    ||||||||| |||||||||||||||| ||| ||| ||||||||||||    
T  18199019 ctttagatggttttgagtgcctgaatgtgtataagaatgattaggaa 18199065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 98
Target Start/End: Complemental strand, 18697013 - 18696979
Alignment:
Q  64 ttttgagtgcctgaatatgtctaataatgattagg 98  Q
    |||||||||||||||||||| ||||||||||||||    
T  18697013 ttttgagtgcctgaatatgtataataatgattagg 18696979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 22429675 - 22429724
Alignment:
Q  26 attctgtgtttttgacttttgagatgacctttagatgcttttgagtgcct 75  Q
    |||||| |||||||||||||||| ||| | |||||||||| |||||||||    
T  22429675 attctgagtttttgacttttgagttgaaccttagatgcttctgagtgcct 22429724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 27325248 - 27325289
Alignment:
Q  208 ttacagaataccttgtttatgttaaatgcgatctttgtcgca 249  Q
    ||||||||| ||||||||||||||||| | ||||||||||||    
T  27325248 ttacagaatgccttgtttatgttaaatacaatctttgtcgca 27325289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 202
Target Start/End: Complemental strand, 12596309 - 12596269
Alignment:
Q  162 taactcgccatggcgagtagaggctcctgcctcgcgagcta 202  Q
    ||||||||| ||||||||||||||||  |||||||||||||    
T  12596309 taactcgccgtggcgagtagaggctctcgcctcgcgagcta 12596269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 202
Target Start/End: Complemental strand, 16102695 - 16102655
Alignment:
Q  162 taactcgccatggcgagtagaggctcctgcctcgcgagcta 202  Q
    ||||||||| ||||||||||||||||  |||||||||||||    
T  16102695 taactcgccgtggcgagtagaggctctcgcctcgcgagcta 16102655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 202
Target Start/End: Complemental strand, 16813128 - 16813088
Alignment:
Q  162 taactcgccatggcgagtagaggctcctgcctcgcgagcta 202  Q
    ||||||||| ||||||||||||||||  |||||||||||||    
T  16813128 taactcgccgtggcgagtagaggctctcgcctcgcgagcta 16813088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 18204616 - 18204572
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattagg 98  Q
    ||||||||| |||||||||||||||| ||| ||| ||||||||||    
T  18204616 ctttagatggttttgagtgcctgaatgtgtataagaatgattagg 18204572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 122
Target Start/End: Complemental strand, 20224480 - 20224412
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaac 122  Q
    ||||||||| ||||||||||||||| |||  ||| |||||||||| ||| ||  ||| |||||||||||    
T  20224480 ctttagatgattttgagtgcctgaacatgcataagaatgattaggcaagtttttagattgagattgaac 20224412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 122
Target Start/End: Complemental strand, 22118464 - 22118396
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaac 122  Q
    ||||||||| ||||||||||||||| |||  ||| |||||||||| ||| ||  ||| |||||||||||    
T  22118464 ctttagatgattttgagtgcctgaacatgcataagaatgattaggcaagtttttagattgagattgaac 22118396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 98
Target Start/End: Original strand, 23527711 - 23527755
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattagg 98  Q
    ||||||||| ||||||||||||| |||||| ||| ||||||||||    
T  23527711 ctttagatggttttgagtgcctggatatgtataagaatgattagg 23527755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 25766798 - 25766858
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagt 71  Q
    |||||||||||  | |||||| |||||||||||||||| ||| | |||||||| |||||||    
T  25766798 cagagagcatgtcaaattctgagtttttgacttttgagttgaaccttagatgcctttgagt 25766858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 27415572 - 27415632
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagt 71  Q
    ||||||||||||||||||  ||| |||||||||||||| ||| | |||||||  |||||||    
T  27415572 cagagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgtctttgagt 27415632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 202
Target Start/End: Complemental strand, 29493105 - 29493065
Alignment:
Q  162 taactcgccatggcgagtagaggctcctgcctcgcgagcta 202  Q
    ||||||||| ||||||||||||||||  |||||||||||||    
T  29493105 taactcgccgtggcgagtagaggctctcgcctcgcgagcta 29493065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 122
Target Start/End: Complemental strand, 35008686 - 35008618
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaac 122  Q
    ||||||||| |||| |||||||||| |||| ||| |||||||||| ||| ||  ||| |||||||||||    
T  35008686 ctttagatgtttttaagtgcctgaacatgtataagaatgattaggcaagtttttagactgagattgaac 35008618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 11 - 249
Target Start/End: Complemental strand, 9579 - 9342
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||| |||||||||||| || |||    
T  9579 cagagagcatgcaagattctgtgtttttgacttttgagatgacccttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtaga 9480  T
Q  111 atgagattgaacctggaaagattttagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagtta 210  Q
     |||||||| ||||||||||| |||||||| |||||| ||||  || |||| |||||||||||||||||||||||||  ||||||||||||| | | |||    
T  9479 gtgagattggacctggaaagagtttagaatgaatttttgtgaactgaacctgaactcgccatggcgagtagaggctctcgcctcgcgagctacccattta 9380  T
Q  211 cagaataccttgtttatgttaaatgcgatctttgtcgca 249  Q
    |||||| |||||  || ||||||||||||| ||||||||    
T  9379 cagaatgccttg-ctaggttaaatgcgatccttgtcgca 9342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 135; Significance: 2e-70; HSPs: 71)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 35 - 249
Target Start/End: Original strand, 26355340 - 26355554
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    |||||||||||||| ||| | ||| ||| ||||||||||||||| |||||||||||||||||||| |||||| ||| |||||||||||||||||||| ||    
T  26355340 ttttgacttttgagttgatccttaaatgtttttgagtgcctgaacatgtctaataatgattaggagagattgaagattgagattgaacctggaaagactt 26355439  T
Q  135 tagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaat 234  Q
    |||||| |||||| |||| ||| |||| |||| ||||||||||||||||||||  ||||| ||||||||||||||||||||| |||||||||||||||||    
T  26355440 tagaatgaatttttgtgaattgtacctgaacttgccatggcgagtagaggctctcgcctcacgagctaactagttacagaatgccttgtttatgttaaat 26355539  T
Q  235 gcgatctttgtcgca 249  Q
    |||||||||||||||    
T  26355540 gcgatctttgtcgca 26355554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 35 - 249
Target Start/End: Complemental strand, 21674184 - 21673970
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    |||||||||||||| ||| | || || | ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21674184 ttttgacttttgagttgatccttggacgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 21674085  T
Q  135 tagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaat 234  Q
    |||||| ||| || ||||||||||||| ||||||||||||||||||||||| |  |||||||||  | ||| |||||||||| ||||||||| | |||||    
T  21674084 tagaatgaatatttgtgagttgcacctgaactcgccatggcgagtagaggccctcgcctcgcgaattgacttgttacagaatgccttgtttaggataaat 21673985  T
Q  235 gcgatctttgtcgca 249  Q
    |||||||||||||||    
T  21673984 gcgatctttgtcgca 21673970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 56 - 246
Target Start/End: Complemental strand, 39834290 - 39834100
Alignment:
Q  56 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaattaattttcgtgagtt 155  Q
    ||||||| |||||||||||| ||  ||| | |||||||||||||||||||| ||| |||||||||||||||||   ||| ||||| ||| || |||||||    
T  39834290 ttagatgtttttgagtgcctaaacttgtatgataatgattaggaaagattgtagattgagattgaacctggaatagtttaagaatgaatctttgtgagtt 39834191  T
Q  156 gcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaatgcgatctttgtc 246  Q
    |||||| |||||||||||||||||||||||||  ||||||||||||| | | ||||||||||||||||||| |||||||||||||||||||    
T  39834190 gcacctgaactcgccatggcgagtagaggctctcgcctcgcgagctacccatttacagaataccttgtttaagttaaatgcgatctttgtc 39834100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 11 - 216
Target Start/End: Complemental strand, 41598687 - 41598482
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||||||| |||| ||||| ||| |||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| |||||| || |||    
T  41598687 cagagagcttgcaggattccgtgattttgacttttgagttgacccttagatgcttttgagtgcctgaacatgtctaataatgattatgaaagaatgtaga 41598588  T
Q  111 atgagattgaacctggaaagattttagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagtta 210  Q
    |||||||||||||||||||||||||||||| ||  || | || |   |||| |||||||||||||||| ||||||||  ||||||||||  | |||||||    
T  41598587 atgagattgaacctggaaagattttagaatgaaactttgggaatctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacctagtta 41598488  T
Q  211 cagaat 216  Q
    ||||||    
T  41598487 cagaat 41598482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 11 - 140
Target Start/End: Original strand, 18878855 - 18878984
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  ||| |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||     
T  18878855 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 18878954  T
Q  111 atgagattgaacctggaaagattttagaat 140  Q
    ||||||||||||||||||||||| ||||||    
T  18878955 atgagattgaacctggaaagattgtagaat 18878984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 11 - 199
Target Start/End: Complemental strand, 23406884 - 23406695
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  ||| |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||     
T  23406884 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 23406785  T
Q  111 atgagattgaacctggaaagattttagaattaattttcgtgagttgc--accttaactcgccatggcgagtagaggctcctgcctcgcgag 199  Q
    ||||||||| ||||||||||||| |||||| ||  || ||| | | |  |||| ||||||||| |||||||||||||||  ||||||||||    
T  23406784 atgagattggacctggaaagattgtagaatgaaactt-gtgggattctgacctgaactcgccacggcgagtagaggctctcgcctcgcgag 23406695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 11 - 140
Target Start/End: Complemental strand, 20536711 - 20536582
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||||||||||||||||| |||| |||||||||| ||| ||| | ||||||||||||||||||||||| |||||| ||||||||||||||||| || ||     
T  20536711 cagagagcatgcaagattttgtgattttgactttcgagttgaaccttagatgcttttgagtgcctgaacatgtctgataatgattaggaaagaatgtagg 20536612  T
Q  111 atgagattgaacctggaaagattttagaat 140  Q
    ||||||||||||||||||||||| ||||||    
T  20536611 atgagattgaacctggaaagattgtagaat 20536582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 11 - 140
Target Start/End: Complemental strand, 22627238 - 22627109
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  ||| |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||     
T  22627238 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 22627139  T
Q  111 atgagattgaacctggaaagattttagaat 140  Q
    |||||||||||||| |||||||| ||||||    
T  22627138 atgagattgaacctcgaaagattgtagaat 22627109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 5865895 - 5866015
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  || ||||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || |||    
T  5865895 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 5865994  T
Q  111 atgagattgaacctggaaaga 131  Q
    ||||||||||||||| |||||    
T  5865995 atgagattgaacctgaaaaga 5866015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 17141416 - 17141296
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||||||||||||||||| ||| ||||| ||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || |||    
T  17141416 cagagagcatgcaagattttgtattttttacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 17141317  T
Q  111 atgagattgaacctggaaaga 131  Q
    ||||||||||||||| |||||    
T  17141316 atgagattgaacctgaaaaga 17141296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 35 - 249
Target Start/End: Original strand, 38854893 - 38855106
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    ||||||| ||| || ||| | ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| | ||||| |||||||||   |||    
T  38854893 ttttgacctttaagttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattaagatttaacctggaatagttt 38854992  T
Q  135 tagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaat 234  Q
     ||||  |||||| | ||||| ||||| ||||||||||||||||||||||| |  |||||||||  |  | ||||||||||| ||||| ||| ||||||     
T  38854993 aagaacgaatttt-gagagttacacctgaactcgccatggcgagtagaggccctcgcctcgcgaattgcccagttacagaatgccttgcttaggttaaac 38855091  T
Q  235 gcgatctttgtcgca 249  Q
     ||||||||||||||    
T  38855092 acgatctttgtcgca 38855106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 12 - 140
Target Start/End: Complemental strand, 6759759 - 6759631
Alignment:
Q  12 agagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaa 111  Q
    ||||||| |||||||||  ||| |||||||||||||| ||| | |||||||||||||||||| |||| |||||||||||||||||||||||| || ||||    
T  6759759 agagagcttgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcttgaacatgtctaataatgattaggaaagaatgtagaa 6759660  T
Q  112 tgagattgaacctggaaagattttagaat 140  Q
    ||||||||||| |||||| ||||||||||    
T  6759659 tgagattgaacttggaaatattttagaat 6759631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 21491495 - 21491375
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||||||||||||||||| |||  ||||||||||| || ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || |||    
T  21491495 cagagagcatgcaagattttgtaattttgacttttaagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 21491396  T
Q  111 atgagattgaacctggaaaga 131  Q
    |||||||||||||| ||||||    
T  21491395 atgagattgaacctagaaaga 21491375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 133
Target Start/End: Original strand, 18818028 - 18818150
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||   || |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||| | || ||     
T  18818028 cagagagcatgcaagatttcatgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtagg 18818127  T
Q  111 atgagattgaacctggaaagatt 133  Q
    |||||||||||||||||||||||    
T  18818128 atgagattgaacctggaaagatt 18818150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 12 - 134
Target Start/End: Original strand, 28648663 - 28648785
Alignment:
Q  12 agagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaa 111  Q
    |||||||||||||||||  ||| |||||||||||||| ||| | ||||||||||||||||||||||| ||||||||||||||||| |||||| || || |    
T  28648663 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattatgaaagaatgtagga 28648762  T
Q  112 tgagattgaacctggaaagattt 134  Q
    ||||||||||| |||||||||||    
T  28648763 tgagattgaacatggaaagattt 28648785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 19801045 - 19801218
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  ||| |||||||||||||| ||| | |||||||| | |||||||||||| |||||||||||||||||||||||| | ||||    
T  19801045 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcatatgagtgcctgaacatgtctaataatgattaggaaagactagaga 19801144  T
Q  111 atgagattgaacctggaaagattttagaattaattttcgtgagttgcaccttaactcgccatggcgagtagagg 184  Q
    || |||||||||||||||   ||| ||||  || ||  | |||||  |||| ||||||||||||||||||||||    
T  19801145 ataagattgaacctggaatagtttaagaacgaacttgtgggagttatacctgaactcgccatggcgagtagagg 19801218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 11 - 128
Target Start/End: Complemental strand, 31971747 - 31971630
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  |||||||||||||||||| ||| | ||||||||||||| ||||||||| |||||||||||||||||||||||  || ||     
T  31971747 cagagagcatgcaagatttcgtgtttttgacttttgagttgaaccttagatgcttttgtgtgcctgaacatgtctaataatgattaggaaaggatgtagg 31971648  T
Q  111 atgagattgaacctggaa 128  Q
    ||||||||||||||||||    
T  31971647 atgagattgaacctggaa 31971630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 11 - 134
Target Start/End: Original strand, 16091959 - 16092082
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||||||| |||||||||  ||| |||||||||||||| ||| | |||||||||||||||||| |||| |||||||||||||||||||||||| || |||    
T  16091959 cagagagcttgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcatgaacatgtctaataatgattaggaaagaatgtaga 16092058  T
Q  111 atgagattgaacctggaaagattt 134  Q
    |||||||| |||||| ||||||||    
T  16092059 atgagattaaacctgaaaagattt 16092082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 35 - 140
Target Start/End: Complemental strand, 7373228 - 7373123
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || || |||| ||||||||||||||||||     
T  7373228 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgaaattgaacctggaaagattg 7373129  T
Q  135 tagaat 140  Q
    ||||||    
T  7373128 tagaat 7373123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 45130649 - 45130766
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||||| |||||||||||  || ||||||||||||||  ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||     
T  45130649 cagagaccatgcaagatttcgtatttttgacttttgaattgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 45130748  T
Q  111 atgagattgaacctggaa 128  Q
    ||||||||||||||||||    
T  45130749 atgagattgaacctggaa 45130766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 21255722 - 21255602
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  |  ||||||||||||||| ||| | |||||||||||||||||||  || |||||||||||||||||||||||| || ||     
T  21255722 cagagagcatgcaagatttcgcatttttgacttttgagttgaaccttagatgcttttgagtgcccaaacatgtctaataatgattaggaaagaatgtagg 21255623  T
Q  111 atgagattgaacctggaaaga 131  Q
    |||||||||||||||||||||    
T  21255622 atgagattgaacctggaaaga 21255602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 134
Target Start/End: Original strand, 21923546 - 21923669
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||||||||||  ||||| |||| |||||||||||||| ||| | ||||||||||||||||| ||||| |||||||||||||||||||| ||| || ||     
T  21923546 cagagagcatgtgagattttgtgattttgacttttgagttgatccttagatgcttttgagtgtctgaacatgtctaataatgattaggacagaatgtagg 21923645  T
Q  111 atgagattgaacctggaaagattt 134  Q
    ||||||||||||||| ||||||||    
T  21923646 atgagattgaacctgaaaagattt 21923669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 23649055 - 23648936
Alignment:
Q  12 agagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaa 111  Q
    |||||||||||||||||   ||||||||||||||||| ||| | ||||||||||||||||| ||||| |||||||||||||||||||||||| || || |    
T  23649055 agagagcatgcaagatttcatgtttttgacttttgagttgatccttagatgcttttgagtgactgaacatgtctaataatgattaggaaagaatgtagga 23648956  T
Q  112 tgagattgaacctggaaaga 131  Q
    |||||||| ||||| |||||    
T  23648955 tgagattggacctgaaaaga 23648936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 21249884 - 21249764
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  |  ||||||||||||||| ||| | |||||||||||||||||||  || |||||||||||||||||||||||| || ||     
T  21249884 cagagagcatgcaagatttcgcatttttgacttttgagttgaaccttagatgcttttgagtgcccaaacatgtctaataatgattaggaaagaatgtagg 21249785  T
Q  111 atgagattgaacctggaaaga 131  Q
    |||||| ||||||||||||||    
T  21249784 atgagactgaacctggaaaga 21249764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 199
Target Start/End: Complemental strand, 22875568 - 22875380
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||||||| |||||||||  ||| ||||||| |||||| | | | ||||||||||||||| | || || |||| |||||||||||||||||||||| |||    
T  22875568 cagagagcttgcaagatttcgtgattttgacctttgagttaatccttagatgcttttgagcgtctaaacatgtttaataatgattaggaaagattgtaga 22875469  T
Q  111 atgagattgaacctggaaagattttagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgag 199  Q
    | ||| |||||||||||||||||||||||| ||  || | || |   |||| ||||||||||| |||| ||||||||  ||||||||||    
T  22875468 acgaggttgaacctggaaagattttagaatgaaactttgggaatctgacctgaactcgccatgacgagcagaggctctcgcctcgcgag 22875380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 16199276 - 16199389
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  || ||||||||||||||| ||| | || ||||||||||||||||| || |||||| ||||||||||||||||| || ||     
T  16199276 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttggatgcttttgagtgccttaacatgtcttataatgattaggaaagaatgtagg 16199375  T
Q  111 atgagattgaacct 124  Q
    ||||||||||||||    
T  16199376 atgagattgaacct 16199389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 129
Target Start/End: Original strand, 21918628 - 21918746
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||| |||||||||||||  ||  |||||||||||||| ||| | ||||||||||| ||||||||||| |||||||||||||||||| ||||| || ||     
T  21918628 cagacagcatgcaagatttcgtaattttgacttttgagttgaaccttagatgctttggagtgcctgaacatgtctaataatgattagaaaagaatgtagg 21918727  T
Q  111 atgagattgaacctggaaa 129  Q
    | |||||||||||||||||    
T  21918728 aagagattgaacctggaaa 21918746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 35 - 249
Target Start/End: Original strand, 23760482 - 23760695
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    |||||||||||||| ||| |  |  ||| |||||||| |||||| |||||||||||||||||||||| |||||| | |||||||||||||||||   |||    
T  23760482 ttttgacttttgagttgatccctgaatgtttttgagttcctgaacatgtctaataatgattaggaaatattggatattgagattgaacctggaatagttt 23760581  T
Q  135 tagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaat 234  Q
     ||||  || ||  | |||||  |||| |||| |||| ||||||||||||| |  |||||||||  | |||||||||| ||| ||||| ||| | |||||    
T  23760582 aagaacgaacttgtgggagttatacctgaacttgccaaggcgagtagaggccctcgcctcgcgaattgactagttacaaaatgccttg-ttaggataaat 23760680  T
Q  235 gcgatctttgtcgca 249  Q
    |||||||||||||||    
T  23760681 gcgatctttgtcgca 23760695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 26 - 128
Target Start/End: Original strand, 25362784 - 25362886
Alignment:
Q  26 attctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctg 125  Q
    ||||||| ||||||||||||||| ||| | |||||||| |||||||| ||||| ||| |||||||||||||||||||| || || |||||||||||||||    
T  25362784 attctgtatttttgacttttgagttgaaccttagatgcctttgagtgactgaacatgactaataatgattaggaaagaatgtaggatgagattgaacctg 25362883  T
Q  126 gaa 128  Q
    |||    
T  25362884 gaa 25362886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 35 - 245
Target Start/End: Complemental strand, 6520847 - 6520638
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    ||||||| ||| || ||| | ||||||| ||||||||| ||||| |||||||||||| |||||||||||||||||| | ||| |||||||| ||   |||    
T  6520847 ttttgacctttaagttgaaccttagatgtttttgagtgtctgaacatgtctaataataattaggaaagattggagattaagactgaacctgaaatagttt 6520748  T
Q  135 tagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaat 234  Q
     |||||  ||||| | |||||  |||| || |||||||||||||||||||| |  ||||||| | ||  | | ||||||||| | ||| ||| |||||||    
T  6520747 aagaatggatttttgagagttagacctgaattcgccatggcgagtagaggccctcgcctcgcaaactgcccaattacagaatgctttg-ttaggttaaat 6520649  T
Q  235 gcgatctttgt 245  Q
    |||||||||||    
T  6520648 gcgatctttgt 6520638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 21389071 - 21389156
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 96  Q
    ||||||||||||||||||  || ||||||||||||||| ||| | ||||||||||||||||||||||| |||  |||||| |||||    
T  21389071 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaagatgcttaataaagatta 21389156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 54 - 125
Target Start/End: Complemental strand, 37116884 - 37116813
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctg 125  Q
    ||||||||| |||||||||||||||||||| |||||||||||||| ||| ||  ||| ||||||||||||||    
T  37116884 ctttagatgattttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacctg 37116813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 124
Target Start/End: Original strand, 17266577 - 17266647
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacct 124  Q
    ||||||||| |||||||||||||||||||| |||||||||||||| ||| ||  ||| |||||||||||||    
T  17266577 ctttagatgtttttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacct 17266647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 35 - 125
Target Start/End: Complemental strand, 20499139 - 20499049
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctg 125  Q
    |||||||  ||||| ||| ||||||||| ||||||||||||||| |||| |||||||||||||| ||| ||  ||| ||||||||||||||    
T  20499139 ttttgacccttgagttgaactttagatgattttgagtgcctgaacatgtataataatgattaggtaagtttttagattgagattgaacctg 20499049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 126
Target Start/End: Complemental strand, 24353560 - 24353488
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctgg 126  Q
    ||||||||  |||||||||||||||||||| |||||||||||||| ||| ||  ||| |||||||||||||||    
T  24353560 ctttagataattttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacctgg 24353488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 122
Target Start/End: Original strand, 21414890 - 21414956
Alignment:
Q  56 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaac 122  Q
    ||||||| ||||||||||||||| |||   | ||||||||||||||||||| |||||||||||||||    
T  21414890 ttagatgtttttgagtgcctgaagatgcacactaatgattaggaaagattgtagaatgagattgaac 21414956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 124
Target Start/End: Original strand, 40492436 - 40492506
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacct 124  Q
    ||||||||| |||||||||||||||||||| ||| |||||||||| ||| ||  ||| |||||||||||||    
T  40492436 ctttagatgattttgagtgcctgaatatgtataagaatgattaggcaagtttttagattgagattgaacct 40492506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 126
Target Start/End: Original strand, 2418460 - 2418532
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctgg 126  Q
    ||||||||| |||||||||||||||||||| ||| |||||||||| ||| ||  ||| ||| |||||||||||    
T  2418460 ctttagatggttttgagtgcctgaatatgtataagaatgattaggcaagtttttagattgaaattgaacctgg 2418532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 126
Target Start/End: Original strand, 17439090 - 17439162
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctgg 126  Q
    ||||||||| ||||||||||||||||||||  ||||||||||||| ||| ||  ||| || ||||||||||||    
T  17439090 ctttagatgattttgagtgcctgaatatgtacaataatgattaggcaagtttttagattgggattgaacctgg 17439162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 122
Target Start/End: Complemental strand, 22996381 - 22996313
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaac 122  Q
    ||||||||| |||||||||||||||||||| ||| |||||||||| ||| ||  ||| |||||||||||    
T  22996381 ctttagatgattttgagtgcctgaatatgtataagaatgattaggcaagtttttagattgagattgaac 22996313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 97
Target Start/End: Original strand, 22010313 - 22010384
Alignment:
Q  26 attctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 97  Q
    ||||||| |||||||||||| || ||| | |||||||||||||||||||| || |||| |||||| ||||||    
T  22010313 attctgtatttttgactttttagttgaaccttagatgcttttgagtgccttaagatgtttaataaagattag 22010384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 13507672 - 13507742
Alignment:
Q  56 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctgg 126  Q
    ||||||| |||||||||||||||||||| |||||||||||||  ||| ||  ||| ||||| |||||||||    
T  13507672 ttagatgattttgagtgcctgaatatgtataataatgattagacaagtttttagattgagactgaacctgg 13507742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 13597204 - 13597274
Alignment:
Q  56 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctgg 126  Q
    ||||||| |||||||||||||||||||| |||||||||||||  ||| ||  ||| ||||| |||||||||    
T  13597204 ttagatgattttgagtgcctgaatatgtataataatgattagacaagtttttagattgagactgaacctgg 13597274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 96
Target Start/End: Complemental strand, 19899580 - 19899510
Alignment:
Q  26 attctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 96  Q
    ||||||| ||||||||||||||| ||| | ||||||| |||||||||||| || |||| || |||||||||    
T  19899580 attctgtatttttgacttttgagttgaaccttagatgtttttgagtgcctaaagatgtttattaatgatta 19899510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 377763 - 377714
Alignment:
Q  26 attctgtgtttttgacttttgagatgacctttagatgcttttgagtgcct 75  Q
    ||||||| ||||||||||||||| ||| | ||||||||||||||||||||    
T  377763 attctgtatttttgacttttgagttgaaccttagatgcttttgagtgcct 377714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 17353556 - 17353641
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 96  Q
    ||||||||||| |  ||||||| ||||||||||||||| ||| | ||||||| |||||||| |||||| ||| ||| ||| |||||    
T  17353556 cagagagcatgtagaattctgtatttttgacttttgagttgaaccttagatgtttttgagtccctgaagatgcctattaaagatta 17353641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 20465673 - 20465722
Alignment:
Q  26 attctgtgtttttgacttttgagatgacctttagatgcttttgagtgcct 75  Q
    ||||||| ||||||||||||||| ||| | ||||||||||||||||||||    
T  20465673 attctgtatttttgacttttgagttgaaccttagatgcttttgagtgcct 20465722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 249
Target Start/End: Complemental strand, 21285976 - 21285864
Alignment:
Q  136 agaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaatg 235  Q
    ||||| |||||| | ||||| ||||| ||||||| ||||||||||||||| |  ||||||| || |  | ||||||||||| | ||| ||| ||||||||    
T  21285976 agaatgaatttttgggagttacacctgaactcgctatggcgagtagaggccctcgcctcgcaagttgcccagttacagaatgctttg-ttaggttaaatg 21285878  T
Q  236 cgatctttgtcgca 249  Q
    |||||||| |||||    
T  21285877 cgatctttatcgca 21285864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 95
Target Start/End: Original strand, 37116085 - 37116126
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgatt 95  Q
    ||||||||| |||||||||||||||||||| |||||||||||    
T  37116085 ctttagatgattttgagtgcctgaatatgtataataatgatt 37116126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 122
Target Start/End: Complemental strand, 16800026 - 16799958
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaac 122  Q
    ||||||||| |||||||||||||||||||| ||| |||||||||| | | ||  ||| |||||||||||    
T  16800026 ctttagatgtttttgagtgcctgaatatgtataagaatgattaggcaggtttttagattgagattgaac 16799958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 24756221 - 24756157
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcct 75  Q
    ||||||||||| | |||||||| ||||| ||||||||| ||| | ||||||| ||||||||||||    
T  24756221 cagagagcatgtaggattctgtattttttacttttgagttgaaccttagatgtttttgagtgcct 24756157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 125
Target Start/End: Original strand, 982987 - 983058
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctg 125  Q
    ||||||||| ||||||||| ||||| |||| || || |||||||||||| ||  ||| ||||||||||||||    
T  982987 ctttagatgattttgagtgtctgaacatgtatattagtgattaggaaagtttttagattgagattgaacctg 983058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 97
Target Start/End: Original strand, 15602651 - 15602722
Alignment:
Q  26 attctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 97  Q
    |||||||  |||||||||||||| ||| | |||||||||||||||||||| || |||| || ||| ||||||    
T  15602651 attctgtaattttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttattaaagattag 15602722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 97
Target Start/End: Original strand, 15611103 - 15611174
Alignment:
Q  26 attctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 97  Q
    |||||||  |||||||||||||| ||| | |||||||||||||||||||| || |||| || ||| ||||||    
T  15611103 attctgtaattttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttattaaagattag 15611174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 125
Target Start/End: Complemental strand, 22365199 - 22365128
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctg 125  Q
    ||||||||| ||||||||||||  |||||| |||||||||||||| ||| ||  ||| |||| |||||||||    
T  22365199 ctttagatgattttgagtgcctagatatgtataataatgattaggcaagtttttagattgagtttgaacctg 22365128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 97
Target Start/End: Original strand, 30642925 - 30642996
Alignment:
Q  26 attctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 97  Q
    ||||||| ||||||||||||||| ||| | ||||||| |||||||||||| || |||| || ||| ||||||    
T  30642925 attctgtatttttgacttttgagttgaaccttagatgtttttgagtgcctaaagatgtttattaaagattag 30642996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 97
Target Start/End: Original strand, 16409898 - 16409960
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 97  Q
    |||||||||||||| ||| | |||||||||||||||||||| || |||| || ||| ||||||    
T  16409898 ttttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttattaaagattag 16409960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 97
Target Start/End: Original strand, 16860980 - 16861042
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 97  Q
    |||||||||||||| ||| | |||||||||||||||||||| || |||| || ||| ||||||    
T  16860980 ttttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttattaaagattag 16861042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 122
Target Start/End: Original strand, 19154472 - 19154538
Alignment:
Q  56 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaac 122  Q
    ||||||| |||||||| ||||||||||| | |||||||||||| ||| ||  ||| |||||||||||    
T  19154472 ttagatgattttgagttcctgaatatgtattataatgattagggaagtttttagactgagattgaac 19154538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 245
Target Start/End: Complemental strand, 21491344 - 21491263
Alignment:
Q  163 aactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaatgcgatctttgt 245  Q
    |||| |||||||||||||||||||| ||||||||||||      |||||||||| |||| |||| ||| ||||||||||||||    
T  21491344 aacttgccatggcgagtagaggctcttgcctcgcgagcgtttgtgttacagaatgcctt-tttaggttgaatgcgatctttgt 21491263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 23776467 - 23776517
Alignment:
Q  26 attctgtgtttttgacttttgagatga-cctttagatgcttttgagtgcct 75  Q
    ||||||| ||||||||||||||| ||| |||||||||| ||||||||||||    
T  23776467 attctgtatttttgacttttgagttgaacctttagatgtttttgagtgcct 23776517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 128
Target Start/End: Complemental strand, 23834649 - 23834532
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag-gaaagattggag 109  Q
    |||||||||||  |  ||||| |||||||||||||||| ||| | |||||||| ||||||| |||  |  |||||| || ||||||| ||| ||||  ||    
T  23834649 cagagagcatgtcattttctgagtttttgacttttgagttgaaccttagatgcctttgagtacctttaggtgtctactattgattagagaatgatt-tag 23834551  T
Q  110 aatgagattgaacctggaa 128  Q
    |||||||||||||||||||    
T  23834550 aatgagattgaacctggaa 23834532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 22029018 - 22028973
Alignment:
Q  26 attctgtgtttttgacttttgagatgacctttagatgcttttgagt 71  Q
    |||||| |||||||||||||||| ||| | ||||||||||||||||    
T  22029018 attctgagtttttgacttttgagttgaaccttagatgcttttgagt 22028973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 98
Target Start/End: Original strand, 17085760 - 17085804
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattagg 98  Q
    ||||||||  ||||||||||||||| |||| ||||||||||||||    
T  17085760 ctttagataattttgagtgcctgaacatgtataataatgattagg 17085804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 202
Target Start/End: Complemental strand, 17615269 - 17615229
Alignment:
Q  162 taactcgccatggcgagtagaggctcctgcctcgcgagcta 202  Q
    ||||||||| ||||||||||||||||  |||||||||||||    
T  17615269 taactcgccgtggcgagtagaggctctcgcctcgcgagcta 17615229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 18619938 - 18619894
Alignment:
Q  27 ttctgtgtttttgacttttgagatgacctttagatgcttttgagt 71  Q
    ||||| |||||||||||||||| ||| | ||||||||||||||||    
T  18619938 ttctgagtttttgacttttgagttgaaccttagatgcttttgagt 18619894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 21395630 - 21395686
Alignment:
Q  40 acttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 96  Q
    ||||||||| ||| | ||||||||||||||||||||||| |||  |||||| |||||    
T  21395630 acttttgagttgaaccttagatgcttttgagtgcctgaagatgcttaataaagatta 21395686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 21790123 - 21790179
Alignment:
Q  40 acttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 96  Q
    ||||||||| ||| | ||||||||||||||||||||||| |||  |||||| |||||    
T  21790123 acttttgagttgaaccttagatgcttttgagtgcctgaagatgcttaataaagatta 21790179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 22059158 - 22059198
Alignment:
Q  162 taactcgccatggcgagtagaggctcctgcctcgcgagcta 202  Q
    ||||||||| ||||||||||||||||  |||||||||||||    
T  22059158 taactcgccgtggcgagtagaggctctcgcctcgcgagcta 22059198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 22145155 - 22145195
Alignment:
Q  162 taactcgccatggcgagtagaggctcctgcctcgcgagcta 202  Q
    ||||||||| ||||||||||||||||  |||||||||||||    
T  22145155 taactcgccgtggcgagtagaggctctcgcctcgcgagcta 22145195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 24707576 - 24707616
Alignment:
Q  162 taactcgccatggcgagtagaggctcctgcctcgcgagcta 202  Q
    ||||||||| ||||||||||||||||  |||||||||||||    
T  24707576 taactcgccgtggcgagtagaggctctcgcctcgcgagcta 24707616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 135; Significance: 2e-70; HSPs: 80)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 35 - 249
Target Start/End: Complemental strand, 16097809 - 16097595
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    |||||||||||||| ||| | ||| ||| ||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  16097809 ttttgacttttgagttgatccttaaatgtttttgagtgtctgaacatgtctaataattattaggaaagattggagaatgagattgaacctgaaaagattt 16097710  T
Q  135 tagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaat 234  Q
    |||||| |||||| |||| ||| |||| |||||||||||| ||||||||||||  ||||||||||||||||||||||| |||  ||||||||||||||||    
T  16097709 tagaatgaatttttgtgaattggacctgaactcgccatggtgagtagaggctctcgcctcgcgagctaactagttacaaaatgtcttgtttatgttaaat 16097610  T
Q  235 gcgatctttgtcgca 249  Q
    |||||||||||||||    
T  16097609 gcgatctttgtcgca 16097595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 35 - 249
Target Start/End: Original strand, 12933952 - 12934166
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    |||||||||||||| ||| | ||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  12933952 ttttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacctggaaagattt 12934051  T
Q  135 tagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaact-agttacagaataccttgtttatgttaaa 233  Q
    |||||| || ||| ||||  || |||| |||||||||||||||| |||| |||  |||||||||| ||  |  |||||||| | ||||||||| ||||||    
T  12934052 tagaatgaaattttgtgaactgaacctgaactcgccatggcgagcagagactctcgcctcgcgag-tacttgtgttacagacttccttgtttaggttaaa 12934150  T
Q  234 tgcgatctttgtcgca 249  Q
    ||||||||||||||||    
T  12934151 tgcgatctttgtcgca 12934166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 35 - 249
Target Start/End: Complemental strand, 32308147 - 32307934
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| | |||| ||    
T  32308147 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatatctaataatgattaggaaagattggagaatgagattgaacctaggaagactt 32308048  T
Q  135 tagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaact-agttacagaataccttgtttatgttaaa 233  Q
    |||||| |||||| | ||  || |||| |||||||||||||||| ||||||||  |||||||||| ||  |  |||||| ||| ||||||||| ||||||    
T  32308047 tagaatgaatttt-gggaactgaacctgaactcgccatggcgagcagaggctctcgcctcgcgag-tacttgtgttacataatgccttgtttaggttaaa 32307950  T
Q  234 tgcgatctttgtcgca 249  Q
    ||||||||||||||||    
T  32307949 tgcgatctttgtcgca 32307934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 37 - 249
Target Start/End: Complemental strand, 9513387 - 9513174
Alignment:
Q  37 ttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagatttta 136  Q
    |||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  9513387 ttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacctgaaaagatttta 9513288  T
Q  137 gaat-taattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaact--agttacagaataccttgtttatgttaaa 233  Q
    ||||  |||||| ||||  |  |||| ||||| |||||||||| ||||||||  ||||  |||| | |||   |||||||||| ||||| ||||||||||    
T  9513287 gaatgaaatttttgtgaactaaacctgaactcaccatggcgagcagaggctctcgcct--cgagattacttgtgttacagaatgccttgcttatgttaaa 9513190  T
Q  234 tgcgatctttgtcgca 249  Q
    ||||||||||||||||    
T  9513189 tgcgatctttgtcgca 9513174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 37 - 249
Target Start/End: Complemental strand, 9521362 - 9521149
Alignment:
Q  37 ttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagatttta 136  Q
    |||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  9521362 ttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacctgaaaagatttta 9521263  T
Q  137 gaat-taattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaact--agttacagaataccttgtttatgttaaa 233  Q
    ||||  |||||| ||||  |  |||| ||||| |||||||||| ||||||||  ||||  |||| | |||   |||||||||| ||||| ||||||||||    
T  9521262 gaatgaaatttttgtgaactaaacctgaactcaccatggcgagcagaggctctcgcct--cgagattacttgtgttacagaatgccttgcttatgttaaa 9521165  T
Q  234 tgcgatctttgtcgca 249  Q
    ||||||||||||||||    
T  9521164 tgcgatctttgtcgca 9521149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 35 - 249
Target Start/End: Original strand, 49667726 - 49667939
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    |||||||||||||| ||| | ||||||| ||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  49667726 ttttgacttttgagttgatccttagatg-ttttgagcgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacctggaaagattt 49667824  T
Q  135 tagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaact-agttacagaataccttgtttatgttaaa 233  Q
    |||||| || | | ||||  || |||| |||||||||||||||| ||||||||  |||||||||| ||  |  |||||||| | ||||||||| ||||||    
T  49667825 tagaatgaaatattgtgaactgaacctgaactcgccatggcgagcagaggctctcgcctcgcgag-tacttgtgttacagactgccttgtttaggttaaa 49667923  T
Q  234 tgcgatctttgtcgca 249  Q
    | ||||||||||||||    
T  49667924 tacgatctttgtcgca 49667939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 54 - 247
Target Start/End: Complemental strand, 324695 - 324503
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaattaattttcgtgag 153  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||   |||   ||| ||||| |||||| | |||    
T  324695 ctttagatgattttgagtgcctgaatatgtataataatgattaggaaagattgtagaatgagattgaactgagaatagtttaagaatgaatttttgggag 324596  T
Q  154 ttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaatgcgatctttgtcg 247  Q
    |||||||| |||||||||| ||||||||||||||  |||||||||| || | |||||||||| |||||| ||| |||||||| || ||||||||    
T  324595 ttgcacctgaactcgccatagcgagtagaggctctcgcctcgcgagttaccaagttacagaacaccttg-ttaggttaaatgtgacctttgtcg 324503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 56 - 249
Target Start/End: Original strand, 1465072 - 1465265
Alignment:
Q  56 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaattaattttcgtgagtt 155  Q
    ||||||| |||||||||||||||  ||| | || ||||||| ||||||||| ||| |||||||||||||||||  |||| ||||  |||||  |||||||    
T  1465072 ttagatgtttttgagtgcctgaacttgtatgatgatgattatgaaagattgtagattgagattgaacctggaataatttaagaacgaatttgtgtgagtt 1465171  T
Q  156 gcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaatgcgatctttgtcgca 249  Q
    |||||| |||| ||||||||||||||||||||  ||||||||||||||| ||||||||||| ||||||||| |||||| |  ||||||||||||    
T  1465172 gcacctgaacttgccatggcgagtagaggctctcgcctcgcgagctaaccagttacagaatgccttgtttaggttaaaagtaatctttgtcgca 1465265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 11 - 216
Target Start/End: Original strand, 17247904 - 17248109
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||||||  |||||||||  ||| |||||||||||||| ||| | ||||||| ||||||||||||||| |||||||||||||||||||||||| || |||    
T  17247904 cagagaggttgcaagatttcgtgattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 17248003  T
Q  111 atgagattgaacctggaaagattttagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagtta 210  Q
    |||||||||||||||||||||||||||||| ||  || | || |   |||| |||||||||||||||| ||||||||  ||||||||||  | | |||||    
T  17248004 atgagattgaacctggaaagattttagaatgaaactttgggaatctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccagtta 17248103  T
Q  211 cagaat 216  Q
    ||||||    
T  17248104 cagaat 17248109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 35 - 184
Target Start/End: Original strand, 49389286 - 49389434
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    |||||||||||||| ||| | ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||    
T  49389286 ttttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggagagactt 49389385  T
Q  135 tagaattaattttcgtgagttgcaccttaactcgccatggcgagtagagg 184  Q
    |||||| |||||| ||||  || |||| |||||||||||||||| |||||    
T  49389386 tagaatgaatttt-gtgaactgaacctgaactcgccatggcgagcagagg 49389434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 35 - 247
Target Start/End: Complemental strand, 14234969 - 14234758
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    ||||||| ||| || ||| | ||||||  ||||||||||||||| |||| |||| ||||||||||||||||  ||| |||||||||||| | ||| | ||    
T  14234969 ttttgacctttaagttgaaccttagatttttttgagtgcctgaacatgtataatgatgattaggaaagattatagattgagattgaacccg-aaatagtt 14234871  T
Q  135 tagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaat 234  Q
     ||||| |||||| | ||||||||||| ||||||||||||||||||||||| |  ||||||| ||||||| ||||||||||| ||||||||| |||||||    
T  14234870 aagaatgaatttttgggagttgcacctgaactcgccatggcgagtagaggccctcgcctcgcaagctaaccagttacagaatgccttgtttaggttaaat 14234771  T
Q  235 gcgatctttgtcg 247  Q
    | |||||||||||    
T  14234770 gtgatctttgtcg 14234758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 11 - 199
Target Start/End: Original strand, 40213339 - 40213527
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||||||| |||||||||  ||| |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||     
T  40213339 cagagagcttgcaagatttcgtgattttgacttttgagttgatcattagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 40213438  T
Q  111 atgagattgaacctggaaagattttagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgag 199  Q
    ||||||||||||||||||||||| |||||| || ||| | || |   |||| ||||||||| |||||| ||||||||  ||||||||||    
T  40213439 atgagattgaacctggaaagattgtagaatgaacttttgggaatctaacctgaactcgccacggcgagcagaggctctcgcctcgcgag 40213527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 14 - 131
Target Start/End: Complemental strand, 14573088 - 14572971
Alignment:
Q  14 agagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatg 113  Q
    ||||||||||||||| ||||||||||||||||||| ||| | |||||||| |||||||||||||| |||||||||||||||||||||||| || ||||||    
T  14573088 agagcatgcaagattttgtgtttttgacttttgagttgatccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatg 14572989  T
Q  114 agattgaacctggaaaga 131  Q
    ||||||||||||||||||    
T  14572988 agattgaacctggaaaga 14572971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 35 - 249
Target Start/End: Original strand, 1644325 - 1644538
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    |||||||||||||| ||| | || |||| ||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||  |||| ||    
T  1644325 ttttgacttttgagttgatccttggatgtttttgagtgcctgaacatgtctgataatgattaggaaagattagagaatgagattgaacctgagaagactt 1644424  T
Q  135 tagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaact-agttacagaataccttgtttatgttaaa 233  Q
    |||||| |||||| ||||  || |||| |||||||||||||||| ||||||||  |||||||||| ||  |  |||||| | | ||||||||| ||||||    
T  1644425 tagaatgaatttt-gtgaactgaacctgaactcgccatggcgagcagaggctctcgcctcgcgag-tacttgtgttacaaactgccttgtttaagttaaa 1644522  T
Q  234 tgcgatctttgtcgca 249  Q
    ||||||| ||||||||    
T  1644523 tgcgatccttgtcgca 1644538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 11 - 134
Target Start/End: Original strand, 11424381 - 11424504
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  ||| |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||| | || |||    
T  11424381 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaataatgtaga 11424480  T
Q  111 atgagattgaacctggaaagattt 134  Q
    ||||||||||||||||||||||||    
T  11424481 atgagattgaacctggaaagattt 11424504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 11 - 134
Target Start/End: Complemental strand, 18439037 - 18438914
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  ||| |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || | |    
T  18439037 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaaa 18438938  T
Q  111 atgagattgaacctggaaagattt 134  Q
    ||||||||||||||||||||||||    
T  18438937 atgagattgaacctggaaagattt 18438914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 35 - 249
Target Start/End: Original strand, 12171759 - 12171960
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    ||||||||||| || ||| | ||||||| ||||||||||||||| |||||||||||||||||||||||||             |||||||||| ||| ||    
T  12171759 ttttgactttttagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagat-------------tgaacctggagagactt 12171845  T
Q  135 tagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaat 234  Q
    |||||| |||||| ||||  || |||| |||| ||||||||||||||||||||  ||||||||| ||||||||||||||||| ||||||||| |||||||    
T  12171846 tagaatgaatttttgtgaactgaacctgaactggccatggcgagtagaggctctcgcctcgcgatctaactagttacagaatgccttgtttaggttaaat 12171945  T
Q  235 gcgatctttgtcgca 249  Q
    |||||  ||||||||    
T  12171946 gcgattcttgtcgca 12171960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 35 - 249
Target Start/End: Complemental strand, 15471403 - 15471190
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    ||||||| |||||| ||| | ||||||| |||||||| |||||| |||| |||| ||||||||||||||||||||| | |||||||||||||||   |||    
T  15471403 ttttgacctttgagttgaaccttagatgtttttgagtccctgaacatgtataatgatgattaggaaagattggagattaagattgaacctggaatagttt 15471304  T
Q  135 tagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaat 234  Q
     ||||  |||||| | ||||| ||||| ||||||||||||||||||||||| |  |||||| || ||  | ||||||||||| | ||||||| |||||||    
T  15471303 aagaacgaatttt-gagagttacacctgaactcgccatggcgagtagaggccctcgcctcgtgaactgcccagttacagaatgctttgtttaggttaaat 15471205  T
Q  235 gcgatctttgtcgca 249  Q
    |||||||||||||||    
T  15471204 gcgatctttgtcgca 15471190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 11 - 140
Target Start/End: Original strand, 25476003 - 25476132
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||||||||||||||||| |||| |||||||||||||| ||| | ||||||| |||||||| |||||| ||||||||||||||||| |||||| || |||    
T  25476003 cagagagcatgcaagattttgtgattttgacttttgagttgatccttagatgtttttgagtacctgaacatgtctaataatgattatgaaagaatgtaga 25476102  T
Q  111 atgagattgaacctggaaagattttagaat 140  Q
    ||||||| ||||||||||||||||||||||    
T  25476103 atgagatcgaacctggaaagattttagaat 25476132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 11 - 140
Target Start/End: Complemental strand, 26687390 - 26687261
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  ||| |||||||||||||| ||| | |||||||||||||||||||| || |||||||||||||||||||||||| || ||     
T  26687390 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctaaacatgtctaataatgattaggaaagaatgtagg 26687291  T
Q  111 atgagattgaacctggaaagattttagaat 140  Q
    ||||||||||||||||||||||| ||||||    
T  26687290 atgagattgaacctggaaagattgtagaat 26687261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 14179825 - 14179705
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  || ||||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || |||    
T  14179825 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 14179726  T
Q  111 atgagattgaacctggaaaga 131  Q
    |||||||||||| ||||||||    
T  14179725 atgagattgaacttggaaaga 14179705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 12 - 140
Target Start/End: Complemental strand, 17488359 - 17488231
Alignment:
Q  12 agagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaa 111  Q
    |||||||||||||||||  |||  ||||||||||||||||| | |||||||| |||||||||||||| |||||||||||||||||||||||| || || |    
T  17488359 agagagcatgcaagatttcgtgaatttgacttttgagatgatccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtagga 17488260  T
Q  112 tgagattgaacctggaaagattttagaat 140  Q
    |||||||||||||||||||||| ||||||    
T  17488259 tgagattgaacctggaaagattgtagaat 17488231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 11 - 249
Target Start/End: Complemental strand, 12340255 - 12340018
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  ||| |||||||||||||| ||| | |||||||| |||||||||||||| |||||||||| ||||||||||||| || ||     
T  12340255 cagagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtagg 12340156  T
Q  111 atgagattgaacctggaaagattttagaat-taattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactag-- 207  Q
    |||||||||||||||||||||  |||||||  || ||| | ||  |  | || |||||||||||||||| ||||||||  |||||||||||  |||||      
T  12340155 atgagattgaacctggaaaga-cttagaatgaaactttggaga-atctaactgaactcgccatggcgagcagaggctctcgcctcgcgagc--actagta 12340060  T
Q  208 ttacagaataccttgtttatgttaaatgcgatctttgtcgca 249  Q
    ||||| ||| ||||||||| |||||||| |||||||||||||    
T  12340059 ttacataatgccttgtttaggttaaatgtgatctttgtcgca 12340018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 11 - 249
Target Start/End: Original strand, 13209946 - 13210183
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  || ||||||||||||||| ||| | |||||||||||||||||||| || ||||||||| ||||||||||||||  | |||    
T  13209946 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctaaacatgtctaat-atgattaggaaagaaagtaga 13210044  T
Q  111 atgagattgaacctggaaagattttagaattaattttcgtgag-ttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagtt 209  Q
    |||||||||||||||||||||  ||||||| ||   || ||||  ||   |  |||||||||||||||||||||||||  |||||||||||      |||    
T  13210045 atgagattgaacctggaaaga-cttagaatgaaaactcttgagaatgtgaccgaactcgccatggcgagtagaggctctcgcctcgcgagcacttgtgtt 13210143  T
Q  210 acagaataccttgtttatgttaaatgcgatctttgtcgca 249  Q
    ||||||| ||||||||| |||||||| |||||||||||||    
T  13210144 acagaatgccttgtttaggttaaatgtgatctttgtcgca 13210183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 11 - 139
Target Start/End: Complemental strand, 14973357 - 14973229
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||||||| |||||||||  ||| |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || |||    
T  14973357 cagagagcttgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 14973258  T
Q  111 atgagattgaacctggaaagattttagaa 139  Q
    |||||||| |||| | |||||||||||||    
T  14973257 atgagattaaaccagaaaagattttagaa 14973229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 12 - 140
Target Start/End: Complemental strand, 17499841 - 17499713
Alignment:
Q  12 agagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaa 111  Q
    |||||| ||||||||||   || |||||||||||||||||| | |||||||| |||||||||||||| |||||||||||||||||||||||| || || |    
T  17499841 agagagaatgcaagatttcatgattttgacttttgagatgatccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtagga 17499742  T
Q  112 tgagattgaacctggaaagattttagaat 140  Q
    |||||||||||||||||||||| ||||||    
T  17499741 tgagattgaacctggaaagattgtagaat 17499713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 35 - 249
Target Start/End: Complemental strand, 16104259 - 16104046
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    |||||||||||||| ||| | ||||||| || |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| |||| ||    
T  16104259 ttttgacttttgagttgatccttagatgtttctgagtgcctgaacatgtctaataatgattaggaaagattggagaatgaggttgaacctgggaagactt 16104160  T
Q  135 tagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaat 234  Q
    |||| | |||||| |||| ||| | |  |||||| | ||||||| ||||||||  |||||| |||       |||||||| | ||||||||| |||||||    
T  16104159 tagattgaatttt-gtgaattgaatccgaactcgtcgtggcgagcagaggctctcgcctcgtgagtactggtgttacagactgccttgtttaggttaaat 16104061  T
Q  235 gcgatctttgtcgca 249  Q
    ||| |||||||||||    
T  16104060 gcgctctttgtcgca 16104046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 20698065 - 20698182
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||||||||||||||||| |||  |||||||||||||| ||| | ||||||||||||||||| ||||| |||||||||||||||||||||||| || ||     
T  20698065 cagagagcatgcaagattttgtaattttgacttttgagttgaaccttagatgcttttgagtgtctgaacatgtctaataatgattaggaaagaatgtagg 20698164  T
Q  111 atgagattgaacctggaa 128  Q
    ||||||||||||||||||    
T  20698165 atgagattgaacctggaa 20698182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 11 - 249
Target Start/End: Complemental strand, 14666108 - 14665871
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||||||||||||||||| | || |||||||||||||| ||| | |||||||   ||||||||||||| ||| |||||| ||||||||||||| || ||     
T  14666108 cagagagcatgcaagattttatgattttgacttttgagttgaaccttagatgtcgttgagtgcctgaacatggctaatattgattaggaaagaatgtagg 14666009  T
Q  111 atgagattgaacctggaaagattttagaat-taattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactag-- 207  Q
    |||||||||||||||||||||  |||||||  || ||| | || |   | || ||||||| |||||||| ||||||||  |||||||||||  |||||      
T  14666008 atgagattgaacctggaaaga-cttagaatgaaactttggagaatctga-ctgaactcgcaatggcgagcagaggctctcgcctcgcgagc--actagta 14665913  T
Q  208 ttacagaataccttgtttatgttaaatgcgatctttgtcgca 249  Q
    ||||||||| ||||||||| ||||||||||||||||||||||    
T  14665912 ttacagaatgccttgtttaggttaaatgcgatctttgtcgca 14665871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 11 - 249
Target Start/End: Complemental strand, 14735621 - 14735384
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||||||||||||||||| | || |||||||||||||| ||| | |||||||   ||||||||||||| ||| |||||| ||||||||||||| || ||     
T  14735621 cagagagcatgcaagattttatgattttgacttttgagttgaaccttagatgtcgttgagtgcctgaacatggctaatattgattaggaaagaatgtagg 14735522  T
Q  111 atgagattgaacctggaaagattttagaat-taattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactag-- 207  Q
    |||||||||||||||||||||  |||||||  || ||| | || |   | || ||||||| |||||||| ||||||||  |||||||||||  |||||      
T  14735521 atgagattgaacctggaaaga-cttagaatgaaactttggagaatctga-ctgaactcgcaatggcgagcagaggctctcgcctcgcgagc--actagta 14735426  T
Q  208 ttacagaataccttgtttatgttaaatgcgatctttgtcgca 249  Q
    ||||||||| ||||||||| ||||||||||||||||||||||    
T  14735425 ttacagaatgccttgtttaggttaaatgcgatctttgtcgca 14735384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 15 - 199
Target Start/End: Original strand, 53070321 - 53070504
Alignment:
Q  15 gagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatga 114  Q
    |||| |||||||||  ||| |||||||||||||| ||| | ||||||||||||||||||||||| |||| ||||||||||||||||||| || |||||||    
T  53070321 gagcttgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatga 53070420  T
Q  115 gattgaacctggaaagattttagaattaa-ttttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgag 199  Q
    |||||||||||| |  | || ||||| || |||| |  || || |||| |||||||||||||||||||||||||  ||||||||||    
T  53070421 gattgaacctgg-attaattaagaatgaactttttggaagctg-acctgaactcgccatggcgagtagaggctctcgcctcgcgag 53070504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 14576451 - 14576571
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  ||| |||||||||||||| ||| | |||||||| |||||||||||||| ||||||||| |||||||| ||||| || |||    
T  14576451 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcctttgagtgcctgaacatgtctaattatgattagaaaagaatgtaga 14576550  T
Q  111 atgagattgaacctggaaaga 131  Q
    |||| ||||||||||||||||    
T  14576551 atgacattgaacctggaaaga 14576571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 249
Target Start/End: Complemental strand, 14669263 - 14669026
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  ||| |||||||||||||| ||| | |||||||   ||||||||||||| |||||||||| ||| ||||||||| || ||     
T  14669263 cagagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgtcgttgagtgcctgaacatgtctaatattgaataggaaagaatgtagg 14669164  T
Q  111 atgagattgaacctggaaagattttagaat-taattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactag-- 207  Q
    |||||||||||||||||||||  |||||||  || ||| | || |   | || |||||||||||||||| ||||||||   ||||||||||  |||||      
T  14669163 atgagattgaacctggaaaga-cttagaatgaaactttggagaatctga-ctgaactcgccatggcgagcagaggctctcacctcgcgagc--actagta 14669068  T
Q  208 ttacagaataccttgtttatgttaaatgcgatctttgtcgca 249  Q
    ||||||||| ||||||||| ||||||| ||||||||||||||    
T  14669067 ttacagaatgccttgtttaggttaaattcgatctttgtcgca 14669026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 198
Target Start/End: Original strand, 23082979 - 23083167
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||||||||||  ||||| |||| |||||||||||||| ||| | ||||||||||||||||||||| |||||||||||| ||||||||| | | || ||     
T  23082979 cagagagcatgtcagattttgtgattttgacttttgagttgatccttagatgcttttgagtgcctggatatgtctaatagtgattaggacaaaatgtagg 23083078  T
Q  111 atgagattgaacctggaaagattttagaattaa--ttttcgtgagt-tgcaccttaactcgccatggcgagtagaggctcctgcctcgcga 198  Q
    ||||||||| ||||||||||| |||||||| ||  |||| | || | ||  |||||||||||||||||||||||||||||  |||||||||    
T  23083079 atgagattggacctggaaaga-tttagaatgaaactttttg-gattctgacccttaactcgccatggcgagtagaggctctcgcctcgcga 23083167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 13 - 245
Target Start/End: Original strand, 12851984 - 12852215
Alignment:
Q  13 gagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaat 112  Q
    ||||||||||||||||  ||| |||||||||||||| | | ||||||||||  ||||||||||||| |||||||||| ||||||||||||| || || ||    
T  12851984 gagagcatgcaagatttcgtgattttgacttttgagtttaactttagatgcccttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggat 12852083  T
Q  113 gagattgaacctggaaagattttagaattaa--ttttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactag--t 208  Q
    ||||||||| |||||||||  ||||||| ||  ||||  | |  ||   || |||||||||||||||| |||||||| ||||||||||||  ||| |  |    
T  12852084 gagattgaatctggaaaga-cttagaatgaaacttttgataatctg--actgaactcgccatggcgagcagaggctcttgcctcgcgagc--acttgtat 12852178  T
Q  209 tacagaataccttgtttatgttaaatgcgatctttgt 245  Q
    |||||||| || |||||| ||||||||||||| ||||    
T  12852179 tacagaatgccatgtttaggttaaatgcgatccttgt 12852215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 101
Target Start/End: Complemental strand, 12399698 - 12399608
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaa 101  Q
    |||||||||||| ||||| |||  |||||||||||||| ||| | ||||||||||||||||||||||| ||||||||||||||||||||||    
T  12399698 cagagagcatgctagattttgtaattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaa 12399608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 120
Target Start/End: Complemental strand, 43842681 - 43842572
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||   || ||||||||||| || ||| | ||||||||||||||||||||||  |||||||||||||||||||||||| || ||     
T  43842681 cagagagcatgcaagatttcatgattttgactttttagttgatccttagatgcttttgagtgcctgagcatgtctaataatgattaggaaagaatgtagg 43842582  T
Q  111 atgagattga 120  Q
    ||||||||||    
T  43842581 atgagattga 43842572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 35 - 131
Target Start/End: Original strand, 4588457 - 4588553
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaaga 131  Q
    |||||||||||||| ||| | |||||||| |||||||||||||| |||||||||| ||||||||||||| || || ||||||||||||||| |||||    
T  4588457 ttttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctgtaaaga 4588553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 63 - 140
Target Start/End: Complemental strand, 13442725 - 13442648
Alignment:
Q  63 cttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaat 140  Q
    |||||||||||||||| |||||||||||||||||||||| | || || ||||||||||||||||||||||| ||||||    
T  13442725 cttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtaggatgagattgaacctggaaagattgtagaat 13442648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 128
Target Start/End: Complemental strand, 30030331 - 30030214
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  ||   ||||||||||||| ||| | |||||||| |||||||| ||||| ||||||||||||||||| |||||| ||  |     
T  30030331 cagagagcatgcaagatttcgtaaatttgacttttgagttgaaccttagatgcctttgagtgtctgaacatgtctaataatgattacgaaagaatgtggg 30030232  T
Q  111 atgagattgaacctggaa 128  Q
    ||||||||||||||||||    
T  30030231 atgagattgaacctggaa 30030214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 55 - 185
Target Start/End: Original strand, 52523389 - 52523519
Alignment:
Q  55 tttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaattaattttcgtgagt 154  Q
    |||||||| ||||||||||||||| |||| ||||||| |||||||||||||  ||  ||| |||||||||||||   ||| |||||  ||||| | ||||    
T  52523389 tttagatgattttgagtgcctgaacatgtgtaataattattaggaaagattctagtttgatattgaacctggaacagtttaagaatggatttttgggagt 52523488  T
Q  155 tgcaccttaactcgccatggcgagtagaggc 185  Q
    | ||||| |||||||||| ||||||||||||    
T  52523489 tacacctgaactcgccatagcgagtagaggc 52523519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 112
Target Start/End: Original strand, 17247142 - 17247239
Alignment:
Q  15 gagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaat 112  Q
    |||| |||||||||  ||| |||||||||||||| ||| | ||||||| ||||||||||| ||| |||||||||||||||||||||||| || |||||    
T  17247142 gagcttgcaagatttcgtgattttgacttttgagttgatccttagatgtttttgagtgccggaacatgtctaataatgattaggaaagaatgtagaat 17247239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 56 - 187
Target Start/End: Original strand, 2050864 - 2050993
Alignment:
Q  56 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaattaattttcgtgagtt 155  Q
    ||||||| |||||||||||| || |||| |||||||||||||||||||||  ||| ||||||||||||  |||   ||| |||||  ||||| | |||||    
T  2050864 ttagatgtttttgagtgcctcaacatgtgtaataatgattaggaaagattctagattgagattgaacc--gaatagtttaagaatggatttttgggagtt 2050961  T
Q  156 gcaccttaactcgccatggcgagtagaggctc 187  Q
     ||||| ||||| |||| ||||||||||||||    
T  2050962 acacctgaactctccatagcgagtagaggctc 2050993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 12 - 128
Target Start/End: Complemental strand, 16809887 - 16809775
Alignment:
Q  12 agagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaa 111  Q
    ||||||||||| |||||  || ||||||||||||||| ||| | ||| |||||||||||||| |||| |    ||||||||||||||||||| || || |    
T  16809887 agagagcatgctagatttcgtatttttgacttttgagttgaaccttaaatgcttttgagtgcttgaaca----taataatgattaggaaagaatgtagga 16809792  T
Q  112 tgagattgaacctggaa 128  Q
    ||||||||| |||||||    
T  16809791 tgagattgatcctggaa 16809775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 126
Target Start/End: Complemental strand, 45797703 - 45797631
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctgg 126  Q
    ||||||||| |||||||||||||||||||| |||||||||||||| ||| ||  ||| |||||||| ||||||    
T  45797703 ctttagatgattttgagtgcctgaatatgtataataatgattaggtaagtttttagattgagattggacctgg 45797631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 14501657 - 14501587
Alignment:
Q  56 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctgg 126  Q
    ||||||| |||||||||||||||||||| |||||||||||||| ||| ||  ||| |||||||| ||||||    
T  14501657 ttagatgattttgagtgcctgaatatgtataataatgattaggcaaggttttagattgagattggacctgg 14501587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 122
Target Start/End: Complemental strand, 23275199 - 23275133
Alignment:
Q  56 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaac 122  Q
    ||||||| |||||||||||||||||||| |||||||||||||| ||| ||  ||| |||||||||||    
T  23275199 ttagatgattttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaac 23275133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 129
Target Start/End: Original strand, 605954 - 606027
Alignment:
Q  56 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaa 129  Q
    ||||||| |||||||||||||||| ||| |||||||||||||| ||  ||  ||| ||||||||||||||||||    
T  605954 ttagatgattttgagtgcctgaatgtgtataataatgattaggcaattttctagattgagattgaacctggaaa 606027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 15877447 - 15877532
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 96  Q
    ||||||||||||||||||  ||  |||||||||||||| ||| | ||||||| ||||||||||||||| ||| ||| ||| |||||    
T  15877447 cagagagcatgcaagatttcgtagttttgacttttgagttgaaccttagatgtttttgagtgcctgaagatgcctattaaagatta 15877532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 316656 - 316612
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattagg 98  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||    
T  316656 ctttagatgtttttgagtgcctgaatatgtataataatgattagg 316612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 122
Target Start/End: Complemental strand, 21837959 - 21837892
Alignment:
Q  55 tttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaac 122  Q
    |||||||| ||||||||| |||||||||| |||||||||||||| ||| ||  ||| |||||||||||    
T  21837959 tttagatgattttgagtgtctgaatatgtataataatgattaggcaagtttttagattgagattgaac 21837892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 125
Target Start/End: Original strand, 22109936 - 22110007
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctg 125  Q
    ||||||||| ||||||||||||||| |||| |||||||||||||| ||| ||  ||  ||||||||||||||    
T  22109936 ctttagatgtttttgagtgcctgaacatgtataataatgattaggcaagtttttagtttgagattgaacctg 22110007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 12378454 - 12378384
Alignment:
Q  56 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctgg 126  Q
    ||||||| ||||||||||||||||||||  ||||||||||||| | | ||  ||| |||||||||||||||    
T  12378454 ttagatgattttgagtgcctgaatatgtacaataatgattaggcatgtttttagattgagattgaacctgg 12378384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 23412836 - 23412906
Alignment:
Q  56 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctgg 126  Q
    ||||||| |||||||||||||||||||| ||| |||||||||| ||| ||  ||| |||||||| ||||||    
T  23412836 ttagatgattttgagtgcctgaatatgtataaaaatgattaggcaagtttttagattgagattggacctgg 23412906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 11298163 - 11298212
Alignment:
Q  26 attctgtgtttttgacttttgagatgacctttagatgcttttgagtgcct 75  Q
    ||||||| ||||||||||||||| ||| | ||||||||||||||||||||    
T  11298163 attctgtatttttgacttttgagttgaaccttagatgcttttgagtgcct 11298212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 75
Target Start/End: Original strand, 26190647 - 26190692
Alignment:
Q  30 tgtgtttttgacttttgagatgacctttagatgcttttgagtgcct 75  Q
    ||||||||||||||||||| ||| | ||||||||||||||||||||    
T  26190647 tgtgtttttgacttttgagttgaaccttagatgcttttgagtgcct 26190692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 126
Target Start/End: Complemental strand, 43927640 - 43927568
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctgg 126  Q
    ||||||||| ||||||||||||||| |||| |||||||||||||  ||| ||  ||| |||| ||||||||||    
T  43927640 ctttagatgattttgagtgcctgaacatgtataataatgattagacaagtttttagattgagtttgaacctgg 43927568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 75
Target Start/End: Original strand, 321634 - 321697
Alignment:
Q  12 agagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcct 75  Q
    |||||||||| |  ||||||| ||||||||||||||| ||| | ||||||| ||||||||||||    
T  321634 agagagcatgtagaattctgtatttttgacttttgagttgaaccttagatgtttttgagtgcct 321697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 97
Target Start/End: Complemental strand, 12173270 - 12173199
Alignment:
Q  26 attctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 97  Q
    ||||||| ||||||||||||||| ||| | ||||||| |||||||||||| || |||| || ||| ||||||    
T  12173270 attctgtatttttgacttttgagttgaaccttagatgtttttgagtgcctaaagatgtttattaaagattag 12173199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 97
Target Start/End: Complemental strand, 12496739 - 12496668
Alignment:
Q  26 attctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 97  Q
    |||||||  |||||||||||||| ||| | |||||||||||||||||||| || |||| || ||| ||||||    
T  12496739 attctgtaattttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttattaaagattag 12496668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 97
Target Start/End: Original strand, 18383551 - 18383622
Alignment:
Q  26 attctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 97  Q
    |||||||  |||||||||||||| ||| | |||||||||||||||||||| || |||| || ||| ||||||    
T  18383551 attctgtaattttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttattaaagattag 18383622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 97
Target Start/End: Original strand, 23077112 - 23077183
Alignment:
Q  26 attctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 97  Q
    ||||||| ||||||||||||||| ||| | || ||||||||||||||||| || |||| || ||| ||||||    
T  23077112 attctgtatttttgacttttgagttgaaccttggatgcttttgagtgccttaagatgtttattaaagattag 23077183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 96
Target Start/End: Complemental strand, 856620 - 856550
Alignment:
Q  26 attctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 96  Q
    ||||||| |||||||||||| || ||| | |||||||||||||||||||| || |||| || ||| |||||    
T  856620 attctgtatttttgactttttagttgaaccttagatgcttttgagtgcctaaagatgtttattaaagatta 856550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 224
Target Start/End: Complemental strand, 14572944 - 14572878
Alignment:
Q  158 accttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtt 224  Q
    |||| |||||||||||||||||||||||||  ||||||||||  | ||||  ||||| |||||||||    
T  14572944 acctgaactcgccatggcgagtagaggctctcgcctcgcgagtgacctagaaacagagtaccttgtt 14572878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 96
Target Start/End: Complemental strand, 15060776 - 15060706
Alignment:
Q  26 attctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 96  Q
    |||||||  |||||||||||||| ||| | |||||||||||||||||||| || |||| || ||| |||||    
T  15060776 attctgtaattttgacttttgagttgaaccttagatgcttttgagtgcctaaagatgtttattaaagatta 15060706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 249
Target Start/End: Original strand, 37250936 - 37251021
Alignment:
Q  163 aactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaatgcgatctttgtcgca 249  Q
    |||||||||| ||||||||||||||  |||||||||| |  | |||||||||| |||||| ||| |||||| | || ||||||||||    
T  37250936 aactcgccatagcgagtagaggctctcgcctcgcgagttgcccagttacagaacaccttg-ttaggttaaaagtgacctttgtcgca 37251021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 4588602 - 4588643
Alignment:
Q  208 ttacagaataccttgtttatgttaaatgcgatctttgtcgca 249  Q
    ||||||||| ||||||||| ||||||||||| ||||||||||    
T  4588602 ttacagaatgccttgtttaggttaaatgcgagctttgtcgca 4588643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 2034751 - 2034791
Alignment:
Q  162 taactcgccatggcgagtagaggctcctgcctcgcgagcta 202  Q
    ||||||||| ||||||||||||||||  |||||||||||||    
T  2034751 taactcgccgtggcgagtagaggctctcgcctcgcgagcta 2034791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 2038258 - 2038298
Alignment:
Q  162 taactcgccatggcgagtagaggctcctgcctcgcgagcta 202  Q
    ||||||||| ||||||||||||||||  |||||||||||||    
T  2038258 taactcgccgtggcgagtagaggctctcgcctcgcgagcta 2038298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 2041999 - 2042039
Alignment:
Q  162 taactcgccatggcgagtagaggctcctgcctcgcgagcta 202  Q
    ||||||||| ||||||||||||||||  |||||||||||||    
T  2041999 taactcgccgtggcgagtagaggctctcgcctcgcgagcta 2042039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 3389600 - 3389640
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcct 75  Q
    |||||||||||||| ||| | ||||||||||||||||||||    
T  3389600 ttttgacttttgagttgaaccttagatgcttttgagtgcct 3389640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 3402609 - 3402649
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcct 75  Q
    |||||||||||||| ||| | ||||||||||||||||||||    
T  3402609 ttttgacttttgagttgaaccttagatgcttttgagtgcct 3402649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 122
Target Start/End: Complemental strand, 9578138 - 9578070
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaac 122  Q
    |||||||||  |||||||||||||| |||| | |||||||||||| ||||||  ||| ||| |||||||    
T  9578138 ctttagatgactttgagtgcctgaacatgtatgataatgattaggcaagattttagattgaaattgaac 9578070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 202
Target Start/End: Complemental strand, 14038529 - 14038489
Alignment:
Q  162 taactcgccatggcgagtagaggctcctgcctcgcgagcta 202  Q
    ||||||||| ||||||||||||||||  |||||||||||||    
T  14038529 taactcgccgtggcgagtagaggctctcgcctcgcgagcta 14038489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 202
Target Start/End: Complemental strand, 14041997 - 14041957
Alignment:
Q  162 taactcgccatggcgagtagaggctcctgcctcgcgagcta 202  Q
    ||||||||| ||||||||||||||||  |||||||||||||    
T  14041997 taactcgccgtggcgagtagaggctctcgcctcgcgagcta 14041957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 15009926 - 15009966
Alignment:
Q  162 taactcgccatggcgagtagaggctcctgcctcgcgagcta 202  Q
    ||||||||| ||||||||||||||||  |||||||||||||    
T  15009926 taactcgccgtggcgagtagaggctcacgcctcgcgagcta 15009966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 17674218 - 17674258
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcct 75  Q
    |||||||||||||| ||| | ||||||||||||||||||||    
T  17674218 ttttgacttttgagttgaaccttagatgcttttgagtgcct 17674258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 202
Target Start/End: Complemental strand, 18959246 - 18959206
Alignment:
Q  162 taactcgccatggcgagtagaggctcctgcctcgcgagcta 202  Q
    ||||||||| ||||||||||||||||  |||||||||||||    
T  18959246 taactcgccgtggcgagtagaggctctcgcctcgcgagcta 18959206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 126
Target Start/End: Original strand, 37250773 - 37250845
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctgg 126  Q
    ||||||||| || |||||  ||||| |||| |||||||||||||| ||| ||  ||| |||||||||||||||    
T  37250773 ctttagatgattctgagtatctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgg 37250845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 202
Target Start/End: Complemental strand, 39231076 - 39231036
Alignment:
Q  162 taactcgccatggcgagtagaggctcctgcctcgcgagcta 202  Q
    ||||||||| ||||||||||||||||  |||||||||||||    
T  39231076 taactcgccgtggcgagtagaggctctcgcctcgcgagcta 39231036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 35 - 249
Target Start/End: Original strand, 45431 - 45646
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    |||| ||||||||| ||| | ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||    
T  45431 tttttacttttgagttgatccttagatgtttttgagtgcctgaatatgtctaataatgattaggaaagattggggaatgagattgaacctggtaagactt 45530  T
Q  135 tagaattaa-ttttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaa 233  Q
    |||||| || |||| |||| ||| |||| |||||||||||||||||||||||||  |||||||||||||||||||||||||||  |||||||| | ||||    
T  45531 tagaatgaattttttgtgaattgtacctgaactcgccatggcgagtagaggctctcgcctcgcgagctaactagttacagaatgtcttgtttaggataaa 45630  T
Q  234 tgcgatctttgtcgca 249  Q
    ||||||||||||||||    
T  45631 tgcgatctttgtcgca 45646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1984 (Bit Score: 121; Significance: 4e-62; HSPs: 1)
Name: scaffold1984
Description:

Target: scaffold1984; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 35 - 247
Target Start/End: Complemental strand, 609 - 397
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    |||||||||||||  ||| | |||||   |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  609 ttttgacttttgaattgatccttagacttttttgagtgcctaaacatgtctaataatgattaggaaagattggagaatgagattgaacttggaaagattt 510  T
Q  135 tagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaat 234  Q
    |||||| |||||| ||||||||||||| |||||||||||||||| ||||||||  ||||||||||  | | |||||||||||  |||| |||||||||||    
T  509 tagaatgaatttttgtgagttgcacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccagttacagaatgtcttgcttatgttaaat 410  T
Q  235 gcgatctttgtcg 247  Q
    |||||||||||||    
T  409 gcgatctttgtcg 397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 119; Significance: 7e-61; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 35 - 249
Target Start/End: Complemental strand, 19745 - 19531
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    ||||||||| |||| ||| | ||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  19745 ttttgacttctgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaggattggagaatgagattgaacctggaaagattt 19646  T
Q  135 tagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaat 234  Q
    |||||| ||||||  || ||||||||| |||||||||||||||| ||||||||  |||||||||   | | |||||||||||  |||| |||||||||||    
T  19645 tagaatgaatttttatgtgttgcacctgaactcgccatggcgagcagaggctctcgcctcgcgaatgacccagttacagaatgtcttgcttatgttaaat 19546  T
Q  235 gcgatctttgtcgca 249  Q
    |||||| ||||||||    
T  19545 gcgatccttgtcgca 19531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 48092 - 48164
Alignment:
Q  24 agattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 96  Q
    ||||| |||| |||||||||||||||||| | ||||||| ||||||||| ||||| |||| || ||| |||||    
T  48092 agattttgtgattttgacttttgagatgaaccttagatgtttttgagtgtctgaagatgtatattaaagatta 48164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 115; Significance: 2e-58; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 35 - 249
Target Start/End: Complemental strand, 161164 - 160950
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    |||||||||||||| ||| | ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||    
T  161164 ttttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggagagactt 161065  T
Q  135 tagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaat 234  Q
    |||||| |||||| ||||  || |||| || ||||||||||||||||||||||   |||| |||| ||||||||||||||||  |||| ||| | |||||    
T  161064 tagaatgaatttttgtgaactgaacctgaagtcgccatggcgagtagaggctctcacctcacgaggtaactagttacagaatgtcttggttaggataaat 160965  T
Q  235 gcgatctttgtcgca 249  Q
    | |||||||||||||    
T  160964 gtgatctttgtcgca 160950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 447009 - 446965
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattagg 98  Q
    ||||||||| ||||| ||||||||| |||| ||||||||||||||    
T  447009 ctttagatgattttgggtgcctgaacatgtataataatgattagg 446965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 497940 - 497896
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattagg 98  Q
    ||||||||| ||||| ||||||||| |||| ||||||||||||||    
T  497940 ctttagatgattttgtgtgcctgaacatgtataataatgattagg 497896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 112; Significance: 1e-56; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 35 - 246
Target Start/End: Complemental strand, 13419 - 13209
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    ||||||| |||||| ||| | ||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||| | |||||||||||||||   |||    
T  13419 ttttgacctttgagttgaaccttagatgtttttgagtgcctgaacatgtctaattatgattaggaaagattggagattaagattgaacctggaatagttt 13320  T
Q  135 tagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaat 234  Q
     ||||| |||||| ||||||||||||| ||||||||||||||||||||||| |  ||||||||||||||| ||||||||||| ||||| ||| |||||||    
T  13319 aagaatgaatttttgtgagttgcacctgaactcgccatggcgagtagaggccctcgcctcgcgagctaaccagttacagaatgccttg-ttaggttaaat 13221  T
Q  235 gcgatctttgtc 246  Q
    | ||||||||||    
T  13220 gtgatctttgtc 13209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 98
Target Start/End: Original strand, 17821 - 17865
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattagg 98  Q
    ||||||||| |||||| ||||||||||||| ||||||||||||||    
T  17821 ctttagatgattttgaatgcctgaatatgtataataatgattagg 17865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 109; Significance: 6e-55; HSPs: 3)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 11 - 199
Target Start/End: Original strand, 32577 - 32765
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||||||| |||||||||  ||| ||||||||||||||  || | ||||||||||||||||| ||||| ||||||||||||||||||||| || ||||||    
T  32577 cagagagcttgcaagatttcgtgattttgacttttgagtcgaaccttagatgcttttgagtgtctgaacatgtctaataatgattaggaaggactggaga 32676  T
Q  111 atgagattgaacctggaaagattttagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgag 199  Q
    ||||||||||||||| |||||||||||||| |||||| |||||||||||| ||||||||||  ||||| ||||||||| ||||||||||    
T  32677 atgagattgaacctgtaaagattttagaatgaatttttgtgagttgcaccctaactcgccacagcgaggagaggctcccgcctcgcgag 32765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 11 - 199
Target Start/End: Complemental strand, 46428 - 46240
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||||||| |||||||||  ||| ||||||||||||||  || | ||||||||||||||||| ||||| ||||||||||||||||||||| || ||||||    
T  46428 cagagagcttgcaagatttcgtgattttgacttttgagtcgaaccttagatgcttttgagtgtctgaacatgtctaataatgattaggaaggactggaga 46329  T
Q  111 atgagattgaacctggaaagattttagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgag 199  Q
    ||||||||||||||| |||||||||||||| |||||| |||||||||||| ||||||||||  ||||| ||||||||| ||||||||||    
T  46328 atgagattgaacctgtaaagattttagaatgaatttttgtgagttgcaccctaactcgccacagcgaggagaggctcccgcctcgcgag 46240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 12 - 141
Target Start/End: Complemental strand, 16588 - 16460
Alignment:
Q  12 agagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaa 111  Q
    |||||||||||||||||    | |||||||||||||| ||| | ||||  ||||||||||||||||| |||||||||||||||||||||||| || || |    
T  16588 agagagcatgcaagatttcaagattttgacttttgagttgatccttagg-gcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagga 16490  T
Q  112 tgagattgaacctggaaagattttagaatt 141  Q
     ||||||||||||||||||||| |||||||    
T  16489 cgagattgaacctggaaagattgtagaatt 16460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 35 - 249
Target Start/End: Original strand, 28451 - 28665
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||   |||| ||    
T  28451 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctacgaagactt 28550  T
Q  135 tagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaact-agttacagaataccttgtttatgttaaa 233  Q
    |||||| || ||| ||||  || |||| |||||||||||||||| ||||||||  |||||||||| ||  |  |||||||||| ||||||||| ||||||    
T  28551 tagaatgaaattttgtgaactgaacctgaactcgccatggcgagcagaggctctcgcctcgcgag-tacttgtgttacagaatgccttgtttaggttaaa 28649  T
Q  234 tgcgatctttgtcgca 249  Q
    ||||||||||||||||    
T  28650 tgcgatctttgtcgca 28665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 35 - 249
Target Start/End: Complemental strand, 32562 - 32348
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    |||||||||||||| ||| | ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  32562 ttttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagactt 32463  T
Q  135 tagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaact-agttacagaataccttgtttatgttaaa 233  Q
    |||||| || ||| ||||  || |||| |||||||||||||||| ||||||||   ||||||||| ||  |  |||||| ||| ||||||||| ||||||    
T  32462 tagaatgaaattttgtgaactgaacctgaactcgccatggcgagcagaggctctcacctcgcgag-tacttgtgttacataatgccttgtttaggttaaa 32364  T
Q  234 tgcgatctttgtcgca 249  Q
    ||||||||||||||||    
T  32363 tgcgatctttgtcgca 32348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 107; Significance: 9e-54; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 35 - 249
Target Start/End: Complemental strand, 133132 - 132918
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    |||||||||||||| ||| | ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  133132 ttttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagactt 133033  T
Q  135 tagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactag--ttacagaataccttgtttatgttaa 232  Q
    |||||| || ||| ||||  || |||| |||||||||||||||| ||||||||  ||||||||||   ||| |  ||||| ||| ||||||||| |||||    
T  133032 tagaatgaaattttgtgaactgaacctgaactcgccatggcgagcagaggctctcgcctcgcgag--tacttgtcttacataatgccttgtttaggttaa 132935  T
Q  233 atgcgatctttgtcgca 249  Q
    ||| |||||||||||||    
T  132934 atgtgatctttgtcgca 132918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0810 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 35 - 249
Target Start/End: Complemental strand, 3411 - 3197
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    |||||||||||||| ||| | ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||   |||    
T  3411 ttttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattgagattgaacctggaatagttt 3312  T
Q  135 tagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaat 234  Q
     ||||  || ||  | |||||  |||| ||||||||||||||||||||||| |  |||||| ||  | |||||||||||||| ||||||||| |||||||    
T  3311 aagaacgaacttgtgggagttatacctgaactcgccatggcgagtagaggccctcgcctcgtgaattgactagttacagaatgccttgtttaggttaaat 3212  T
Q  235 gcgatctttgtcgca 249  Q
    |||||||||||||||    
T  3211 gcgatctttgtcgca 3197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 98; Significance: 2e-48; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 57 - 249
Target Start/End: Complemental strand, 28406436 - 28406244
Alignment:
Q  57 tagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaattaattttcgtgagttg 156  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| || ||| ||||  ||    
T  28406436 tagatgcttttgagtgcctgaacatgtctaataataattaggaaagattggagaatgagattgaacctgtaaagattttagaataaaattttgtgaactg 28406337  T
Q  157 caccttaactcgccatggcgagtagaggctcctgcctcgcgagctaact-agttacagaataccttgtttatgttaaatgcgatctttgtcgca 249  Q
     |||| |||||||||||||||||||||||||  ||||||| || ||  |  |||||| ||| ||||||||| ||||||||||||| ||||||||    
T  28406336 aacctgaactcgccatggcgagtagaggctctcgcctcgcaag-tacttgtgttacataatgccttgtttaggttaaatgcgatccttgtcgca 28406244  T

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Target: chr2; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 35 - 249
Target Start/End: Original strand, 22133859 - 22134071
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | |||| ||    
T  22133859 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctaggaagactt 22133958  T
Q  135 tagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaact-agttacagaataccttgtttatgttaaa 233  Q
    |||||| |||||| ||||  || | || |||||||||||||||| ||||||||  |||||||||  ||  |  |||||||| | ||||||||| ||||||    
T  22133959 tagaatgaatttt-gtgaactg-aactgaactcgccatggcgagcagaggctctcgcctcgcga-atacttgtgttacagactgccttgtttaggttaaa 22134055  T
Q  234 tgcgatctttgtcgca 249  Q
    ||||||||||||||||    
T  22134056 tgcgatctttgtcgca 22134071  T

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Target: chr2; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 11 - 140
Target Start/End: Complemental strand, 23660525 - 23660396
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  ||| |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || |||    
T  23660525 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 23660426  T
Q  111 atgagattgaacctggaaagattttagaat 140  Q
    ||||||||||||||||||||||||||||||    
T  23660425 atgagattgaacctggaaagattttagaat 23660396  T

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Target: chr2; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 11 - 134
Target Start/End: Original strand, 298433 - 298556
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  ||| |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| |  ||     
T  298433 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatatagg 298532  T
Q  111 atgagattgaacctggaaagattt 134  Q
    ||||||||||||||||||||||||    
T  298533 atgagattgaacctggaaagattt 298556  T

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Target: chr2; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 11 - 140
Target Start/End: Complemental strand, 27754078 - 27753949
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||| |||||||||||||  ||| |||||||||||||| ||| | |||||||||||||||||||| || |||||||||||||||||||||||| || ||     
T  27754078 cagatagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctcaacatgtctaataatgattaggaaagaatgtagg 27753979  T
Q  111 atgagattgaacctggaaagattttagaat 140  Q
    ||||||||||||||||||||||| ||||||    
T  27753978 atgagattgaacctggaaagattgtagaat 27753949  T

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Target: chr2; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 12 - 140
Target Start/End: Original strand, 22730852 - 22730980
Alignment:
Q  12 agagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaa 111  Q
    ||||||||||||| |||  ||| |||| ||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || || |    
T  22730852 agagagcatgcaatatttcgtgattttaacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagga 22730951  T
Q  112 tgagattgaacctggaaagattttagaat 140  Q
    |||||||||||||||||||||| ||||||    
T  22730952 tgagattgaacctggaaagattgtagaat 22730980  T

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Target: chr2; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 11 - 128
Target Start/End: Complemental strand, 20309597 - 20309480
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  || ||||||||||||||| ||| | ||| ||||||||||||||||| |||||||||||||||||||||||||| || ||     
T  20309597 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttatatgcttttgagtgcctggatatgtctaataatgattaggaaagaatgtagg 20309498  T
Q  111 atgagattgaacctggaa 128  Q
    ||||||||||||||||||    
T  20309497 atgagattgaacctggaa 20309480  T

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Target: chr2; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 199
Target Start/End: Complemental strand, 22337617 - 22337430
Alignment:
Q  12 agagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaa 111  Q
    |||||||||||||||||  ||| || ||||||||||| ||| | |||||||||||||||||  |||| |||||||||||||||||||||||| || || |    
T  22337617 agagagcatgcaagatttcgtgattctgacttttgagttgatccttagatgcttttgagtgtatgaacatgtctaataatgattaggaaagaatgtagga 22337518  T
Q  112 tgagattgaacctggaaagattttagaattaattttcgtgagtt-gcaccttaactcgccatggcgagtagaggctcctgcctcgcgag 199  Q
    |||||||||||||||||||| |||||||| ||  ||  ||||||   |||| || |||||| |||||||||||||||  ||||||||||    
T  22337517 tgagattgaacctggaaaga-tttagaatgaaactttttgagttctgacctgaattcgccacggcgagtagaggctctcgcctcgcgag 22337430  T

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Target: chr2; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 140
Target Start/End: Original strand, 22737799 - 22737927
Alignment:
Q  12 agagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaa 111  Q
    ||||| |||||||||||  ||| |||||||||||||| ||| | ||||||||||||||||||||||| || ||||||||||||||||||||| || || |    
T  22737799 agagatcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatatctaataatgattaggaaagaatgtagga 22737898  T
Q  112 tgagattgaacctggaaagattttagaat 140  Q
    ||||||||||||| |||||||| ||||||    
T  22737899 tgagattgaacctagaaagattgtagaat 22737927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 35 - 226
Target Start/End: Complemental strand, 25176321 - 25176130
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    ||||||| |||||| ||| | ||||||| ||||||||||||||| ||||||||| ||||||||||||| ||||||| |||||||||||||||||   |||    
T  25176321 ttttgacctttgagttgaaccttagatgtttttgagtgcctgaacatgtctaattatgattaggaaaggttggagattgagattgaacctggaatagttt 25176222  T
Q  135 tagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgttta 226  Q
     ||||   ||||| | |||||  |||| ||||||||||||||||||||||| |  ||||||||| ||    ||||||||||| |||||||||    
T  25176221 aagaacagatttttgagagttagacctgaactcgccatggcgagtagaggccctcgcctcgcgaactgcgcagttacagaatgccttgttta 25176130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 118
Target Start/End: Original strand, 28291920 - 28292027
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  || ||||||||||||||| ||| | ||||||||||||||||||||||| |||||||| ||||||||||||||| || |||    
T  28291920 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaagaatgattaggaaagaatgtaga 28292019  T
Q  111 atgagatt 118  Q
    ||||||||    
T  28292020 atgagatt 28292027  T

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Target: chr2; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 14 - 199
Target Start/End: Complemental strand, 23076940 - 23076756
Alignment:
Q  14 agagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatg 113  Q
    |||||||||||||||  ||| |||||||| || || ||| | ||||||||||||||||||||||| |||||||||||| ||||||||||| || || |||    
T  23076940 agagcatgcaagatttcgtgattttgactattaagttgatccttagatgcttttgagtgcctgaacatgtctaataataattaggaaagaatgtaggatg 23076841  T
Q  114 agattgaacctggaaagattttagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgag 199  Q
    |||||| ||||||||||| |||||||| ||  || |  | |   |||| ||||||||| |||||||||||||||  ||||||||||    
T  23076840 agattggacctggaaaga-tttagaatgaaactttggaattctgacctgaactcgccacggcgagtagaggctctcgcctcgcgag 23076756  T

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Target: chr2; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 23654028 - 23654145
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||   |  |||||||||||||| ||| | |||||||||||||| |||||||| |||||||||||||||||||||||| || ||     
T  23654028 cagagagcatgcaagatttcataattttgacttttgagttgaaccttagatgcttttgactgcctgaacatgtctaataatgattaggaaagaatgtagg 23654127  T
Q  111 atgagattgaacctggaa 128  Q
    ||||||||||||||||||    
T  23654128 atgagattgaacctggaa 23654145  T

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Target: chr2; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 12 - 128
Target Start/End: Complemental strand, 23286352 - 23286236
Alignment:
Q  12 agagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaa 111  Q
    |||||||||||||||||  ||  |||||||||||||| ||| | ||||||||||||||||| ||||| |||||||||||||||||||||||| || || |    
T  23286352 agagagcatgcaagatttcgtaattttgacttttgagttgaaccttagatgcttttgagtgtctgaacatgtctaataatgattaggaaagaatgtagga 23286253  T
Q  112 tgagattgaacctggaa 128  Q
    ||||||||||| |||||    
T  23286252 tgagattgaacatggaa 23286236  T

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Target: chr2; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 35 - 140
Target Start/End: Original strand, 32451571 - 32451676
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| |||| ||||||||||||||| ||| || || |||||||||||| ||||||||||     
T  32451571 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacatggaaagattg 32451670  T
Q  135 tagaat 140  Q
    ||||||    
T  32451671 tagaat 32451676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 56 - 131
Target Start/End: Original strand, 23071626 - 23071701
Alignment:
Q  56 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaaga 131  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| || |||||||||||||||||| |||||    
T  23071626 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga 23071701  T

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Target: chr2; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 37745 - 37862
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||| ||||||||| |||  || |||||||||||||||  || | ||||||||||||||||||||||| ||||||||||||||||||||||   || ||     
T  37745 cagaaagcatgcaaaatttcgtatttttgacttttgagtggaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaagatgtagg 37844  T
Q  111 atgagattgaacctggaa 128  Q
    ||||||||||||||||||    
T  37845 atgagattgaacctggaa 37862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 35 - 216
Target Start/End: Original strand, 23708261 - 23708441
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    |||||||  ||||| ||| ||||||||| ||||||||| ||||| || | || ||||||||||||||| | | ||| |||||||||| | ||||   |||    
T  23708261 ttttgacccttgagttgatctttagatgtttttgagtgtctgaacatatgtattaatgattaggaaagttcgtagattgagattgaatc-ggaatagttt 23708359  T
Q  135 tagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaat 216  Q
     |||||  ||||| | ||||| ||||| |||||||||| ||||||||||||||  |||| ||||| || | |||||||||||    
T  23708360 aagaatggatttttgggagttacacctgaactcgccatagcgagtagaggctctcgccttgcgagttacccagttacagaat 23708441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 102
Target Start/End: Original strand, 39827600 - 39827648
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaag 102  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  39827600 ctttagatgattttgagtgcctgaatatgtataataatgattaggaaag 39827648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 96
Target Start/End: Complemental strand, 24658125 - 24658055
Alignment:
Q  26 attctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 96  Q
    ||||||| ||||||||||||||| ||| | |||||||||||||||||||| || |||| || |||||||||    
T  24658125 attctgtatttttgacttttgagttgaaccttagatgcttttgagtgcctaaagatgtttattaatgatta 24658055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 124
Target Start/End: Complemental strand, 23207814 - 23207744
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacct 124  Q
    ||||||||| || |||||||||||| |||| |||||||||||||| ||| ||  ||| |||||||||||||    
T  23207814 ctttagatgattatgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacct 23207744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 22740579 - 22740664
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 96  Q
    ||||||||||| |||||| |||  ||| |||||||||| ||| | ||||||| ||||||||||||||| |||| || ||| |||||    
T  22740579 cagagagcatgtaagattatgtagtttggacttttgagttgaaccttagatgtttttgagtgcctgaagatgtatattaaagatta 22740664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 22758334 - 22758419
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 96  Q
    ||||||||||| |||||| |||  ||| |||||||||| ||| | ||||||| ||||||||||||||| |||| || ||| |||||    
T  22758334 cagagagcatgtaagattatgtagtttggacttttgagttgaaccttagatgtttttgagtgcctgaagatgtatattaaagatta 22758419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 98
Target Start/End: Original strand, 18546549 - 18546593
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattagg 98  Q
    ||||||||| |||||||||||||||||||| ||| ||||||||||    
T  18546549 ctttagatgattttgagtgcctgaatatgtataagaatgattagg 18546593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 226
Target Start/End: Original strand, 20519964 - 20520024
Alignment:
Q  166 tcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgttta 226  Q
    ||||||| ||| ||||||||||  |||||||||| |  |||||||||||||||||||||||    
T  20519964 tcgccatagcgtgtagaggctctcgcctcgcgagttgcctagttacagaataccttgttta 20520024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 126
Target Start/End: Original strand, 22412720 - 22412792
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctgg 126  Q
    ||||||||| || |||||||||||| |||| | |||||||||||| ||| ||  ||| |||||||||||||||    
T  22412720 ctttagatgattctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgg 22412792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 202
Target Start/End: Complemental strand, 31756269 - 31756229
Alignment:
Q  162 taactcgccatggcgagtagaggctcctgcctcgcgagcta 202  Q
    ||||||||||||||||||||||||||  |||||||||||||    
T  31756269 taactcgccatggcgagtagaggctctcgcctcgcgagcta 31756229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 97
Target Start/End: Original strand, 25963351 - 25963422
Alignment:
Q  26 attctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 97  Q
    |||||||  |||||||||||||| ||| | |||||||||||||||||||| || |||| || ||| ||||||    
T  25963351 attctgtaattttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttattaaagattag 25963422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 19672360 - 19672290
Alignment:
Q  56 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctgg 126  Q
    ||||||| |||||||||  ||||||||| |||||||||||||| ||| ||  ||| |||| ||||||||||    
T  19672360 ttagatgattttgagtgtttgaatatgtataataatgattaggcaagtttttagattgagcttgaacctgg 19672290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 249
Target Start/End: Complemental strand, 23207630 - 23207545
Alignment:
Q  163 aactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaatgcgatctttgtcgca 249  Q
    |||||||||| ||||||||||||||  |||| ||||| |  | |||||||||| |||||| ||| |||||||| || ||||||||||    
T  23207630 aactcgccatagcgagtagaggctctcgccttgcgagttgcccagttacagaacaccttg-ttaggttaaatgtgacctttgtcgca 23207545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 128
Target Start/End: Complemental strand, 27263711 - 27263610
Alignment:
Q  27 ttctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta-ggaaagattggagaatgagattgaacctg 125  Q
    ||||| |||||||||||||||| ||| | |||||||||||||||| |||  |  |||||| || |||||| |||| ||||  |||| |||||||||||||    
T  27263711 ttctgagtttttgacttttgagttgaaccttagatgcttttgagtacctttaggtgtctactattgattagggaatgatt-tagaacgagattgaacctg 27263613  T
Q  126 gaa 128  Q
    |||    
T  27263612 gaa 27263610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 45677789 - 45677838
Alignment:
Q  26 attctgtgtttttgacttttgagatgacctttagatgcttttgagtgcct 75  Q
    ||||||| ||||||||||||||| ||| | ||||||| ||||||||||||    
T  45677789 attctgtatttttgacttttgagttgaaccttagatgtttttgagtgcct 45677838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 122
Target Start/End: Original strand, 20519777 - 20519845
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaac 122  Q
    ||||||||| |  |||||||||||| |||| |||||||||||||| ||| ||  ||| |||||||||||    
T  20519777 ctttagatgatcctgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaac 20519845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 199
Target Start/End: Original strand, 22459330 - 22459366
Alignment:
Q  163 aactcgccatggcgagtagaggctcctgcctcgcgag 199  Q
    |||||||||| |||||||||||||| |||||||||||    
T  22459330 aactcgccatagcgagtagaggctcttgcctcgcgag 22459366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 122
Target Start/End: Complemental strand, 23005265 - 23005197
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaac 122  Q
    ||||||||| ||||||||||||||| |||| ||| |||||||||| ||| ||   || |||||||||||    
T  23005265 ctttagatgtttttgagtgcctgaacatgtataagaatgattaggcaagttttttgattgagattgaac 23005197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 41684530 - 41684570
Alignment:
Q  162 taactcgccatggcgagtagaggctcctgcctcgcgagcta 202  Q
    ||||||||| ||||||||||||||||  |||||||||||||    
T  41684530 taactcgccgtggcgagtagaggctctcgcctcgcgagcta 41684570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 202
Target Start/End: Complemental strand, 44621279 - 44621239
Alignment:
Q  162 taactcgccatggcgagtagaggctcctgcctcgcgagcta 202  Q
    ||||||||| ||||||||||||||||  |||||||||||||    
T  44621279 taactcgccgtggcgagtagaggctctcgcctcgcgagcta 44621239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 97; Significance: 9e-48; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 35 - 199
Target Start/End: Original strand, 2445 - 2608
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    |||||||||||| ||||| | |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  2445 ttttgacttttgggatgatccttagatgcttttgagtacctgaacatgtctaataatgattaggaaagattggagaatgagtttgaacctgtaaagattt 2544  T
Q  135 tagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgag 199  Q
    |||||| || ||| ||||  || |||| |||||||||||||||||||||||||  ||||||||||    
T  2545 tagaatgaaattt-gtgaactgaacctgaactcgccatggcgagtagaggctctcgcctcgcgag 2608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 95; Significance: 1e-46; HSPs: 4)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 35 - 249
Target Start/End: Complemental strand, 130386 - 130172
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    |||||||||||||| ||| | || |||| ||||||||||||||| ||||||| | |||||||| |||||||  ||| |||||||||||||||||   |||    
T  130386 ttttgacttttgagttgatcctttgatgtttttgagtgcctgaacatgtctagttatgattagaaaagattctagattgagattgaacctggaatagttt 130287  T
Q  135 tagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaat 234  Q
     |||||  ||||| | || || ||||| |||||||||||||||| ||||||||  ||||||||||||||||||||||| ||| ||||||||| | |||||    
T  130286 aagaatggatttttgggaattacacctaaactcgccatggcgagcagaggctctcgcctcgcgagctaactagttacaaaatgccttgtttaggataaat 130187  T
Q  235 gcgatctttgtcgca 249  Q
    |||||||||||||||    
T  130186 gcgatctttgtcgca 130172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 122
Target Start/End: Original strand, 60299 - 60367
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaac 122  Q
    ||||||||| || |||||||||||| |||| |||||||||||||| ||| ||  ||| |||||||||||    
T  60299 ctttagatgattctgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaac 60367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 226
Target Start/End: Original strand, 60483 - 60546
Alignment:
Q  163 aactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgttta 226  Q
    |||||||||| ||||||||||||||  |||||||||| |  | ||||||||||||| |||||||    
T  60483 aactcgccatagcgagtagaggctctcgcctcgcgagtttcccagttacagaatacattgttta 60546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 128
Target Start/End: Complemental strand, 23692 - 23575
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag-gaaagattggag 109  Q
    |||||||||||  |  ||||| |||||||||||||||| ||| | |||||||| ||||||| |||  |  |||||| || ||||||| ||| ||||  ||    
T  23692 cagagagcatgtcattttctgagtttttgacttttgagttgaaccttagatgcctttgagtacctttaggtgtctactactgattagagaatgatt-tag 23594  T
Q  110 aatgagattgaacctggaa 128  Q
    |||||||||||||||||||    
T  23593 aatgagattgaacctggaa 23575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 11 - 140
Target Start/End: Original strand, 18576 - 18705
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||||||||||||||||| |||| |||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||     
T  18576 cagagagcatgcaagattttgtgattttgacttttgagatgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 18675  T
Q  111 atgagattgaacctggaaagattttagaat 140  Q
    ||||||||||||||||||||||| ||||||    
T  18676 atgagattgaacctggaaagattgtagaat 18705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 11 - 140
Target Start/End: Original strand, 1696 - 1824
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||||||| |||||||||||||| |||||||||||||| ||| | ||||||| ||||||||||||||| |||||||||||||||||||||||| || |||    
T  1696 cagagagcttgcaagattctgtgattttgacttttgagttgatccttagatg-ttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 1794  T
Q  111 atgagattgaacctggaaagattttagaat 140  Q
    ||||||||||||||||||||||||||||||    
T  1795 atgagattgaacctggaaagattttagaat 1824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 90; Significance: 1e-43; HSPs: 4)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 36 - 161
Target Start/End: Complemental strand, 63039 - 62914
Alignment:
Q  36 tttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagatttt 135  Q
    ||||||||||||| ||| | ||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  63039 tttgacttttgagttgatccttagatgtttttgagtgcatgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaatatttt 62940  T
Q  136 agaattaattttcgtgagttgcacct 161  Q
    ||||| |||||| |||||||||||||    
T  62939 agaatgaatttttgtgagttgcacct 62914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 11 - 140
Target Start/End: Complemental strand, 125085 - 124959
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  ||| |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||     
T  125085 cagagagcatgcaagatttggtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 124986  T
Q  111 atgagattgaacctggaaagattttagaat 140  Q
    |||||   ||||||||||||||| ||||||    
T  124985 atgag---gaacctggaaagattgtagaat 124959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 175267 - 175202
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctg 76  Q
    ||||||||||||||||||  ||  |||||||||||||| ||| | ||||||| |||||||||||||    
T  175267 cagagagcatgcaagatttcgtaattttgacttttgagttgaaccttagatgtttttgagtgcctg 175202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 133739 - 133779
Alignment:
Q  162 taactcgccatggcgagtagaggctcctgcctcgcgagcta 202  Q
    ||||||||| ||||||||||||||||  |||||||||||||    
T  133739 taactcgccgtggcgagtagaggctctcgcctcgcgagcta 133779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1137 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold1137
Description:

Target: scaffold1137; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 34 - 249
Target Start/End: Original strand, 1942 - 2157
Alignment:
Q  34 tttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagatt 133  Q
    ||||||||||||||| ||| | ||||||| ||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||| |  ||||| |    
T  1942 tttttgacttttgagttgatccttagatgtttttgagtcactgaacatgtctaataatgattaggaaagattggagaatgagattgaacataaaaagact 2041  T
Q  134 ttagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaact-agttacagaataccttgtttatgttaa 232  Q
    ||||||| || ||| ||||  || |||| ||||||||||||| || ||||||||  |||||||||| ||  |  |||||||||| ||||||||| |||||    
T  2042 ttagaatgaaattttgtgaactgaacctgaactcgccatggcaagcagaggctctcgcctcgcgag-tacttgtgttacagaatgccttgtttaggttaa 2140  T
Q  233 atgcgatctttgtcgca 249  Q
    |||||||| ||||||||    
T  2141 atgcgatccttgtcgca 2157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 35 - 249
Target Start/End: Original strand, 2286 - 2499
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    |||||||||||||| ||| | ||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| |  | ||    
T  2286 ttttgacttttgagttgatccttaaatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattgagattgaacctgg-attagtt 2384  T
Q  135 tagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaat 234  Q
     ||||   | ||  | |||||  |||| |||||||||||||||||||||||   ||||||||||  | |||||||||||||| ||||||||| | |||||    
T  2385 aagaacgtacttgtgggagttatacctgaactcgccatggcgagtagaggccattgcctcgcgaattgactagttacagaatgccttgtttaggataaat 2484  T
Q  235 gcgatctttgtcgca 249  Q
    |||||||||||||||    
T  2485 gcgatctttgtcgca 2499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 87; Significance: 8e-42; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 12 - 249
Target Start/End: Original strand, 7913 - 8149
Alignment:
Q  12 agagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaa 111  Q
    ||||||||||||||||| |||| |||||||||||||| ||| | |||||||| |||||||||||||| |||||||||| ||||||||||||| || || |    
T  7913 agagagcatgcaagattttgtgattttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtagga 8012  T
Q  112 tgagattgaacctggaaagattttagaat-taattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaacta--gt 208  Q
    ||||||||||||||||||||  |||||||  || ||| | ||  |  | |  |||||||||||||||| ||||||||  |||||||||||  ||||  ||    
T  8013 tgagattgaacctggaaaga-cttagaatgaaactttggaga-atctaacagaactcgccatggcgagcagaggctctcgcctcgcgagc--actagtgt 8108  T
Q  209 tacagaataccttgtttatgttaaatgcgatctttgtcgca 249  Q
    |||||||| ||||||||| ||||||||||||||||||||||    
T  8109 tacagaatgccttgtttaggttaaatgcgatctttgtcgca 8149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 126
Target Start/End: Original strand, 53103 - 53204
Alignment:
Q  25 gattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacct 124  Q
    |||| ||| ||||||||  || || ||| ||||||||| ||||||||||||||| | || |||||||||||||| ||| ||  ||| |||||||||||||    
T  53103 gattttgtatttttgacccttaagttgaactttagatgattttgagtgcctgaacaagtataataatgattaggcaagtttttagattgagattgaacct 53202  T
Q  125 gg 126  Q
    ||    
T  53203 gg 53204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 35 - 249
Target Start/End: Original strand, 15472 - 15686
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    |||| |||||| || ||| | ||||||| |||||||||||| || |||| |||| ||||||||||||||||  ||| |||||||||||||||||   |||    
T  15472 ttttaacttttaagttgaaccttagatgtttttgagtgcctaaacatgtataatgatgattaggaaagattatagattgagattgaacctggaatagttt 15571  T
Q  135 tagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaat 234  Q
     |||||  |||||   || || ||| | ||||||||||||||||||||||| |  ||||||||||||||| ||||||||||| |||||||||||||||||    
T  15572 aagaatggatttttcggaattacacatgaactcgccatggcgagtagaggccctcgcctcgcgagctaaccagttacagaatgccttgtttatgttaaat 15671  T
Q  235 gcgatctttgtcgca 249  Q
    | |||||||||||||    
T  15672 gtgatctttgtcgca 15686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 56 - 249
Target Start/End: Complemental strand, 10986 - 10794
Alignment:
Q  56 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaattaattttcgtgagtt 155  Q
    ||||||| ||||||||||||||| |||| ||||||||||||||||||||   ||| |||||||||||||||||   ||| ||||| |||||| |||||||    
T  10986 ttagatgtttttgagtgcctgaacatgtgtaataatgattaggaaagatcctagactgagattgaacctggaatagtttaagaatgaatttttgtgagtt 10887  T
Q  156 gcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaatgcgatctttgtcgca 249  Q
     ||||| |||||||||| ||||||||||||||  |||||||||| || |||||| || ||| ||||| ||| |||||||||||||| |||||||    
T  10886 acacctgaactcgccatagcgagtagaggctctcgcctcgcgagttacctagttccaaaatgccttg-ttaggttaaatgcgatctctgtcgca 10794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 86; Significance: 3e-41; HSPs: 4)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 11 - 140
Target Start/End: Complemental strand, 40359 - 40230
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  ||| |||||||||||||| ||| |  |||||||||||||||||||||| |||||||||||||||||||||||| |||||     
T  40359 cagagagcatgcaagatttcgtgattttgacttttgagttgatccgtagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatggagg 40260  T
Q  111 atgagattgaacctggaaagattttagaat 140  Q
    ||||||||||||||||||||||| ||||||    
T  40259 atgagattgaacctggaaagattgtagaat 40230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 11 - 140
Target Start/End: Original strand, 39549 - 39678
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||||||||||| |||||   || |||||||||||||| ||| | |||||||||||||||| |||||| ||||||| |||||||||||||||| || |||    
T  39549 cagagagcatgccagatttcatgattttgacttttgagttgatccttagatgcttttgagtacctgaacatgtctattaatgattaggaaagaatgtaga 39648  T
Q  111 atgagattgaacctggaaagattttagaat 140  Q
    ||||||||||||||||||||| | ||||||    
T  39649 atgagattgaacctggaaagaatgtagaat 39678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 69 - 131
Target Start/End: Original strand, 59179 - 59241
Alignment:
Q  69 agtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaaga 131  Q
    |||||||||| |||||||||||||||||||| ||| || |||||||||||||||||| |||||    
T  59179 agtgcctgaacatgtctaataatgattaggacagaatgtagaatgagattgaacctgaaaaga 59241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 140
Target Start/End: Complemental strand, 26659 - 26599
Alignment:
Q  80 atgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaat 140  Q
    |||||||||||||||||||||||| || || |||||||| |||||||||||||| ||||||    
T  26659 atgtctaataatgattaggaaagaatgtaggatgagattaaacctggaaagattgtagaat 26599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 86; Significance: 3e-41; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 11 - 140
Target Start/End: Complemental strand, 52415 - 52286
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||||||||||||||||| | || |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||     
T  52415 cagagagcatgcaagattttttgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 52316  T
Q  111 atgagattgaacctggaaagattttagaat 140  Q
    ||||||||||||||||||||||| ||||||    
T  52315 atgagattgaacctggaaagattgtagaat 52286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 167608 - 167721
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  ||  |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| |  ||     
T  167608 cagagagcatgcaagatttcgtaattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttagg 167707  T
Q  111 atgagattgaacct 124  Q
    ||||||||||||||    
T  167708 atgagattgaacct 167721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 102
Target Start/End: Original strand, 37738 - 37786
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaag 102  Q
    ||||||||| ||||||||||| |||||||| ||| ||||||||||||||    
T  37738 ctttagatgattttgagtgccagaatatgtataagaatgattaggaaag 37786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 85; Significance: 1e-40; HSPs: 2)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 11 - 199
Target Start/End: Original strand, 15233 - 15421
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||||||||||||||||   ||| |||||||||||||| ||| | |||||||||||||||||||||||||||| ||||||||||||||||||| || |||    
T  15233 cagagagcatgcaagatatcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaatatgtttaataatgattaggaaagaatgtaga 15332  T
Q  111 atgagattgaacctggaaagattttagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgag 199  Q
    ||||||||||| ||||| |||||||||||| ||  || | || |   |||| |||||||||| ||||| ||||||||  ||||||||||    
T  15333 atgagattgaatctggatagattttagaatgaaactttgggaatctgacctgaactcgccatagcgagcagaggctctcgcctcgcgag 15421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 13133 - 13033
Alignment:
Q  25 gattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacct 124  Q
    |||| |||| |||||||  || || ||| ||||||||| ||||||||||||||  |||| || ||||||||||| ||| ||  ||| |||||||||||||    
T  13133 gattttgtggttttgacccttaagttgaactttagatgattttgagtgcctgaccatgtatattaatgattaggcaagtttttagattgagattgaacct 13034  T
Q  125 g 125  Q
    |    
T  13033 g 13033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 85; Significance: 1e-40; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 35 - 195
Target Start/End: Complemental strand, 101873 - 101714
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    |||| ||||||||| ||| | ||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||    
T  101873 tttttacttttgagttgatccttagaagtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggagagactt 101774  T
Q  135 tagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcg 195  Q
    |||||| |||||| ||||  |  |||| |||||||||||||||| |||||||| |||||||    
T  101773 tagaatgaatttt-gtgaacttgacctgaactcgccatggcgagcagaggctcttgcctcg 101714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 84 - 245
Target Start/End: Original strand, 39863 - 40024
Alignment:
Q  84 ctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaattaattttcgtgagttgcaccttaactcgccatggcgagtagag 183  Q
    ||||||||| ||||||||||||||||| ||| ||| |||||||||   ||| ||||  || ||  | |||||  |||| |||| |||||||| |||||||    
T  39863 ctaataatggttaggaaagattggagattgacattcaacctggaatagtttaagaacgaacttgtgggagttatacctgaacttgccatggcaagtagag 39962  T
Q  184 gctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaatgcgatctttgt 245  Q
    ||||  ||||||||||||||||||||||| ||| |||| |||| ||||||||||||||||||    
T  39963 gctctcgcctcgcgagctaactagttacaaaatgccttatttaggttaaatgcgatctttgt 40024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 35 - 218
Target Start/End: Complemental strand, 17259 - 17076
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| |||| ||||||||||||||||||| || |||||||||||||||||||| ||||||    
T  17259 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctggatagattt 17160  T
Q  135 tagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaatac 218  Q
    |||||| ||  || | || |   |||| |||||||||||||||| ||||||||  ||||||||||  | ||| |||||||||||    
T  17159 tagaataaaactttgagaatatgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacctatttacagaatac 17076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 84; Significance: 5e-40; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 11 - 134
Target Start/End: Original strand, 16833 - 16956
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||   ||||||||||||| ||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || |||    
T  16833 cagagagcatgcaagatttcttgtttttgactttcgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 16932  T
Q  111 atgagattgaacctggaaagattt 134  Q
    ||||||||||||||||||||||||    
T  16933 atgagattgaacctggaaagattt 16956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 127
Target Start/End: Original strand, 78980 - 79096
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||||||||||||||||| |||  || ||||||||||| ||| | |||||||||||||||||| |||| |||| |||||||||||||||| || || |||    
T  78980 cagagagcatgcaagattttgtaattctgacttttgagttgaaccttagatgcttttgagtgcatgaacatgtttaataatgattaggaaggaatgtaga 79079  T
Q  111 atgagattgaacctgga 127  Q
    |||||||||||||||||    
T  79080 atgagattgaacctgga 79096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 11 - 133
Target Start/End: Original strand, 5739 - 5861
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  |||||||| ||||||||| ||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||     
T  5739 cagagagcatgcaagatttcgtgttttttacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattgtagg 5838  T
Q  111 atgagattgaacctggaaagatt 133  Q
    |||||||||||||||| ||||||    
T  5839 atgagattgaacctgggaagatt 5861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0639 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 11 - 133
Target Start/End: Complemental strand, 8978 - 8856
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||||||||||||||||| |||| |||||||||||||| ||| | |||||||||||||||||||||||||||||||||| ||||||||||||| || ||     
T  8978 cagagagcatgcaagattttgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaatatgtctaatagtgattaggaaagaatgtagg 8879  T
Q  111 atgagattgaacctggaaagatt 133  Q
    |||||||||||||| ||||||||    
T  8878 atgagattgaacctagaaagatt 8856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 11 - 140
Target Start/End: Complemental strand, 20906 - 20777
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||| ||||||  ||| |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||     
T  20906 cagagagcatgtaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 20807  T
Q  111 atgagattgaacctggaaagattttagaat 140  Q
    ||||||||||||||||||||||| ||||||    
T  20806 atgagattgaacctggaaagattatagaat 20777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 82; Significance: 8e-39; HSPs: 2)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 11 - 140
Target Start/End: Complemental strand, 3973 - 3844
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  ||| |||||||||||||| ||| ||||||||||||||||||| ||||| |||||||||||||||||||||||| || ||     
T  3973 cagagagcatgcaagatttcgtgattttgacttttgagttgatctttagatgcttttgagtgtctgaacatgtctaataatgattaggaaagaatgtagg 3874  T
Q  111 atgagattgaacctggaaagattttagaat 140  Q
    |||||||||||||||||| |||| ||||||    
T  3873 atgagattgaacctggaatgattgtagaat 3844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 35 - 140
Target Start/End: Complemental strand, 821 - 716
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||| ||||| || ||||||||||||||||| |||||| ||    
T  821 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacctagaaagaatt 722  T
Q  135 tagaat 140  Q
    ||||||    
T  721 tagaat 716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 82; Significance: 8e-39; HSPs: 3)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 12 - 186
Target Start/End: Complemental strand, 2353 - 2178
Alignment:
Q  12 agagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaa 111  Q
    ||||||||| |||||||  ||| |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || || |    
T  2353 agagagcatccaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagga 2254  T
Q  112 tgagattgaacctggaaagattttagaattaattttcgtgagttgc--accttaactcgccatggcgagtagaggct 186  Q
    |||||||||||||||||||||| |||||| ||  || ||| | | |  |||| ||||||||||||||||||||||||    
T  2253 tgagattgaacctggaaagattgtagaatgaaactt-gtgggattctgacctgaactcgccatggcgagtagaggct 2178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 33 - 249
Target Start/End: Original strand, 207159 - 207374
Alignment:
Q  33 gtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagat 132  Q
    |||||||||||||||| ||| | |||||||| |||||||||||||| |||||||||| ||||||||| ||| || || |||||||||||||||||||||     
T  207159 gtttttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggagagaatgtaggatgagattgaacctggaaaga- 207257  T
Q  133 tttagaat-taattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactag--ttacagaataccttgtttatgt 229  Q
     |||||||  || ||| | || |   | || |||||||||||||||| ||||||||  |||||||||||  |||||  ||||| ||| | ||||||| ||    
T  207258 cttagaatgaaactttggagaatctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgagc--actagtattacacaatgctttgtttaggt 207354  T
Q  230 taaatgcgatctttgtcgca 249  Q
    ||||||||||||||||||||    
T  207355 taaatgcgatctttgtcgca 207374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 56 - 122
Target Start/End: Original strand, 119214 - 119280
Alignment:
Q  56 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaac 122  Q
    ||||||| |||||||||||||||||||| |||||||||||||  ||| ||  ||| |||||||||||    
T  119214 ttagatgattttgagtgcctgaatatgtataataatgattagacaagtttttagattgagattgaac 119280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 81; Significance: 3e-38; HSPs: 4)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 16161 - 16041
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||||||||||||||||| |||  |||||||||| ||| ||| | |||||||||||||||||||||||||||||||||||||||||||||||| || |||    
T  16161 cagagagcatgcaagattttgtaattttgactttagagttgatccttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagaatgtaga 16062  T
Q  111 atgagattgaacctggaaaga 131  Q
    ||||||||||||||| |||||    
T  16061 atgagattgaacctgaaaaga 16041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 96
Target Start/End: Complemental strand, 1845 - 1755
Alignment:
Q  6 aggaacagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 96  Q
    |||| ||||||||||| ||||||  ||  |||||||||||||| ||| | ||||||| ||||||||||||||| |||| || ||| |||||    
T  1845 aggaccagagagcatgtaagatttcgtaattttgacttttgagttgaaccttagatgtttttgagtgcctgaagatgtttattaaagatta 1755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 126
Target Start/End: Original strand, 17937 - 17999
Alignment:
Q  64 ttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctgg 126  Q
    |||||||||| ||||||||| |||||||||||||| ||| ||  ||| |||||||| ||||||    
T  17937 ttttgagtgcatgaatatgtataataatgattaggcaagtttttagattgagattggacctgg 17999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 247
Target Start/End: Complemental strand, 16010 - 15927
Alignment:
Q  163 aactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaatgcgatctttgtcg 247  Q
    |||||||||||||||| ||||||||  ||||||||||||     |||||||||| |||| |||| ||  ||||||||||||||||    
T  16010 aactcgccatggcgagcagaggctctcgcctcgcgagcttttgtgttacagaatgcctt-tttaggtggaatgcgatctttgtcg 15927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 81; Significance: 3e-38; HSPs: 4)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 12 - 187
Target Start/End: Complemental strand, 5010 - 4834
Alignment:
Q  12 agagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaa 111  Q
    ||||||| |||||||||  ||| |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||| ||||| || ||||    
T  5010 agagagcttgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaa 4911  T
Q  112 tgagattgaacctggaaaga-ttttagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctc 187  Q
    |||||||||||||||||||| ||||||||| ||  || | || |   |||| |||||||||||||||| ||||||||    
T  4910 tgagattgaacctggaaagatttttagaatgaaactttgggaatctgacctgaactcgccatggcgagcagaggctc 4834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 12 - 187
Target Start/End: Complemental strand, 12592 - 12416
Alignment:
Q  12 agagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaa 111  Q
    ||||||| |||||||||  ||| |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||| ||||| || ||||    
T  12592 agagagcttgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaa 12493  T
Q  112 tgagattgaacctggaaaga-ttttagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctc 187  Q
    |||||||||||||||||||| ||||||||| ||  || | || |   |||| |||||||||||||||| ||||||||    
T  12492 tgagattgaacctggaaagatttttagaatgaaactttgggaatctgacctgaactcgccatggcgagcagaggctc 12416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 12 - 187
Target Start/End: Complemental strand, 22544 - 22368
Alignment:
Q  12 agagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaa 111  Q
    ||||||| |||||||||  ||| |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||| ||||| || ||||    
T  22544 agagagcttgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaa 22445  T
Q  112 tgagattgaacctggaaaga-ttttagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctc 187  Q
    |||||||||||||||||||| ||||||||| ||  || | || |   |||| |||||||||||||||| ||||||||    
T  22444 tgagattgaacctggaaagatttttagaatgaaactttgggaatctgacctgaactcgccatggcgagcagaggctc 22368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 18262 - 18326
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcct 75  Q
    |||||||||||  | |||||| |||||||||||||||| ||| | ||||||| ||||||||||||    
T  18262 cagagagcatgtcaaattctgagtttttgacttttgagttgaaccttagatgtttttgagtgcct 18326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 81; Significance: 3e-38; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 34623 - 34503
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  || ||||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || |||    
T  34623 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 34524  T
Q  111 atgagattgaacctggaaaga 131  Q
    ||||||||||||||| |||||    
T  34523 atgagattgaacctgaaaaga 34503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 140
Target Start/End: Complemental strand, 13594 - 13466
Alignment:
Q  12 agagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaa 111  Q
    |||||||||||||||||  ||| |||||||||||||| ||| | ||||||||||||||||||||||| ||||||||| |||||||||||||| || || |    
T  13594 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaattatgattaggaaagaatgtagga 13495  T
Q  112 tgagattgaacctggaaagattttagaat 140  Q
    |||||||||| ||| ||||||| ||||||    
T  13494 tgagattgaatctgaaaagattgtagaat 13466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 80; Significance: 1e-37; HSPs: 2)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 11 - 126
Target Start/End: Original strand, 580 - 695
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  ||| |||||||||||||| ||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||    
T  580 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattgtaga 679  T
Q  111 atgagattgaacctgg 126  Q
    | ||||||||||||||    
T  680 acgagattgaacctgg 695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 8110 - 8227
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||||||| |||||||||  ||| |||||| || |||| | | | || |||| || |||| ||||||| ||||  ||||||||||||| ||| ||  |||    
T  8110 cagagagcttgcaagatttcgtgattttgagttgtgagtttaaccttggatgtttatgagggcctgaacatgtacaataatgattaggcaaggttttaga 8209  T
Q  111 atgagattgaacctggaa 128  Q
    |||||||||||| |||||    
T  8210 atgagattgaacttggaa 8227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 80; Significance: 1e-37; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 12 - 199
Target Start/End: Original strand, 25684 - 25871
Alignment:
Q  12 agagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaa 111  Q
    ||||||| |||||||||   ||||||||||||||||| ||| | ||||||| ||||||||||||||| |||||||||||||||||||||||| || || |    
T  25684 agagagcttgcaagatttcatgtttttgacttttgagttgatccttagatggttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagga 25783  T
Q  112 tgagattgaacctggaaagattttagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgag 199  Q
    |||||||||||||| ||||||| |||||| |||||| |  | |   |||| ||||||||| |||||| ||||||||  ||||||||||    
T  25784 tgagattgaacctgaaaagattgtagaatgaatttttggaaatctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 25871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 11 - 140
Target Start/End: Original strand, 33112 - 33241
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||||||| |||||||||  ||| |||| ||||||||| ||| | |||||||||| |||||||||| | |||||||||||||||||||||||| || ||     
T  33112 cagagagcttgcaagatttcgtgattttcacttttgagttgatccttagatgcttctgagtgcctggacatgtctaataatgattaggaaagaatgtagg 33211  T
Q  111 atgagattgaacctggaaagattttagaat 140  Q
    ||||||||||||||||||||||||||||||    
T  33212 atgagattgaacctggaaagattttagaat 33241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 11 - 134
Target Start/End: Complemental strand, 20615 - 20492
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  ||| ||||||||| |||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || |||    
T  20615 cagagagcatgcaagatttcgtgattttgacttctgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 20516  T
Q  111 atgagattgaacctggaaagattt 134  Q
    || |||||||||||||||||||||    
T  20515 ataagattgaacctggaaagattt 20492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 80; Significance: 1e-37; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 54 - 249
Target Start/End: Complemental strand, 32996 - 32802
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaattaattttcgtgag 153  Q
    ||||||||| || |||||||||||| |||| |||||||||||||||||||||  ||| ||||||||||| |||||   | | |||||  ||||| | |||    
T  32996 ctttagatgattctgagtgcctgaacatgtgtaataatgattaggaaagattctagattgagattgaacttggaatagtctaagaatggatttttgggag 32897  T
Q  154 ttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaatgcgatctttgtcgca 249  Q
    || ||||| ||||||||||||||||||||||| |  ||||||||||||| | ||||||||||| ||||| ||  ||||||||||||||||||||||    
T  32896 ttacacctgaactcgccatggcgagtagaggccctcgcctcgcgagctacccagttacagaatgccttg-ttgggttaaatgcgatctttgtcgca 32802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 35 - 133
Target Start/End: Original strand, 51526 - 51624
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagatt 133  Q
    |||||||||||||| ||| | ||||||||||||||||||||||| |||| ||||||||||||||| ||| || || |||||||||||||||||||||||    
T  51526 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacctggaaagatt 51624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 11 - 133
Target Start/End: Original strand, 2703 - 2825
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||||||| |||||||||  ||| |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||     
T  2703 cagagagcttgcaagatttcgtgattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 2802  T
Q  111 atgagattgaacctggaaagatt 133  Q
    |||||||||||||||||||||||    
T  2803 atgagattgaacctggaaagatt 2825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 79; Significance: 5e-37; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 35 - 249
Target Start/End: Complemental strand, 7092 - 6878
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    ||||||| ||| || ||| | ||||||| |||||||||||| || |||| |||| ||||||||||||||||  ||| | |||||||||||||||   |||    
T  7092 ttttgacctttaagttgaaccttagatgtttttgagtgcctaaacatgtataatgatgattaggaaagattatagattaagattgaacctggaatagttt 6993  T
Q  135 tagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaat 234  Q
     |||||  ||||| | || || ||||| ||||||||||||||||||||||| |  ||||||| ||||||| ||||| ||||| | ||||||| |||||||    
T  6992 aagaatggatttttgggaattacacctgaactcgccatggcgagtagaggccctcgcctcgcaagctaaccagttatagaatgcattgtttaggttaaat 6893  T
Q  235 gcgatctttgtcgca 249  Q
    |||||||||||||||    
T  6892 gcgatctttgtcgca 6878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 35 - 249
Target Start/End: Complemental strand, 14472 - 14258
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    ||||||| ||| || ||| | ||||||| |||||||||||| || |||| |||| ||||||||||||||||  ||| | |||||||||||||||   |||    
T  14472 ttttgacctttaagttgaaccttagatgtttttgagtgcctaaacatgtataatgatgattaggaaagattatagattaagattgaacctggaatagttt 14373  T
Q  135 tagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaat 234  Q
     |||||  ||||| | || || ||||| ||||||||||||||||||||||| |  ||||||| ||||||| ||||| ||||| | ||||||| |||||||    
T  14372 aagaatggatttttgggaattacacctgaactcgccatggcgagtagaggccctcgcctcgcaagctaaccagttatagaatgcattgtttaggttaaat 14273  T
Q  235 gcgatctttgtcgca 249  Q
    |||||||||||||||    
T  14272 gcgatctttgtcgca 14258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 681 - 798
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||||||||| |||||||  || ||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||||| || ||     
T  681 cagagagcattcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagaatgtagg 780  T
Q  111 atgagattgaacctggaa 128  Q
    ||||||||||||||||||    
T  781 atgagattgaacctggaa 798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 12427 - 12547
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  ||| |||||||||||||||||| | |||||||| |||||||||||||| |||||||||| ||||||||||||| || ||     
T  12427 cagagagcatgcaagatttcgtgattttgacttttgagatgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtagg 12526  T
Q  111 atgagattgaacctggaaaga 131  Q
    |||||||||||||||||||||    
T  12527 atgagattgaacctggaaaga 12547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 11 - 135
Target Start/End: Complemental strand, 39262 - 39138
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  ||  ||||||||||  || ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || |||    
T  39262 cagagagcatgcaagatttcgtaattttgactttgaagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 39163  T
Q  111 atgagattgaacctggaaagatttt 135  Q
    |||||||||||||||||||||||||    
T  39162 atgagattgaacctggaaagatttt 39138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 77; Significance: 8e-36; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 11 - 199
Target Start/End: Original strand, 339569 - 339757
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||||||| |||||||||  ||| |||||||||||||| ||| | ||| |||||||||||||||||||| |||||||||||||||||||| || || ||     
T  339569 cagagagcttgcaagatttcgtgattttgacttttgagttgatccttaaatgcttttgagtgcctgaatttgtctaataatgattaggaatgaatgtagg 339668  T
Q  111 atgagattgaacctggaaagattttagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgag 199  Q
    ||||||||||||||||||||||| |||||| || ||| | || |   || | ||||||||| |||||| ||||||||  ||||||||||    
T  339669 atgagattgaacctggaaagattgtagaatgaacttttgggaatctgacatgaactcgccacggcgagcagaggctctcgcctcgcgag 339757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 71789 - 71729
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagt 71  Q
    ||||||||||||||||||  ||| |||||||||||||| ||| | |||||||  |||||||    
T  71789 cagagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgtctttgagt 71729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 11 - 134
Target Start/End: Complemental strand, 407 - 284
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  ||| |||||||||||||| ||| | ||| ||| ||||||||||||||| |||||||||||||||||||||||| || ||     
T  407 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttatatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 308  T
Q  111 atgagattgaacctggaaagattt 134  Q
    ||||||||||||||||||||||||    
T  307 atgagattgaacctggaaagattt 284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 76; Significance: 3e-35; HSPs: 3)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 28899 - 29018
Alignment:
Q  12 agagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaa 111  Q
    ||||||||||||||||| |||  |||||||||||| | ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||||    
T  28899 agagagcatgcaagattttgtaattttgacttttgggttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaa 28998  T
Q  112 tgagattgaacctggaaaga 131  Q
    ||||||||||||| ||||||    
T  28999 tgagattgaacctagaaaga 29018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 249
Target Start/End: Original strand, 7845 - 7930
Alignment:
Q  163 aactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaatgcgatctttgtcgca 249  Q
    |||||||||| ||||||| ||||||  |||||||||| |  | ||||||| ||| ||||||| | | ||||||||||||||||||||    
T  7845 aactcgccatagcgagtaaaggctctcgcctcgcgagttgcccagttacaaaatgccttgtt-agggtaaatgcgatctttgtcgca 7930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 126
Target Start/End: Original strand, 7682 - 7754
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctgg 126  Q
    |||||||| | ||||||||||||||| ||| || ||||||||||| | | ||  ||| |||||||||||||||    
T  7682 ctttagatacctttgagtgcctgaatctgtatattaatgattaggcacgtttttagattgagattgaacctgg 7754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 21 - 140
Target Start/End: Original strand, 16227 - 16346
Alignment:
Q  21 gcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattga 120  Q
    ||||||||  ||| |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| |  |||||||||||||    
T  16227 gcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttagaatgagattga 16326  T
Q  121 acctggaaagattttagaat 140  Q
    ||||||||||||||| ||||    
T  16327 acctggaaagattttcgaat 16346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 2064 - 2183
Alignment:
Q  12 agagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaa 111  Q
    ||||||||||||||||| |||  |||||||| ||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||||    
T  2064 agagagcatgcaagattttgtaattttgactgttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaa 2163  T
Q  112 tgagattgaacctggaaaga 131  Q
    |||||||||||||| |||||    
T  2164 tgagattgaacctgaaaaga 2183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 14 - 140
Target Start/End: Original strand, 8154 - 8279
Alignment:
Q  14 agagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatg 113  Q
    |||||||||||||||  ||| |||||||||||||| ||| | || |||||||||||||||||||| |||||||||||||||||||||||| || || |||    
T  8154 agagcatgcaagatttcgtgattttgacttttgagttgatcctt-gatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatg 8252  T
Q  114 agattgaacctggaaagattttagaat 140  Q
    |||||||||||||||||||| ||||||    
T  8253 agattgaacctggaaagattgtagaat 8279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0718 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 4760 - 4877
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  || ||||||||||||||| ||| | |||||||| |||||||||||||| |||||||||||||||||||||||| || ||     
T  4760 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 4859  T
Q  111 atgagattgaacctggaa 128  Q
    ||||||||||||||||||    
T  4860 atgagattgaacctggaa 4877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 10055 - 10172
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  || ||||||||||||||  ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||     
T  10055 cagagagcatgcaagatttcgtatttttgacttttgaattgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 10154  T
Q  111 atgagattgaacctggaa 128  Q
    ||||||||||||||||||    
T  10155 atgagattgaacctggaa 10172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 11 - 128
Target Start/End: Complemental strand, 13987 - 13870
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  || ||||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||  || ||     
T  13987 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaggatgtagc 13888  T
Q  111 atgagattgaacctggaa 128  Q
    ||||||||||||||||||    
T  13887 atgagattgaacctggaa 13870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 11 - 140
Target Start/End: Original strand, 17626 - 17755
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||   || |||||||||||||| | | | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||     
T  17626 cagagagcatgcaagatttcatgattttgacttttgagttaaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 17725  T
Q  111 atgagattgaacctggaaagattttagaat 140  Q
    ||||||||||||||||| ||||| ||||||    
T  17726 atgagattgaacctggatagattgtagaat 17755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 128
Target Start/End: Complemental strand, 5339 - 5223
Alignment:
Q  12 agagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaa 111  Q
    ||||||||||||||||| |||  |||||||||||||| ||| | |||||||||||||||||| |||| |||||||||||||||||||||||| || || |    
T  5339 agagagcatgcaagattttgtaattttgacttttgagttgaaccttagatgcttttgagtgcatgaagatgtctaataatgattaggaaagaatgtagga 5240  T
Q  112 tgagattgaacctggaa 128  Q
    |||||||||||||||||    
T  5239 tgagattgaacctggaa 5223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 199
Target Start/End: Complemental strand, 5203 - 5162
Alignment:
Q  158 accttaactcgccatggcgagtagaggctcctgcctcgcgag 199  Q
    |||| ||||||||| ||||||||||||||| |||||||||||    
T  5203 acctgaactcgccacggcgagtagaggctcttgcctcgcgag 5162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 72; Significance: 7e-33; HSPs: 2)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 11 - 249
Target Start/End: Complemental strand, 530 - 294
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  ||| |||||||||||||  ||| | |||||||| || ||||||||||| |||||||||| ||||||||||||| || ||     
T  530 cagagagcatgcaagatttcgtgattttgacttttgaattgaaccttagatgcctt-gagtgcctgaacatgtctaatattgattaggaaagaatgtagg 432  T
Q  111 atgagattgaacctggaaagattttagaat-taattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactag-- 207  Q
    ||||||||||||||||||| |  |||||||  || ||| | || |   | || |||||||||||||||| ||||||||  |||||||||||  |||||      
T  431 atgagattgaacctggaaata-cttagaatggaactttggagaatctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgagc--actagta 336  T
Q  208 ttacagaataccttgtttatgttaaatgcgatctttgtcgca 249  Q
    ||||||||| ||||||||| ||||||||||||||||||||||    
T  335 ttacagaatgccttgtttaggttaaatgcgatctttgtcgca 294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 97
Target Start/End: Complemental strand, 9424 - 9381
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattag 97  Q
    ||||||||| |||||||||||||||||||| ||| |||||||||    
T  9424 ctttagatgattttgagtgcctgaatatgtataagaatgattag 9381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 11 - 126
Target Start/End: Complemental strand, 29039 - 28924
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  ||| ||||||||||||||  || | |||||||||||||||| |||||| |||||||||||||||||||||||| || |||    
T  29039 cagagagcatgcaagatttcgtgattttgacttttgagtagatccttagatgcttttgagttcctgaacatgtctaataatgattaggaaagaatgtaga 28940  T
Q  111 atgagattgaacctgg 126  Q
    ||||||||||||||||    
T  28939 atgagattgaacctgg 28924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 56 - 249
Target Start/End: Original strand, 7720 - 7912
Alignment:
Q  56 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaattaattttcgtgagtt 155  Q
    ||||||| ||||||||| ||||| |||| ||||||||||||||||||||   ||| ||||||||||||| |||   ||| ||||| |||||| | | |||    
T  7720 ttagatgtttttgagtgtctgaacatgtgtaataatgattaggaaagatcctagactgagattgaacctagaatagtttaagaatgaatttttgggggtt 7819  T
Q  156 gcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaatgcgatctttgtcgca 249  Q
     ||||| |||||||||| ||||||||||||||  |||||||||| || || ||| |||||| |||||  || ||||||||||||||||||||||    
T  7820 acacctgaactcgccatagcgagtagaggctctcgcctcgcgagttaccttgttccagaatgccttg-ctaggttaaatgcgatctttgtcgca 7912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 11 - 128
Target Start/End: Complemental strand, 428 - 311
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  ||  |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||     
T  428 cagagagcatgcaagatttcgtaattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 329  T
Q  111 atgagattgaacctggaa 128  Q
    ||||||||||| ||||||    
T  328 atgagattgaatctggaa 311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 11 - 128
Target Start/End: Complemental strand, 5204 - 5087
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  ||  |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||     
T  5204 cagagagcatgcaagatttcgtaattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 5105  T
Q  111 atgagattgaacctggaa 128  Q
    ||||||||||| ||||||    
T  5104 atgagattgaatctggaa 5087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 11 - 128
Target Start/End: Complemental strand, 13703 - 13586
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  ||| |||||||||||||| ||| | ||| ||||||||||||||||||| |||||||||||||||||||||||| || ||     
T  13703 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttatatgcttttgagtgcctgaaaatgtctaataatgattaggaaagaatgtagg 13604  T
Q  111 atgagattgaacctggaa 128  Q
    |||||| |||||||||||    
T  13603 atgagactgaacctggaa 13586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 70; Significance: 1e-31; HSPs: 3)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 15094 - 15211
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  || |||||||||||| || ||| |  ||||||||||||||||||| ||||||||||||||||||||||||||| || ||     
T  15094 cagagagcatgcaagatttcgtatttttgacttttaagttgaaccgtagatgcttttgagtgccttaatatgtctaataatgattaggaaagaatgtagg 15193  T
Q  111 atgagattgaacctggaa 128  Q
    ||||||||||||||||||    
T  15194 atgagattgaacctggaa 15211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 85
Target Start/End: Original strand, 32894 - 32968
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtct 85  Q
    ||||||||||||||||||  || ||||||||||||||| ||| | |||||||||||||| |||||||| ||||||    
T  32894 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgaatgcctgaacatgtct 32968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 96
Target Start/End: Complemental strand, 7775 - 7705
Alignment:
Q  26 attctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 96  Q
    ||||||| |||||||| |||||| ||| | |||||||||||||||||||| || |||| || ||| |||||    
T  7775 attctgtatttttgacctttgagttgaaccttagatgcttttgagtgcctaaagatgtttattaaagatta 7705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 11 - 128
Target Start/End: Complemental strand, 47478 - 47361
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  || || |||||||||||| ||| | ||||||||||||||||| ||||||||||||||||||||||||||| || || ||     
T  47478 cagagagcatgcaagatttcgtattgttgacttttgagttgaaccttagatgcttttgagtgtctgaatatgtctaataatgattaggaatgaatgtagg 47379  T
Q  111 atgagattgaacctggaa 128  Q
    ||||||||||||||||||    
T  47378 atgagattgaacctggaa 47361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 64305 - 64367
Alignment:
Q  34 tttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 96  Q
    ||||||||||||||| ||| | |||||||||||||||||||| || |||| || ||| |||||    
T  64305 tttttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttattaaagatta 64367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 12 - 129
Target Start/End: Original strand, 23921 - 24038
Alignment:
Q  12 agagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaa 111  Q
    |||||||||||||||||  ||| |||||||||||||| ||| | |||||| |||||||||||||||| |||||||||||||||||||||| | || || |    
T  23921 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagattcttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtagga 24020  T
Q  112 tgagattgaacctggaaa 129  Q
    ||||||||||||||||||    
T  24021 tgagattgaacctggaaa 24038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 34529 - 34593
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcct 75  Q
    ||||||||||| |  ||||||| |||||||||| |||| ||| | ||||||| ||||||||||||    
T  34529 cagagagcatgtagaattctgtatttttgacttgtgagttgaaccttagatgtttttgagtgcct 34593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 12 - 247
Target Start/End: Complemental strand, 10412 - 10178
Alignment:
Q  12 agagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaa 111  Q
    |||||||||| |||||| |||| |||||||||||||| ||| | |||||||| ||||||||||| || ||||||| || ||||||||||||| || || |    
T  10412 agagagcatgtaagattttgtgattttgacttttgagttgaaccttagatgcctttgagtgcctaaacatgtctattattgattaggaaagaatgtagga 10313  T
Q  112 tgagattgaacctggaaagattttagaa-ttaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagtta 210  Q
    ||||||||||||||||||||  ||||||   || ||| | || |   | || |||||||||||||||| ||||||||  |||||||||||      ||||    
T  10312 tgagattgaacctggaaaga-cttagaaggaaactttggagaatctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgagcacttgtgtta 10215  T
Q  211 cagaataccttgtttatgttaaatgcgatctttgtcg 247  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  10214 cagaatgccttgtttaggttaaatgcgatctttgtcg 10178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 11 - 199
Target Start/End: Complemental strand, 40414 - 40227
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  ||| |||||||||||||| ||| | ||||||||||||||||||||||| |||| || ||||||||||||| || || ||     
T  40414 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttattaatgattaggaaggaatgtagg 40315  T
Q  111 atgagattgaacctggaaagattttagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgag 199  Q
    |||||||||||||| || ||||| |||||| || ||| |  | |   |||| ||||||||| |||||||||||||||  ||||||||||    
T  40314 atgagattgaacct-gacagattgtagaatgaacttttggaaatctgacctgaactcgccacggcgagtagaggctctcgcctcgcgag 40227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 11 - 249
Target Start/End: Original strand, 79950 - 80187
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  ||| |||||||||||||| ||| | ||| ||||  ||||||||||||| |||||||||| ||||||||||||| || ||     
T  79950 cagagagcatgcaagatttcgtgattttgacttttgagttgaacattaaatgccattgagtgcctgaacatgtctaatattgattaggaaagaatgtagg 80049  T
Q  111 atgagattgaacctggaaagattttagaat-taattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagcta-actagt 208  Q
    |||||||||||||||||||||  |||||||  || ||| | || |   | || |||||| ||||||||| ||||||||  ||||||||||| | | || |    
T  80050 atgagattgaacctggaaaga-cttagaatgaaactttggagaatctga-ctgaactcgacatggcgagcagaggctctcgcctcgcgagcaatagta-t 80146  T
Q  209 tacagaataccttgtttatgttaaatgcgatctttgtcgca 249  Q
    |||||||| ||||||||| ||||||||||||||| ||||||    
T  80147 tacagaatgccttgtttaggttaaatgcgatcttcgtcgca 80187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 35 - 249
Target Start/End: Complemental strand, 7015 - 6801
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    |||||||||||||| ||| | || |||| ||||||||||||| | |||||||||||| |||||||||||||||||| |||||||||||||||||   |||    
T  7015 ttttgacttttgagttgatcctttgatg-ttttgagtgcctggacatgtctaataataattaggaaagattggagattgagattgaacctggaatagttt 6917  T
Q  135 tagaa-ttaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaa 233  Q
     ||||   || ||  | |||||  |||| ||||||||||||||||| ||||| |   ||||||||  | |||||||||| ||| ||||||||| | ||||    
T  6916 aagaacgaaacttgtgggagttatacctgaactcgccatggcgagtggaggccctcccctcgcgaattgactagttacaaaatgccttgtttaggataaa 6817  T
Q  234 tgcgatctttgtcgca 249  Q
    ||||||||||||||||    
T  6816 tgcgatctttgtcgca 6801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 56 - 248
Target Start/End: Original strand, 691 - 888
Alignment:
Q  56 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattg------gagaatgagattgaacctggaaagattttagaattaattttcg 149  Q
    ||||||| ||||||||||||||| |||| ||||||||||||||||||||||      |||| |||||||||||||| ||   ||| || ||  ||||| |    
T  691 ttagatgtttttgagtgcctgaacatgtataataatgattaggaaagattgtagattgagattgagattgaacctgtaatagtttaaggatggatttt-g 789  T
Q  150 tgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaatgcgatctttgtcgc 248  Q
    |||||||||||| |||||||| | |||||||||||| |  |||||||||  || | ||||||| ||| ||||||||| |||||||||||||||||||||    
T  790 tgagttgcacctgaactcgccttagcgagtagaggccctcgcctcgcgaattacccagttacataatgccttgtttaggttaaatgcgatctttgtcgc 888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 11 - 125
Target Start/End: Original strand, 13226 - 13340
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  ||  |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||     
T  13226 cagagagcatgcaagatttcgtaattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 13325  T
Q  111 atgagattgaacctg 125  Q
    |||||||||| ||||    
T  13326 atgagattgagcctg 13340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 14 - 128
Target Start/End: Complemental strand, 32553 - 32439
Alignment:
Q  14 agagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatg 113  Q
    |||||||||||||||  || ||||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||| ||||||||| ||  | |||    
T  32553 agagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgactaggaaagaatgtgggatg 32454  T
Q  114 agattgaacctggaa 128  Q
    |||||||||||||||    
T  32453 agattgaacctggaa 32439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1842 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 678 - 791
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  ||  |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| |  ||     
T  678 cagagagcatgcaagatttcgtaattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttagg 777  T
Q  111 atgagattgaacct 124  Q
    ||||||||||||||    
T  778 atgagattgaacct 791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 11 - 140
Target Start/End: Original strand, 631 - 760
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||||||| || |||||| |||| ||||||| || ||| ||| | ||| ||||||||||||||||||| |||||||||||||||||||||||| || |||    
T  631 cagagagcttgtaagattttgtgattttgaccttcgagttgatccttatatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 730  T
Q  111 atgagattgaacctggaaagattttagaat 140  Q
    ||||||||||| ||| ||||||| ||||||    
T  731 atgagattgaatctgaaaagattgtagaat 760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 11 - 140
Target Start/End: Complemental strand, 5026 - 4897
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||||||| |||||||||  |||  ||| ||||||||| ||| | |||||||||||||||||||| || ||||||| |||||| |||| ||||||| |||    
T  5026 cagagagcttgcaagatttcgtgactttaacttttgagttgaaccttagatgcttttgagtgcctaaacatgtctattaatgactagggaagattgtaga 4927  T
Q  111 atgagattgaacctggaaagattttagaat 140  Q
    ||||||||||||||| ||||||||||||||    
T  4926 atgagattgaacctgaaaagattttagaat 4897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 56 - 248
Target Start/End: Original strand, 5785 - 5976
Alignment:
Q  56 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaattaattttcgtgagtt 155  Q
    ||||||| |||||||| |||||| |||| ||||||||||||||||| |||| ||| |||||||||||| | ||   ||| || ||  ||||| |||| ||    
T  5785 ttagatgtttttgagtacctgaacatgtataataatgattaggaaaaattgtagattgagattgaaccagtaatagtttaaggatggatttt-gtgattt 5883  T
Q  156 gcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgtttatgttaaatgcgatctttgtcgc 248  Q
    |||||| |||||||| | |||||||||||| |  |||||||||  || | ||||||| ||| ||||||||| |||||||||||||||||||||    
T  5884 gcacctgaactcgccttagcgagtagaggccctcgcctcgcgaattacccagttacataatgccttgtttaggttaaatgcgatctttgtcgc 5976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 127
Target Start/End: Original strand, 20044 - 20160
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  |||  ||||||||||||| ||| | |||||||||||||||| |||||| |||| ||||||||| ||||||||| || |||    
T  20044 cagagagcatgcaagatttcgtgaatttgacttttgagttgatccttagatgcttttgagttcctgaacatgtttaataatgagtaggaaagaatgtaga 20143  T
Q  111 atgagattgaacctgga 127  Q
    |||||||||||||||||    
T  20144 atgagattgaacctgga 20160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 78
Target Start/End: Original strand, 65412 - 65479
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaa 78  Q
    ||||||||||| |||||| |||  |||||||||||||| ||| | ||||||| |||||||||||||||    
T  65412 cagagagcatgtaagattttgtagttttgacttttgagttgaaccttagatgtttttgagtgcctgaa 65479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 125
Target Start/End: Complemental strand, 16771 - 16657
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  ||  ||||||||||| || ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||     
T  16771 cagagagcatgcaagatttcgtacttttgacttttaagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 16672  T
Q  111 atgagattgaacctg 125  Q
    | |||||||||||||    
T  16671 acgagattgaacctg 16657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 35 - 141
Target Start/End: Complemental strand, 23361 - 23255
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattt 134  Q
    |||||||||||||| ||| | |||||||| |||||||||||||| |||||||||||||||||||||||| || || ||||||||| | |||||||||||     
T  23361 ttttgacttttgagttgatccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattggatctggaaagattg 23262  T
Q  135 tagaatt 141  Q
    |||||||    
T  23261 tagaatt 23255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 11 - 128
Target Start/End: Complemental strand, 2444 - 2327
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||||||||||||  || ||||||||||||||| ||| | |||||||| ||||||||||||||  ||||||||||| |||||||| || || ||     
T  2444 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcctttgagtgcctgaacgtgtctaataataattaggaaggaatgtagg 2345  T
Q  111 atgagattgaacctggaa 128  Q
    ||||||||||||||||||    
T  2344 atgagattgaacctggaa 2327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 62; Significance: 7e-27; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 56 - 201
Target Start/End: Original strand, 43447 - 43592
Alignment:
Q  56 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaattaattttcgtgagtt 155  Q
    ||||||| ||||||||||||||| ||||||||| |||||||| |||||||  ||| |||||||||||||||||   ||| |||||  ||||| | |||||    
T  43447 ttagatgtttttgagtgcctgaacatgtctaattatgattagaaaagattctagattgagattgaacctggaatagtttaagaatggatttttgggagtt 43546  T
Q  156 gcaccttaactcgccatggcgagtagaggctcctgcctcgcgagct 201  Q
     |||||  |||||||||| |||||||||||||  ||||||||||||    
T  43547 acacctgtactcgccatgacgagtagaggctctcgcctcgcgagct 43592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 56 - 201
Target Start/End: Original strand, 47367 - 47512
Alignment:
Q  56 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaattaattttcgtgagtt 155  Q
    ||||||| ||||||||||||||| ||||||||| |||||||| |||||||  ||| |||||||||||||||||   ||| |||||  ||||| | |||||    
T  47367 ttagatgtttttgagtgcctgaacatgtctaattatgattagaaaagattctagattgagattgaacctggaatagtttaagaatggatttttgggagtt 47466  T
Q  156 gcaccttaactcgccatggcgagtagaggctcctgcctcgcgagct 201  Q
     |||||  ||| |||||| |||||||||||||  ||||||||||||    
T  47467 acacctgtactagccatgacgagtagaggctctcgcctcgcgagct 47512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 35 - 127
Target Start/End: Complemental strand, 12407 - 12315
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctgga 127  Q
    |||||||||||||  ||| | ||||||||||||||||| |||||||||| ||||||||||||||||||| || ||||||||||||||||||||    
T  12407 ttttgacttttgaattgatccttagatgcttttgagtgtctgaatatgtttaataatgattaggaaagaatgtagaatgagattgaacctgga 12315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 14 - 122
Target Start/End: Original strand, 6449 - 6557
Alignment:
Q  14 agagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatg 113  Q
    |||| ||||||||||   || |||||||||||||||||| | |||||||| ||| |||||||||| |||||||||||||||||||||||| || ||||||    
T  6449 agagaatgcaagatttcatgattttgacttttgagatgatccttagatgccttttagtgcctgaacatgtctaataatgattaggaaagaatgtagaatg 6548  T
Q  114 agattgaac 122  Q
    |||||||||    
T  6549 agattgaac 6557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 12 - 128
Target Start/End: Complemental strand, 21392 - 21276
Alignment:
Q  12 agagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaa 111  Q
    ||||||||||||||||| |||  |||||||||||||| ||| | ||||||| |||| |||||||||| ||||||||||||||||| |||||| || || |    
T  21392 agagagcatgcaagattttgtaattttgacttttgagttgaaccttagatgttttttagtgcctgaacatgtctaataatgattatgaaagaatgtagga 21293  T
Q  112 tgagattgaacctggaa 128  Q
    |||||||| ||||||||    
T  21292 tgagattgtacctggaa 21276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 249
Target Start/End: Original strand, 9452 - 9689
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||| |||||||||||||   || ||| |||||||||| ||| | |||||||| |||||||||||||| |||||||||| |||||| |||||| || ||     
T  9452 cagatagcatgcaagatttcatgatttcgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattacgaaagaatgtagg 9551  T
Q  111 atgagattgaacctggaaagattttagaat-taattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactag-- 207  Q
    ||||||||||| |||||||||  |||||||  || ||| | || |   | || |||||| ||||||||| ||||||||  |||||||||||  |||||      
T  9552 atgagattgaatctggaaaga-cttagaatgaaactttggagaatctga-ctgaactcgtcatggcgagcagaggctctcgcctcgcgagc--actagta 9647  T
Q  208 ttacagaataccttgtttatgttaaatgcgatctttgtcgca 249  Q
    ||||||||| ||||||||| |||||||| |||||||||||||    
T  9648 ttacagaatgccttgtttaggttaaatgtgatctttgtcgca 9689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 26 - 128
Target Start/End: Complemental strand, 1391 - 1289
Alignment:
Q  26 attctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctg 125  Q
    ||||||| ||||||||||||||| ||| | |||||||| |||||||||||||| ||  |||||||||||||||||||| || || |||||||||||||||    
T  1391 attctgtatttttgacttttgagttgaaccttagatgcctttgagtgcctgaacattactaataatgattaggaaagaatgtaggatgagattgaacctg 1292  T
Q  126 gaa 128  Q
    |||    
T  1291 gaa 1289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 35 - 128
Target Start/End: Complemental strand, 6072 - 5979
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaa 128  Q
    ||||||||||| || ||| | ||||||| ||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||| |||||    
T  6072 ttttgactttttagttgatccttagatgtttttgagtgcctgaacaggtctaataatgattaggaaagattggagattgagattgaacttggaa 5979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 39 - 128
Target Start/End: Original strand, 11170 - 11259
Alignment:
Q  39 gacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaa 128  Q
    |||||||||| ||| | |||||| |||||||||||||||| |||||||||||||||||||||||| || || ||||||||||||||||||    
T  11170 gacttttgagttgaaccttagattcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 11259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 14097 - 14027
Alignment:
Q  56 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctgg 126  Q
    ||||||| |||||||||||||||||||| |||||||||||||| ||| ||  ||| |||||||| ||||||    
T  14097 ttagatgattttgagtgcctgaatatgtataataatgattaggtaagtttttagattgagattggacctgg 14027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 11 - 118
Target Start/End: Complemental strand, 10647 - 10540
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||||||| |||||||||  ||| ||||||| |||||| ||| | |||||||||||||||||| |||| |||||||||||||||||||||||| || ||     
T  10647 cagagagcttgcaagatttcgtgattttgacctttgagttgatccttagatgcttttgagtgcatgaacatgtctaataatgattaggaaagaatgtagg 10548  T
Q  111 atgagatt 118  Q
    ||||||||    
T  10547 atgagatt 10540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 11 - 140
Target Start/End: Complemental strand, 10661 - 10539
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    |||||||| |||||||||  ||| |||||||||||||| ||| | |||||||||||||||||||| || ||| ||| || ||||||||||       |||    
T  10661 cagagagcttgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgccttaacatgcctagtagtgattaggaa-------aga 10569  T
Q  111 atgagattgaacctggaaagattttagaat 140  Q
    ||||||||||||||||||||||||||||||    
T  10568 atgagattgaacctggaaagattttagaat 10539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 55; Significance: 1e-22; HSPs: 3)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 26 - 128
Target Start/End: Complemental strand, 3958 - 3856
Alignment:
Q  26 attctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctg 125  Q
    ||||||| ||||||||||||||| ||| | |||||||  |||||||||||||| ||| ||| |||||||||||||||| || || |||||||||||||||    
T  3958 attctgtatttttgacttttgagttgaaccttagatgactttgagtgcctgaacatgactagtaatgattaggaaagaatgtaggatgagattgaacctg 3859  T
Q  126 gaa 128  Q
    |||    
T  3858 gaa 3856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 26 - 128
Target Start/End: Complemental strand, 8022 - 7920
Alignment:
Q  26 attctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctg 125  Q
    ||||||| ||||||||||||||| ||| | |||||||  |||||||||||||| ||| ||| |||||||||||||||| || || |||||||||||||||    
T  8022 attctgtatttttgacttttgagttgaaccttagatgactttgagtgcctgaacatgactagtaatgattaggaaagaatgtaggatgagattgaacctg 7923  T
Q  126 gaa 128  Q
    |||    
T  7922 gaa 7920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 126
Target Start/End: Original strand, 27303 - 27375
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctgg 126  Q
    ||||||||| ||||||||||||||| |||| |||||||||||||| ||| ||  ||  |||||||||||||||    
T  27303 ctttagatgattttgagtgcctgaacatgtataataatgattaggcaagtttttagtttgagattgaacctgg 27375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 128
Target Start/End: Complemental strand, 7102 - 6985
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggaga 110  Q
    ||||||||| ||||||||   | ||||||||||||||| ||| | |||||||| ||||||||||||||  ||||||||||| |||||||| || || ||     
T  7102 cagagagcacgcaagatttcatatttttgacttttgagttgaaccttagatgcctttgagtgcctgaacgtgtctaataattattaggaaggaatgtagg 7003  T
Q  111 atgagattgaacctggaa 128  Q
    ||||||||||||||||||    
T  7002 atgagattgaacctggaa 6985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 24268 - 24389
Alignment:
Q  11 cagagagcatgcaagattctgtg-tttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggag 109  Q
    ||||||||||||||||||  ||| ||||||||||||||| | | | ||||||||  ||||||||||||| |||||||||| ||||||||||||| |  ||    
T  24268 cagagagcatgcaagatttcgtgatttttgacttttgagtttaaccttagatgcccttgagtgcctgaacatgtctaatattgattaggaaagaatttag 24367  T
Q  110 aatgagattgaacctggaaaga 131  Q
     |||||||||||||| ||||||    
T  24368 gatgagattgaacctagaaaga 24389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0423 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 91
Target Start/End: Original strand, 10890 - 10970
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataat 91  Q
    ||||||||||||||||||  || ||||||||||||||| ||| | ||||||||||||||||||||||| ||||||||||||    
T  10890 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataat 10970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 48; Significance: 2e-18; HSPs: 3)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 10210 - 10289
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatga 114  Q
    ||||||| |||||||||| | ||||||| ||||||||||||||| |||||||||||||||||| |||||||  |||||||    
T  10210 ttttgacctttgagatgaaccttagatgtttttgagtgcctgaacatgtctaataatgattagtaaagattttagaatga 10289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 127 - 245
Target Start/End: Original strand, 10274 - 10391
Alignment:
Q  127 aaagattttagaattaattttcgtgagttgcaccttaactcgccatggcgagtagaggctcctgcctcgcgagctaactagttacagaataccttgttta 226  Q
    |||||||||||||| |||||| ||||||| ||||| |||||||||  ||||||||||||||  |||||||||| |  |  |||||| | | ||||| |||    
T  10274 aaagattttagaatgaatttttgtgagttacacctgaactcgccaaagcgagtagaggctctcgcctcgcgagttgtcctgttacatactgccttg-tta 10372  T
Q  227 tgttaaatgcgatctttgt 245  Q
     ||||||||||||||||||    
T  10373 ggttaaatgcgatctttgt 10391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 99
Target Start/End: Complemental strand, 1082 - 994
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattagga 99  Q
    ||||||||||||||||||  || ||||||||||||||| ||| | |||||||  |||||||||  ||| |||||||||| |||||||||    
T  1082 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgtctttgagtgctagaacatgtctaatattgattagga 994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 55 - 128
Target Start/End: Complemental strand, 12454 - 12381
Alignment:
Q  55 tttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaa 128  Q
    |||||||| ||||||||| ||||| |||| |||||||||||||||||||||  ||| |||||||||||||||||    
T  12454 tttagatgattttgagtgtctgaacatgtataataatgattaggaaagattttagattgagattgaacctggaa 12381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 128
Target Start/End: Complemental strand, 52067 - 51954
Alignment:
Q  15 gagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatga 114  Q
    |||| |||||||||  || ||||| ||||||||| | | | || ||||| |||||||||||||| | |||||||||||||||||||||| || || | ||    
T  52067 gagcttgcaagatttcgtattttttacttttgagttaaacctttgatgcctttgagtgcctgaacaagtctaataatgattaggaaagaatgtaggacga 51968  T
Q  115 gattgaacctggaa 128  Q
    ||||||||||||||    
T  51967 gattgaacctggaa 51954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 54 - 129
Target Start/End: Original strand, 128555 - 128630
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaa 129  Q
    ||||||||| |||| ||||||||||||||| |||||||||||||| ||| |  |||| ||||||||||||||||||    
T  128555 ctttagatgattttaagtgcctgaatatgtataataatgattaggcaagttatgagattgagattgaacctggaaa 128630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 126
Target Start/End: Complemental strand, 80798 - 80726
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctgg 126  Q
    ||||||||| ||||||||||||||| |||| |||||||||||||| ||| ||  ||| |||||||||||||||    
T  80798 ctttagatgattttgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgg 80726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 4)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 97
Target Start/End: Complemental strand, 1778 - 1692
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 97  Q
    ||||||||||||||||||  || |||||||||||| |  ||| | ||||||||||||| ||||||||| |||||||||| |||||||    
T  1778 cagagagcatgcaagatttcgtatttttgacttttaaattgaacgttagatgcttttgcgtgcctgaacatgtctaatattgattag 1692  T

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Target: scaffold0106; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 97
Target Start/End: Complemental strand, 7755 - 7669
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 97  Q
    ||||||||||||||||||  || |||||||||||| |  ||| | ||||||||||||| ||||||||| |||||||||| |||||||    
T  7755 cagagagcatgcaagatttcgtatttttgacttttaaattgaacgttagatgcttttgcgtgcctgaacatgtctaatattgattag 7669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 79
Target Start/End: Complemental strand, 16150 - 16082
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaat 79  Q
    |||||||||| |||||||  || ||||||||||||||  ||| |  |||||||||||||||||||||||    
T  16150 cagagagcatccaagatttcgtatttttgacttttgaattgaaccatagatgcttttgagtgcctgaat 16082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 122
Target Start/End: Original strand, 19252 - 19320
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaac 122  Q
    ||||||||| |||||| ||||||||||||| ||| |||||||||| ||| ||  ||| |||||||||||    
T  19252 ctttagatgattttgaatgcctgaatatgtgtaagaatgattaggcaagtttttagattgagattgaac 19320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 55 - 128
Target Start/End: Complemental strand, 227951 - 227878
Alignment:
Q  55 tttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaa 128  Q
    |||| ||| |||||||||||| || |||| |||||||||||||||||||||  ||| |||||||||||||||||    
T  227951 tttaaatgattttgagtgcctaaacatgtataataatgattaggaaagattctagattgagattgaacctggaa 227878  T

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Target: scaffold0076 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 128
Target Start/End: Original strand, 24183 - 24255
Alignment:
Q  56 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaa 128  Q
    ||||||| |||||||||||||||||| | |||||||||||||| ||| ||  ||| |||||||||||||||||    
T  24183 ttagatgattttgagtgcctgaatatatataataatgattaggcaagcttttagattgagattgaacctggaa 24255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 190905 - 190985
Alignment:
Q  16 agcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 96  Q
    ||||||||||||||||||||||||||||||||| | | | ||||||| |||||||||||| || |||| ||  ||||||||    
T  190905 agcatgcaagattctgtgtttttgacttttgagttcaaccttagatgtttttgagtgcctaaagatgtttagaaatgatta 190985  T

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Target: scaffold0017; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 192608 - 192688
Alignment:
Q  16 agcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 96  Q
    ||||||||||||||||||||||||||||||||| | | | ||||||| |||||||||||| || |||| ||  ||||||||    
T  192608 agcatgcaagattctgtgtttttgacttttgagttcaaccttagatgtttttgagtgcctaaagatgtttagaaatgatta 192688  T

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Target: scaffold0004 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 122
Target Start/End: Complemental strand, 332852 - 332784
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaac 122  Q
    ||||||||| |||||||||||||||||||| ||| |||||||||||||| ||  ||| |||||||||||    
T  332852 ctttagatgattttgagtgcctgaatatgtataagaatgattaggaaagtttttagattgagattgaac 332784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 70296 - 70211
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 96  Q
    |||||||||||||||||| | |  |||||||||||||| ||| | ||||||| ||||||||||||||| |||| || ||| |||||    
T  70296 cagagagcatgcaagattttatagttttgacttttgagttgaaccttagatgtttttgagtgcctgaagatgtatattaaagatta 70211  T

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Target: scaffold0601 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 7189 - 7118
Alignment:
Q  55 tttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctgg 126  Q
    |||||||| ||||||||| |||||||||| |||||||||||||| ||| ||  ||| |||||||||||||||    
T  7189 tttagatgattttgagtgactgaatatgtataataatgattaggcaagtttttagattgagattgaacctgg 7118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 26 - 97
Target Start/End: Complemental strand, 6067 - 5996
Alignment:
Q  26 attctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 97  Q
    ||||||||||||||||||||||| ||| | |||||||||||||||||||| || |||| || ||| ||||||    
T  6067 attctgtgtttttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttattaaagattag 5996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 26 - 97
Target Start/End: Complemental strand, 7262 - 7191
Alignment:
Q  26 attctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 97  Q
    ||||||||||||||||||||||| ||| | |||||||||||||||||||| || |||| || ||| ||||||    
T  7262 attctgtgtttttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttattaaagattag 7191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 122
Target Start/End: Complemental strand, 2311 - 2245
Alignment:
Q  56 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaac 122  Q
    ||||||| ||||||||||||||| |||   | ||||||||||||||||||| |||||||||||||||    
T  2311 ttagatgtttttgagtgcctgaagatgcacactaatgattaggaaagattgtagaatgagattgaac 2245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 25641 - 25567
Alignment:
Q  55 tttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaa 129  Q
    |||||||| ||||||||||||||| |||| |||||||||||||| ||| ||  ||| ||||||||||| ||||||    
T  25641 tttagatgattttgagtgcctgaaaatgtataataatgattaggcaagtttttagattgagattgaacttggaaa 25567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 97
Target Start/End: Complemental strand, 749 - 680
Alignment:
Q  28 tctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 97  Q
    ||||| ||||||||||||||| ||| | |||||||||||||||||||| || |||| |||||| ||||||    
T  749 tctgtatttttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttaataaagattag 680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 20483 - 20418
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctg 76  Q
    |||||||||||||||||| |||  |||||||||||||| ||| | ||||||| |||||||||||||    
T  20483 cagagagcatgcaagattttgtagttttgacttttgagttgaaccttagatgtttttgagtgcctg 20418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 38831 - 38761
Alignment:
Q  56 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctgg 126  Q
    ||||||| || ||||||| ||||||||| |||||||||||||| ||| ||  ||| |||||||||||||||    
T  38831 ttagatgattctgagtgcgtgaatatgtataataatgattaggcaagtttttagattgagattgaacctgg 38761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 16740 - 16804
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcct 75  Q
    ||||||||||| |  ||||||||||||||||||||||| |||   ||||||||||||||||||||    
T  16740 cagagagcatgtagaattctgtgtttttgacttttgagttgaagcttagatgcttttgagtgcct 16804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2044 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold2044
Description:

Target: scaffold2044; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 1075 - 1134
Alignment:
Q  12 agagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagt 71  Q
    |||||||||||||||||  ||| |||||||||||||| ||| | ||||||||||||||||    
T  1075 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagt 1134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0346 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 17343 - 17402
Alignment:
Q  12 agagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagt 71  Q
    ||||||||||||||||| |||  |||||||||||||| ||| | ||||||||||||||||    
T  17343 agagagcatgcaagattttgtaattttgacttttgagttgaaccttagatgcttttgagt 17402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1257 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold1257
Description:

Target: scaffold1257; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 207 - 249
Target Start/End: Original strand, 2030 - 2072
Alignment:
Q  207 gttacagaataccttgtttatgttaaatgcgatctttgtcgca 249  Q
    |||||||||| ||||||||| ||||||||||||||||||||||    
T  2030 gttacagaatgccttgtttaggttaaatgcgatctttgtcgca 2072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 35 - 97
Target Start/End: Complemental strand, 1369 - 1307
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 97  Q
    |||||||||||||| ||| | |||||||||||||||||||| || ||||||| ||| ||||||    
T  1369 ttttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtctattaaagattag 1307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 56 - 122
Target Start/End: Complemental strand, 3228 - 3162
Alignment:
Q  56 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaac 122  Q
    ||||||| ||||||||||||||||||||  ||||||||||||| ||| ||  ||| |||||||||||    
T  3228 ttagatgattttgagtgcctgaatatgtacaataatgattaggcaagtttttagattgagattgaac 3162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 126
Target Start/End: Complemental strand, 13667 - 13595
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctgg 126  Q
    ||||||||| || | |||||||||| |||| |||||||||||||| ||| ||  ||| |||||||||||||||    
T  13667 ctttagatgattctaagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgg 13595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 29219 - 29149
Alignment:
Q  56 ttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctgg 126  Q
    ||||||| |||||||||||||||||| | |||||||||||||| ||| ||  ||| |||||||| ||||||    
T  29219 ttagatgattttgagtgcctgaatatatataataatgattaggcaagtttttagattgagattggacctgg 29149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 77
Target Start/End: Complemental strand, 14980 - 14914
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctga 77  Q
    |||||||||||||||||| |||  |||||||||| ||| ||| | ||||||||||| ||||||||||    
T  14980 cagagagcatgcaagattttgtaattttgactttagagttgatccttagatgctttggagtgcctga 14914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1895 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1895
Description:

Target: scaffold1895; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 867 - 952
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 96  Q
    ||||||||||| |  ||| ||| ||||||||||||||| ||| | ||||||| ||||||||||||||| ||| ||| ||| |||||    
T  867 cagagagcatgtagaattatgtatttttgacttttgagttgaaccttagatgtttttgagtgcctgaagatgcctattaaagatta 952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 10440 - 10525
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 96  Q
    ||||||||||| |  ||||||| ||||||||||||||| ||| | ||||||| |||||||||| |||| ||| ||| ||| |||||    
T  10440 cagagagcatgtagaattctgtatttttgacttttgagttgaaccttagatgtttttgagtgcttgaagatgcctattaaagatta 10525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 15298 - 15383
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 96  Q
    ||||||||||| |  ||||||| ||||| ||||||||| ||| | ||||||| |||||||||| | || ||||||| ||| |||||    
T  15298 cagagagcatgtagaattctgtattttttacttttgagttgaaccttagatgtttttgagtgcttaaagatgtctattaaagatta 15383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2080 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold2080
Description:

Target: scaffold2080; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 98
Target Start/End: Original strand, 346 - 390
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattagg 98  Q
    ||||||||| |||||||||||||||||||| ||| ||||||||||    
T  346 ctttagatgattttgagtgcctgaatatgtataagaatgattagg 390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 98
Target Start/End: Original strand, 5916 - 5960
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattagg 98  Q
    ||||||||| |||||||| ||||||||||| ||||||||||||||    
T  5916 ctttagatgattttgagttcctgaatatgtataataatgattagg 5960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 15901 - 15837
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcct 75  Q
    ||||||||||| |  ||||||| ||||||||||||||| ||| | ||||||| ||||||||||||    
T  15901 cagagagcatgtagaattctgtatttttgacttttgagttgaaccttagatgtttttgagtgcct 15837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 21440 - 21492
Alignment:
Q  26 attctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaa 78  Q
    ||||||| ||||||||||||||| ||| | ||||||| |||||||||||||||    
T  21440 attctgtatttttgacttttgagttgaaccttagatgtttttgagtgcctgaa 21492  T

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Target: scaffold0210; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 29332 - 29384
Alignment:
Q  26 attctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaa 78  Q
    ||||||| ||||||||||||||| ||| | ||||||| |||||||||||||||    
T  29332 attctgtatttttgacttttgagttgaaccttagatgtttttgagtgcctgaa 29384  T

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Target: scaffold0005 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 126
Target Start/End: Complemental strand, 268188 - 268116
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctgg 126  Q
    ||||||||| || | |||||||||| |||| |||||||||||||| ||| ||  ||| |||||||||||||||    
T  268188 ctttagatgattctaagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgg 268116  T

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Target: scaffold1351 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1351
Description:

Target: scaffold1351; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 125
Target Start/End: Complemental strand, 542 - 471
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctg 125  Q
    |||| |||| |||||||||| ||||||||| |||||||||||| | ||| ||  ||| ||||||||||||||    
T  542 cttttgatgattttgagtgcttgaatatgtataataatgattacgcaagtttttagattgagattgaacctg 471  T

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Target: scaffold0780 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0780
Description:

Target: scaffold0780; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 122
Target Start/End: Original strand, 2934 - 3001
Alignment:
Q  55 tttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaac 122  Q
    |||||||| |||||||||||| ||||| | |||||||||||||| ||| ||  ||| |||||||||||    
T  2934 tttagatggttttgagtgccttaatatatataataatgattaggcaagtttttagattgagattgaac 3001  T

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Target: scaffold0393 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 97
Target Start/End: Complemental strand, 1975 - 1904
Alignment:
Q  26 attctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 97  Q
    |||||||  |||||||||||||| ||| | |||||||||||||||||||| || |||| || ||| ||||||    
T  1975 attctgtaattttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttattaaagattag 1904  T

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Target: scaffold0158 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 96
Target Start/End: Complemental strand, 3321 - 3254
Alignment:
Q  29 ctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 96  Q
    |||| ||||||||||||||| ||| | |||||||||||||||||||| || |||| || ||| |||||    
T  3321 ctgtatttttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttattaaagatta 3254  T

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Target: scaffold0158; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 6982 - 6920
Alignment:
Q  34 tttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 96  Q
    ||||||||||||||| ||| | |||||||||||||||||||| || |||| || ||| |||||    
T  6982 tttttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttattaaagatta 6920  T

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Target: scaffold0040 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 126
Target Start/End: Original strand, 103257 - 103316
Alignment:
Q  67 tgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctgg 126  Q
    |||||||||||| |||| |||||||||||||| ||| ||  ||| |||||||||||||||    
T  103257 tgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgg 103316  T

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Target: scaffold0035 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 97
Target Start/End: Original strand, 46369 - 46432
Alignment:
Q  34 tttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 97  Q
    ||||||||||||||| ||| | |||||||||||||||||||| || |||| || ||| ||||||    
T  46369 tttttgacttttgagttgaaccttagatgcttttgagtgcctaaagatgtttattaaagattag 46432  T

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Target: scaffold0014 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 129
Target Start/End: Original strand, 206109 - 206184
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaa 129  Q
    ||||||||| |||||||||||||||||||| ||| |||||||| | ||| ||  ||| ||| ||||||| ||||||    
T  206109 ctttagatgattttgagtgcctgaatatgtataagaatgattaagcaagtttttagattgaaattgaacttggaaa 206184  T

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Target: scaffold1124 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1124
Description:

Target: scaffold1124; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 96
Target Start/End: Complemental strand, 2361 - 2291
Alignment:
Q  26 attctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 96  Q
    ||||||| |||||||| |||||| ||| | |||||||||||||||||||| || |||| || ||| |||||    
T  2361 attctgtatttttgacctttgagttgaaccttagatgcttttgagtgcctaaagatgtttattaaagatta 2291  T

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Target: scaffold0109 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 98
Target Start/End: Original strand, 35541 - 35575
Alignment:
Q  64 ttttgagtgcctgaatatgtctaataatgattagg 98  Q
    |||||||||||||||||||| ||||||||||||||    
T  35541 ttttgagtgcctgaatatgtataataatgattagg 35575  T

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Target: scaffold0109; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 128
Target Start/End: Original strand, 10954 - 11049
Alignment:
Q  33 gtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta-ggaaagattggagaatgagattgaacctggaa 128  Q
    |||||||||||||||| ||| | |||||||| ||||||| |||  |  || ||| ||||||||| |||| || ||| ||||||||||||||||||||    
T  10954 gtttttgacttttgagttgaaccttagatgcctttgagtacctttaggtgcctactaatgattagggaacgaatgg-gaatgagattgaacctggaa 11049  T

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Target: scaffold0029 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 13235 - 13173
Alignment:
Q  34 tttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 96  Q
    ||||||||||||||| ||| | |||||||||||||||||||| || |||| || ||| |||||    
T  13235 tttttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttattaaagatta 13173  T

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Target: scaffold0008 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 97
Target Start/End: Original strand, 30388 - 30450
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 97  Q
    |||||||||||||| ||| | |||||||||||||||||||| || || | |||||| ||||||    
T  30388 ttttgacttttgagttgaaccttagatgcttttgagtgccttaagatctttaataaagattag 30450  T

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Target: scaffold1326 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1326
Description:

Target: scaffold1326; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 1134 - 1183
Alignment:
Q  26 attctgtgtttttgacttttgagatgacctttagatgcttttgagtgcct 75  Q
    |||||||  ||||||||| |||| ||| ||||||||||||||||||||||    
T  1134 attctgtagttttgacttgtgagttgaactttagatgcttttgagtgcct 1183  T

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Target: scaffold0412 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 6050 - 6099
Alignment:
Q  26 attctgtgtttttgacttttgagatgacctttagatgcttttgagtgcct 75  Q
    |||||||  |||||||||||||| ||| | ||||||||||||||||||||    
T  6050 attctgtacttttgacttttgagttgaaccttagatgcttttgagtgcct 6099  T

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Target: scaffold0311 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 6712 - 6761
Alignment:
Q  26 attctgtgtttttgacttttgagatgacctttagatgcttttgagtgcct 75  Q
    ||||||| ||||||||||||||| ||| | ||||||| ||||||||||||    
T  6712 attctgtatttttgacttttgagttgaaccttagatgtttttgagtgcct 6761  T

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Target: scaffold0280 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 75
Target Start/End: Original strand, 18940 - 18985
Alignment:
Q  30 tgtgtttttgacttttgagatgacctttagatgcttttgagtgcct 75  Q
    |||| |||||||||||||| ||| | ||||||||||||||||||||    
T  18940 tgtgattttgacttttgagttgaaccttagatgcttttgagtgcct 18985  T

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Target: scaffold0101 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 8576 - 8661
Alignment:
Q  11 cagagagcatgcaagattctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta 96  Q
    ||||||||||| || |||| || |||||||| |||||| ||| | ||||||| |||||||| |||||| ||| ||| ||| |||||    
T  8576 cagagagcatgtaaaattcggtatttttgacctttgagttgaaccttagatgtttttgagtccctgaagatgcctattaaagatta 8661  T

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Target: scaffold1552 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1552
Description:

Target: scaffold1552; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 813 - 769
Alignment:
Q  27 ttctgtgtttttgacttttgagatgacctttagatgcttttgagt 71  Q
    ||||| |||||||||||||||| ||| | ||||||||||||||||    
T  813 ttctgagtttttgacttttgagttgaaccttagatgcttttgagt 769  T

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Target: scaffold0546 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 128
Target Start/End: Complemental strand, 2353 - 2258
Alignment:
Q  33 gtttttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgatta-ggaaagattggagaatgagattgaacctggaa 128  Q
    |||||||||||||||| ||| | |||||||| ||||||| |||  |  || ||| ||||||||| |||| || ||| ||||||||||||||||||||    
T  2353 gtttttgacttttgagttgaaccttagatgcctttgagtacctttaggtgcctactaatgattagggaacgaatgg-gaatgagattgaacctggaa 2258  T

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Target: scaffold0525 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 10642 - 10682
Alignment:
Q  162 taactcgccatggcgagtagaggctcctgcctcgcgagcta 202  Q
    ||||||||| ||||||||||||||||  |||||||||||||    
T  10642 taactcgccgtggcgagtagaggctctcgcctcgcgagcta 10682  T

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Target: scaffold0215 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 27308 - 27256
Alignment:
Q  26 attctgtgtttttgacttttgagatgacctttagatgcttttgagtgcctgaa 78  Q
    ||||||| ||||| ||||||||| ||| | ||||||| |||||||||||||||    
T  27308 attctgtattttttacttttgagttgaaccttagatgtttttgagtgcctgaa 27256  T

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Target: scaffold0141 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 202
Target Start/End: Complemental strand, 33498 - 33458
Alignment:
Q  162 taactcgccatggcgagtagaggctcctgcctcgcgagcta 202  Q
    ||||||||| ||||||||||||||||  |||||||||||||    
T  33498 taactcgccgtggcgagtagaggctctcgcctcgcgagcta 33458  T

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Target: scaffold0104 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 97
Target Start/End: Complemental strand, 2300 - 2240
Alignment:
Q  37 ttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 97  Q
    |||||||||||| ||| | |||||||||||| ||||||| || |||| |||||| ||||||    
T  2300 ttgacttttgagttgaaccttagatgcttttaagtgccttaagatgtttaataaagattag 2240  T

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Target: scaffold0104; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 97
Target Start/End: Complemental strand, 9982 - 9922
Alignment:
Q  37 ttgacttttgagatgacctttagatgcttttgagtgcctgaatatgtctaataatgattag 97  Q
    |||||||||||| ||| | |||||||||||| ||||||| || |||| |||||| ||||||    
T  9982 ttgacttttgagttgaaccttagatgcttttaagtgccttaagatgtttaataaagattag 9922  T

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Target: scaffold0079 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 75
Target Start/End: Complemental strand, 44526 - 44486
Alignment:
Q  35 ttttgacttttgagatgacctttagatgcttttgagtgcct 75  Q
    |||||||||||||| ||| | ||||||||||||||||||||    
T  44526 ttttgacttttgagttgaaccttagatgcttttgagtgcct 44486  T

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Target: scaffold0077 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 98
Target Start/End: Original strand, 55269 - 55313
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattagg 98  Q
    ||||||||| ||||||||||||||| |||| ||| ||||||||||    
T  55269 ctttagatgattttgagtgcctgaacatgtataagaatgattagg 55313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 81314 - 81354
Alignment:
Q  162 taactcgccatggcgagtagaggctcctgcctcgcgagcta 202  Q
    ||||||||| ||||||||||||||||  |||||||||||||    
T  81314 taactcgccgtggcgagtagaggctctcgcctcgcgagcta 81354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 97542 - 97498
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattagg 98  Q
    ||||||||| |||||| |||||||||||||  |||||||||||||    
T  97542 ctttagatgattttgaatgcctgaatatgtacaataatgattagg 97498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 106820 - 106776
Alignment:
Q  54 ctttagatgcttttgagtgcctgaatatgtctaataatgattagg 98  Q
    ||||||||| |||||| |||||||||||||  |||||||||||||    
T  106820 ctttagatgattttgaatgcctgaatatgtacaataatgattagg 106776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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