View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17749_high_11 (Length: 267)
Name: NF17749_high_11
Description: NF17749
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17749_high_11 |
 |  |
|
Alignment Details
Target: chr2 (Bit Score: 154; Significance: 9e-82; HSPs: 6)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 25551746 - 25551577
Alignment:
| Q |
1 |
attatgtaagaattatatgcattatggtatgatgaatttgtttggaattgtgtaagaatcatggtttttgtttggattatggtatggaatatgaaatttg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25551746 |
attatgtaagaattatatgcattatggtatgatgaatttgtttgggattatgtaagaatcatggtttttgtttggattatggtatggaatatgaaatttg |
25551647 |
T |
 |
| Q |
101 |
aatggaatatgttatgtatggatatttaaaagttgaaattttttaggtaattaaaaatgtatttttcttt |
170 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
25551646 |
aatggaatatgttatgtatggatatttaaaagttgaagttttttaggtaattaaaaatatatttttcttt |
25551577 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 25920702 - 25920566
Alignment:
| Q |
1 |
attatgtaagaattatatgcattatggtatgatgaatttgtttggaattgtg-taagaatcatggtttttgtttggattatggtatggaatatgaaattt |
99 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||| |||| ||| || ||||||||||| |||||||| |||||||||||||||||||||||||| |
|
|
| T |
25920702 |
attatgtaagaatcatatgcattatggtatgatgaatttggttgggattatgataagaatcatgatttttgtt-ggattatggtatggaatatgaaattt |
25920604 |
T |
 |
| Q |
100 |
gaatggaatatgttatgtatggatatttaaaagttgaa |
137 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
25920603 |
gaatggaatatgttatgtatggatatttaaaatttgaa |
25920566 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 89 - 172
Target Start/End: Complemental strand, 43568164 - 43568082
Alignment:
| Q |
89 |
atatgaaatttgaatggaatatgttatgtatggatatttaaaagttgaaattttttaggtaattaaaaatgtatttttctttgt |
172 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||| ||||||||||| || ||| || ||||||||||| |||| ||||||||| |
|
|
| T |
43568164 |
atatgaaatttgaatggaatatgttatctatggatgtttaaaagttg-aagtttgtaagtaattaaaaaagtatatttctttgt |
43568082 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 85 - 174
Target Start/End: Original strand, 39497662 - 39497750
Alignment:
| Q |
85 |
tggaatatgaaatttgaatggaatatgttatgtatggatatttaaaagttgaaattttttaggtaattaaaaatgtatttttctttgtac |
174 |
Q |
| |
|
|||| ||||||||| |||||||| |||||||||||||| ||||||| ||| || ||| |||||||||||||| ||||||||||||||| |
|
|
| T |
39497662 |
tggattatgaaattagaatggaacttgttatgtatggatgtttaaaatttg-aagtttgtaggtaattaaaaaaatatttttctttgtac |
39497750 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 154
Target Start/End: Original strand, 12438264 - 12438332
Alignment:
| Q |
85 |
tggaatatgaaatttgaatggaatatgttatgtatggatatttaaaagttgaaattttttaggtaattaa |
154 |
Q |
| |
|
|||| ||||||||| |||||||| ||||||||||||||| ||||||||||| || ||| ||||||||||| |
|
|
| T |
12438264 |
tggattatgaaattagaatggaacatgttatgtatggatgtttaaaagttg-aagtttgtaggtaattaa |
12438332 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 224 - 267
Target Start/End: Complemental strand, 25551555 - 25551512
Alignment:
| Q |
224 |
gatatttgcaggtagcctatttattctacggggtgggaacggat |
267 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||| |||| |
|
|
| T |
25551555 |
gatatttgcgggtagcctatttattctacggggtgggaatggat |
25551512 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 98; Significance: 2e-48; HSPs: 14)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 34591712 - 34591876
Alignment:
| Q |
1 |
attatgtaagaattatatgcattatggtatgatgaatttgtttggaattgtgtaagaatcatggtttttgtttggattatggtatggaatatgaaatttg |
100 |
Q |
| |
|
||||||||| ||| |||||||||||||||||||||||||| |||| ||| || |||||||||| ||||||||| |||||||||| ||| ||||| ||||| |
|
|
| T |
34591712 |
attatgtaataatcatatgcattatggtatgatgaatttgcttgggattatgcaagaatcatgatttttgtttagattatggtaaggattatgagatttg |
34591811 |
T |
 |
| Q |
101 |
aatggaatatgttatgtatggatatttaaaagttgaaattttttaggtaattaaaaatgtattttt |
166 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||| || ||| |||||||||||||| |||||||| |
|
|
| T |
34591812 |
aatggaatatgttatgtatggatctttaaaagttg-aagtttgtaggtaattaaaaaagtattttt |
34591876 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 6419087 - 6418915
Alignment:
| Q |
1 |
attatgtaagaattatatgcattatggtatgatgaatttgtttggaattgtgtaagaatcatggtttttgtttggattatggtatggaatatgaaatttg |
100 |
Q |
| |
|
|||||| ||| || |||||||||||||||||||||||||| |||| ||| |||||||||| | |||| || |||||||||||||| ||||||||||| |
|
|
| T |
6419087 |
attatgaaaggatcatatgcattatggtatgatgaatttgcttgggattatgtaagaatcgtaaatttttgttagattatggtatggattatgaaatttg |
6418988 |
T |
 |
| Q |
101 |
aatggaatatgttatgtatggatatttaaaagttgaaattttttaggtaattaaaaatgtatttttctttgtac |
174 |
Q |
| |
|
|||| |||||||||||||||||| |||| |||||| || ||| |||||||||||||| |||||||||||||||| |
|
|
| T |
6418987 |
aatgaaatatgttatgtatggatctttataagttg-aagtttgtaggtaattaaaaaagtatttttctttgtac |
6418915 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 173
Target Start/End: Complemental strand, 5560595 - 5560429
Alignment:
| Q |
5 |
tgtaagaattatatgcattatggtatgatgaatttgtttggaattgtgtaagaatcatggtttttgtttggattatggtatggaatatgaaatttgaatg |
104 |
Q |
| |
|
||||||||| ||||||| ||||||||||||||||| |||| ||| ||||||||||||| ||||||| |||||||||||| || |||||||||||||| |
|
|
| T |
5560595 |
tgtaagaatcgtatgcatgatggtatgatgaatttgcttgggattatgtaagaatcatgaattttgtt-ggattatggtatagattatgaaatttgaata |
5560497 |
T |
 |
| Q |
105 |
gaatatgttatgtatggatatttaaaagttgaaattttttaggtaattaaaaatgtatttttctttgta |
173 |
Q |
| |
|
| ||||||||||||||||| |||||||| || || ||| |||||||||||||| ||||||||||||||| |
|
|
| T |
5560496 |
gcatatgttatgtatggatctttaaaaggtg-aagtttgtaggtaattaaaaaggtatttttctttgta |
5560429 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 24988160 - 24988329
Alignment:
| Q |
1 |
attatgtaagaattatatgcattatggtatgatgaatttgtttggaattgtgtaagaatcatggtttttgtttggattatggtatggaatatgaaatttg |
100 |
Q |
| |
|
|||||| |||||| | |||||||| |||||||||||||| |||| ||| ||||||||| || |||||||| ||||||||||||||| ||||||||||| |
|
|
| T |
24988160 |
attatgaaagaatgacatgcatta--gtatgatgaatttgcttgggattatgtaagaattataatttttgtt-ggattatggtatggattatgaaatttg |
24988256 |
T |
 |
| Q |
101 |
aatggaatatgttatgtatggatatttaaaagttgaaattttttaggtaatta-aaaatgtatttttctttgta |
173 |
Q |
| |
|
|||| |||||||||||||||||| ||||||||||| || ||| |||||||||| |||| ||||||||||||||| |
|
|
| T |
24988257 |
aatgaaatatgttatgtatggatctttaaaagttg-aagtttgtaggtaattacaaaaagtatttttctttgta |
24988329 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 5551895 - 5551726
Alignment:
| Q |
1 |
attatgtaagaattatatgcattatggtatgatgaatttgtttggaattgtgtaagaatcatggtttttgtttggattatggtatggaatatgaaatttg |
100 |
Q |
| |
|
||||||||||||| ||||||| ||| ||||||||||||| |||| ||| ||||||||||||| |||||| |||||||||||||| || ||||||||||| |
|
|
| T |
5551895 |
attatgtaagaatcgtatgcatgatgatatgatgaatttgcttgggattatgtaagaatcatgatttttg-ttggattatggtatagattatgaaatttg |
5551797 |
T |
 |
| Q |
101 |
aatggaatatgttatgtatggatatttaaaagttgaaattttttaggtaattaaaaatgtatttttctttgtac |
174 |
Q |
| |
|
||| | ||||||||||||||| |||| ||| || || ||| || ||||||||||| |||||||||||||||| |
|
|
| T |
5551796 |
aat--agcatgttatgtatggatctttagaaggtg-aagtttgtatgtaattaaaaaagtatttttctttgtac |
5551726 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 51 - 157
Target Start/End: Complemental strand, 17612267 - 17612163
Alignment:
| Q |
51 |
tgtaagaatcatggtttttgtttggattatggtatggaatatgaaatttgaatggaatatgttatgtatggatatttaaaagttgaaattttttaggtaa |
150 |
Q |
| |
|
||||||||||||| |||||||| |||||||| |||| | ||||||||||||||||| |||||||||||||||| |||||| |||| || ||||||||||| |
|
|
| T |
17612267 |
tgtaagaatcatgatttttgtt-ggattatgatatgaactatgaaatttgaatggagtatgttatgtatggatctttaaaggttg-aagtttttaggtaa |
17612170 |
T |
 |
| Q |
151 |
ttaaaaa |
157 |
Q |
| |
|
||||||| |
|
|
| T |
17612169 |
ttaaaaa |
17612163 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 166
Target Start/End: Original strand, 26897701 - 26897859
Alignment:
| Q |
5 |
tgtaagaattatatgcattatggtatgatgaatttgtttggaattgtgtaagaatcatggtttttgtttggattatggtatggaatatgaaatttgaatg |
104 |
Q |
| |
|
||||||||| |||| ||||||| ||||||| ||||| ||| ||| ||||||||||||| |||||||| | ||||||||||| | | ||||||||||||| |
|
|
| T |
26897701 |
tgtaagaatcatattcattatgatatgatggatttgcttgagattatgtaagaatcatgatttttgttag-attatggtatgaattttgaaatttgaatg |
26897799 |
T |
 |
| Q |
105 |
gaatatgttatgtatggatatttaaaagttgaaattttttaggtaattaaaaatgtattttt |
166 |
Q |
| |
|
||||||||| |||| |||| |||||| |||| || ||| ||| |||||||||| |||||||| |
|
|
| T |
26897800 |
gaatatgttttgtacggatctttaaaggttg-aagtttgtagataattaaaaa-gtattttt |
26897859 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 71 - 174
Target Start/End: Original strand, 28762521 - 28762622
Alignment:
| Q |
71 |
tttggattatggtatggaatatgaaatttgaatggaatatgttatgtatggatatttaaaagttgaaattttttaggtaattaaaaatgtatttttcttt |
170 |
Q |
| |
|
||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||| | || ||| |||||||||||||| || |||||||| |
|
|
| T |
28762521 |
tttggattatggtatggaacatgaaatttcaatggaatatgttatgtatggatgtttaaaagtcg-aagtttgtaggtaattaaaaaaata-ttttcttt |
28762618 |
T |
 |
| Q |
171 |
gtac |
174 |
Q |
| |
|
|||| |
|
|
| T |
28762619 |
gtac |
28762622 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 85 - 170
Target Start/End: Complemental strand, 37827156 - 37827071
Alignment:
| Q |
85 |
tggaatatgaaatttgaatggaatatgttatgtatggatatttaaaagttgaaattttttaggtaattaaaaatgtatttttcttt |
170 |
Q |
| |
|
|||| ||||||||| |||||||| ||||||||||||||| |||||||||| ||| ||| |||||||||||||| ||||||||||| |
|
|
| T |
37827156 |
tggattatgaaattagaatggaacatgttatgtatggatgtttaaaagttaaaagtttgtaggtaattaaaaaaatatttttcttt |
37827071 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 69 - 173
Target Start/End: Complemental strand, 11125010 - 11124906
Alignment:
| Q |
69 |
tgtttggattatggtatggaatatga-aatttgaatggaatatgttatgtatggatatttaaaagttgaaattttttaggtaattaaaaatgtatttttc |
167 |
Q |
| |
|
|||||| ||||||||||| | ||||| |||||||||| ||||||||| ||||||| ||||||||||| || ||| |||||||||||||| || ||||| |
|
|
| T |
11125010 |
tgtttgaattatggtatgaattatgataatttgaatgaaatatgttacatatggatgtttaaaagttg-aagtttataggtaattaaaaaaatacttttc |
11124912 |
T |
 |
| Q |
168 |
tttgta |
173 |
Q |
| |
|
|||||| |
|
|
| T |
11124911 |
tttgta |
11124906 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 85 - 174
Target Start/End: Original strand, 52327646 - 52327734
Alignment:
| Q |
85 |
tggaatatgaaatttgaatggaatatgttatgtatggatatttaaaagttgaaattttttaggtaattaaaaatgtatttttctttgtac |
174 |
Q |
| |
|
|||| ||||||||| |||||||| || |||||||||||| ||||||||||| || ||| |||||||||||||| ||||| ||||||||| |
|
|
| T |
52327646 |
tggattatgaaattagaatggaacatattatgtatggatgtttaaaagttg-aagtttgtaggtaattaaaaaaatatttgtctttgtac |
52327734 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 71 - 129
Target Start/End: Complemental strand, 42152947 - 42152888
Alignment:
| Q |
71 |
tttggattatggtatggaatatgaaatttgaatggaatatg-ttatgtatggatatttaa |
129 |
Q |
| |
|
|||||||||||||||||| |||||||||||| || |||||| ||||||||| || ||||| |
|
|
| T |
42152947 |
tttggattatggtatggattatgaaatttgagtgaaatatgtttatgtatgcatgtttaa |
42152888 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 165
Target Start/End: Complemental strand, 5104272 - 5104179
Alignment:
| Q |
71 |
tttggattatggtatggaatatgaaatttgaatggaatatgttatgtatggatatttaaaagttgaaattttttaggtaattaaaaatgtatttt |
165 |
Q |
| |
|
|||| ||||||||||| | ||| ||||||||| || ||||||| ||||||| ||||||||| ||| ||| || |||||||||||| ||||||| |
|
|
| T |
5104272 |
tttgaattatggtatgaattatataatttgaataaaacatgttatatatggatgtttaaaagtcgaagtttatt-ggtaattaaaaaagtatttt |
5104179 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 112 - 157
Target Start/End: Original strand, 34296769 - 34296813
Alignment:
| Q |
112 |
ttatgtatggatatttaaaagttgaaattttttaggtaattaaaaa |
157 |
Q |
| |
|
|||| ||||||||||||||||||||| |||||| |||||||||||| |
|
|
| T |
34296769 |
ttatatatggatatttaaaagttgaagtttttt-ggtaattaaaaa |
34296813 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 97; Significance: 9e-48; HSPs: 7)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 23281460 - 23281630
Alignment:
| Q |
1 |
attatgtaagaattatatgcattatggtatgatgaatttgtttggaattgtgtaagaatcatggtttttgtttggattatggtatggaatatgaaatttg |
100 |
Q |
| |
|
||||| ||||||| ||||||||||||||||||||||||| |||| ||| ||||||||||||| |||||||| ||||||||||||||| ||| ||||||| |
|
|
| T |
23281460 |
attatctaagaatcatatgcattatggtatgatgaattttcttggtattatgtaagaatcatgatttttgtt-ggattatggtatggattataaaatttg |
23281558 |
T |
 |
| Q |
101 |
aatggaatatgttatgtatggatatttaaaagttgaaattttttaggtaattaaaaatgtatttttctttgta |
173 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||| || ||| || ||||| ||||| ||||||||||||||| |
|
|
| T |
23281559 |
aatggaatatgttatgtatggatctttaaaagttg-aagtttatacgtaataaaaaaagtatttttctttgta |
23281630 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 23399043 - 23398902
Alignment:
| Q |
1 |
attatgtaagaattatatgcattatggtatgatgaatttgtttggaattgtgtaagaatcatggtttttgtttggattatggtatggaatatgaaatttg |
100 |
Q |
| |
|
||||| ||||||| ||||||||||||||||||||||||| |||| ||| ||||||||||||| |||||||| |||||||| |||||| ||| ||||||| |
|
|
| T |
23399043 |
attatctaagaatcatatgcattatggtatgatgaattttcttggtattatgtaagaatcatgatttttgtt-ggattatgatatggattataaaatttg |
23398945 |
T |
 |
| Q |
101 |
aatggaatatgttatgtatggatatttaaaagttgaaattttt |
143 |
Q |
| |
|
||||||||||||||||||||||| ||| ||||||||| ||||| |
|
|
| T |
23398944 |
aatggaatatgttatgtatggatcttttaaagttgaagttttt |
23398902 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 2 - 157
Target Start/End: Original strand, 22740954 - 22741107
Alignment:
| Q |
2 |
ttatgtaagaattatatgcattatggtatgatgaatttgtttggaattgtgtaagaatcatggtttttgtttggattatggtatggaatatgaaatttga |
101 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||| |||| || ||| ||||||||||||| |||||||| ||| ||||||||||| ||| |||| ||| |
|
|
| T |
22740954 |
ttatgtaagaatcatatgcattatggtatgatgattttgcttatgattatgtaagaatcatgatttttgtt-ggactatggtatggattataaaatatga |
22741052 |
T |
 |
| Q |
102 |
atggaatatgttatgtatggatatttaaaagttgaaattttttaggtaattaaaaa |
157 |
Q |
| |
|
||||||||||||||||||| || ||||||||||| || ||| |||||||||||||| |
|
|
| T |
22741053 |
atggaatatgttatgtatgtatctttaaaagttg-aagtttataggtaattaaaaa |
22741107 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 43953967 - 43953834
Alignment:
| Q |
1 |
attatgtaagaattatatgcattatggtatgatgaatttgtttggaattgtgtaagaatcatggtttttgtttg-----gattatggtatggaatatgaa |
95 |
Q |
| |
|
||||||||||||| |||| |||||||||| ||||||||| |||| ||| |||||||||| |||||||| | | |||||||||||| |||||| |
|
|
| T |
43953967 |
attatgtaagaatcatatctattatggtattatgaatttgcttgggattatgtaagaatcccaatttttgttggattatggttatggtatggattatgaa |
43953868 |
T |
 |
| Q |
96 |
atttgaatggaatatgttatgtatggatatttaa |
129 |
Q |
| |
|
||||||||||||||||||||||||| || ||||| |
|
|
| T |
43953867 |
atttgaatggaatatgttatgtatgaatctttaa |
43953834 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 16027962 - 16028112
Alignment:
| Q |
1 |
attatgtaagaattatatgcattatggtatgatgaatttgtttggaattgtgtaagaatcatggtttttgtttggattatggtatggaatatgaaatttg |
100 |
Q |
| |
|
||||| ||| |||||||||||||||||||||||||||||| ||| ||| ||||||||| ||| | ||| ||||||| |||||||| || |
|
|
| T |
16027962 |
attatctaaaaattatatgcattatggtatgatgaatttgcttgagattatgtaagaattatgatatttttttggat------------tatgaaatatg |
16028049 |
T |
 |
| Q |
101 |
aatggaatatgttatgtatggatatttaaaagttgaaattttttaggtaattaaaaatgtattt |
164 |
Q |
| |
|
|||||||||||||||| || ||| ||||||||||| || ||| ||||||||| |||| |||||| |
|
|
| T |
16028050 |
aatggaatatgttatgcatagatctttaaaagttg-aagtttgtaggtaatttaaaaagtattt |
16028112 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 167
Target Start/End: Complemental strand, 8047479 - 8047398
Alignment:
| Q |
85 |
tggaatatgaaatttgaatggaatatgttatgtatggatatttaaaagttgaaattttttaggtaattaaaaatgtatttttc |
167 |
Q |
| |
|
|||| |||||||||| ||||||| || |||||||||||| ||||||| | ||| ||| |||||||||||||| ||||||||| |
|
|
| T |
8047479 |
tggattatgaaatttaaatggaacattttatgtatggattcttaaaag-tcaaagtttgtaggtaattaaaaaagtatttttc |
8047398 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 157
Target Start/End: Complemental strand, 4023096 - 4023036
Alignment:
| Q |
90 |
tatgaaatttgaatggaatatgttatgtatggatatttaaaagttgaaattttttaggtaattaaaaa |
157 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||| |
|
|
| T |
4023096 |
tatgaaatttgaatgga-----ttatgtatggatatttaaaagttgaagttttt--ggtaattaaaaa |
4023036 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 81; Significance: 3e-38; HSPs: 10)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 7845811 - 7845641
Alignment:
| Q |
1 |
attatgtaagaattatatgcattatggtatgatgaatttgtttggaattgtgtaagaatcatggtttttgtttggattatggtatggaatatgaaatttg |
100 |
Q |
| |
|
||||||||||||| ||||||||||||||| |||||||||| | | ||| ||||||||||||| |||||||| ||||||||||||| | |||||||||| |
|
|
| T |
7845811 |
attatgtaagaatcatatgcattatggtacgatgaatttgctcaggattatgtaagaatcatgatttttgtt-ggattatggtatgaattatgaaattta |
7845713 |
T |
 |
| Q |
101 |
aatggaatatgttatgtatggatatttaaaagttgaaattttttaggtaattaaaaatgtatttttctttgta |
173 |
Q |
| |
|
||||||||||||||||||||||| |||||||||| || ||| ||| |||| ||||| |||||||| |||||| |
|
|
| T |
7845712 |
aatggaatatgttatgtatggatctttaaaagtt-taagtttgtagataataaaaaaagtatttttttttgta |
7845641 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 134
Target Start/End: Complemental strand, 7844440 - 7844312
Alignment:
| Q |
5 |
tgtaagaattatatgcattatggtatgatgaatttgtttggaattgtgtaagaatcatggtttttgtttggattatggtatggaatatgaaatttgaatg |
104 |
Q |
| |
|
||||||||| ||||||| ||||||| |||||||||| | | ||| ||||||||||||| |||||||| ||||||||||||| | |||||||||| |||| |
|
|
| T |
7844440 |
tgtaagaatcatatgcaatatggtacgatgaatttgctcaggattatgtaagaatcatgatttttgtt-ggattatggtatgaattatgaaatttaaatg |
7844342 |
T |
 |
| Q |
105 |
gaatatgttatgtatggatatttaaaagtt |
134 |
Q |
| |
|
||||||||||||||||||| |||||||||| |
|
|
| T |
7844341 |
gaatatgttatgtatggatctttaaaagtt |
7844312 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 23406470 - 23406541
Alignment:
| Q |
1 |
attatgtaagaattatatgcattatggtatgatgaatttgtttggaattgtgtaagaatcatggtttttgtt |
72 |
Q |
| |
|
||||||||||||| ||||||||||||||||||| |||||| || ||||| ||||||||||||| |||||||| |
|
|
| T |
23406470 |
attatgtaagaatcatatgcattatggtatgataaatttggtttgaattatgtaagaatcatgatttttgtt |
23406541 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 83 - 141
Target Start/End: Complemental strand, 19248478 - 19248420
Alignment:
| Q |
83 |
tatggaatatgaaatttgaatggaatatgttatgtatggatatttaaaagttgaaattt |
141 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||| ||||||||||| ||||| |
|
|
| T |
19248478 |
tatggattatgaaatttgaatggaatatgttatgtatggatgtttaaaagttgtaattt |
19248420 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 85 - 174
Target Start/End: Original strand, 38026224 - 38026312
Alignment:
| Q |
85 |
tggaatatgaaatttgaatggaatatgttatgtatggatatttaaaagttgaaattttttaggtaattaaaaatgtatttttctttgtac |
174 |
Q |
| |
|
|||| ||||||||| |||||||| |||||||||||| || ||||||||||| || ||| |||||||||||||| ||||||||||||||| |
|
|
| T |
38026224 |
tggattatgaaattagaatggaacatgttatgtatgaatgtttaaaagttg-aagtttataggtaattaaaaaaatatttttctttgtac |
38026312 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 30604001 - 30604100
Alignment:
| Q |
1 |
attatgtaagaattatatgcattatggtatgatgaatttgtttggaattgtgtaagaatcatggtttttgtttggattatggtatggaatatgaaatttg |
100 |
Q |
| |
|
||||||||||||| ||||| ||||| || |||||||||| ||| ||| || |||||||||| |||||| ||||||||||||||||| ||||||||||| |
|
|
| T |
30604001 |
attatgtaagaatcatatgtattatcctacgatgaatttgcttgagattatgcaagaatcatgatttttg-ttggattatggtatggattatgaaatttg |
30604099 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 158
Target Start/End: Original strand, 41349885 - 41350023
Alignment:
| Q |
13 |
ttatatgcattatggtatgatgaatttgtttggaattgtgtaagaatcatggtttttgtttggattatggtatggaatatgaaatttgaatggaatatgt |
112 |
Q |
| |
|
||||||| ||||||||||||||||||||| ||| ||| ||||||||||||| ||| |||||||||||| |||| |||||||| |||||| | | |
|
|
| T |
41349885 |
ttatatgaattatggtatgatgaatttgtatgg-attatgtaagaatcatgaatttcgtttggattatgatatgatttatgaaatgtgaatgaa-----t |
41349978 |
T |
 |
| Q |
113 |
tatgtatggatatttaaaagttgaaattttttaggtaattaaaaat |
158 |
Q |
| |
|
| ||||||||| | ||||| ||||| ||||||| |||||||||||| |
|
|
| T |
41349979 |
tgtgtatggatgtctaaaaattgaagtttttta-gtaattaaaaat |
41350023 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 16682564 - 16682643
Alignment:
| Q |
1 |
attatgtaagaattatatgcattatggtatgatgaatttgtttggaattgtgtaagaatcatggtttttgtttggattatg |
81 |
Q |
| |
|
||||||||||||| |||| |||||||||| ||||||||| |||| ||| |||||||||| | |||||| |||||||||| |
|
|
| T |
16682564 |
attatgtaagaatcatatctattatggtatcatgaatttgcttgggattatgtaagaatccttatttttg-ttggattatg |
16682643 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 17656800 - 17656879
Alignment:
| Q |
1 |
attatgtaagaattatatgcattatggtatgatgaatttgtttggaattgtgtaagaatcatggtttttgtttggattatg |
81 |
Q |
| |
|
||||||||||||| |||| |||||||||| ||||||||| |||| ||| |||||||||| | |||||| |||||||||| |
|
|
| T |
17656800 |
attatgtaagaatcatatctattatggtatcatgaatttgcttgggattatgtaagaatccttatttttg-ttggattatg |
17656879 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 112 - 157
Target Start/End: Original strand, 2455879 - 2455923
Alignment:
| Q |
112 |
ttatgtatggatatttaaaagttgaaattttttaggtaattaaaaa |
157 |
Q |
| |
|
|||||||||||| ||||||||||||| |||||| |||||||||||| |
|
|
| T |
2455879 |
ttatgtatggatgtttaaaagttgaagtttttt-ggtaattaaaaa |
2455923 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 685705 - 685872
Alignment:
| Q |
1 |
attatgtaagaattatatgcattatggtatgatgaatttgtttgg----aattgtgtaagaatcatggtttttgtttggattatggtatggaatatgaaa |
96 |
Q |
| |
|
||||||||||||| |||||||||| ||||||||||||||| |||| |||| ||||||||||||| ||||| || ||||||||||||| | ||||||| |
|
|
| T |
685705 |
attatgtaagaatcatatgcattacggtatgatgaatttgcttgggattaattatgtaagaatcatgatttttatt-ggattatggtatgaattatgaaa |
685803 |
T |
 |
| Q |
97 |
tttgaatggaatatgttatgtatggatatttaaaagttgaaattttttaggtaattaaaaatgtattttt |
166 |
Q |
| |
|
||||||||||||||||||||| ||||| | |||||| || || ||| |||||||||||||| |||||||| |
|
|
| T |
685804 |
tttgaatggaatatgttatgtgtggatctctaaaagctg-aagtttgtaggtaattaaaaaagtattttt |
685872 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 77; Significance: 8e-36; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 22792354 - 22792527
Alignment:
| Q |
1 |
attatgtaagaattatatgcat--tatggtatgatgaatttgtttggaattgtgtaagaatcatggtttttgtttggattatggtatggaatatgaaatt |
98 |
Q |
| |
|
||||||||||||| |||| ||| ||||||||||||||||||||||| ||||||||||||||||| | |||| || |||| ||||||| | ||| ||||| |
|
|
| T |
22792354 |
attatgtaagaatcatatacatattatggtatgatgaatttgtttgggattgtgtaagaatcatgatatttg-ttcgattttggtatgaagtataaaatt |
22792452 |
T |
 |
| Q |
99 |
tgaatggaatatgttatgtatggatatttaaaagttgaaattttttaggtaattaaaaatgtatttttctttgtac |
174 |
Q |
| |
|
|||||| ||||| ||||||| ||| ||||||||||| || ||| |||||||||||||| |||||||||||||||| |
|
|
| T |
22792453 |
tgaatgaaatataatatgtatcgatctttaaaagttg-aagtttgtaggtaattaaaaaagtatttttctttgtac |
22792527 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 52 - 170
Target Start/End: Original strand, 9597976 - 9598092
Alignment:
| Q |
52 |
gtaagaatcatggtttttgtttggattatggtatggaatatgaaatttgaatggaatatgttatgtatggatatttaaaagttgaaattttttaggtaat |
151 |
Q |
| |
|
|||||||||||| |||||||| || ||| |||||||| ||||||||||||||||||||| |||||||||||| |||||||||| || ||| ||||||| |
|
|
| T |
9597976 |
gtaagaatcatgatttttgtt-ggtttagggtatggattatgaaatttgaatggaatatattatgtatggatctttaaaagtt-taagtttgcaggtaat |
9598073 |
T |
 |
| Q |
152 |
taaaaatgtatttttcttt |
170 |
Q |
| |
|
|||||| |||||||||||| |
|
|
| T |
9598074 |
taaaaaagtatttttcttt |
9598092 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 20 - 137
Target Start/End: Complemental strand, 35796562 - 35796445
Alignment:
| Q |
20 |
cattatggtatgatgaatttgtttggaattgtgtaagaatcatggtttttgtttggattatggtatggaatatgaaatttgaatggaatatgt--tatgt |
117 |
Q |
| |
|
||||||||||||||||||||| ||| | || ||||||||||||| |||||||||| ||||||||||||| ||||||||||||||| ||||||| ||||| |
|
|
| T |
35796562 |
cattatggtatgatgaatttgcttg-acttatgtaagaatcatgatttttgtttg-attatggtatggattatgaaatttgaatgaaatatgttatatgt |
35796465 |
T |
 |
| Q |
118 |
atggatatttaaaagttgaa |
137 |
Q |
| |
|
||||| || |||||||||| |
|
|
| T |
35796464 |
ttggatcttcaaaagttgaa |
35796445 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 69; Significance: 5e-31; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 52833679 - 52833814
Alignment:
| Q |
1 |
attatgtaagaattatatgcattatggtatgatgaatttgtttggaattgtgtaagaatcatggtttttgtttggattatggtatggaatatgaaatttg |
100 |
Q |
| |
|
|||| |||||||| ||||||||||||||| |||||||||| |||| ||| || ||||||||| ||||| ||| ||||||||||| | ||||||||||| |
|
|
| T |
52833679 |
attaggtaagaatcatatgcattatggtaggatgaatttgcttgggattatgcaagaatcataatttttttttt-attatggtatgaattatgaaatttg |
52833777 |
T |
 |
| Q |
101 |
aatggaatatgttatgtatggatatttaaaagttgaa |
137 |
Q |
| |
|
|||||||||||||||| |||||| ||||||||||||| |
|
|
| T |
52833778 |
aatggaatatgttatgcatggatctttaaaagttgaa |
52833814 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 85 - 174
Target Start/End: Original strand, 15731166 - 15731254
Alignment:
| Q |
85 |
tggaatatgaaatttgaatggaatatgttatgtatggatatttaaaagttgaaattttttaggtaattaaaaatgtatttttctttgtac |
174 |
Q |
| |
|
|||| ||||||||| |||||||| ||||||||||||||| ||||||||||| || ||| |||||||||||||| ||||||||||||||| |
|
|
| T |
15731166 |
tggattatgaaattagaatggaacatgttatgtatggatgtttaaaagttg-aagtttgtaggtaattaaaaaaatatttttctttgtac |
15731254 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 52 - 170
Target Start/End: Original strand, 42595586 - 42595698
Alignment:
| Q |
52 |
gtaagaatcatggtttttgtttggattatggtat--ggaatatgaaatttgaatggaatatgttatgtatggatatttaaaagttgaaattttttaggta |
149 |
Q |
| |
|
|||||||||||| |||||||| |||||||||||| ||| ||||||||||||||| ||||||||| | |||| ||||||||||||| || || |
|
|
| T |
42595586 |
gtaagaatcatgatttttgtt-ggattatggtatatggattatgaaatttgaatgagatatgttattaacggatctttaaaagttgaagtt-------ta |
42595677 |
T |
 |
| Q |
150 |
attaaaaatgtatttttcttt |
170 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
42595678 |
attaaaaatgtatttttcttt |
42595698 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 398363 - 398296
Alignment:
| Q |
98 |
ttgaatggaatatgttatgtatggatatttaaaagttgaaattttttaggtaattaaaaatgtattttt |
166 |
Q |
| |
|
||||||||||||||||||||||||| ||||||| ||| || ||| ||||||||||||| |||||||| |
|
|
| T |
398363 |
ttgaatggaatatgttatgtatggaggtttaaaaattg-aagtttgcaggtaattaaaaaagtattttt |
398296 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 46075229 - 46075273
Alignment:
| Q |
1 |
attatgtaagaattatatgcattatggtatgatgaatttgtttgg |
45 |
Q |
| |
|
||||||||||||| ||||||||||||||| |||||||||| |||| |
|
|
| T |
46075229 |
attatgtaagaatcatatgcattatggtacgatgaatttgcttgg |
46075273 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 174
Target Start/End: Complemental strand, 49408176 - 49408120
Alignment:
| Q |
117 |
tatggatatttaaaagttgaaattttttaggtaattaaaaatgtatttttctttgtac |
174 |
Q |
| |
|
||||||| || |||||||||| ||| | ||||||||||||| |||||||||||||||| |
|
|
| T |
49408176 |
tatggatcttaaaaagttgaagtttgt-aggtaattaaaaaagtatttttctttgtac |
49408120 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 69; Significance: 5e-31; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 34288598 - 34288753
Alignment:
| Q |
2 |
ttatgtaagaattatatgcattatggtatgatgaatttgtttggaattgtgtaagaatcatggtttttgtttggattatggtatggaatatgaaatttga |
101 |
Q |
| |
|
||||||||||||||||||| |||||||||||||| |||| ||| ||||||||||||| |||||||| ||||||||||||| | |||||||||||| |
|
|
| T |
34288598 |
ttatgtaagaattatatgc------gtatgatgaatttgcttgggattatgtaagaatcatgatttttgtt-ggattatggtatgaactatgaaatttga |
34288690 |
T |
 |
| Q |
102 |
atggaatatgttatgtatggatatttaaaagttgaaattttttaggtaattaaaaatgtatttt |
165 |
Q |
| |
|
||| |||| |||||||||||| ||||||||||| || ||| ||| |||||||||| ||||||| |
|
|
| T |
34288691 |
atgagatatattatgtatggatctttaaaagttg-aagtttgtagataattaaaaaagtatttt |
34288753 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 30539845 - 30540022
Alignment:
| Q |
1 |
attatgtaagaattatatgcattatggtatgatgaatttgtttggaattgtgtaagaatcatggtttttgtttg-----gattatggtatggaatatgaa |
95 |
Q |
| |
|
||||||||||||| |||| ||||| |||||||||||||| |||| || |||||||||| | |||||||| | | |||||||||||| ||| || |
|
|
| T |
30539845 |
attatgtaagaatcatatctattatagtatgatgaatttgcttgggatcatgtaagaatcccgatttttgttggattatggttatggtatggattattaa |
30539944 |
T |
 |
| Q |
96 |
atttgaatggaatatgttatgtatggatatttaaaagttgaaattttttaggtaattaaaa-atgtatttttctttgta |
173 |
Q |
| |
|
||||||||||||| |||||||||||||| |||||||||| |||||| |||||||||||| || ||||||||||||| |
|
|
| T |
30539945 |
atttgaatggaatttgttatgtatggatcattaaaagttg-aattttgcaggtaattaaaagttgaatttttctttgta |
30540022 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 85 - 174
Target Start/End: Original strand, 44344537 - 44344625
Alignment:
| Q |
85 |
tggaatatgaaatttgaatggaatatgttatgtatggatatttaaaagttgaaattttttaggtaattaaaaatgtatttttctttgtac |
174 |
Q |
| |
|
|||| ||||||||| |||||||| ||||||||||||||| ||||||||||| || ||| || ||||||||||| ||||||||||||||| |
|
|
| T |
44344537 |
tggattatgaaattagaatggaacatgttatgtatggatgtttaaaagttg-aagtttgtatgtaattaaaaaaatatttttctttgtac |
44344625 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 34 - 131
Target Start/End: Original strand, 40874644 - 40874739
Alignment:
| Q |
34 |
gaatttgtttggaattgtgtaagaatcatggtttttgtttggattatggtatggaatatgaaatttgaatggaatatgttatgtatggatatttaaaa |
131 |
Q |
| |
|
|||||||| |||| || |||||||||| | |||||||| ||||||| ||||| | |||||||||| ||||||||||||||||||||||| ||||||| |
|
|
| T |
40874644 |
gaatttgtatgga-ttatgtaagaatcccgatttttgtt-ggattatagtatgaattatgaaatttaaatggaatatgttatgtatggatctttaaaa |
40874739 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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