View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17749_low_1 (Length: 677)

Name: NF17749_low_1
Description: NF17749
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17749_low_1
NF17749_low_1
[»] scaffold0251 (2 HSPs)
scaffold0251 (6-660)||(13564-14209)
scaffold0251 (20-660)||(21538-22156)
[»] chr6 (49 HSPs)
chr6 (6-660)||(18002674-18003316)
chr6 (6-660)||(23994355-23995000)
chr6 (30-660)||(26089194-26089812)
chr6 (30-654)||(18776612-18777217)
chr6 (172-660)||(18569880-18570356)
chr6 (30-341)||(15735244-15735551)
chr6 (6-302)||(13621164-13621456)
chr6 (11-660)||(25650672-25651314)
chr6 (456-653)||(15742408-15742604)
chr6 (20-116)||(16231499-16231595)
chr6 (20-116)||(18087375-18087471)
chr6 (20-116)||(23977376-23977472)
chr6 (11-140)||(13750587-13750715)
chr6 (13-140)||(18259485-18259612)
chr6 (30-140)||(24267475-24267585)
chr6 (6-87)||(16448139-16448220)
chr6 (404-503)||(19175156-19175256)
chr6 (13-116)||(8227066-8227169)
chr6 (30-140)||(5110023-5110133)
chr6 (13-116)||(23532222-23532325)
chr6 (584-653)||(22440936-22441004)
chr6 (30-127)||(29415880-29415977)
chr6 (548-660)||(18381853-18381964)
chr6 (593-660)||(18398948-18399015)
chr6 (6-93)||(24563048-24563135)
chr6 (439-503)||(21931244-21931309)
chr6 (548-653)||(35015342-35015446)
chr6 (588-660)||(31628273-31628345)
chr6 (6-116)||(5289406-5289517)
chr6 (34-88)||(33314792-33314846)
chr6 (34-95)||(10488316-10488377)
chr6 (34-95)||(16376951-16377012)
chr6 (34-95)||(16384275-16384336)
chr6 (555-627)||(18583307-18583377)
chr6 (548-653)||(19983476-19983580)
chr6 (47-116)||(24441306-24441375)
chr6 (547-655)||(29160478-29160585)
chr6 (593-660)||(18823566-18823633)
chr6 (593-660)||(18839421-18839488)
chr6 (404-486)||(19168853-19168936)
chr6 (593-652)||(32898800-32898859)
chr6 (34-88)||(16649956-16650010)
chr6 (595-653)||(25744390-25744448)
chr6 (434-503)||(31467739-31467808)
chr6 (404-449)||(7365861-7365906)
chr6 (34-95)||(19443390-19443451)
chr6 (36-125)||(28948208-28948297)
chr6 (404-503)||(16136288-16136387)
chr6 (596-660)||(18432656-18432720)
[»] chr3 (84 HSPs)
chr3 (6-660)||(53770473-53771118)
chr3 (6-660)||(16260894-16261530)
chr3 (6-660)||(23491806-23492450)
chr3 (31-660)||(2843651-2844268)
chr3 (6-660)||(38167343-38167991)
chr3 (20-660)||(3991999-3992627)
chr3 (6-660)||(17100085-17100730)
chr3 (6-553)||(8604442-8604982)
chr3 (14-660)||(54423453-54424089)
chr3 (6-660)||(11061176-11061823)
chr3 (11-542)||(13326640-13327182)
chr3 (6-394)||(51961398-51961783)
chr3 (11-553)||(11882308-11882860)
chr3 (405-660)||(19261009-19261261)
chr3 (404-653)||(45581453-45581701)
chr3 (404-653)||(54038309-54038557)
chr3 (404-627)||(28558028-28558250)
chr3 (483-660)||(17101237-17101415)
chr3 (20-116)||(18910600-18910696)
chr3 (17-149)||(14818700-14818832)
chr3 (13-140)||(29172162-29172289)
chr3 (30-128)||(45530930-45531028)
chr3 (13-140)||(13511677-13511804)
chr3 (30-105)||(20417787-20417862)
chr3 (6-140)||(10550908-10551042)
chr3 (6-140)||(36167135-36167269)
chr3 (182-239)||(9303504-9303561)
chr3 (13-140)||(12158894-12159020)
chr3 (6-247)||(15517258-15517499)
chr3 (13-116)||(37641832-37641935)
chr3 (574-660)||(17139500-17139585)
chr3 (6-140)||(21618986-21619120)
chr3 (555-660)||(14528182-14528286)
chr3 (588-660)||(11329131-11329203)
chr3 (588-660)||(12560406-12560478)
chr3 (6-140)||(12536256-12536391)
chr3 (13-116)||(22147094-22147197)
chr3 (13-116)||(24340279-24340382)
chr3 (6-128)||(34851623-34851745)
chr3 (547-660)||(12488896-12489008)
chr3 (547-660)||(14295403-14295515)
chr3 (547-660)||(55441019-55441131)
chr3 (13-80)||(52338323-52338390)
chr3 (584-653)||(12349907-12349975)
chr3 (585-653)||(6154508-6154575)
chr3 (6-93)||(13968156-13968243)
chr3 (6-93)||(13973631-13973718)
chr3 (593-660)||(16880133-16880200)
chr3 (6-140)||(17547779-17547914)
chr3 (6-116)||(23395349-23395460)
chr3 (404-486)||(40039089-40039172)
chr3 (410-503)||(15517644-15517736)
chr3 (555-660)||(19946672-19946775)
chr3 (34-95)||(19430553-19430614)
chr3 (6-140)||(11849904-11850039)
chr3 (555-653)||(33341855-33341951)
chr3 (593-660)||(38811178-38811245)
chr3 (593-660)||(50112221-50112288)
chr3 (30-128)||(20188356-20188454)
chr3 (64-169)||(52212711-52212817)
chr3 (34-95)||(1468317-1468378)
chr3 (547-660)||(14301030-14301142)
chr3 (548-653)||(17956169-17956273)
chr3 (34-95)||(28557666-28557727)
chr3 (34-95)||(37038681-37038742)
chr3 (34-95)||(54038856-54038917)
chr3 (593-653)||(22144449-22144509)
chr3 (588-660)||(35123701-35123773)
chr3 (555-653)||(7853956-7854052)
chr3 (34-125)||(9511245-9511336)
chr3 (34-125)||(9519220-9519311)
chr3 (593-660)||(14059383-14059450)
chr3 (34-125)||(40039441-40039532)
chr3 (34-88)||(12808870-12808924)
chr3 (595-653)||(13817527-13817585)
chr3 (34-88)||(18366874-18366928)
chr3 (547-653)||(30152907-30153012)
chr3 (585-650)||(6146926-6146990)
chr3 (594-655)||(8631801-8631862)
chr3 (34-95)||(16934559-16934620)
chr3 (562-655)||(47784922-47785014)
chr3 (588-660)||(14298426-14298498)
chr3 (588-660)||(14304053-14304125)
chr3 (588-660)||(15876073-15876145)
[»] chr2 (50 HSPs)
chr2 (6-660)||(21274227-21274870)
chr2 (14-653)||(36890862-36891490)
chr2 (30-660)||(9653074-9653683)
chr2 (6-553)||(19659480-19660037)
chr2 (174-653)||(25876096-25876565)
chr2 (231-660)||(23830854-23831277)
chr2 (231-660)||(23821775-23822198)
chr2 (404-578)||(16935417-16935591)
chr2 (404-578)||(17006077-17006251)
chr2 (20-116)||(12642195-12642291)
chr2 (20-114)||(3799158-3799252)
chr2 (30-191)||(23822191-23822352)
chr2 (30-191)||(23831270-23831431)
chr2 (20-116)||(42178514-42178610)
chr2 (20-116)||(12636421-12636517)
chr2 (11-140)||(19358496-19358625)
chr2 (20-116)||(8943453-8943549)
chr2 (547-660)||(28974014-28974126)
chr2 (11-140)||(6477544-6477674)
chr2 (30-140)||(22703605-22703715)
chr2 (34-140)||(34877461-34877567)
chr2 (548-660)||(32465824-32465935)
chr2 (34-125)||(16935056-16935147)
chr2 (34-125)||(17005716-17005807)
chr2 (6-93)||(27366907-27366994)
chr2 (30-140)||(24087880-24087990)
chr2 (555-660)||(24571462-24571565)
chr2 (30-95)||(45617964-45618029)
chr2 (588-660)||(4448303-4448375)
chr2 (588-660)||(22580029-22580101)
chr2 (548-660)||(25601990-25602101)
chr2 (588-660)||(27261811-27261883)
chr2 (593-660)||(19669279-19669346)
chr2 (438-503)||(24087529-24087594)
chr2 (547-660)||(67957-68069)
chr2 (34-95)||(11231916-11231977)
chr2 (34-95)||(12728007-12728068)
chr2 (555-660)||(19666501-19666605)
chr2 (404-500)||(20279435-20279532)
chr2 (34-95)||(22513763-22513824)
chr2 (588-660)||(271175-271247)
chr2 (547-655)||(6094681-6094788)
chr2 (593-660)||(3411-3478)
chr2 (404-486)||(45617580-45617663)
chr2 (34-88)||(24686366-24686420)
chr2 (34-88)||(28349800-28349854)
chr2 (34-88)||(28776392-28776446)
chr2 (34-95)||(34824066-34824127)
chr2 (555-655)||(9636718-9636817)
chr2 (588-660)||(24294693-24294765)
[»] chr5 (39 HSPs)
chr5 (6-653)||(21204360-21204996)
chr5 (14-660)||(20711518-20712153)
chr5 (12-660)||(21650138-21650772)
chr5 (12-385)||(21109334-21109706)
chr5 (6-155)||(22111577-22111726)
chr5 (20-116)||(9730937-9731033)
chr5 (6-145)||(8952344-8952483)
chr5 (6-140)||(18318516-18318650)
chr5 (6-140)||(20765565-20765699)
chr5 (13-116)||(40726303-40726406)
chr5 (542-660)||(23493879-23493996)
chr5 (12-93)||(22007244-22007325)
chr5 (32-128)||(21311223-21311319)
chr5 (554-653)||(2031782-2031880)
chr5 (574-660)||(1168374-1168459)
chr5 (588-660)||(23466462-23466534)
chr5 (30-140)||(22777378-22777488)
chr5 (593-650)||(21906730-21906787)
chr5 (32-116)||(21297692-21297776)
chr5 (593-653)||(21397099-21397159)
chr5 (165-235)||(432225-432294)
chr5 (30-140)||(10817440-10817550)
chr5 (465-499)||(14342364-14342398)
chr5 (588-638)||(19405542-19405592)
chr5 (6-95)||(22357256-22357346)
chr5 (30-140)||(23539396-23539506)
chr5 (34-93)||(1220098-1220157)
chr5 (593-660)||(7728430-7728497)
chr5 (34-93)||(10778546-10778605)
chr5 (34-88)||(22883669-22883723)
chr5 (547-581)||(23234733-23234767)
chr5 (595-653)||(24475595-24475653)
chr5 (34-88)||(35581652-35581706)
chr5 (34-88)||(36990356-36990410)
chr5 (34-95)||(21399159-21399220)
chr5 (34-95)||(21932959-21933020)
chr5 (34-95)||(21939129-21939190)
chr5 (43-95)||(23514187-23514239)
chr5 (163-235)||(23981931-23982002)
[»] chr8 (46 HSPs)
chr8 (12-660)||(24385921-24386560)
chr8 (6-660)||(16039059-16039703)
chr8 (12-660)||(273879-274520)
chr8 (12-660)||(641329-641970)
chr8 (12-660)||(827135-827776)
chr8 (32-660)||(20481062-20481682)
chr8 (404-653)||(39115098-39115345)
chr8 (20-116)||(13721481-13721577)
chr8 (20-116)||(16873604-16873700)
chr8 (6-140)||(23889410-23889544)
chr8 (6-140)||(22583968-22584102)
chr8 (20-116)||(3431835-3431931)
chr8 (11-117)||(5080825-5080931)
chr8 (13-140)||(34302161-34302288)
chr8 (6-140)||(26220156-26220290)
chr8 (30-140)||(23451100-23451210)
chr8 (11-140)||(26222595-26222724)
chr8 (548-660)||(41246624-41246735)
chr8 (551-653)||(41506994-41507095)
chr8 (36-145)||(24496237-24496346)
chr8 (584-660)||(25122538-25122613)
chr8 (13-140)||(3273499-3273626)
chr8 (404-486)||(17502169-17502252)
chr8 (596-660)||(39446936-39447000)
chr8 (562-660)||(21680982-21681079)
chr8 (588-660)||(20573362-20573434)
chr8 (548-660)||(23837164-23837275)
chr8 (588-660)||(38533654-38533726)
chr8 (6-116)||(17611623-17611734)
chr8 (588-655)||(20567333-20567400)
chr8 (588-655)||(20573526-20573593)
chr8 (65-140)||(24979780-24979855)
chr8 (6-93)||(30766267-30766354)
chr8 (562-653)||(37611648-37611738)
chr8 (34-95)||(643921-643982)
chr8 (34-95)||(13662842-13662903)
chr8 (555-660)||(23226246-23226350)
chr8 (34-125)||(17501807-17501898)
chr8 (560-655)||(38635823-38635917)
chr8 (34-88)||(271946-272000)
chr8 (34-88)||(829655-829709)
chr8 (555-617)||(24717083-24717144)
chr8 (34-95)||(4233523-4233584)
chr8 (588-660)||(20647999-20648071)
chr8 (588-660)||(20654075-20654147)
chr8 (439-486)||(24239655-24239703)
[»] chr7 (61 HSPs)
chr7 (6-660)||(42056467-42057112)
chr7 (11-660)||(2028359-2028998)
chr7 (6-660)||(2190364-2190998)
chr7 (14-660)||(3894477-3895102)
chr7 (14-660)||(26070434-26071070)
chr7 (14-660)||(26094221-26094857)
chr7 (6-660)||(3049019-3049660)
chr7 (6-454)||(15524949-15525388)
chr7 (14-653)||(111454-112081)
chr7 (30-484)||(13866110-13866553)
chr7 (412-653)||(32494231-32494471)
chr7 (311-655)||(12370015-12370350)
chr7 (6-252)||(25123890-25124124)
chr7 (20-116)||(370694-370790)
chr7 (20-116)||(13757977-13758073)
chr7 (6-140)||(11054316-11054450)
chr7 (20-116)||(14251451-14251547)
chr7 (6-137)||(37784671-37784802)
chr7 (20-116)||(18980573-18980669)
chr7 (481-581)||(13863178-13863279)
chr7 (20-116)||(15927174-15927271)
chr7 (574-660)||(16570176-16570261)
chr7 (574-660)||(16595401-16595486)
chr7 (555-660)||(12248291-12248395)
chr7 (547-655)||(11287382-11287489)
chr7 (13-116)||(19486300-19486403)
chr7 (575-660)||(49047844-49047928)
chr7 (6-128)||(17467707-17467830)
chr7 (6-128)||(17585384-17585507)
chr7 (574-660)||(13274779-13274864)
chr7 (404-485)||(28722115-28722197)
chr7 (30-140)||(48274111-48274221)
chr7 (30-87)||(10063244-10063301)
chr7 (6-93)||(4280729-4280816)
chr7 (6-140)||(13256297-13256432)
chr7 (6-116)||(21734756-21734866)
chr7 (213-315)||(12372948-12373045)
chr7 (547-660)||(13377494-13377606)
chr7 (555-660)||(17224108-17224212)
chr7 (34-125)||(28720332-28720423)
chr7 (6-128)||(37380485-37380608)
chr7 (555-660)||(7284230-7284333)
chr7 (34-95)||(7822345-7822406)
chr7 (34-95)||(7829656-7829717)
chr7 (34-95)||(27102215-27102276)
chr7 (34-95)||(27109563-27109624)
chr7 (34-95)||(27176050-27176111)
chr7 (34-95)||(38784307-38784368)
chr7 (547-655)||(17947767-17947874)
chr7 (584-651)||(143647-143713)
chr7 (6-140)||(3289070-3289205)
chr7 (593-660)||(15822601-15822668)
chr7 (34-93)||(32494782-32494841)
chr7 (42-116)||(21734196-21734270)
chr7 (595-653)||(39046800-39046858)
chr7 (548-617)||(1937221-1937289)
chr7 (596-653)||(12759000-12759057)
chr7 (34-99)||(16383378-16383443)
chr7 (34-99)||(29004704-29004769)
chr7 (584-653)||(44865229-44865297)
chr7 (588-652)||(45452344-45452408)
[»] scaffold0175 (2 HSPs)
scaffold0175 (12-660)||(14392-15026)
scaffold0175 (16-140)||(18463-18587)
[»] chr4 (55 HSPs)
chr4 (6-660)||(15272490-15273123)
chr4 (14-660)||(30232666-30233323)
chr4 (135-660)||(12837370-12837883)
chr4 (6-660)||(52265678-52266343)
chr4 (6-581)||(15851604-15852178)
chr4 (11-155)||(26921763-26921907)
chr4 (20-116)||(20000330-20000426)
chr4 (20-116)||(7132618-7132714)
chr4 (30-140)||(4830469-4830579)
chr4 (30-140)||(4833764-4833874)
chr4 (6-140)||(14280854-14280988)
chr4 (547-650)||(18494508-18494610)
chr4 (11-145)||(4615358-4615492)
chr4 (30-140)||(54798218-54798328)
chr4 (13-86)||(20899112-20899185)
chr4 (548-617)||(25119428-25119497)
chr4 (13-140)||(27028362-27028486)
chr4 (596-660)||(27960984-27961048)
chr4 (548-660)||(34395223-34395334)
chr4 (6-140)||(2584456-2584591)
chr4 (13-116)||(15373944-15374047)
chr4 (30-93)||(16157425-16157488)
chr4 (13-116)||(22354291-22354394)
chr4 (593-660)||(23270104-23270171)
chr4 (584-653)||(820090-820158)
chr4 (547-660)||(15044793-15044905)
chr4 (548-660)||(16732135-16732246)
chr4 (548-660)||(21959633-21959744)
chr4 (34-125)||(5683073-5683164)
chr4 (593-660)||(13809680-13809747)
chr4 (404-486)||(15213783-15213866)
chr4 (41-116)||(15368171-15368246)
chr4 (13-116)||(16223992-16224095)
chr4 (574-653)||(55376774-55376852)
chr4 (50-140)||(6512273-6512363)
chr4 (6-140)||(14931435-14931569)
chr4 (547-660)||(15109519-15109631)
chr4 (6-140)||(13447135-13447270)
chr4 (34-116)||(15214144-15214226)
chr4 (6-71)||(8574316-8574381)
chr4 (34-95)||(18293436-18293497)
chr4 (584-653)||(30457905-30457973)
chr4 (548-660)||(44055881-44055992)
chr4 (41-116)||(15403184-15403258)
chr4 (404-486)||(17375454-17375536)
chr4 (595-653)||(44346839-44346897)
chr4 (595-653)||(53704910-53704968)
chr4 (38-116)||(54363816-54363894)
chr4 (547-616)||(14951727-14951795)
chr4 (13-70)||(15371663-15371720)
chr4 (438-486)||(19622341-19622390)
chr4 (548-612)||(5682753-5682816)
chr4 (206-262)||(5682936-5682991)
chr4 (588-660)||(19821946-19822018)
chr4 (588-660)||(45459025-45459097)
[»] scaffold0574 (1 HSPs)
scaffold0574 (30-660)||(9685-10305)
[»] scaffold0004 (6 HSPs)
scaffold0004 (76-660)||(186703-187281)
scaffold0004 (263-660)||(193665-194057)
scaffold0004 (6-116)||(60032-60143)
scaffold0004 (6-140)||(75395-75530)
scaffold0004 (30-80)||(187612-187662)
scaffold0004 (30-127)||(72570-72667)
[»] scaffold0706 (1 HSPs)
scaffold0706 (6-660)||(6721-7361)
[»] scaffold0037 (5 HSPs)
scaffold0037 (33-660)||(94435-95052)
scaffold0037 (180-660)||(24898-25363)
scaffold0037 (6-140)||(113281-113415)
scaffold0037 (6-140)||(118115-118249)
scaffold0037 (15-87)||(25433-25505)
[»] scaffold0244 (1 HSPs)
scaffold0244 (30-641)||(22701-23302)
[»] scaffold0032 (1 HSPs)
scaffold0032 (30-660)||(55038-55658)
[»] scaffold0597 (1 HSPs)
scaffold0597 (20-660)||(1156-1786)
[»] chr1 (36 HSPs)
chr1 (14-660)||(27329925-27330558)
chr1 (6-309)||(20825274-20825573)
chr1 (447-660)||(35054621-35054833)
chr1 (405-653)||(21859834-21860081)
chr1 (14-394)||(35054221-35054598)
chr1 (6-140)||(51476596-51476730)
chr1 (6-140)||(52983831-52983965)
chr1 (20-116)||(17148175-17148271)
chr1 (13-145)||(18824232-18824364)
chr1 (6-140)||(13528022-13528157)
chr1 (6-116)||(18270929-18271040)
chr1 (6-116)||(18275583-18275694)
chr1 (13-116)||(21473404-21473507)
chr1 (555-660)||(51627834-51627938)
chr1 (6-116)||(7320930-7321041)
chr1 (548-660)||(13377010-13377121)
chr1 (584-653)||(22403287-22403355)
chr1 (548-660)||(20177141-20177252)
chr1 (588-660)||(35522489-35522561)
chr1 (6-116)||(20058088-20058199)
chr1 (593-660)||(21718238-21718305)
chr1 (593-660)||(49967660-49967727)
chr1 (34-125)||(51324137-51324228)
chr1 (163-235)||(18853120-18853191)
chr1 (34-90)||(38055673-38055729)
chr1 (34-88)||(17004254-17004308)
chr1 (34-88)||(18060343-18060397)
chr1 (34-116)||(21239382-21239464)
chr1 (547-653)||(22366984-22367089)
chr1 (587-649)||(27674800-27674862)
chr1 (595-653)||(41212081-41212139)
chr1 (34-95)||(21858910-21858971)
chr1 (555-660)||(22143531-22143635)
chr1 (555-616)||(44035192-44035252)
chr1 (34-95)||(44035549-44035610)
chr1 (588-660)||(9784270-9784342)
[»] scaffold0025 (1 HSPs)
scaffold0025 (6-660)||(146031-146678)
[»] scaffold0234 (1 HSPs)
scaffold0234 (6-660)||(17582-18214)
[»] scaffold0021 (4 HSPs)
scaffold0021 (14-660)||(87737-88352)
scaffold0021 (30-140)||(147253-147363)
scaffold0021 (548-660)||(132420-132531)
scaffold0021 (555-660)||(11660-11764)
[»] scaffold0303 (1 HSPs)
scaffold0303 (6-660)||(206-822)
[»] scaffold0465 (1 HSPs)
scaffold0465 (19-660)||(10144-10773)
[»] scaffold0342 (2 HSPs)
scaffold0342 (6-660)||(5373-6017)
scaffold0342 (549-617)||(672-739)
[»] scaffold0447 (2 HSPs)
scaffold0447 (30-660)||(4024-4640)
scaffold0447 (30-660)||(8638-9254)
[»] scaffold0383 (1 HSPs)
scaffold0383 (30-655)||(6632-7243)
[»] scaffold0077 (1 HSPs)
scaffold0077 (404-653)||(15651-15899)
[»] scaffold0003 (2 HSPs)
scaffold0003 (135-620)||(147095-147590)
scaffold0003 (6-90)||(147003-147088)
[»] scaffold0039 (3 HSPs)
scaffold0039 (404-653)||(19086-19334)
scaffold0039 (547-653)||(12705-12810)
scaffold0039 (34-95)||(19635-19696)
[»] scaffold0034 (4 HSPs)
scaffold0034 (404-653)||(79683-79934)
scaffold0034 (435-660)||(46016-46242)
scaffold0034 (476-660)||(40552-40735)
scaffold0034 (34-99)||(79321-79386)
[»] scaffold0047 (3 HSPs)
scaffold0047 (6-157)||(76793-76944)
scaffold0047 (404-499)||(20286-20382)
scaffold0047 (177-302)||(76938-77058)
[»] scaffold0103 (1 HSPs)
scaffold0103 (404-660)||(33485-33739)
[»] scaffold0261 (1 HSPs)
scaffold0261 (11-155)||(6675-6819)
[»] scaffold2046 (1 HSPs)
scaffold2046 (11-140)||(801-929)
[»] scaffold0521 (2 HSPs)
scaffold0521 (458-578)||(10970-11090)
scaffold0521 (34-87)||(8388-8441)
[»] scaffold0453 (1 HSPs)
scaffold0453 (6-149)||(3721-3864)
[»] scaffold0377 (1 HSPs)
scaffold0377 (13-140)||(16413-16540)
[»] scaffold0181 (1 HSPs)
scaffold0181 (6-140)||(25830-25964)
[»] scaffold0429 (1 HSPs)
scaffold0429 (6-145)||(2304-2443)
[»] scaffold0589 (1 HSPs)
scaffold0589 (574-660)||(7826-7911)
[»] scaffold0720 (1 HSPs)
scaffold0720 (13-140)||(753-880)
[»] scaffold0247 (1 HSPs)
scaffold0247 (13-116)||(17584-17686)
[»] scaffold0149 (1 HSPs)
scaffold0149 (13-140)||(35852-35979)
[»] scaffold0117 (1 HSPs)
scaffold0117 (13-116)||(40547-40650)
[»] scaffold0107 (2 HSPs)
scaffold0107 (13-140)||(3505-3632)
scaffold0107 (34-88)||(30926-30980)
[»] scaffold0017 (3 HSPs)
scaffold0017 (13-128)||(837-952)
scaffold0017 (13-128)||(7587-7702)
scaffold0017 (34-125)||(26374-26465)
[»] scaffold0962 (1 HSPs)
scaffold0962 (30-140)||(925-1035)
[»] scaffold0092 (1 HSPs)
scaffold0092 (574-660)||(3311-3396)
[»] scaffold0008 (2 HSPs)
scaffold0008 (6-140)||(72262-72396)
scaffold0008 (593-660)||(22701-22768)
[»] scaffold0490 (1 HSPs)
scaffold0490 (6-95)||(5489-5578)
[»] scaffold0480 (2 HSPs)
scaffold0480 (574-660)||(9052-9137)
scaffold0480 (547-660)||(5416-5528)
[»] scaffold0309 (2 HSPs)
scaffold0309 (6-95)||(8744-8833)
scaffold0309 (6-81)||(6592-6667)
[»] scaffold0116 (1 HSPs)
scaffold0116 (548-653)||(30057-30161)
[»] scaffold0035 (2 HSPs)
scaffold0035 (547-660)||(109632-109744)
scaffold0035 (547-655)||(118138-118245)
[»] scaffold0338 (1 HSPs)
scaffold0338 (547-655)||(8952-9059)
[»] scaffold0022 (3 HSPs)
scaffold0022 (588-655)||(109595-109662)
scaffold0022 (30-140)||(117057-117167)
scaffold0022 (574-654)||(112721-112797)
[»] scaffold0014 (2 HSPs)
scaffold0014 (547-660)||(159267-159376)
scaffold0014 (574-660)||(85324-85409)
[»] scaffold1867 (1 HSPs)
scaffold1867 (555-660)||(118-221)
[»] scaffold0833 (1 HSPs)
scaffold0833 (555-660)||(3273-3376)
[»] scaffold0123 (2 HSPs)
scaffold0123 (6-116)||(1602-1712)
scaffold0123 (34-116)||(6908-6990)
[»] scaffold0970 (1 HSPs)
scaffold0970 (547-660)||(2420-2532)
[»] scaffold0610 (1 HSPs)
scaffold0610 (547-660)||(746-858)
[»] scaffold0240 (1 HSPs)
scaffold0240 (595-660)||(7581-7646)
[»] scaffold0120 (2 HSPs)
scaffold0120 (555-660)||(31184-31288)
scaffold0120 (555-655)||(21485-21584)
[»] scaffold0371 (1 HSPs)
scaffold0371 (32-116)||(3508-3592)
[»] scaffold0095 (1 HSPs)
scaffold0095 (596-660)||(33898-33962)
[»] scaffold1204 (1 HSPs)
scaffold1204 (404-486)||(250-333)
[»] scaffold0122 (1 HSPs)
scaffold0122 (554-653)||(24374-24472)
[»] scaffold0174 (1 HSPs)
scaffold0174 (6-95)||(16012-16102)
[»] scaffold0125 (1 HSPs)
scaffold0125 (34-116)||(28182-28264)
[»] scaffold0554 (1 HSPs)
scaffold0554 (547-660)||(1881-1993)
[»] scaffold0243 (1 HSPs)
scaffold0243 (547-660)||(2486-2598)
[»] scaffold0195 (1 HSPs)
scaffold0195 (547-660)||(688-800)
[»] scaffold0184 (1 HSPs)
scaffold0184 (548-653)||(31465-31569)
[»] scaffold0078 (1 HSPs)
scaffold0078 (548-653)||(41275-41379)
[»] scaffold0012 (1 HSPs)
scaffold0012 (548-653)||(253166-253270)
[»] scaffold0160 (2 HSPs)
scaffold0160 (551-655)||(3488-3591)
scaffold0160 (562-660)||(1-98)
[»] scaffold0409 (2 HSPs)
scaffold0409 (404-486)||(1505-1588)
scaffold0409 (404-486)||(9760-9843)
[»] scaffold0331 (1 HSPs)
scaffold0331 (13-80)||(4319-4386)
[»] scaffold0001 (2 HSPs)
scaffold0001 (548-655)||(70797-70903)
scaffold0001 (588-660)||(60811-60883)
[»] scaffold0359 (2 HSPs)
scaffold0359 (574-660)||(1309-1394)
scaffold0359 (584-653)||(11828-11896)
[»] scaffold0273 (1 HSPs)
scaffold0273 (30-140)||(7308-7418)
[»] scaffold1164 (1 HSPs)
scaffold1164 (547-660)||(1346-1458)
[»] scaffold0686 (2 HSPs)
scaffold0686 (548-653)||(6268-6372)
scaffold0686 (34-88)||(6667-6721)
[»] scaffold0673 (2 HSPs)
scaffold0673 (548-653)||(999-1103)
scaffold0673 (595-653)||(7025-7083)
[»] scaffold0076 (1 HSPs)
scaffold0076 (34-95)||(38720-38781)
[»] scaffold0670 (1 HSPs)
scaffold0670 (547-655)||(7850-7957)
[»] scaffold0452 (2 HSPs)
scaffold0452 (435-486)||(2945-2997)
scaffold0452 (34-95)||(3331-3392)
[»] scaffold0190 (1 HSPs)
scaffold0190 (588-660)||(9942-10014)
[»] scaffold0075 (1 HSPs)
scaffold0075 (548-660)||(4907-5018)
[»] scaffold0053 (1 HSPs)
scaffold0053 (548-660)||(77017-77128)
[»] scaffold0016 (4 HSPs)
scaffold0016 (548-616)||(162401-162468)
scaffold0016 (595-653)||(164227-164285)
scaffold0016 (548-617)||(166478-166546)
scaffold0016 (34-95)||(166820-166881)
[»] scaffold0011 (2 HSPs)
scaffold0011 (548-660)||(254984-255095)
scaffold0011 (548-660)||(261590-261701)
[»] scaffold1957 (1 HSPs)
scaffold1957 (33-140)||(125-232)
[»] scaffold0396 (1 HSPs)
scaffold0396 (593-660)||(11878-11945)
[»] scaffold0310 (1 HSPs)
scaffold0310 (593-660)||(284-351)
[»] scaffold0158 (1 HSPs)
scaffold0158 (555-653)||(24933-25028)
[»] scaffold0028 (1 HSPs)
scaffold0028 (593-660)||(79549-79616)
[»] scaffold0023 (1 HSPs)
scaffold0023 (34-93)||(154586-154645)
[»] scaffold0083 (2 HSPs)
scaffold0083 (595-653)||(14229-14287)
scaffold0083 (595-653)||(14889-14947)
[»] scaffold0042 (1 HSPs)
scaffold0042 (34-88)||(51841-51895)
[»] scaffold0031 (1 HSPs)
scaffold0031 (593-655)||(31054-31116)
[»] scaffold0269 (1 HSPs)
scaffold0269 (34-95)||(16077-16138)
[»] scaffold0091 (2 HSPs)
scaffold0091 (600-653)||(32220-32273)
scaffold0091 (600-653)||(42030-42083)
[»] scaffold0068 (2 HSPs)
scaffold0068 (584-648)||(48149-48212)
scaffold0068 (584-648)||(61597-61660)
[»] scaffold0013 (1 HSPs)
scaffold0013 (588-660)||(35483-35555)


Alignment Details
Target: scaffold0251 (Bit Score: 488; Significance: 0; HSPs: 2)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 488; E-Value: 0
Query Start/End: Original strand, 6 - 660
Target Start/End: Complemental strand, 14209 - 13564
Alignment:
Q  6 gacatcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagc 105  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| |||||    
T  14209 gacaacatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcgcctacatgctcctaacacttagc 14110  T
Q  106 agtatcataatgcacagaaaaatcccagtttcaacaacctcaaattcattttacaagcctcacacaaacactcattttccaaaacggttaacaaatgaat 205  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  14109 actatcataatgcacagaaaaatcccagtttcaacaacctcaaattcattttacaaacctcacacaaacactcattttccaaaacggttaacaaatgaat 14010  T
Q  206 tttcaaacgaaactcccgttttctcccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaaccac 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||     ||||||||| |||||||||||||||||||||||||||||||||    
T  14009 tttcaaacgaaactcccgttttctcccaaaacgactcgactatcataaccac----aacataaaaacagaaattccatcaagtttaactcatccaaccac 13914  T
Q  306 ataggcaactcaatcaacaactttgtatatcaaatttca-ttttggtgcttcacatgaccatctagcacaattttaccaatacaaacaacnnnnnnnnnc 404  Q
    |||| ||||||| |||||||||||||||||||||||||| ||| ||| |||||| ||| |||||||||||| || |||||||||||||||              
T  13913 atagacaactcagtcaacaactttgtatatcaaatttcactttgggttcttcacttgaacatctagcacaacttcaccaatacaaacaacttat------ 13820  T
Q  405 ttcataaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacac 504  Q
    ||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13819 ttcataaaatggaatactcatgatatcattcaagaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacac 13720  T
Q  505 aatatccaaatccaacaattgagtaaaactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgca 604  Q
    ||||||| ||||||||||||||| ||||| ||||||||  | ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  13719 aatatcccaatccaacaattgagcaaaacacataagtatccattttcaccaaaccaacaacaacaacttatttcacaacaacaaaattatgaatcatgca 13620  T
Q  605 tacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13619 tacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 13564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251; HSP #2
Raw Score: 393; E-Value: 0
Query Start/End: Original strand, 20 - 660
Target Start/End: Complemental strand, 22156 - 21538
Alignment:
Q  20 ttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataatgca 119  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||            ||||||||||||||||| || ||| ||||||||||||    
T  22156 ttcaacttctacgttttcgcgcataaaaatcaaaccgttaatccgttttcg------------cctacatgctcctaacatttggcactatcataatgca 22069  T
Q  120 cagaaaaatcccagtttcaacaacctcaaattcattttacaagcctcacacaaacactcattttccaaaacggttaacaaatgaattttcaaacgaaact 219  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  22068 cagaaaaatcccagtttcaacaaactcaaattcattttacaaacctcacacaaacactcattttccaaaacggttaacaaatgaattttcaaatgaaact 21969  T
Q  220 cccgttttctcccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaaccacataggcaactcaat 319  Q
    ||||||||||| | |||||||| ||||||||||||||| ||||||    ||||||||||||||||||||||||||||||||||||||||| ||||||| |    
T  21968 cccgttttctctc-aaacgactagactatcataaccacaacatac----aaatagaaattccatcaagtttaactcatccaaccacatagacaactcagt 21874  T
Q  320 caacaactttgtatatcaaatttca-ttttggtgcttcacatgaccatctagcacaattttaccaatacaaacaacnnnnnnnnncttcataaaatggaa 418  Q
    ||||| ||||||||||||||||||| ||| ||| |||||| ||| |||||||||||| || |||||||||||||||          ||||||||||||||    
T  21873 caacatctttgtatatcaaatttcactttgggttcttcacttgaacatctagcacaacttcaccaatacaaacaacttat------ttcataaaatggaa 21780  T
Q  419 tatccatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacacaatatccaaatcca 518  Q
    ||  ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  21779 tactcatgatatcattcaacaacaacaacatatctacttcaacaacatttcatgtagacatgaattcaaccataattcaacaacacaatatcccaatcca 21680  T
Q  519 acaattgagtaaaactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatga 618  Q
    ||||||||| |||||  |||| ||  | ||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  21679 acaattgagcaaaacatataattatccattttcaccaaactaacaacaacaacttatttcacaacaacaaaattatgaatcatgcatacccaagccatga 21580  T
Q  619 attagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  21579 attagcattcataacatcacttaacaacaacaacatctattg 21538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 468; Significance: 0; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 468; E-Value: 0
Query Start/End: Original strand, 6 - 660
Target Start/End: Complemental strand, 18003316 - 18002674
Alignment:
Q  6 gacatcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagc 105  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||| |||||    
T  18003316 gacagcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaattcgttttcgatgccgttttcacctacatgctccttacacttagc 18003217  T
Q  106 agtatcataatgcacagaaaaatcccagtttcaacaacctcaaattcattttacaagcctcacacaaacactcattttccaaaacggttaacaaatgaat 205  Q
    | ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  18003216 actatcataatgcacagaaaaatcccaatttcaacaacctcaaattcattttgcaagcctcacacaaacactcattttccaaaacggttaacaaatgaat 18003117  T
Q  206 tttcaaacgaaactcccgttttctcccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaaccac 305  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| ||||     |||||||||||||||||||||||||||||||||||||||||||    
T  18003116 tttcaaacaaaactcccgttttctcccaaaacgactcgactatcatatccac----aacataaaaatagaaattccatcaagtttaactcatccaaccac 18003021  T
Q  306 ataggcaactcaatcaacaactttgtatatcaaatttcattttggtgcttcacatgaccatctagcacaattttaccaatacaaacaacnnnnnnnnnct 405  Q
    |||||||||||| |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| || |||||||||||||||          |    
T  18003020 ataggcaactcagtcaacaactttgtatatcaaatttcactttggtccttcacatgaccatctagcacaacttcaccaatacaaacaacttat------t 18002927  T
Q  406 tcataaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacaca 505  Q
    | ||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  18002926 ttataaaatggaatacccatgataacattcaataacaacaacatatctacttcaacaacaattcatttagacatgaattcaaccataattcaacaacaca 18002827  T
Q  506 atatccaaatccaacaattgagtaaaactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcat 605  Q
    |||||| ||||||| ||||||| ||||| |||||||| || ||||||| |||||||||||||||| |||||||||||||||  || ||||||||||||||    
T  18002826 atatcccaatccaataattgagcaaaacacataagtattcattttcaccaaaccaacaacaacaacttatttcacaacaac--aagtatgaatcatgcat 18002729  T
Q  606 acccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  18002728 acccaagccatgaattagcatccataacgtcacttaacaacaacaacatctattg 18002674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 428; E-Value: 0
Query Start/End: Original strand, 6 - 660
Target Start/End: Original strand, 23994355 - 23995000
Alignment:
Q  6 gacatcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagc 105  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||| |||||    
T  23994355 gacaacatcagattttcaacttctacgttttcgcgcataaaaatcaaactgttaatccgttttcgatgccgttttcgcctacatgctcctaacacttagc 23994454  T
Q  106 agtatcataatgcacagaaaaatcccagtttcaacaacctcaaattcattttacaagcctcacacaaacactcattttccaaaacggttaacaaatgaat 205  Q
    | ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||    
T  23994455 actatcataatgcacagaaaaatcccagttttaacaacctcaaattcattttacaaacctcacacaaacactcactttccaaaacggttaacaattgaat 23994554  T
Q  206 tttcaaacgaaactcccgttttctcccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaaccac 305  Q
    |||||||||||||||||||||||| ||||||||||||||||| | ||||||      ||||||||| | |||||||| |||||||||||||||||| |||    
T  23994555 tttcaaacgaaactcccgttttcttccaaaacgactcgactaacgtaacca----taacataaaaacataaattccaccaagtttaactcatccaatcac 23994650  T
Q  306 ataggcaactcaatcaacaactttgtatatcaaatttca-ttttggtgcttcacatgaccatctagcacaattttaccaatacaaacaacnnnnnnnnnc 404  Q
    |||| ||||||| |||||||||||||||||||||||||| ||| ||| |||||| ||| |||||||||||| || |||||||||||||||              
T  23994651 atagacaactcagtcaacaactttgtatatcaaatttcactttgggttcttcacttgaacatctagcacaacttcaccaatacaaacaacttat------ 23994744  T
Q  405 ttcataaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacac 504  Q
    ||||||||||||||||  |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23994745 ttcataaaatggaatactcatgatatcattcaaggacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacac 23994844  T
Q  505 aatatccaaatccaacaattgagtaaaactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgca 604  Q
    ||||||| ||||||||||||||| ||||| ||||| ||  | ||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  23994845 aatatcccaatccaacaattgagcaaaacacataattatccattttcaccaaactaacaacaacaacttatttcacaacaacaaaattatgaatcatgca 23994944  T
Q  605 tacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  23994945 tacccaagccatgaattagcattcataacatcacttaacaacaacaacatctattg 23995000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 305; E-Value: 1e-171
Query Start/End: Original strand, 30 - 660
Target Start/End: Original strand, 26089194 - 26089812
Alignment:
Q  30 acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataatgcacagaaaaatc 129  Q
    ||||||||||   |||||| ||||| ||||||| ||||||| ||| ||||||  |||| || || | ||| |||||  |||| ||||   ||||||| |     
T  26089194 acgttttcgcatgtaaaaaccaaactgttaatccgttttcggtgctgttttcctctacttgttcatgacacttagccctatcttaatatgcagaaaattt 26089293  T
Q  130 ccagtttcaacaacctcaaattcattttacaagcctc-acacaaacactcattttccaaaacggttaacaaatgaattttcaaacgaaactcccgttttc 228  Q
    | ||||||||||  | |||||||||||| |||  | | |||||| |||||||||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  26089294 caagtttcaacattcccaaattcattttccaaaaccctacacaa-cactcattttccaaaacggttaacaattgaattttcacccgaaactcccgttttc 26089392  T
Q  229 tcccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaaccacataggcaactcaatcaacaactt 328  Q
    | |||||||||||||||||||||||| || || ||    |||| ||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||    
T  26089393 ttccaaaacgactcgactatcataactacaaccta----aaaacagaaattccatcaagtttaactcatccaaccacatagacaactcagttaacaactt 26089488  T
Q  329 tgtatatcaaatttcattttggtgcttcacatgaccatctagcacaattttaccaatacaaacaacnnnnnnnnncttcataaaatggaatatccatgat 428  Q
    |||||||||||||||| |||| | |||||| ||| |||||||||||| || |||||||||||||||          ||||||||||||||||  ||||||    
T  26089489 tgtatatcaaatttcactttgttccttcacttgaacatctagcacaacttcaccaatacaaacaacttat------ttcataaaatggaatactcatgat 26089582  T
Q  429 atcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacacaatatccaaatccaacaattgagt 528  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||     
T  26089583 atcattcaataacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacacaatatctcaatccaacaattgagc 26089682  T
Q  529 aaaactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatcc 628  Q
    ||||| |||||||| || |||||||  ||||||||||||||| |||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||    
T  26089683 aaaacacataagtattcattttcacccaaccaacaacaacaacttatttcacaacaac--aattatgaatcatgcatacccaaaccatgaattagcatcc 26089780  T
Q  629 ataacatcacttaacaacaacaacatctattg 660  Q
    ||||||||||||||||||||||||||||||||    
T  26089781 ataacatcacttaacaacaacaacatctattg 26089812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 30 - 654
Target Start/End: Original strand, 18776612 - 18777217
Alignment:
Q  30 acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataatgcacagaaaaatc 129  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || || | ||| |||||  |||| ||||| ||||||||||     
T  18776612 acgttttcacgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacgtgttcatgacacttagccctatcttaatgtacagaaaaatt 18776711  T
Q  130 ccagtttcaacaacctcaaattcattttac-aagcctcacacaaacactca-ttttccaaaacggttaacaaatgaattttcaaacgaaactcccgtttt 227  Q
    | ||||||||||  | |||||||||||| | |||||| |||| |||||||| |||||||||||||||||||| ||||||||||  |||||| |||| |||    
T  18776712 caagtttcaacattcccaaattcattttccaaagccttacac-aacactcatttttccaaaacggttaacaattgaattttcacccgaaacccccgattt 18776810  T
Q  228 ctcccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaaccacataggcaactcaatcaacaac- 326  Q
    ||||| ||||||||||||||||| ||| ||     ||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||     
T  18776811 ctccc-aaacgactcgactatcacaactac----aacataaaaacagaaattccatcaagttcaactcatccaaccacatagacaactcagtcaacaact 18776905  T
Q  327 -tttgtatatcaaatttca-ttttggtgcttcacatgaccatctagcacaattttaccaatacaaacaacnnnnnnnnncttcataaaatggaatatcca 424  Q
     | | ||||||||||||||  || ||  |||||||||| |||||||||||| || | ||||| |||||||          |||||||||||||||| |||    
T  18776906 atatatatatcaaatttcaccttgggcccttcacatgaacatctagcacaacttcagcaatagaaacaacttat------ttcataaaatggaataccca 18776999  T
Q  425 tgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacacaatatccaaatccaacaatt 524  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||           |||||||||||||||||||| ||||||||||||    
T  18777000 taatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacttg-----------aattcaacaacacaatatcccaatccaacaatt 18777088  T
Q  525 gagtaaaactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagc 624  Q
    ||  ||||||||||||||    ||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  18777089 gaacaaaactcataagtatctattttcaccaaaccaacaacaacaacttatttcacaacaac-aaattatgaatcatgcatacccaagccatgaattagc 18777187  T
Q  625 atccataacatcacttaacaacaacaacat 654  Q
    ||||||||||||||||||||||||||||||    
T  18777188 atccataacatcacttaacaacaacaacat 18777217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 172 - 660
Target Start/End: Original strand, 18569880 - 18570356
Alignment:
Q  172 aacactcatttt-ccaaaacggttaacaaatgaattttcaaacgaaactcccgttttctcccaaaacgactcgactatcataaccacgacatacataaaa 270  Q
    |||||||||||| |||||||||||||||| ||||||||||  |||||| |||  ||||||||||| |||| ||||||||| ||| || |||||    | |    
T  18569880 aacactcatttttccaaaacggttaacaattgaattttcacccgaaacccccaatttctcccaaa-cgacccgactatcacaactacaacata----ata 18569974  T
Q  271 atagaaattccatcaagtttaactcatccaaccacataggcaactcaatcaacaactttgtatatcaaatttcattttggtgcttcacatgaccatctag 370  Q
    | | ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||| | ||||||||||  |||| |    
T  18569975 acataaattccatcaagtttaactcatccaaccacatagacaactcagtcaacaactttgtatatcaaatttcactttgttccttcacatgattatcttg 18570074  T
Q  371 cacaattttaccaatacaaacaacnnnnnnnnncttcataaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaacacttca 470  Q
    ||||  || |||||||||||||||          |||||||||||||||| |||||||||| |||||||||||||||||||||| |||||||||||||||    
T  18570075 cacatcttcaccaatacaaacaacttat------ttcataaaatggaatacccatgatatcgttcaacaacaacaacatatctaattcaacaacacttca 18570168  T
Q  471 tttagacatgaattcaaccataattcaacaacacaatatccaaatccaacaattgagtaaaactcataagtactccttttcactaaaccaacaacaacaa 570  Q
    |||||||||||||||||| |||||||||||||||||||||  ||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||| |    
T  18570169 tttagacatgaattcaactataattcaacaacacaatatctcaatccaacaattgagcaaaactcataagtactcattttcaccaaaccaacaacaac-a 18570267  T
Q  571 tttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
     ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || |||||||    
T  18570268 cttatttcacaacaac-aaattatgaatcatgcatacccaggccatgaattagcatccataacatcacttaacaacaactacttctattg 18570356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 30 - 341
Target Start/End: Complemental strand, 15735551 - 15735244
Alignment:
Q  30 acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataatgcacagaaaaatc 129  Q
    ||||||||| || |||||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  15735551 acgttttcgtgcgtaaaaatcaaactgttaatccgtttttgatgccgttttcacctacatgctcctaacaattagcactatcataatgcacagaaaaatc 15735452  T
Q  130 ccagtttcaacaacctcaaattcattttacaagcctcacacaaacactcattttccaaaacggttaacaaatgaattttcaaacgaaactcccgttttct 229  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15735451 ccaatttcaacaacctcaaattcattttacaagcctcacacaaacactcattttccaaaacggttaacaaatgaattttcaaacgaaactcccgttttct 15735352  T
Q  230 cccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaaccacataggcaactcaatcaacaacttt 329  Q
    ||||||||||||||||||||||||||||     ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  15735351 cccaaaacgactcgactatcataaccac----aacataaaaacagaaattccatcaagtttaactcatccaaccacatagacaactcagtcaacaacttt 15735256  T
Q  330 gtatatcaaatt 341  Q
    ||||||||||||    
T  15735255 gtatatcaaatt 15735244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 6 - 302
Target Start/End: Complemental strand, 13621456 - 13621164
Alignment:
Q  6 gacatcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagc 105  Q
    |||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  13621456 gacagcatcagattttcaacttctacatttttgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcacctacatgctcctaacaattagc 13621357  T
Q  106 agtatcataatgcacagaaaaatcccagtttcaacaacctcaaattcattttacaagcctcacacaaacactcattttccaaaacggttaacaaatgaat 205  Q
    | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13621356 actatcataatgcacagaaaaatcccaatttcaacaacctcaaattcattttacaagcctcacacaaacactcattttccaaaacggttaacaaatgaat 13621257  T
Q  206 tttcaaacgaaactcccgttttctcccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaac 302  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| ||     ||||||||| ||||||||||||||||| || |||||||||    
T  13621256 tttcaaacgaaactcccgttttctcccaaaacgacttgactatcataactac----aacataaaaacagaaattccatcaagttcaattcatccaac 13621164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 11 - 660
Target Start/End: Original strand, 25650672 - 25651314
Alignment:
Q  11 catcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtat 110  Q
    ||||||||||||| | |  ||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||| |||| ||| |||||  |||    
T  25650672 catcagattttcatccttcacgttttcgcgcataaaaatcaaactgttaatctaatttcgatgccgttttcacctacatgttcctgacacttagccttat 25650771  T
Q  111 cataatgcacagaaaaatcccagtttcaacaacctcaaattcattttac-aagcctcacacaaacactcattttccaaaacggttaacaaatgaattttc 209  Q
    | ||||| |||||||||| | ||||||||||||| ||| |||||||| | || ||| ||||||||||||||||| ||||||||||||||| |||||||||    
T  25650772 cttaatgtacagaaaaattcaagtttcaacaaccccaacttcattttccaaaaccttacacaaacactcattttacaaaacggttaacaattgaattttc 25650871  T
Q  210 aaacgaaactcccgttttctcccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaaccacatag 309  Q
    | ||||||||  | ||||||||| ||||||||||||||||| ||||||     ||||||||| |||||||| | ||||||||||||||||||  |||  |    
T  25650872 acacgaaactttcattttctccc-aaacgactcgactatcacaaccac----aacataaaaacagaaattctaccaagtttaactcatccaataacactg 25650966  T
Q  310 gcaactcaatcaacaactttgtatatc-aaatttcattttg-gtgcttcacatgaccatc-tagcacaattttaccaatacaaacaacnnnnnnnnnctt 406  Q
     ||||||| |||| ||||||||||||| ||| ||||||||| || |||||||||| |||| |||||||| || |||||| ||||||||         |||    
T  25650967 acaactcagtcaaaaactttgtatatcgaaagttcattttgagtccttcacatgaacatcttagcacaacttcaccaattcaaacaac-------aactt 25651059  T
Q  407 cataaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacacaa 506  Q
    || ||||||||||| ||||| ||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  25651060 cacaaaatggaatacccatggtataattcaacaacaacaacatatttaattcaacaacacttcatttagacatgaattcaaccataattcaacaacacga 25651159  T
Q  507 tatccaaatccaacaa-ttgagtaaaactca-taagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgca 604  Q
     |||  ||| || ||| ||||| ||||||||  |||||| | ||||||| |||||||||||||||| ||| ||| || || |  ||| |||| | ||| |    
T  25651160 catcacaattcatcaatttgagcaaaactcacaaagtacccattttcacaaaaccaacaacaacaacttaattctcatcatc-caatcatgatttatgaa 25651258  T
Q  605 tacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
     ||||||||||||||| | || | | || |||||||| ||||||||||||| ||||    
T  25651259 cacccaagccatgaatcatcaacaacaatatcacttagcaacaacaacatcaattg 25651314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 456 - 653
Target Start/End: Complemental strand, 15742604 - 15742408
Alignment:
Q  456 ttcaacaacacttcatttagacatgaattcaaccataattcaacaacacaatatccaaatccaacaattgagtaaaactcataagtactccttttcacta 555  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||| ||  | ||||||| |    
T  15742604 ttcaacaacacttcatttagacatgaattcaaccataattcaacaacacaatatcccaatccaacaattgagcaaaacacataattatccattttcacca 15742505  T
Q  556 aaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaaca 653  Q
    ||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  15742504 aaccagcaacaacaacttatttcacaacaac-aaattatgaatcatgcatacccaagccatgaattagcattcataacatcacttaacaacaacaaca 15742408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 16231499 - 16231595
Alignment:
Q  20 ttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataat 116  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| || ||| |||||||||    
T  16231499 ttcaacttctacgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcgcctacatgctcctaacacttggcactatcataat 16231595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 18087471 - 18087375
Alignment:
Q  20 ttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataat 116  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||| || ||| |||||||||    
T  18087471 ttcaacttctacgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgcagttttcgcctacatgctcctaacacttggcactatcataat 18087375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 23977376 - 23977472
Alignment:
Q  20 ttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataat 116  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||| || ||| |||||||||    
T  23977376 ttcaacttctacgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgtttccgcctacatgctcctaacacttggcactatcataat 23977472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 11 - 140
Target Start/End: Complemental strand, 13750715 - 13750587
Alignment:
Q  11 catcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtat 110  Q
    ||||||||||||||| |  ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||| |||||  |||    
T  13750715 catcagattttcaaccttcacgttttcgcgcataaaaatcaaactgttaatctgttttcgatgcc-ttttcacctacatgctcctgacacttagccctat 13750617  T
Q  111 cataatgcacagaaaaatcccagtttcaac 140  Q
    ||||||  ||||||| || | |||||||||    
T  13750616 cataatctacagaaagattcaagtttcaac 13750587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 13 - 140
Target Start/End: Complemental strand, 18259612 - 18259485
Alignment:
Q  13 tcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatca 112  Q
    ||||||||||||| |  |||||||||| ||||| |||||||||||||| | |||||||||||||||||  |||| | |||||| ||| |||||  |||||    
T  18259612 tcagattttcaaccttcacgttttcgcacataataatcaaaccgttaacccgttttcgatgccgtttttgcctaaacgctcctgacacttagctctatca 18259513  T
Q  113 taatgcacagaaaaatcccagtttcaac 140  Q
    ||||  |||||||||| | |||||||||    
T  18259512 taatctacagaaaaattcaagtttcaac 18259485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 30 - 140
Target Start/End: Original strand, 24267475 - 24267585
Alignment:
Q  30 acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataatgcacagaaaaatc 129  Q
    |||||||||||| |||||  ||||||||||| | |||||||||||||||||| |||||| |||||| ||| |||||  |||||||||  ||||||||||     
T  24267475 acgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgccgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaatt 24267574  T
Q  130 ccagtttcaac 140  Q
    | |||||||||    
T  24267575 caagtttcaac 24267585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 16448220 - 16448139
Alignment:
Q  6 gacatcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctac 87  Q
    |||| ||||||||||||| | |  |||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||    
T  16448220 gacagcatcagattttcacccttcacgttttcgcgcctaaaaatcaaaccgttaaccagttttcgatgccgttttcacctac 16448139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 404 - 503
Target Start/End: Original strand, 19175156 - 19175256
Alignment:
Q  404 cttcataaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaac-acttcatttagacatgaattcaaccataattcaacaac 502  Q
    ||||| ||||||||||| ||||| ||  | ||||||||||||||||||| | ||||||||| |||||||||| ||||||||||||||| || ||||||||    
T  19175156 cttcagaaaatggaatacccatggtacaaatcaacaacaacaacatatccaattcaacaacaacttcatttaaacatgaattcaaccacaaatcaacaac 19175255  T
Q  503 a 503  Q
    |    
T  19175256 a 19175256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 13 - 116
Target Start/End: Complemental strand, 8227169 - 8227066
Alignment:
Q  13 tcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatca 112  Q
    ||||||||||||| |  |||||||||| |||||||| ||||||||||| | |||||||||||||||||| |||| | |||||| ||| |||||  |||||    
T  8227169 tcagattttcaaccttcacgttttcgctcataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctaaacgctcctgacacttagccctatca 8227070  T
Q  113 taat 116  Q
    ||||    
T  8227069 taat 8227066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 30 - 140
Target Start/End: Complemental strand, 5110133 - 5110023
Alignment:
Q  30 acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataatgcacagaaaaatc 129  Q
    |||||||||||| |||||  ||||||||||| | |||||||||||||||||| |||||| |||||| ||| |||||  |||||||||  |||||||||      
T  5110133 acgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgccgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaact 5110034  T
Q  130 ccagtttcaac 140  Q
    | |||||||||    
T  5110033 caagtttcaac 5110023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 116
Target Start/End: Complemental strand, 23532325 - 23532222
Alignment:
Q  13 tcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatca 112  Q
    ||||||||||||| |  |||||||||| |||||||| ||||||||||| | |||||||||||||||||| |||| | || ||| ||| |||||  |||||    
T  23532325 tcagattttcaaccttcacgttttcgctcataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctaaacgcacctgacacttagccctatca 23532226  T
Q  113 taat 116  Q
    ||||    
T  23532225 taat 23532222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 584 - 653
Target Start/End: Original strand, 22440936 - 22441004
Alignment:
Q  584 aacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaaca 653  Q
    |||||||| |||||||||||| ||||||||||||||||| |||| | ||||| |||||||||||||||||    
T  22440936 aacaaaatcatgaatcatgca-acccaagccatgaattatcatcaacaacatgacttaacaacaacaaca 22441004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 127
Target Start/End: Complemental strand, 29415977 - 29415880
Alignment:
Q  30 acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataatgcacagaaaaa 127  Q
    ||||||||||||||||||  ||||||||||| |  ||||||||| ||||||| |||||| |||||| ||| |||||  |||||||||  |||||||||    
T  29415977 acgttttcgcgcataaaatccaaaccgttaacccattttcgatgtcgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaa 29415880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 548 - 660
Target Start/End: Complemental strand, 18381964 - 18381853
Alignment:
Q  548 tttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaaca 647  Q
    |||||| |||||| ||||||||| | ||||| || ||||||| | |||||| ||| ||||||||||||||||| | || | | ||||||||||| |||||    
T  18381964 tttcacaaaaccaccaacaacaactcatttctcatcaacaaa-tcatgaattatgaatacccaagccatgaatcatcaacaacaacatcacttagcaaca 18381866  T
Q  648 acaacatctattg 660  Q
    |||||||| ||||    
T  18381865 acaacatcaattg 18381853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 593 - 660
Target Start/End: Original strand, 18398948 - 18399015
Alignment:
Q  593 atgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||||| ||||| ||||||||||||||||| |||| | ||||||||||| ||||||||||||| ||||    
T  18398948 atgaattatgcacacccaagccatgaattatcatcaacaacatcacttagcaacaacaacatcaattg 18399015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 93
Target Start/End: Original strand, 24563048 - 24563135
Alignment:
Q  6 gacatcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctc 93  Q
    |||| |||||||||||| || |  |||||||||||| |||||| | ||||||||| | |||||||||||||||||| |||||| ||||    
T  24563048 gacagcatcagattttcgaccttcacgttttcgcgcgtaaaaacccaaccgttaacccgttttcgatgccgttttcgcctacacgctc 24563135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 439 - 503
Target Start/End: Original strand, 21931244 - 21931309
Alignment:
Q  439 aacaacaacatatctacttcaacaac-acttcatttagacatgaattcaaccataattcaacaaca 503  Q
    |||||||||||||||| ||||||||| |||||||||  ||||||||||||||| || |||||||||    
T  21931244 aacaacaacatatctaattcaacaacaacttcatttgaacatgaattcaaccacaaatcaacaaca 21931309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 548 - 653
Target Start/End: Complemental strand, 35015446 - 35015342
Alignment:
Q  548 tttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaaca 647  Q
    |||||| |||||| ||||||||||  ||||| |||||||||| | |||||||||||| |||||||||||| || | |||| | || || ||| |||||||    
T  35015446 tttcacaaaaccaccaacaacaatccatttctcaacaacaaa-tcatgaatcatgcaaacccaagccatgtatcatcatcaacaatatgactaaacaaca 35015348  T
Q  648 acaaca 653  Q
    ||||||    
T  35015347 acaaca 35015342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 588 - 660
Target Start/End: Original strand, 31628273 - 31628345
Alignment:
Q  588 aaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||| |||||||||||| ||||||||||||||||| |||| | ||||| || || ||||||||||||| ||||    
T  31628273 aaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaacaacaacatcaattg 31628345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 6 - 116
Target Start/End: Complemental strand, 5289517 - 5289406
Alignment:
Q  6 gacatcatcagattttcaacttct-acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattag 104  Q
    |||| |||||||||||| | || | |||||||||||| |||||  ||||||||||| | |||||||||||||||||| |||||   ||||| ||| ||||    
T  5289517 gacaacatcagattttctaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgccgttttcgcctacgcactcctgacacttag 5289418  T
Q  105 cagtatcataat 116  Q
    |  |||||||||    
T  5289417 ctctatcataat 5289406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 88
Target Start/End: Complemental strand, 33314846 - 33314792
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctaca 88  Q
    ||||||||||||||  ||||||||||||| | ||| |||||||||||||||||||    
T  33314846 tttcgcgcataaaatgcaaaccgttaatcggattttgatgccgttttcacctaca 33314792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 10488316 - 10488377
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcct 95  Q
    |||||||| |||||  ||||||||||||| | ||| ||||||||||||||||||||| ||||    
T  10488316 tttcgcgcgtaaaatgcaaaccgttaatcggattttgatgccgttttcacctacatgatcct 10488377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 95
Target Start/End: Complemental strand, 16377012 - 16376951
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcct 95  Q
    |||||||| |||||  ||||||||||||| | ||| ||||||||||||||||||||| ||||    
T  16377012 tttcgcgcgtaaaatgcaaaccgttaatcggattttgatgccgttttcacctacatgatcct 16376951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 95
Target Start/End: Complemental strand, 16384336 - 16384275
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcct 95  Q
    |||||||| |||||  ||||||||||||| | ||| ||||||||||||||||||||| ||||    
T  16384336 tttcgcgcgtaaaatgcaaaccgttaatcggattttgatgccgttttcacctacatgatcct 16384275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 555 - 627
Target Start/End: Original strand, 18583307 - 18583377
Alignment:
Q  555 aaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatc 627  Q
    |||||| ||||||||| | ||||| |||||||||  | |||||||||||| ||||||||||||||||| ||||    
T  18583307 aaaccaccaacaacaactcatttctcaacaacaa--tcatgaatcatgcaaacccaagccatgaattatcatc 18583377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 548 - 653
Target Start/End: Complemental strand, 19983580 - 19983476
Alignment:
Q  548 tttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaaca 647  Q
    |||||| |||||| ||||||||||  ||||| ||||||||||   |||||||||||| |||||||||||| || | |||| | || || ||| |||||||    
T  19983580 tttcacaaaaccaccaacaacaatccatttctcaacaacaaacc-atgaatcatgcaaacccaagccatgtatcatcatcaacaatatgactaaacaaca 19983482  T
Q  648 acaaca 653  Q
    ||||||    
T  19983481 acaaca 19983476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 116
Target Start/End: Original strand, 24441306 - 24441375
Alignment:
Q  47 aatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataat 116  Q
    |||||||||||||| | |||||||||||||||||  |||||| |||||| ||| |||||  |||||||||    
T  24441306 aatcaaaccgttaacccgttttcgatgccgtttttgcctacacgctcctgacacttagccctatcataat 24441375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 547 - 655
Target Start/End: Complemental strand, 29160585 - 29160478
Alignment:
Q  547 ttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaac 646  Q
    ||||||| ||||||| |||||||| |||||||||| || |||| | |||| | ||| |||||||||| |||||| | || | | || ||| |||||||||    
T  29160585 ttttcacaaaaccaataacaacaacttatttcacatca-caaactcatgatttatgaatacccaagctatgaatcatcaacaacaatatctcttaacaac 29160487  T
Q  647 aacaacatc 655  Q
    |||||||||    
T  29160486 aacaacatc 29160478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 593 - 660
Target Start/End: Complemental strand, 18823633 - 18823566
Alignment:
Q  593 atgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||||||||||| |||||||||||| |||| |||| | ||||| || || ||||||||||||| ||||    
T  18823633 atgaatcatgcaaacccaagccatggattatcatcaacaacatgacatatcaacaacaacatcaattg 18823566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 593 - 660
Target Start/End: Complemental strand, 18839488 - 18839421
Alignment:
Q  593 atgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||||||||||| |||||||||||| |||| |||| | ||||| || || ||||||||||||| ||||    
T  18839488 atgaatcatgcaaacccaagccatggattatcatcaacaacatgacatatcaacaacaacatcaattg 18839421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 404 - 486
Target Start/End: Original strand, 19168853 - 19168936
Alignment:
Q  404 cttcataaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaac-acttcatttagacatgaattca 486  Q
    ||||| ||||||||||| ||||| ||  | ||| ||||||||||||||||| ||||||||| | ||| |||| |||||||||||    
T  19168853 cttcacaaaatggaatacccatggtacaaatcagcaacaacaacatatctaattcaacaacaatttcttttaaacatgaattca 19168936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 593 - 652
Target Start/End: Original strand, 32898800 - 32898859
Alignment:
Q  593 atgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaac 652  Q
    |||||||||||| ||||||||||| ||||| |||| | ||||| ||| ||||||||||||    
T  32898800 atgaatcatgcaaacccaagccattaattatcatcaacaacatgactaaacaacaacaac 32898859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 34 - 88
Target Start/End: Complemental strand, 16650010 - 16649956
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctaca 88  Q
    |||||||| |||||  ||||||||||||| | ||| |||||||||||||||||||    
T  16650010 tttcgcgcgtaaaatgcaaaccgttaatcggattttgatgccgttttcacctaca 16649956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 595 - 653
Target Start/End: Complemental strand, 25744448 - 25744390
Alignment:
Q  595 gaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaaca 653  Q
    |||| ||||| ||||||||||||||||| |||| | ||||| ||| |||||||||||||    
T  25744448 gaattatgcaaacccaagccatgaattatcatcaacaacatgactaaacaacaacaaca 25744390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 434 - 503
Target Start/End: Complemental strand, 31467808 - 31467739
Alignment:
Q  434 tcaacaacaacaacatatctacttcaacaaca-cttcatttagacatgaattcaaccataattcaacaaca 503  Q
    |||||| |||||||||||| | ||||| |||| ||||||| | |||||||||||||||||| |||||||||    
T  31467808 tcaacagcaacaacatatcaaattcaataacaacttcattaa-acatgaattcaaccataaatcaacaaca 31467739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 449
Target Start/End: Complemental strand, 7365906 - 7365861
Alignment:
Q  404 cttcataaaatggaatatccatgatatcattcaacaacaacaacat 449  Q
    ||||| ||| ||||| ||||||||||| ||||||||||||||||||    
T  7365906 cttcacaaattggaacatccatgatataattcaacaacaacaacat 7365861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 95
Target Start/End: Complemental strand, 19443451 - 19443390
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcct 95  Q
    |||||||| ||||| || ||||||||||| | ||| |||||||||||| ||||||| |||||    
T  19443451 tttcgcgcgtaaaattccaaccgttaatcggattttgatgccgttttcgcctacattctcct 19443390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 125
Target Start/End: Original strand, 28948208 - 28948297
Alignment:
Q  36 tcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataatgcacagaaa 125  Q
    |||||| ||||  |||||||||||||| | ||| |||||||||||| |||| |||||||| ||| || ||  |||||||||  |||||||    
T  28948208 tcgcgcgtaaagttcaaaccgttaatcggattttgatgccgttttcgcctatatgctcctgacacttggctctatcataatctacagaaa 28948297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 404 - 503
Target Start/End: Original strand, 16136288 - 16136387
Alignment:
Q  404 cttcataaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaac-acttcatttagacatgaattcaaccataattcaacaac 502  Q
    ||||| |||||| |||| ||||| ||  | ||||||||||||||||||| | ||||||||| | |||||||  |||| |||||||||| || ||||||||    
T  16136288 cttcacaaaatgaaatacccatggtacaaatcaacaacaacaacatatccaattcaacaacaatttcatttgaacat-aattcaaccacaaatcaacaac 16136386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 596 - 660
Target Start/End: Original strand, 18432656 - 18432720
Alignment:
Q  596 aatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    ||||||||| ||||||||||||||||| |||| | ||||| || || |||||||| |||| ||||    
T  18432656 aatcatgcaaacccaagccatgaattatcatcaacaacataacatatcaacaacatcatcaattg 18432720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 452; Significance: 0; HSPs: 84)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 452; E-Value: 0
Query Start/End: Original strand, 6 - 660
Target Start/End: Original strand, 53770473 - 53771118
Alignment:
Q  6 gacatcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagc 105  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| |||||    
T  53770473 gacaacatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcgcctacatgctcctaacacttagc 53770572  T
Q  106 agtatcataatgcacagaaaaatcccagtttcaacaacctcaaattcattttacaagcctcacacaaacactcattttccaaaacggttaacaaatgaat 205  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  53770573 actatcataatgcacagaaaaatcccagtttcaacaacctcaaattcattttacaaacctcacacaaacactcattttccaaaacggttaacaattgaat 53770672  T
Q  206 tttcaaacgaaactcccgttttctcccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaaccac 305  Q
    |||||||||||||||||||||||| ||||||||||||||||| | ||||||      ||||||||| |||||||||||||||||||||||||||||||||    
T  53770673 tttcaaacgaaactcccgttttcttccaaaacgactcgactaacgtaacca----taacataaaaacagaaattccatcaagtttaactcatccaaccac 53770768  T
Q  306 ataggcaactcaatcaacaactttgtatatcaaatttca-ttttggtgcttcacatgaccatctagcacaattttaccaatacaaacaacnnnnnnnnnc 404  Q
    |||| ||||||| |||||||||||||||||||||||||| ||| ||| |||||| ||| |||||||||||| || |||||||||||||||              
T  53770769 atagacaactcagtcaacaactttgtatatcaaatttcactttgggttcttcacttgaacatctagcacaacttcaccaatacaaacaacttat------ 53770862  T
Q  405 ttcataaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacac 504  Q
    ||||||||||||||||  |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53770863 ttcataaaatggaatactcatgatatcattcaaggacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacac 53770962  T
Q  505 aatatccaaatccaacaattgagtaaaactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgca 604  Q
    ||||||| ||||||||||||||| ||||| ||||| ||  | ||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  53770963 aatatcccaatccaacaattgagcaaaacacataattatccattttcaccaaactaacaacaacaacttatttcacaacaacaaaattatgaatcatgca 53771062  T
Q  605 tacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  53771063 tacccaagccatgaattagcattcataacatcacttaacaacaacaacatctattg 53771118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 428; E-Value: 0
Query Start/End: Original strand, 6 - 660
Target Start/End: Original strand, 16260894 - 16261530
Alignment:
Q  6 gacatcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagc 105  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  16260894 gacaacatcagattttcaacttctacgttttcgcgcataaaaatcaaatcgttaatccgttttcgatgccattttcacctacatgctcctaacaattagc 16260993  T
Q  106 agtatcataatgcacagaaaaatcccagtttcaacaacctcaaattcattttacaagcctcacacaaacactcattttccaaaacggttaacaaatgaat 205  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  16260994 actatcataatgcacagaaaaatcccagtttcaacaacctcaaattcattttacaaacctcacacaaacactcattttccaaaacggttaacaaatgaat 16261093  T
Q  206 tttcaaacgaaactcccgttttctcccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaaccac 305  Q
    ||||||||||||||||||||||||||||||||||||| |||| |  ||||||     ||||||||| |||||||||||||||||||||||||||||||||    
T  16261094 tttcaaacgaaactcccgttttctcccaaaacgactccactaacgcaaccac----aacataaaaacagaaattccatcaagtttaactcatccaaccac 16261189  T
Q  306 ataggcaactcaatcaacaactttgtatatcaaatttca-ttttggtgcttcacatgaccatctagcacaattttaccaatacaaacaacnnnnnnnnnc 404  Q
    |||| ||||||| |||||||||||||||||||||||||| ||| ||| |||||| ||| |||||||||||| || |||||||||||||||              
T  16261190 atagacaactcagtcaacaactttgtatatcaaatttcactttgggttcttcacttgaacatctagcacaacttcaccaatacaaacaacttat------ 16261283  T
Q  405 ttcataaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacac 504  Q
    ||||||||||||||||   |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16261284 ttcataaaatggaatacttatgatatcattcaagaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacac 16261383  T
Q  505 aatatccaaatccaacaattgagtaaaactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgca 604  Q
    ||||||| ||||||||||||||| ||||| ||||||||  | ||||||| |||| ||||||||||| ||          |||||||||||||||||||||    
T  16261384 aatatcccaatccaacaattgagcaaaacacataagtatccattttcaccaaactaacaacaacaactt---------taacaaaattatgaatcatgca 16261474  T
Q  605 tacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16261475 tacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 16261530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 348; E-Value: 0
Query Start/End: Original strand, 6 - 660
Target Start/End: Original strand, 23491806 - 23492450
Alignment:
Q  6 gacatcatcagattttcaacttct-acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattag 104  Q
    |||| |||||||||||| | || | |||||||||||| |||||| ||||||||||||| ||||||| |||||||||||||||| || || | ||| ||||    
T  23491806 gacaacatcagattttccaattttcacgttttcgcgcgtaaaaaccaaaccgttaatccgttttcggtgccgttttcacctacttgttcatgacacttag 23491905  T
Q  105 cagtatcataatgcacagaaaaatcccagtttcaacaacctcaaattcattttacaa-gcctcacacaaacactcattttccaaaacggttaacaaatga 203  Q
    |  |||| ||||| |||||||||| | ||||||||||  | |||||||||||| ||| |||| |||||| |||||||||||||||||||||||||| |||    
T  23491906 ccctatcttaatgtacagaaaaattcaagtttcaacattcccaaattcatttttcaaagccttacacaa-cactcattttccaaaacggttaacaattga 23492004  T
Q  204 attttcaaacgaaactcccgttttctcccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaacc 303  Q
    |||||||  |||| ||||||||||||||||||||||||||||||||| ||| || || ||    |||| |||||||||||||||||||||||||||||||    
T  23492005 attttcacccgaatctcccgttttctcccaaaacgactcgactatcacaactacaaccta----aaaacagaaattccatcaagtttaactcatccaacc 23492100  T
Q  304 acataggcaactcaatcaacaactttgtatatcaaatttcattttggtgcttcacatgaccatctagcacaattttaccaatacaaacaacnnnnnnnnn 403  Q
    |||||| ||||||| |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| || |||||||||||||||             
T  23492101 acatagacaactcagtcaacaactttgtatatcaaatttcactttggtccttcacatgaccatctagcacaacttcaccaatacaaacaactta------ 23492194  T
Q  404 cttcataaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaaca 503  Q
    |||||| |||||||||| ||||| ||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||| ||||||||||  |||    
T  23492195 cttcatgaaatggaatacccatgttatcattcaacaacatcaacatatctactttaacaacacctcatttagacatgaattcaatcataattcaattaca 23492294  T
Q  504 caatatccaaatccaacaattgagtaaaactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgc 603  Q
    |||||||| ||||||||||||||| ||||| ||||||||  | ||||||| |||||||||||||||| ||||||||||||||| ||| ||||||||||||    
T  23492295 caatatcccaatccaacaattgagcaaaacacataagtatccattttcaccaaaccaacaacaacaacttatttcacaacaac-aaactatgaatcatgc 23492393  T
Q  604 atacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23492394 atacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 23492450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 337; E-Value: 0
Query Start/End: Original strand, 31 - 660
Target Start/End: Original strand, 2843651 - 2844268
Alignment:
Q  31 cgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataatgcacagaaaaatcc 130  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| || || | ||| ||| |  |||| ||||| |||||||| ||     
T  2843651 cgttttcgcgcataaaaatcaaaccattaatccgttttcgatgccgttttcacctacgtgttcatgacacttaaccctatcttaatgtacagaaaattca 2843750  T
Q  131 cagtttcaacaacctcaaattcattttacaa-gcctcacacaaacactcatttt-ccaaaacggttaacaaatgaattttcaaacgaaactcccgttttc 228  Q
     |||||||| |  | |||||||||||| ||| |||| |||||| |||||||||| |||||||||||||||| ||||||||||  |||||| |||  ||||    
T  2843751 -agtttcaaaattcccaaattcattttccaaagccttacacaa-cactcatttttccaaaacggttaacaattgaattttcatccgaaacccccaatttc 2843848  T
Q  229 tcccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaaccacataggcaactcaatcaacaactt 328  Q
    ||||||  |||||||||||||| ||| || | |||    |||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  2843849 tcccaa--cgactcgactatcacaactacaatata----aaaacagaaattccatcaagtttaactcatccaaccacatagacaactcagtcaacaactt 2843942  T
Q  329 tgtatatcaaatttcattttggtgcttcacatgaccatctagcacaattttaccaatacaaacaacnnnnnnnnncttcataaaatggaatatccatgat 428  Q
    |||||||||||||||| |||||| |||||||||| |||||||||||| || || ||||||||||||          ||||||||||||||||||||||||    
T  2843943 tgtatatcaaatttcactttggtccttcacatgatcatctagcacaacttaactaatacaaacaacttat------ttcataaaatggaatatccatgat 2844036  T
Q  429 atcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacacaatatccaaatccaacaattgagt 528  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||     
T  2844037 atcattcaacaacaacaacatatctacttcaacaacacttcaattagacatgaattcaaccataattcaacaacacaatatcccaatccaacaattgagc 2844136  T
Q  529 aaaactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatcc 628  Q
    ||||| ||||||||  | ||||||| |||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2844137 aaaacacataagtatccattttcaccaaactaacaacaacaacttacttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatcc 2844236  T
Q  629 ataacatcacttaacaacaacaacatctattg 660  Q
    ||||||||||||||||||||||||||||||||    
T  2844237 ataacatcacttaacaacaacaacatctattg 2844268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 325; E-Value: 0
Query Start/End: Original strand, 6 - 660
Target Start/End: Original strand, 38167343 - 38167991
Alignment:
Q  6 gacatcatcagattttcaacttct-acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattag 104  Q
    |||| |||||||||||| | || | |||||||||||| |||||| ||||||||||| | |||||||||||||||||||||||||  ||||| ||| ||||    
T  38167343 gacaacatcagattttccaattttcacgttttcgcgcgtaaaaaccaaaccgttaacccgttttcgatgccgttttcacctacacactcctgacacttag 38167442  T
Q  105 cagtatcataatgcacagaaaaatcccagtttcaacaacctcaaattcattttacaa-gcctcacacaaacactcatttt-ccaaaacggttaacaaatg 202  Q
    |  |||| ||||| |||||||||| | ||||||||||    |||||||||||| ||| |||| |||||| |||||||||| |||||||||||||||| ||    
T  38167443 ccctatcttaatgtacagaaaaattcaagtttcaacatttccaaattcattttccaaagccttacacaa-cactcatttttccaaaacggttaacaattg 38167541  T
Q  203 aattttcaaacgaaactcccgtttt-ctcccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaa 301  Q
    ||||||||    ||||||||||||| ||||||||||||||||||||||| ||| || || ||    |||| |||||| ||||||||||||||||||||||    
T  38167542 aattttcacctaaaactcccgtttttctcccaaaacgactcgactatcacaactacaaccta----aaaacagaaatcccatcaagtttaactcatccaa 38167637  T
Q  302 ccacataggcaactcaatcaacaactttgtatatcaaatttcattttggtgc-ttcacatgaccatctagcacaattttaccaatacaaacaacnnnnnn 400  Q
    |||||||| || ||||||||||||||||||||||||||||| | |||||  | ||||||||| |||||||||||| || |||||||||||||||          
T  38167638 ccacatagacatctcaatcaacaactttgtatatcaaattttactttgggtcattcacatgaacatctagcacaacttcaccaatacaaacaacttat-- 38167735  T
Q  401 nnncttcataaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaaca 500  Q
        |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38167736 ----ttcataaaatgggatgtccatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaaca 38167831  T
Q  501 acacaatatccaaatccaacaa-ttgagtaaaactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatc 599  Q
    ||||||||| | |||||||||| ||||| ||||||||||||||| | ||||||| ||| |||||||||||| ||||||||||||||| ||||||||||||    
T  38167832 acacaatattccaatccaacaatttgagcaaaactcataagtacccattttcaccaaaacaacaacaacaacttatttcacaacaac-aaattatgaatc 38167930  T
Q  600 atgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  38167931 atgcatacccaagccatgaattaacatccataacatcacttaacaacaacaacatctattg 38167991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 20 - 660
Target Start/End: Original strand, 3991999 - 3992627
Alignment:
Q  20 ttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataatgca 119  Q
    ||||||||  || ||||||||||||| |||||||||||||||| |||| ||||||||||||||||||| |  || | ||| |||||  ||||  | || |    
T  3991999 ttcaactttcacattttcgcgcataataatcaaaccgttaatccgtttccgatgccgttttcacctacgttttcatgacacttagccctatctcagtgta 3992098  T
Q  120 cagaaaaatcccagtttcaacaacctcaaattcattttac-aagcctcacacaaacactcattttccaaaacggttaacaaatgaattttcaaacgaaac 218  Q
     |||||||| | ||||||||||  | |||||||||||| | |||||| |||||| |||||||||||||||||||||||||||||||||||||  ||||||    
T  3992099 aagaaaaattcaagtttcaacattcccaaattcattttcccaagccttacacaa-cactcattttccaaaacggttaacaaatgaattttcacccgaaac 3992197  T
Q  219 tcccgttttctcccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaaccacataggcaactcaa 318  Q
    ||||  ||||||||| | |||||||||||||| ||| || ||||     |||| |||||||| ||||||||||||||||||||||| |||| |||||||     
T  3992198 tcccaatttctcccaca-cgactcgactatcacaactacaacatg----aaaacagaaattctatcaagtttaactcatccaaccatatagacaactcag 3992292  T
Q  319 tcaacaactttgtatatcaaatttcattttgg-tgcttcacatgaccatctagcacaattttaccaatacaaacaacnnnnnnnnncttcataaaatgga 417  Q
    ||||||||||||||||||||||| |  ||||| | |||||||||| |||||||||||| || |||||||||||||||         ||||||||||||||    
T  3992293 tcaacaactttgtatatcaaattcccctttgggttcttcacatgaacatctagcacaacttcaccaatacaaacaacaa-------cttcataaaatgga 3992385  T
Q  418 atatccatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacacaatatccaaatcc 517  Q
    ||| ||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  3992386 atacccatggtataattcaacaaccacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacacaatatcccaatcc 3992485  T
Q  518 aacaattgagtaaaactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatg 617  Q
    |  ||||||| ||||| ||||||||    ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  3992486 at-aattgagcaaaacacataagtatcaattttcaccaaaccaacaacaacaacttatttcacaacaacaaaattatgaatcatgcatacccaagccatg 3992584  T
Q  618 aattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  3992585 aattagcatccataacatcacttaacaacaacaacatctattg 3992627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 6 - 660
Target Start/End: Original strand, 17100085 - 17100730
Alignment:
Q  6 gacatcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagc 105  Q
    |||| ||||||||||||||| |  ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| || || | ||| |||||    
T  17100085 gacaacatcagattttcaaccttcacgttttcgcgcataaaaatcaatccgttaatccgttttcgatgccgttttcacctacgtgttcatgacacttagc 17100184  T
Q  106 agtatcataatgcacagaaaaatcccagtttcaacaacctcaaattcattttac-aagcctcacacaaacactca-ttttccaaaacggttaacaaatga 203  Q
      |||| ||||| |||||||||| | ||||||||||||| |||||||||||| | |||||| |||| |||||||| |||||||||||||||||||| |||    
T  17100185 tctatcttaatgtacagaaaaattcaagtttcaacaaccccaaattcattttccaaagccttacac-aacactcatttttccaaaacggttaacaattga 17100283  T
Q  204 attttcaaacgaaactcccgttttctcccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaacc 303  Q
    |||||||  |||||| |    ||| |||| ||||||||||||||||| ||| ||     ||||||||| |||||||||||||||||||||||||||||||    
T  17100284 attttcacccgaaacacaaaatttatccc-aaacgactcgactatcacaactac----aacataaaaacagaaattccatcaagtttaactcatccaacc 17100378  T
Q  304 acataggcaactcaatcaacaactttgtatatcaaatttca-ttttggtgcttcacatgaccatctagcacaattttaccaatacaaacaacnnnnnnnn 402  Q
    |||||| ||||||| |||||||||||||||||||||||||| ||| |||  ||||||||| ||| |||||||| || |||||||||||||||            
T  17100379 acatagacaactcagtcaacaactttgtatatcaaatttcactttgggtctttcacatgaacatgtagcacaacttcaccaatacaaacaaccat----- 17100473  T
Q  403 ncttcataaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaac 502  Q
      ||||||||||||| || ||||| ||||||||||||||||||||||| ||| |||||||||| ||||||||||||  ||||||||||||||||||| ||    
T  17100474 --ttcataaaatggattacccatggtatcattcaacaacaacaacatacctaattcaacaacatttcatttagacagaaattcaaccataattcaaccac 17100571  T
Q  503 acaatatccaaatccaacaa-ttgagtaaaactcataagtactccttttcactaaaccaaca-acaacaatttatttcacaacaacaaaattatgaatca 600  Q
    ||||||||| |||||||||| ||||| ||||||||||||||  | ||||||| |||||||||  |||||| ||||||||||||||| |||||||||||||    
T  17100572 acaatatcccaatccaacaatttgagcaaaactcataagtatccattttcaccaaaccaacattcaacaacttatttcacaacaac-aaattatgaatca 17100670  T
Q  601 tgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||    
T  17100671 tgcatacccaagccatgaattaacatccataacatcacttaacaacaataacatcaattg 17100730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 260; E-Value: 1e-144
Query Start/End: Original strand, 6 - 553
Target Start/End: Original strand, 8604442 - 8604982
Alignment:
Q  6 gacatcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagc 105  Q
    |||| ||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||    
T  8604442 gacagcatcagattttcaaccttcacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgttcctgacacttagc 8604541  T
Q  106 agtatcataatgcacagaaaaatcccagtttcaacaacctcaaattcattttac-aagcctcacacaaacactcattttccaaaacggttaacaaatgaa 204  Q
      |||||||||| |||||||||| | ||||||||||||| |||||||||||| | || ||| ||||||||||||||||||||||||||||||||| ||||    
T  8604542 cctatcataatgtacagaaaaattcaagtttcaacaaccccaaattcattttccaaaaccttacacaaacactcattttccaaaacggttaacaattgaa 8604641  T
Q  205 ttttcaaacgaaactcccgttttctcccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaacca 304  Q
    |||||| ||||||||||||||||||||| ||| ||||||||||||| ||||||     ||||||||| |||||||| |  |||||||||||| ||||| |    
T  8604642 ttttcacacgaaactcccgttttctccc-aaatgactcgactatcacaaccac----aacataaaaacagaaattctacgaagtttaactcacccaacaa 8604736  T
Q  305 cataggcaactcaatcaacaactttgtatatc-aaatttcatttt-ggtgcttcacatgaccatc-tagcacaattttaccaatacaaacaacnnnnnnn 401  Q
    ||  | ||||||| |||||||||||||||||| |||||||||||| ||| |||||||||| |||| |||||||| || |||||| ||||||||           
T  8604737 caccgacaactcagtcaacaactttgtatatcaaaatttcattttgggtccttcacatgaacatcttagcacaacttcaccaattcaaacaac------- 8604829  T
Q  402 nncttcataaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaa 501  Q
      ||||| ||||||||||| ||||| ||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  8604830 aacttcacaaaatggaatacccatggtataattcaacaacaacaacatatctaattcaacaaaacttcatttagacatgaattcaaccataattcaacaa 8604929  T
Q  502 cacaatatccaaatccaacaa-ttgagtaaaactcataagtactccttttcac 553  Q
    |||||||||  |||||| ||| ||||| |||||||| |||||| | |||||||    
T  8604930 cacaatatcacaatccatcaatttgagcaaaactcacaagtacccattttcac 8604982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 14 - 660
Target Start/End: Original strand, 54423453 - 54424089
Alignment:
Q  14 cagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcat 113  Q
    |||||||||||| |  || |||||||||||||||||| ||  ||||||| |||||||||| ||||||||||||| || || | ||| |||||  ||||      
T  54423453 cagattttcaaccttcacattttcgcgcataaaaatcgaattgttaatccgttttcgatgtcgttttcacctacgtgttcatgacacttagccctatctg 54423552  T
Q  114 aatgcacagaaaaatcccagtttcaacaacctcaaattcattttac-aagcctcacacaaacactca--ttttccaaaacggttaacaaatgaattttca 210  Q
    |||| |||||||||| | |||||||||||||  ||||||||||| | |||||| |||| ||||||||  |||||||||||||||||||| ||||||||||    
T  54423553 aatgtacagaaaaattcaagtttcaacaaccctaaattcattttccaaagccttacac-aacactcattttttccaaaacggttaacaattgaattttca 54423651  T
Q  211 aacgaaactcccgttttctcccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaaccacatagg 310  Q
      |||||| | || |||||||| ||||||||||||||||| ||| ||     ||||||||| |||||||||||||||||||||||||| ||||||||||     
T  54423652 cccgaaaccctcgatttctccc-aaacgactcgactatcacaactac----aacataaaaacagaaattccatcaagtttaactcatcgaaccacataga 54423746  T
Q  311 caactcaatcaacaactttgtatatcaaatttca-ttttggtgcttcacatgaccatctagcacaattttaccaatacaaacaacnnnnnnnnncttcat 409  Q
    ||||||| |||||||||||||||||||||||||| ||| ||| ||| |||||| |||||||||||| || |||||||||||||||          |||||    
T  54423747 caactcagtcaacaactttgtatatcaaatttcactttgggtccttgacatgaacatctagcacaacttgaccaatacaaacaaccat-------ttcat 54423839  T
Q  410 aaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacacaatat 509  Q
    |||||||| || ||||| ||||||||||||| ||| ||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  54423840 aaaatggattacccatggtatcattcaacaataacgacatacctaattcaacaacatttcatttagacatgaattcaaccataattcaacaacacaatat 54423939  T
Q  510 ccaaatccaacaa-ttgagtaaaactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacc 608  Q
    |  |||| ||||| ||||| ||||||||||||||  | ||||||| |||||||||||||||| ||||||| | | ||| |||| ||||||||||||||||    
T  54423940 cacaatcgaacaatttgagcaaaactcataagtagccattttcaccaaaccaacaacaacaacttatttctc-ataac-aaatcatgaatcatgcatacc 54424037  T
Q  609 caagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||||||||||| | |||||| ||| ||||||| ||| ||||||||| ||||    
T  54424038 caagccatgaataatcatccacaacgtcacttagcaataacaacatcaattg 54424089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 6 - 660
Target Start/End: Complemental strand, 11061823 - 11061176
Alignment:
Q  6 gacatcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagc 105  Q
    |||| ||||||||||||||| |  ||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||| || | ||| |||||    
T  11061823 gacagcatcagattttcaacattcacgttttcgcgcataaaaatcaaaccgttaatccgttttcgacaccgttttcacctacatgttcatgacacttagc 11061724  T
Q  106 agtatcataatgcacagaaaaatcccagtttcaacaacctcaaattcattttac-aagcctcacacaaacactca-ttttccaaaacggttaacaaatga 203  Q
      |||| ||||| |||||||||| | || |||||||||| |||||||||||| | |||||| ||||||| | ||| ||||||||| |||||||||| |||    
T  11061723 tctatcttaatgtacagaaaaattcaag-ttcaacaaccccaaattcattttccaaagccttacacaaaaaatcatttttccaaagcggttaacaattga 11061625  T
Q  204 attttcaaacgaaactcccgttttctcccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaacc 303  Q
    |||||||  ||||||||||| |||||||| ||||||||||||||||| ||| ||     ||||||||| |||||||||||||||||||||||||||||||    
T  11061624 attttcacccgaaactcccgatttctccc-aaacgactcgactatcacaactac----aacataaaaacagaaattccatcaagtttaactcatccaacc 11061530  T
Q  304 acataggcaactcaatcaacaactttgtatatcaaatttcatttt-ggtgcttcacatgaccatctagcacaattttaccaatacaaacaacnnnnnnnn 402  Q
    || | | ||||||  |||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||| || || |||||| |||||            
T  11061529 acgtcgacaactccgtcaacaactttgtatatcaaatttcattttgggtccttcacatgaacatctagcacaacttcactaatacagacaac-------a 11061437  T
Q  403 ncttcataaaatggaatatccatgatatcatt---caacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaac 499  Q
     ||||||||||||||||| | ||| ||| |||   |||||||||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  11061436 acttcataaaatggaatacctatggtataattcaacaacaacaacaacatatctaattcaaaaacacttcatttagacataaattcaaccataattcaac 11061337  T
Q  500 aacacaatatccaaatccaacaa-ttgagtaaaactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaat 598  Q
    ||||||||||   |||||||||| ||||| ||||||||||||||| | ||||||| ||| ||||||||| || |||||||||| || | |||| ||||||    
T  11061336 aacacaatatttcaatccaacaatttgagcaaaactcataagtacccattttcaccaaatcaacaacaataacttatttcacatcatc-aaatcatgaat 11061238  T
Q  599 catgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
     ||| | ||||||||||||||| | || | | || |||||||| || |||||||||| ||||    
T  11061237 tatgaacacccaagccatgaatcatcaacaacaatatcacttagcaccaacaacatcaattg 11061176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 245; E-Value: 1e-135
Query Start/End: Original strand, 11 - 542
Target Start/End: Complemental strand, 13327182 - 13326640
Alignment:
Q  11 catcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtat 110  Q
    ||||| ||||||||| |  |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| || |||| ||| ||||   |||    
T  13327182 catcaaattttcaaccttcacgttttcgcacataaaaatcaaaccgttaaactgttttcgatgccgttttcacctacttgttcctgacacttagacctat 13327083  T
Q  111 cataatgcacagaaaaatcccagtttcaacaacctcaaattcattttacaagcctcacacaaacactcattttccaaaacggttaacaaatgaattttca 210  Q
    ||||||||| | |||||| | ||||| ||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  13327082 cataatgcataaaaaaattcaagttttaacaaccccaaattcattttacaaacctcacacaaacactcattttccaaaatggttaacaattgaattttca 13326983  T
Q  211 aacgaaactcccgttttctcccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaaccacatagg 310  Q
     ||||||||||| |||||||||||| |||||||||||||||||| || |||||    |||| |||||||||||||||||||| ||||||||| |||| |     
T  13326982 cacgaaactcccattttctcccaaa-cgactcgactatcataactacaacata----aaaacagaaattccatcaagtttaagtcatccaacaacatcga 13326888  T
Q  311 caactcaatcaacaactttgtatatcaaatttcattttgg-tgcttcacatgaccatctagcacaattttaccaatacaaacaa--------------cn 395  Q
    ||| |||||||||||||||||||||||||||||| ||||| | |||||||||| |||||||||||| |||| ||||||||||||              |     
T  13326887 caattcaatcaacaactttgtatatcaaatttcactttgggtccttcacatgaacatctagcacaactttagcaatacaaacaacaacttcacaaattca 13326788  T
Q  396 nnnnnnnncttcataaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataatt 495  Q
            |||||| |||||||||| ||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  13326787 aacaacaacttcatgaaatggaatacccatggtataattcaacaacaacaacatatctaattcaacaacacttcatttagacatgaattcaaccataatt 13326688  T
Q  496 caacaacacaatatccaaatccaacaa-ttgagtaaaactcataagta 542  Q
    |||||||||||||||  ||| || ||| ||||| ||||||||||||||    
T  13326687 caacaacacaatatcacaattcatcaatttgagcaaaactcataagta 13326640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 235; E-Value: 1e-129
Query Start/End: Original strand, 6 - 394
Target Start/End: Complemental strand, 51961783 - 51961398
Alignment:
Q  6 gacatcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagc 105  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||  |||||||||||||  ||| |    
T  51961783 gacaacatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatccgttttcgacgccgttttcactcacatgctcctaactcttaac 51961684  T
Q  106 agtatcataatgcacagaaaaatcccagtttcaacaacctcaaattcattttacaagcctcacacaaacactcattttccaaaacggttaacaaatgaat 205  Q
    | ||||||||||||||||||||||||| ||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  51961683 actatcataatgcacagaaaaatcccaatttcaacaacc-ccaattcattttacaaacctcacacaaacactcattttccaaaacggttaacaattgaat 51961585  T
Q  206 tttcaaacgaaactcccgttttctcccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaaccac 305  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||| || |     ||||||||| ||||||||||||||| |||||||||||||| ||    
T  51961584 tttcaaacgaaactctcgttttctcccaaaatgactcgactatcatatcctc----aacataaaaacagaaattccatcaaggttaactcatccaacaac 51961489  T
Q  306 ataggcaactcaatcaacaactttgtatatcaaatttcatttt--ggtgcttcacatgaccatctagcacaattttaccaatacaaacaac 394  Q
    || | ||||||| ||||||||||||||||||||||||||||||  ||| |||||||||| |||||| ||||| || ||||| |||||||||    
T  51961488 atcgacaactcagtcaacaactttgtatatcaaatttcatttttgggtccttcacatgaacatctaacacaacttcaccaacacaaacaac 51961398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 11 - 553
Target Start/End: Complemental strand, 11882860 - 11882308
Alignment:
Q  11 catcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtat 110  Q
    ||||| ||||||||| |  |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||| ||| ||| |  |||    
T  11882860 catcatattttcaaccttcacgttttcgcgcataaaaatcaaaccgttaatctgttttcaatgccgttttcacctacttgttcctgacacttacccctat 11882761  T
Q  111 cataatgcacagaaaaatcccagtttcaacaacctc-aaattcattttacaagcctcacacaaacactcattttccaaaacggttaacaaatgaattttc 209  Q
    |||||||||||||||||| | ||||| ||||||| | |||||||||||| || |||||| |||||||||||||||||||||||||| ||| ||||||||     
T  11882760 cataatgcacagaaaaattcaagttttaacaacccccaaattcattttataaacctcactcaaacactcattttccaaaacggtta-caattgaatttta 11882662  T
Q  210 aaacgaaactcccgttttctcccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaaccacatag 309  Q
    | |||||||||||| ||||||||||| |||||||||||||| ||| || |||||    |||| |||||||||||||||||||||||||||||| |||| |    
T  11882661 acacgaaactcccgatttctcccaaa-cgactcgactatcacaactacaacata----aaaacagaaattccatcaagtttaactcatccaacaacatcg 11882567  T
Q  310 gcaactcaatcaacaactttgtatatcaaatttcattttggtgc-ttcacatgaccatctagcacaattttaccaatacaaacaa--------------c 394  Q
     ||||||| |||||||||||||||||||||||||| |||||  | ||||||||| |||||| ||||| || ||||| ||||||||              |    
T  11882566 acaactcagtcaacaactttgtatatcaaatttcactttgggtcgttcacatgaacatctaacacaacttcaccaacacaaacaacaacttgacaaattc 11882467  T
Q  395 nnnnnnnnncttcataaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataat 494  Q
             |||||| |||||| ||| ||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  11882466 aaacaacaacttcatgaaatgggatacccatggtataattcaacaacaacaacatatctaattcaacaacacttcatttagacatgaattcaaccataat 11882367  T
Q  495 tcaacaacacaatatccaaatccaacaattgagtaaaactcataagtactccttttcac 553  Q
    |||||||| |||||||  ||| || |||||  | ||||||| ||||||| | |||||||    
T  11882366 tcaacaacgcaatatctcaattcatcaatttggcaaaactcgtaagtacccattttcac 11882308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 167; E-Value: 4e-89
Query Start/End: Original strand, 405 - 660
Target Start/End: Complemental strand, 19261261 - 19261009
Alignment:
Q  405 ttcataaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacac 504  Q
    |||||||||||| ||  ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  19261261 ttcataaaatgggatgcccatgatatcattcaacaacaacaacatatctatttcaacaacacttcatttagacatgaattcaaccataattcaacaacac 19261162  T
Q  505 aatatccaaatccaacaa-ttgagtaaaactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgc 603  Q
    ||||| | |||||||||| ||||| ||||||||||||||| | ||||||| |||| |||||||||   |||||||| |||||| ||||||||||||||||    
T  19261161 aatattccaatccaacaatttgagcaaaactcataagtacccattttcaccaaactaacaacaac---ttatttcataacaac-aaattatgaatcatgc 19261066  T
Q  604 atacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||    
T  19261065 atacccaagccatgaattaacattcataacatcatttaacaacaacaacatctattg 19261009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 404 - 653
Target Start/End: Original strand, 45581453 - 45581701
Alignment:
Q  404 cttcataaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaaca 503  Q
    ||||| ||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||    
T  45581453 cttcacaaaatggaatacctatgatatcattcaacaacaacaacatatctaattcaacaacacttcatttagacatgaattcaaccataattcaacagca 45581552  T
Q  504 caatatccaaatccaacaattgagtaaaactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgc 603  Q
    |||||||| ||||||||||||||| |||| |||||||||| | ||||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  45581553 caatatcccaatccaacaattgagcaaaattcataagtacccattttcaccaaaccaacaacaacaatttatttctcaacaac-aaattatgaatcatgc 45581651  T
Q  604 atacccaagccatgaattagcatccataacatcacttaacaacaacaaca 653  Q
    ||||||||||||||||||| |||| |  | || ||| |||||||||||||    
T  45581652 atacccaagccatgaattatcatcaaccatatgactaaacaacaacaaca 45581701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 404 - 653
Target Start/End: Complemental strand, 54038557 - 54038309
Alignment:
Q  404 cttcataaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaaca 503  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  54038557 cttcacaaaatggaatacccatgatatcattcaacaacaacaacatatctaattcaacaacacttcatttagacatgaatttaaccataattcaacaaca 54038458  T
Q  504 caatatccaaatccaacaattgagtaaaactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgc 603  Q
    |||||||| ||||||||||||||| ||||||||||||||  | ||||||| ||||||||||||||||||||||||  |||||| ||||||||||||||||    
T  54038457 caatatcccaatccaacaattgagcaaaactcataagtatccattttcaccaaaccaacaacaacaatttatttcttaacaac-aaattatgaatcatgc 54038359  T
Q  604 atacccaagccatgaattagcatccataacatcacttaacaacaacaaca 653  Q
    ||||||||||||||||||| |||| |  | || ||| |||||||||||||    
T  54038358 atacccaagccatgaattatcatcaactatatgactaaacaacaacaaca 54038309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 404 - 627
Target Start/End: Original strand, 28558028 - 28558250
Alignment:
Q  404 cttcataaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaaca 503  Q
    ||||| |||||||||||  |||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  28558028 cttcacaaaatggaatacacatggtataattcaacaacaacaacatatctatttcaacaacacttcatttagacatgaattcaaccataattcaacaaca 28558127  T
Q  504 caatatccaaatccaacaattgagtaaaactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgc 603  Q
     ||||||  ||||||||||||||| ||||||||||||||||| ||||||| |||| ||||||||||||||||||| ||||||| ||||||||||||||||    
T  28558128 taatatctcaatccaacaattgagcaaaactcataagtactcattttcaccaaacaaacaacaacaatttatttctcaacaac-aaattatgaatcatgc 28558226  T
Q  604 atacccaagccatgaattagcatc 627  Q
    ||||||||||||||||||| ||||    
T  28558227 atacccaagccatgaattatcatc 28558250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 483 - 660
Target Start/End: Original strand, 17101237 - 17101415
Alignment:
Q  483 ttcaaccataattcaacaacacaatatccaaatccaacaatt-gagtaaaactcataagtactccttttcactaaaccaacaa-caacaatttatttcac 580  Q
    ||||||||||||||||| ||||||||||| |||||||||||| ||| ||||||||||||||  | ||||||| |||||||||  |||||| |||||||||    
T  17101237 ttcaaccataattcaaccacacaatatcccaatccaacaatttgagcaaaactcataagtatccattttcaccaaaccaacattcaacaacttatttcac 17101336  T
Q  581 aacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||    
T  17101337 aacaacaaa-ttatgaatcatgcatacccaagccatgaattaacatccataacatcacttaacaacaataacatcaattg 17101415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 18910600 - 18910696
Alignment:
Q  20 ttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataat 116  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| || ||| |||||||||    
T  18910600 ttcaacttctacgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcgcctacatgctcctaacacttggcactatcataat 18910696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 17 - 149
Target Start/End: Original strand, 14818700 - 14818832
Alignment:
Q  17 attttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataat 116  Q
    ||||||||| |  |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| ||| |||||  |||||||||    
T  14818700 attttcaaccttcacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccattttcacctacatgttcctgacacttagccctatcataat 14818799  T
Q  117 gcacagaaaaatcccagtttcaacaacctcaaa 149  Q
      ||| ||| || | ||||||||| ||| ||||    
T  14818800 atacataaagattcaagtttcaaccaccccaaa 14818832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 13 - 140
Target Start/End: Complemental strand, 29172289 - 29172162
Alignment:
Q  13 tcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatca 112  Q
    ||||||||||||| |  |||||||||| |||||||||||||||||||| | |||||||||||||||||| |||| | |||||| ||| |||||  |||||    
T  29172289 tcagattttcaaccttcacgttttcgcacataaaaatcaaaccgttaacccgttttcgatgccgttttcgcctaaacgctcctgacacttagctctatca 29172190  T
Q  113 taatgcacagaaaaatcccagtttcaac 140  Q
    ||||  |||||||||| | |||||||||    
T  29172189 taatctacagaaaaattcaagtttcaac 29172162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 30 - 128
Target Start/End: Complemental strand, 45531028 - 45530930
Alignment:
Q  30 acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataatgcacagaaaaat 128  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |||| ||| || ||  |||||||||  ||||||||||    
T  45531028 acgttttcgctcataaaaatcaaaccgttaatctgttttcgataccgttttcacctacatgttcctgacacttggccctatcataatctacagaaaaat 45530930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 13 - 140
Target Start/End: Original strand, 13511677 - 13511804
Alignment:
Q  13 tcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatca 112  Q
    ||||||||||||| |  |||||||| |||||||||| ||||||||||| | |||||||||||||||||| |||||| |||||| | | |||||  |||||    
T  13511677 tcagattttcaaccttcacgttttcccgcataaaaaccaaaccgttaacccgttttcgatgccgttttctcctacacgctcctgaaacttagctctatca 13511776  T
Q  113 taatgcacagaaaaatcccagtttcaac 140  Q
    ||||  |||||||||| | |||||||||    
T  13511777 taatctacagaaaaattcaagtttcaac 13511804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 30 - 105
Target Start/End: Original strand, 20417787 - 20417862
Alignment:
Q  30 acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagc 105  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||| ||| |||||    
T  20417787 acgttttcgcgcataaaaatcaaactgttaatctattttcgatgccgttttcacctacatgttcctgacacttagc 20417862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 6 - 140
Target Start/End: Original strand, 10550908 - 10551042
Alignment:
Q  6 gacatcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagc 105  Q
    |||| ||||||||||||| | |  |||||||||||| ||||||| |||||||||||| |||||||||||||||||| |||||  |||||||||| |||||    
T  10550908 gacagcatcagattttcacccttcacgttttcgcgcctaaaaataaaaccgttaatccgttttcgatgccgttttcgcctacgcgctcctaacacttagc 10551007  T
Q  106 agtatcataatgcacagaaaaatcccagtttcaac 140  Q
      ||||| |||  ||| |||||  |||||||||||    
T  10551008 tctatcacaatatacaaaaaaaatccagtttcaac 10551042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 6 - 140
Target Start/End: Original strand, 36167135 - 36167269
Alignment:
Q  6 gacatcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagc 105  Q
    |||| ||||||||||||| | |  |||||||||||| |||||||||||||||||| | |||||||||||||||||| |||||  |||||| ||| |||||    
T  36167135 gacagcatcagattttcacccttcacgttttcgcgcctaaaaatcaaaccgttaacccgttttcgatgccgttttcgcctacgcgctcctgacacttagc 36167234  T
Q  106 agtatcataatgcacagaaaaatcccagtttcaac 140  Q
      ||||| |||  ||||||| || |||||||||||    
T  36167235 tctatcacaatctacagaaagattccagtttcaac 36167269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 182 - 239
Target Start/End: Complemental strand, 9303561 - 9303504
Alignment:
Q  182 ttccaaaacggttaacaaatgaattttcaaacgaaactcccgttttctcccaaaacga 239  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9303561 ttccaaagcggttaacaaatgaattttcaaacgaaactcccgttttctcccaaaacga 9303504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 13 - 140
Target Start/End: Original strand, 12158894 - 12159020
Alignment:
Q  13 tcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatca 112  Q
    ||||||||||||| |  ||||||||||||||||||||||||||||||| | |||||||||||| ||||| |||||| ||| || ||| ||| |  |||||    
T  12158894 tcagattttcaaccttcacgttttcgcgcataaaaatcaaaccgttaacccgttttcgatgccattttcgcctacacgct-ctgacacttaactctatca 12158992  T
Q  113 taatgcacagaaaaatcccagtttcaac 140  Q
    ||||  |||||||||| | |||||||||    
T  12158993 taatttacagaaaaattcaagtttcaac 12159020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 6 - 247
Target Start/End: Original strand, 15517258 - 15517499
Alignment:
Q  6 gacatcatcagattttcaacttct-acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattag 104  Q
    |||| |||||||||||| | || | |||||||||||| |||||  ||||||||||| | ||||| |||||||||||| |||||| |||||||||  ||||    
T  15517258 gacaacatcagattttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgtttttgatgccgttttcgcctacacgctcctaactcttag 15517357  T
Q  105 cagtatcataatgcacagaaaaatcccagtttcaacaacctcaaattc-attttacaagcctcacacaaacactcattttccaaaacggttaacaaatga 203  Q
    |  |||||||||  |||||||||| | ||||||||| |||  ||| || |||||  || ||||||| || |||| | ||| ||||||| |||   | |||    
T  15517358 ctctatcataatctacagaaaaattcaagtttcaactacccaaaaatcaattttcaaaacctcacataatcactta-tttgcaaaacgtttagacactga 15517456  T
Q  204 attttcaaacgaaactcccgttttctcccaaaacgactcgacta 247  Q
     ||||||| ||||| || ||||||||||| ||||||||||||||    
T  15517457 cttttcaagcgaaaatctcgttttctccc-aaacgactcgacta 15517499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 13 - 116
Target Start/End: Complemental strand, 37641935 - 37641832
Alignment:
Q  13 tcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatca 112  Q
    ||||||||||||| |  |||||||||| |||||||| ||||||||||| | |||||||||||||||||| |||||| |||||| ||| |||||  |||||    
T  37641935 tcagattttcaaccttcacgttttcgctcataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctacacgctcctgacacttagctctatca 37641836  T
Q  113 taat 116  Q
    ||||    
T  37641835 taat 37641832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 574 - 660
Target Start/End: Original strand, 17139500 - 17139585
Alignment:
Q  574 atttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    ||||| |||||||||| | |||||||||||||||||||||||||||||| |||| | ||||||||||| ||||||||||||| ||||    
T  17139500 atttcgcaacaacaaa-tcatgaatcatgcatacccaagccatgaattatcatcaacaacatcacttagcaacaacaacatcaattg 17139585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 6 - 140
Target Start/End: Original strand, 21618986 - 21619120
Alignment:
Q  6 gacatcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagc 105  Q
    |||| ||||||||||||| | |  |||||||||||| |||||||||||||||||| | |||||||||||||||||| |||||  |||||| ||| ||| |    
T  21618986 gacagcatcagattttcacccttcacgttttcgcgcctaaaaatcaaaccgttaacccgttttcgatgccgttttcgcctacgcgctcctgacacttaac 21619085  T
Q  106 agtatcataatgcacagaaaaatcccagtttcaac 140  Q
      ||||| |||  ||||||||||  ||||||||||    
T  21619086 tctatcacaatctacagaaaaattacagtttcaac 21619120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 555 - 660
Target Start/End: Complemental strand, 14528286 - 14528182
Alignment:
Q  555 aaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacat 654  Q
    |||||| ||||||||  | ||||| |||||||||| | ||||||||| |||||||||||||||||||| |||| | ||||||||||| ||||||||||||    
T  14528286 aaaccaccaacaacatctcatttctcaacaacaaa-tcatgaatcattcatacccaagccatgaattaccatcaacaacatcacttagcaacaacaacat 14528188  T
Q  655 ctattg 660  Q
    | ||||    
T  14528187 caattg 14528182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 588 - 660
Target Start/End: Complemental strand, 11329203 - 11329131
Alignment:
Q  588 aaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||| |||||||||||||||||||||||||||||| |||| | ||||||||||| ||||||||||||| ||||    
T  11329203 aaatcatgaatcatgcatacccaagccatgaattatcatcaacaacatcacttagcaacaacaacatcaattg 11329131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 588 - 660
Target Start/End: Complemental strand, 12560478 - 12560406
Alignment:
Q  588 aaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||| ||||||||||||||||||||||| |||||| |||||| ||||||||||| ||||||||||||| ||||    
T  12560478 aaatcatgaatcatgcatacccaagccaggaattaacatccacaacatcacttagcaacaacaacatccattg 12560406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 6 - 140
Target Start/End: Original strand, 12536256 - 12536391
Alignment:
Q  6 gacatcatcagattttcaacttct-acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattag 104  Q
    |||| |||||||||||||| || | |||||||| ||| |||||  ||||||||||| | |||||||||| ||||||| |||||| |||||| ||| ||||    
T  12536256 gacaacatcagattttcaaattttcacgttttctcgcgtaaaatccaaaccgttaacccgttttcgatgtcgttttcgcctacacgctcctgacacttag 12536355  T
Q  105 cagtatcataatgcacagaaaaatcccagtttcaac 140  Q
    |  |||||||||  |||||||||| | |||||||||    
T  12536356 ctctatcataatctacagaaaaattcaagtttcaac 12536391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 13 - 116
Target Start/End: Complemental strand, 22147197 - 22147094
Alignment:
Q  13 tcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatca 112  Q
    ||||||||||||| |  |||||||||| |||||||| ||||||||||| | |||||||||||||||||| |||| | |||||| ||| |||||  |||||    
T  22147197 tcagattttcaaccttcacgttttcgctcataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctaaacgctcctgacacttagccctatca 22147098  T
Q  113 taat 116  Q
    ||||    
T  22147097 taat 22147094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 13 - 116
Target Start/End: Complemental strand, 24340382 - 24340279
Alignment:
Q  13 tcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatca 112  Q
    ||||||||||||| |  ||||||| |  |||||||||||||||||||| | |||||||||||||||||| |||||| |||||| ||| |||||  |||||    
T  24340382 tcagattttcaaccttcacgtttttgaacataaaaatcaaaccgttaacccgttttcgatgccgttttcgcctacacgctcctgacacttagccctatca 24340283  T
Q  113 taat 116  Q
    ||||    
T  24340282 taat 24340279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 34851745 - 34851623
Alignment:
Q  6 gacatcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagc 105  Q
    |||| |||||||||||| | ||  |||||||| ||| |||||  ||||||||||| | |||||||||||||||||| |||||| |||||| ||| |||||    
T  34851745 gacaacatcagattttctaatttcacgttttcacgcgtaaaatccaaaccgttaacccgttttcgatgccgttttcgcctacacgctcctgacacttagc 34851646  T
Q  106 agtatcataatgcacagaaaaat 128  Q
      |||||||||  ||||||||||    
T  34851645 tctatcataatctacagaaaaat 34851623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 547 - 660
Target Start/End: Complemental strand, 12489008 - 12488896
Alignment:
Q  547 ttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaac 646  Q
    ||||||| |||||||||||||||| ||||||| || ||  ||| | |||||| ||| | ||||||||||||||||| |||| | ||||||||||| ||||    
T  12489008 ttttcaccaaaccaacaacaacaacttatttcccatcattaaa-tcatgaattatgaacacccaagccatgaattatcatcaacaacatcacttagcaac 12488910  T
Q  647 aacaacatctattg 660  Q
    ||||||||| ||||    
T  12488909 aacaacatcaattg 12488896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 547 - 660
Target Start/End: Original strand, 14295403 - 14295515
Alignment:
Q  547 ttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaac 646  Q
    ||||||| ||| || ||||||||  | ||||| |||||||||| | |||||||||||| ||||||||||||||||| |||| | |||||||||||  |||    
T  14295403 ttttcaccaaaacaccaacaacatctcatttctcaacaacaaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatcacttagaaac 14295501  T
Q  647 aacaacatctattg 660  Q
    ||||||||| ||||    
T  14295502 aacaacatcaattg 14295515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 547 - 660
Target Start/End: Complemental strand, 55441131 - 55441019
Alignment:
Q  547 ttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaac 646  Q
    ||||||| |||||| ||||||||  | ||||| |||||| ||||| |||||| ||||||||||||| ||||||||| |||| | ||||||||||| || |    
T  55441131 ttttcaccaaaccaccaacaacatctcatttctcaacaa-aaaatcatgaattatgcatacccaagtcatgaattatcatcaacaacatcacttagcatc 55441033  T
Q  647 aacaacatctattg 660  Q
    ||||||||| ||||    
T  55441032 aacaacatcaattg 55441019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 52338390 - 52338323
Alignment:
Q  13 tcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgtttt 80  Q
    ||||||||||||| |  |||||||||| |||||||||||||||||||| | |||||||||||||||||    
T  52338390 tcagattttcaaccttcacgttttcgcacataaaaatcaaaccgttaacccgttttcgatgccgtttt 52338323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 584 - 653
Target Start/End: Complemental strand, 12349975 - 12349907
Alignment:
Q  584 aacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaaca 653  Q
    |||||||| |||||||||||| ||||||||||||||||| |||| | ||||| |||||||||||||||||    
T  12349975 aacaaaatcatgaatcatgca-acccaagccatgaattatcatcaacaacatgacttaacaacaacaaca 12349907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 585 - 653
Target Start/End: Complemental strand, 6154575 - 6154508
Alignment:
Q  585 acaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaaca 653  Q
    |||||||||||||||||||| ||||||||||||||||| |||| | ||||| ||||||||| |||||||    
T  6154575 acaaaattatgaatcatgca-acccaagccatgaattatcatcaacaacatgacttaacaataacaaca 6154508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 93
Target Start/End: Complemental strand, 13968243 - 13968156
Alignment:
Q  6 gacatcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctc 93  Q
    |||| |||||||||||| || |  |||||||||||| |||||| | ||||||||| | |||||||||||||||||| |||||| ||||    
T  13968243 gacagcatcagattttcgaccttcacgttttcgcgcgtaaaaacccaaccgttaacccgttttcgatgccgttttcgcctacacgctc 13968156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 93
Target Start/End: Complemental strand, 13973718 - 13973631
Alignment:
Q  6 gacatcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctc 93  Q
    |||| |||||||||||| || |  |||||||||||| |||||| | ||||||||| | |||||||||||||||||| |||||| ||||    
T  13973718 gacagcatcagattttcgaccttcacgttttcgcgcgtaaaaacccaaccgttaacccgttttcgatgccgttttcgcctacacgctc 13973631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 593 - 660
Target Start/End: Original strand, 16880133 - 16880200
Alignment:
Q  593 atgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||||| ||||| ||||||||||||||||| |||||| ||||||||||| |||||| |||||| ||||    
T  16880133 atgaattatgcacacccaagccatgaattatcatccacaacatcacttagcaacaataacatcaattg 16880200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 140
Target Start/End: Complemental strand, 17547914 - 17547779
Alignment:
Q  6 gacatcatcagattttcaacttct-acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattag 104  Q
    |||| |||||||||||| | || | |||||||||||| |||||  ||||||||||| |  ||||||||| ||||||| |||||| |||||| ||| ||||    
T  17547914 gacaacatcagattttctaattttcacgttttcgcgcgtaaaatccaaaccgttaacccattttcgatgtcgttttcgcctacacgctcctgacacttag 17547815  T
Q  105 cagtatcataatgcacagaaaaatcccagtttcaac 140  Q
    |  |||||| ||  |||||||||| | |||||||||    
T  17547814 ccttatcattatctacagaaaaattcaagtttcaac 17547779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 116
Target Start/End: Complemental strand, 23395460 - 23395349
Alignment:
Q  6 gacatcatcagattttcaacttct-acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattag 104  Q
    |||| |||||||||||| | || | |||||||||||| |||||  ||||| ||||| | |||||||||||||||||| |||||| |||||| ||| ||||    
T  23395460 gacaacatcagattttctaattttcacgttttcgcgcgtaaaatccaaactgttaacccgttttcgatgccgttttcgcctacacgctcctgacacttag 23395361  T
Q  105 cagtatcataat 116  Q
    |  |||||||||    
T  23395360 ctctatcataat 23395349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 404 - 486
Target Start/End: Complemental strand, 40039172 - 40039089
Alignment:
Q  404 cttcataaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaac-acttcatttagacatgaattca 486  Q
    ||||| |||||||||||  |||||||  | ||||||||||||||||||||| ||||||||| |||| ||||| |||||||||||    
T  40039172 cttcacaaaatggaatactcatgatacaaatcaacaacaacaacatatctaattcaacaacaactttatttaaacatgaattca 40039089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 410 - 503
Target Start/End: Original strand, 15517644 - 15517736
Alignment:
Q  410 aaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaaca-cttcatttagacatgaattcaaccataattcaacaaca 503  Q
    |||||||||||||||||  | || ||||||||||||||||||| | |||||||| | ||||||| | |||||||||||||||||| |||||||||    
T  15517644 aaaatggaatatccatggaa-caatcaacaacaacaacatatccaattcaacaaaaacttcattaa-acatgaattcaaccataaatcaacaaca 15517736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 555 - 660
Target Start/End: Original strand, 19946672 - 19946775
Alignment:
Q  555 aaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacat 654  Q
    |||||| ||||||||| | ||||| |||||||||  | |||||||||||| |||||||||||| |||| |||| | ||||| || || ||||||||||||    
T  19946672 aaaccaccaacaacaactcatttctcaacaacaa--tcatgaatcatgcaaacccaagccatggattatcatcaacaacatgacatatcaacaacaacat 19946769  T
Q  655 ctattg 660  Q
    | ||||    
T  19946770 caattg 19946775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 19430553 - 19430614
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcct 95  Q
    |||||||| ||||| ||||||||||||| ||||||||||||||||||| | |||| ||||||    
T  19430553 tttcgcgcgtaaaattcaaaccgttaatttgttttcgatgccgttttcgcgtacacgctcct 19430614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 6 - 140
Target Start/End: Complemental strand, 11850039 - 11849904
Alignment:
Q  6 gacatcatcagattttcaacttct-acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattag 104  Q
    |||| |||||||||||| | || | |||||||||||| ||| |  ||||||||||| | ||||||||| |||||||| |||||  ||| || ||| ||||    
T  11850039 gacaacatcagattttctaattttcacgttttcgcgcgtaagatccaaaccgttaacccgttttcgataccgttttcgcctacgcgcttctgacacttag 11849940  T
Q  105 cagtatcataatgcacagaaaaatcccagtttcaac 140  Q
    |  |||||||||  |||||||||| | |||||||||    
T  11849939 ctctatcataatctacagaaaaattcaagtttcaac 11849904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 555 - 653
Target Start/End: Original strand, 33341855 - 33341951
Alignment:
Q  555 aaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaaca 653  Q
    |||||| ||||||||| | ||||| |||||||||  | |||||||||||| ||||||||||||||||| |||| |  | || ||| |||||||||||||    
T  33341855 aaaccaccaacaacaactcatttctcaacaacaa--tcatgaatcatgcaaacccaagccatgaattatcatcaaccatatgactaaacaacaacaaca 33341951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 593 - 660
Target Start/End: Complemental strand, 38811245 - 38811178
Alignment:
Q  593 atgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||||| ||||| ||||||||||||||| | |||| | ||||||||||| ||||||||||||| ||||    
T  38811245 atgaattatgcacacccaagccatgaatcatcatcaacaacatcacttagcaacaacaacatcaattg 38811178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 593 - 660
Target Start/End: Complemental strand, 50112288 - 50112221
Alignment:
Q  593 atgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||||||||||| || |||||||||||||| |||| | ||||| ||| ||||||||||||||| ||||    
T  50112288 atgaatcatgcaaactcaagccatgaattatcatcaacaacatgactaaacaacaacaacatcaattg 50112221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 128
Target Start/End: Original strand, 20188356 - 20188454
Alignment:
Q  30 acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataatgcacagaaaaat 128  Q
    |||||||||||| |||||  |||||| |||| | |||||||||||||||||| |||||  | |||| ||| |||||  |||||||||  ||||||||||    
T  20188356 acgttttcgcgcgtaaaatccaaaccattaacccgttttcgatgccgttttcgcctacgcgttcctgacacttagctctatcataatctacagaaaaat 20188454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 169
Target Start/End: Complemental strand, 52212817 - 52212711
Alignment:
Q  64 gttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataatgcacagaaaaatcccagtttcaacaacctcaaattc-attttacaag 162  Q
    ||||||||||||||||||| ||||||| |||| ||| |||||  |||||||||  ||||||| || | ||||||||| ||| |||| || ||||  ||||    
T  52212817 gttttcgatgccgttttcatctacatgttcctgacacttagccctatcataatctacagaaagattcaagtttcaaccaccccaaaatcgatttcccaag 52212718  T
Q  163 cctcaca 169  Q
    |||||||    
T  52212717 cctcaca 52212711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 95
Target Start/End: Complemental strand, 1468378 - 1468317
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcct 95  Q
    |||||||| |||||  ||||||||||||| | ||| ||||||||||||||||||||| ||||    
T  1468378 tttcgcgcgtaaaatgcaaaccgttaatcggattttgatgccgttttcacctacatgatcct 1468317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 547 - 660
Target Start/End: Original strand, 14301030 - 14301142
Alignment:
Q  547 ttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaac 646  Q
    ||||||| ||| || ||||||||  | ||||| |||||||||||  |||||||||||| ||| ||| ||||||| | |||| | |||||||||||  |||    
T  14301030 ttttcaccaaaacaccaacaacatctcatttctcaacaacaaaac-atgaatcatgcaaaccaaagacatgaataatcatcaacaacatcacttagaaac 14301128  T
Q  647 aacaacatctattg 660  Q
    ||||||||| ||||    
T  14301129 aacaacatcaattg 14301142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 548 - 653
Target Start/End: Complemental strand, 17956273 - 17956169
Alignment:
Q  548 tttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaaca 647  Q
    |||||| |||||| ||||||||||  ||||| |||||||||| | |||||||||||| ||||||| |||| || | |||| | || || ||| |||||||    
T  17956273 tttcacaaaaccaccaacaacaatccatttctcaacaacaaa-tcatgaatcatgcaaacccaagtcatgtatcatcatcaacaatatgactaaacaaca 17956175  T
Q  648 acaaca 653  Q
    ||||||    
T  17956174 acaaca 17956169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 28557666 - 28557727
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcct 95  Q
    |||||||| ||||| |||||||||||||| | ||| |||||||||||| |||||| ||||||    
T  28557666 tttcgcgcgtaaaattcaaaccgttaatcggattttgatgccgttttcgcctacacgctcct 28557727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 37038681 - 37038742
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcct 95  Q
    |||||||| ||||| |||||||||||||| | ||| |||||||||||| |||||| ||||||    
T  37038681 tttcgcgcgtaaaattcaaaccgttaatcggattttgatgccgttttcgcctacacgctcct 37038742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 95
Target Start/End: Complemental strand, 54038917 - 54038856
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcct 95  Q
    |||||||| ||||| |||||||||||||| | ||| |||||||||||| |||||| ||||||    
T  54038917 tttcgcgcgtaaaattcaaaccgttaatcggattttgatgccgttttcgcctacacgctcct 54038856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 593 - 653
Target Start/End: Complemental strand, 22144509 - 22144449
Alignment:
Q  593 atgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaaca 653  Q
    |||||||||||| |||||||||||| |||| |||| | |||||  ||||||||||||||||    
T  22144509 atgaatcatgcaaacccaagccatgtattatcatcaacaacatggcttaacaacaacaaca 22144449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 588 - 660
Target Start/End: Original strand, 35123701 - 35123773
Alignment:
Q  588 aaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||| |||||||||||| |||||| |||||||||| |||| | ||||| || || ||||||||||||| ||||    
T  35123701 aaatcatgaatcatgcaaacccaaaccatgaattatcatcaacaacatgacatatcaacaacaacatcaattg 35123773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 555 - 653
Target Start/End: Original strand, 7853956 - 7854052
Alignment:
Q  555 aaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaaca 653  Q
    |||||| ||||||||| | ||||| |||||||||  | |||| ||||||| ||||||||||||||||| |||| |  | || ||| |||||||||||||    
T  7853956 aaaccaccaacaacaactcatttctcaacaacaa--tcatgattcatgcaaacccaagccatgaattatcatcaaccatatgactaaacaacaacaaca 7854052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 125
Target Start/End: Complemental strand, 9511336 - 9511245
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataatgcacagaaa 125  Q
    |||||||| ||||| | |||||||||||| | ||| ||| |||||||| |||||| |||||| ||| |||||  |||||||||  |||||||    
T  9511336 tttcgcgcgtaaaattgaaaccgttaatcggattttgattccgttttcgcctacacgctcctgacacttagctctatcataatctacagaaa 9511245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 125
Target Start/End: Complemental strand, 9519311 - 9519220
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataatgcacagaaa 125  Q
    |||||||| ||||| | |||||||||||| | ||| ||| |||||||| |||||| |||||| ||| |||||  |||||||||  |||||||    
T  9519311 tttcgcgcgtaaaattgaaaccgttaatcggattttgattccgttttcgcctacacgctcctgacacttagctctatcataatctacagaaa 9519220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 593 - 660
Target Start/End: Complemental strand, 14059450 - 14059383
Alignment:
Q  593 atgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||||| ||||| ||||||||||||||||| |||| | |||||||| || |||||| |||||| ||||    
T  14059450 atgaattatgcaaacccaagccatgaattatcatcaacaacatcacatagcaacaataacatcaattg 14059383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 125
Target Start/End: Complemental strand, 40039532 - 40039441
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataatgcacagaaa 125  Q
    |||||||||||||| ||||||||||||||   ||| ||||||| |||| || ||| |||||| ||| |||||  |||||||||  |||||||    
T  40039532 tttcgcgcataaaattcaaaccgttaatcaaattttgatgccgctttcgcccacacgctcctgacacttagctctatcataatctacagaaa 40039441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 34 - 88
Target Start/End: Original strand, 12808870 - 12808924
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctaca 88  Q
    |||||||| |||||  ||||||||||||| | ||| |||||||||||||||||||    
T  12808870 tttcgcgcgtaaaatgcaaaccgttaatcggattttgatgccgttttcacctaca 12808924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 595 - 653
Target Start/End: Original strand, 13817527 - 13817585
Alignment:
Q  595 gaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaaca 653  Q
    |||| ||||| ||||||||||||||||| |||| | ||||| ||| |||||||||||||    
T  13817527 gaattatgcaaacccaagccatgaattatcatcaacaacatgactaaacaacaacaaca 13817585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 34 - 88
Target Start/End: Complemental strand, 18366928 - 18366874
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctaca 88  Q
    |||||||| ||||| |||||||||||||| | ||| |||||||||||| ||||||    
T  18366928 tttcgcgcgtaaaattcaaaccgttaatcggattttgatgccgttttcgcctaca 18366874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 547 - 653
Target Start/End: Original strand, 30152907 - 30153012
Alignment:
Q  547 ttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaac 646  Q
    ||||||| ||| || ||||||||||  ||||| |||||||||| | |||||||||||| |||||||||||  || | |||| | || || ||| ||||||    
T  30152907 ttttcaccaaaacaccaacaacaatccatttctcaacaacaaa-tcatgaatcatgcaaacccaagccatatatcatcatcaacaatatgactaaacaac 30153005  T
Q  647 aacaaca 653  Q
    |||||||    
T  30153006 aacaaca 30153012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 585 - 650
Target Start/End: Complemental strand, 6146990 - 6146926
Alignment:
Q  585 acaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaaca 650  Q
    ||||||| |||||||||| | |||||||||||||||||  ||| | ||||| ||||||||||||||    
T  6146990 acaaaatcatgaatcatgaa-acccaagccatgaattattatcaacaacatgacttaacaacaaca 6146926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 594 - 655
Target Start/End: Original strand, 8631801 - 8631862
Alignment:
Q  594 tgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatc 655  Q
    ||||||||||| ||||||||||||||| | |||| | ||||| || || |||||||||||||    
T  8631801 tgaatcatgcaaacccaagccatgaatgatcatcaacaacatgacatatcaacaacaacatc 8631862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 95
Target Start/End: Complemental strand, 16934620 - 16934559
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcct 95  Q
    ||||||| |||||| |||||||||||||| | ||| || ||||||||| |||||| ||||||    
T  16934620 tttcgcgaataaaattcaaaccgttaatcggattttgacgccgttttcgcctacacgctcct 16934559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 562 - 655
Target Start/End: Complemental strand, 47785014 - 47784922
Alignment:
Q  562 caacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatc 655  Q
    ||||||||| | ||||| || ||||||| | |||||| ||| | ||||||||||||||| |  | | | |||||||||||||||||||||||||    
T  47785014 caacaacaactcatttctcaccaacaaa-tcatgaattatgaacacccaagccatgaatcattaacaacaacatcacttaacaacaacaacatc 47784922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 588 - 660
Target Start/End: Original strand, 14298426 - 14298498
Alignment:
Q  588 aaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||| |||||||||||| ||||||||||||||||| |||| | ||||| || ||  || ||||||||| ||||    
T  14298426 aaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatattaataacaacatcaattg 14298498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 588 - 660
Target Start/End: Original strand, 14304053 - 14304125
Alignment:
Q  588 aaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||| |||||||||||| ||||||||||||||||| |||| | ||||| || ||  || ||||||||| ||||    
T  14304053 aaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatattaataacaacatcaattg 14304125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 588 - 660
Target Start/End: Original strand, 15876073 - 15876145
Alignment:
Q  588 aaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||| |||||| ||| ||||| ||||||||||| | |||  | ||||||||||| ||||||||||||| ||||    
T  15876073 aaatcatgaattatgaatacctaagccatgaatcatcattaacaacatcacttaccaacaacaacatcaattg 15876145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 448; Significance: 0; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 448; E-Value: 0
Query Start/End: Original strand, 6 - 660
Target Start/End: Complemental strand, 21274870 - 21274227
Alignment:
Q  6 gacatcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagc 105  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||| |||||    
T  21274870 gacaacatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatccattttcgatgccgttttcgcctacatgctcctaacacttagc 21274771  T
Q  106 agtatcataatgcacagaaaaatcccagtttcaacaacctcaaattcattttacaagcctcacacaaacactcattttccaaaacggttaacaaatgaat 205  Q
    | ||||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  21274770 actatcacaatgcacagaaaaatctcagtttcaacaacctcaaattcattttacaaacctcacacaaacacttattttccaaaacggttaacaaatgaat 21274671  T
Q  206 tttcaaacgaaactcccgttttctcccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaaccac 305  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||     ||||||||| |||||||||||||||||||||||||||||||||    
T  21274670 tttcacacgaaactcccgttttctcccaaaacgactcgactatcataaccac----aacataaaaacagaaattccatcaagtttaactcatccaaccac 21274575  T
Q  306 ataggcaactcaatcaacaactttgtatatcaaatttca-ttttggtgcttcacatgaccatctagcacaattttaccaatacaaacaacnnnnnnnnnc 404  Q
    |||| ||||||| |||||||||||||||||||||||||| ||| ||| |||||| ||| |||||||||||| || |||||||||||||||              
T  21274574 atagacaactcagtcaacaactttgtatatcaaatttcactttgggttcttcacttgaacatctagcacaacttcaccaatacaaacaacttat------ 21274481  T
Q  405 ttcataaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacac 504  Q
    ||||||||||||||||  ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21274480 ttcataaaatggaatactcatgatatcattcaagaaccacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacac 21274381  T
Q  505 aatatccaaatccaacaattgagtaaaactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgca 604  Q
    ||||||| ||||||||||||||| ||||| ||||||||  | ||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||     
T  21274380 aatatcccaatccaacaattgagcaaaacacataagtatccattttcaccaaaccaacaac-acaacttatttcacaacaacaaaattatgaatcatgc- 21274283  T
Q  605 tacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21274282 tacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 21274227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 14 - 653
Target Start/End: Complemental strand, 36891490 - 36890862
Alignment:
Q  14 cagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcat 113  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||| || || | ||| |||||  |||| |    
T  36891490 cagattttcaacctctacgttttcgcgcataaaactcaaaccgttaatccattttcgatgccgttttcacctacgtgttcatgacacttagccctatctt 36891391  T
Q  114 aatgcacagaaaaatcccagtttcaacaacctcaaattcattttacaag-cctcacacaaacactcatttt-ccaaaacggttaacaaatgaattttcaa 211  Q
    |||| |||||||||| | ||||||||||||| ||| |||||||| |||| ||| |||||| |||||||||| |||||||||||||||| ||||||||||     
T  36891390 aatgtacagaaaaattcaagtttcaacaaccccaatttcattttccaaggccttacacaa-cactcatttttccaaaacggttaacaattgaattttcac 36891292  T
Q  212 acgaaactcccgttttctcccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaaccacataggc 311  Q
     |||||| || | ||||||||||| ||||||||||| || ||| || |||||    |||| | ||||| |||||||||||||||||||||||| |||| |    
T  36891291 ccgaaac-cctgatttctcccaaa-cgactcgactaccacaactacaacata----aaaacataaatttcatcaagtttaactcatccaaccagatagac 36891198  T
Q  312 aactcaatcaacaactttgtatatcaaatttcattttgg-tgcttcacatgaccatctagcacaattttaccaatacaaacaacnnnnnnnnncttcata 410  Q
    |||||| |||||||||||||||||||||||||| ||||| | |||||||||| |||||||||||| || |||||||||||||||         |||||||    
T  36891197 aactcagtcaacaactttgtatatcaaatttcactttgggtccttcacatgaacatctagcacaacttcaccaatacaaacaacca-------cttcata 36891105  T
Q  411 aaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacacaatatc 510  Q
    |||||||||| |||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  36891104 aaatggaatacccataatatcattcaacaacaacaacatatctaattcaacaatacttcatttagacatgaattcaaccataattcaacaacacaatatc 36891005  T
Q  511 caaatccaacaa-ttgagtaaaactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcataccc 609  Q
    | ||||||| || ||||| ||||||||||||||| | ||||||| |||||||||||||||| ||||||| ||||||| |||| | |||||||||||||||    
T  36891004 ccaatccaataatttgagcaaaactcataagtacccattttcaccaaaccaacaacaacaacttatttctcaacaac-aaatcaagaatcatgcataccc 36890906  T
Q  610 aagccatgaattagcatccataacatcacttaacaacaacaaca 653  Q
    ||||||||||| | |||||| ||||||||||| |||||||||||    
T  36890905 aagccatgaataatcatccacaacatcacttagcaacaacaaca 36890862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 30 - 660
Target Start/End: Complemental strand, 9653683 - 9653074
Alignment:
Q  30 acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataatgcacagaaaaatc 129  Q
    |||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||| || || | ||| ||||   |||| ||||| | ||||||||     
T  9653683 acgttttcgcgcgtaaaaatcaaaccgttaatccgttttcgatgtcgttttcacctacgtgttcatgacacttagttctatcttaatgtatagaaaaatt 9653584  T
Q  130 ccagtttcaacaacctcaaattcatttt-acaagcctcacacaaacactcattttccaaaacggttaacaaatgaattttcaaacgaaactcccgttttc 228  Q
    | ||||||||||||| |||||||||||| | |||||| |||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  9653583 caagtttcaacaaccccaaattcattttcaaaagccttacacaa-cactcattttccaaaacggttaacaaatgaattttcacccgaaactcccgttttc 9653485  T
Q  229 tcccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaaccacataggcaactcaatcaacaactt 328  Q
     ||| ||||||||||||||||| ||| ||     ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  9653484 -ccccaaacgactcgactatcacaactac----aacataaaaacagaaattccatcaagtttaactcatccaaccacatagacaactcagtcaacaactt 9653390  T
Q  329 tgtatatcaaatttca-ttttggtgcttcacatgaccatctagcacaattttaccaatacaaacaacnnnnnnnnncttcataaaatggaatatccatga 427  Q
    |||||| ||||||||| ||  ||| |||||||||| | | || ||||| || |||| ||||||||||          ||||||||||||||||  ||||     
T  9653389 tgtataacaaatttcacttcgggtccttcacatgaacctttatcacaacttcaccattacaaacaacttat------ttcataaaatggaatactcatgt 9653296  T
Q  428 tatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacacaatatccaaatccaacaattgag 527  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||||           |||||||||||||||||||| |||||||||||||||    
T  9653295 tatcattcgacaacaacaacatatctaattcaacaacacttcatttagacatg-----------aattcaacaacacaatatcccaatccaacaattgag 9653207  T
Q  528 taaaactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatc 627  Q
     ||||| ||||| || || ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9653206 caaaacacataattattcattttcaccaaaccaacaacaacaacttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatc 9653107  T
Q  628 cataacatcacttaacaacaacaacatctattg 660  Q
    |||||||||||||||||||| ||||||||||||    
T  9653106 cataacatcacttaacaacatcaacatctattg 9653074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 6 - 553
Target Start/End: Original strand, 19659480 - 19660037
Alignment:
Q  6 gacatcatcagattttcaa-cttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattag 104  Q
    |||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||    
T  19659480 gacaacatcagattttcaaacttc-acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgttcctgacacttag 19659578  T
Q  105 cagtatcataatgcacagaaaaatcccagtttcaacaacctcaaattcattttacaagcctcacacaaacactcattttccaaaacggttaacaaatgaa 204  Q
    |  |||||||||| |||||||||| | | |||||| || | ||||||||||||| || |||||||||| |||||||||||||||||||||||||| | ||    
T  19659579 ccctatcataatgtacagaaaaattcaaatttcaaaaatcccaaattcattttataaacctcacacaa-cactcattttccaaaacggttaacaattcaa 19659677  T
Q  205 ttttcaaacgaaactcccgttttctcccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaacca 304  Q
    |||||| |||||||||||| ||||||||||| |||||||||||||| ||| || |||||    |||| ||||||||||||||||||||||||  |||| |    
T  19659678 ttttcacacgaaactcccgatttctcccaaa-cgactcgactatcacaactacaacata----aaaacagaaattccatcaagtttaactcaaacaacaa 19659772  T
Q  305 cataggcaactcaatcaacaactttgtatatcaaatttcattttgg-tgcttcacatgaccatctagcacaattttaccaatacaaacaa---------- 393  Q
    ||| | |||||||| |||||| ||||||||||||||||||| |||| | |||||||||| |||||||||||| || ||||| ||||||||              
T  19659773 catcgacaactcaaacaacaaatttgtatatcaaatttcatattgggtccttcacatgaacatctagcacaacttcaccaacacaaacaacaacttgaca 19659872  T
Q  394 ----cnnnnnnnnncttcataaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaacc 489  Q
        |         |||||| |||||||||| ||||| ||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  19659873 aattcaaacaacaacttcatgaaatggaatacccatggtataattcaacaacaacaacacatctaattcaacaacacttcatttagacatgaattcaacc 19659972  T
Q  490 ataattcaacaacacaatatccaaatccaacaa-ttgagtaaaactcataagtactccttttcac 553  Q
    |||||||||||||||||||||| ||| |||||| ||||| ||||||||||| ||| | |||||||    
T  19659973 ataattcaacaacacaatatcccaattcaacaatttgagcaaaactcataaatacccattttcac 19660037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 174 - 653
Target Start/End: Complemental strand, 25876565 - 25876096
Alignment:
Q  174 cactcattttccaaaacggttaacaaatgaattttcaaacgaaactcccgttttctcccaaaacgactcgactatcataaccacgacatacataaaaata 273  Q
    |||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||| ||||||||||| || |||||| |||||    |||| |    
T  25876565 cacttattttccaaaacggttaacaattgaattttcatccgaaactcccgttttctcccaaa-cgactcgactaccacaaccacaacata----aaaaca 25876471  T
Q  274 gaaattccatcaagtttaactcatccaaccacataggcaactcaatcaacaactttgtatatcaaat-ttcattttgg-tgcttcacatgaccatctagc 371  Q
     |||||| | ||||||||||||||||||| |||| | ||||||| |||| ||||||||||||||||  |||||||||| | |||||||||| ||||||||    
T  25876470 taaattctaccaagtttaactcatccaacaacattgacaactcagtcaaaaactttgtatatcaaaagttcattttgggtccttcacatgaacatctagc 25876371  T
Q  372 acaattttaccaatacaaacaacnnnnnnnnncttcataaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaacacttcat 471  Q
    |||| || |||||||||||||||         ||||||||||||||||| ||||| ||| |||||||| |||||||||||||| ||||||||||||||||    
T  25876370 acaacttcaccaatacaaacaacaa-------cttcataaaatggaatacccatggtataattcaacagcaacaacatatctaattcaacaacacttcat 25876278  T
Q  472 ttagacatgaattcaaccataattcaacaacacaatatccaaatccaacaa-ttgagtaaaactcataagtactccttttcactaaaccaacaacaacaa 570  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||| | ||||||| ||||||||||||||||    
T  25876277 ttagacatgaattcaaccataattcaacaacacaatatcccaatccaacaatttgagcaaaactcataagtacccattttcaccaaaccaacaacaacaa 25876178  T
Q  571 tttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaaca 653  Q
     ||||||||||| ||| ||   | |||| ||||| ||||||||||||||||| |||| | ||||| ||| ||||| |||||||    
T  25876177 cttatttcacaataac-aagccaagaattatgcaaacccaagccatgaattatcatcaacaacatgactaaacaataacaaca 25876096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 148; E-Value: 9e-78
Query Start/End: Original strand, 231 - 660
Target Start/End: Complemental strand, 23831277 - 23830854
Alignment:
Q  231 ccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaaccacataggcaactcaatcaacaactttg 330  Q
    |||||||||||||||||||| |||||| |||||    |||| |||||||| | ||||||||||||||||||| |||| | ||||||| |||| |||||||    
T  23831277 ccaaaacgactcgactatcacaaccacaacata----aaaacagaaattctaccaagtttaactcatccaacaacatcgacaactcagtcaaaaactttg 23831182  T
Q  331 tatatcaaat-ttcatttt--ggtgcttcacatgaccatct-agcacaattttaccaatacaaacaacnnnnnnnnncttcataaaatggaatatccatg 426  Q
    |||||||||  ||||||||  ||| |||||||||| ||||| ||||||| || |||||| ||||||||         ||||| ||||||||||| |||||    
T  23831181 tatatcaaaagttcatttttgggtccttcacatgaacatcttagcacaacttcaccaattcaaacaacaa-------cttcacaaaatggaatacccatg 23831089  T
Q  427 atatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacacaatatccaaatccaacaa-ttg 525  Q
    |||| ||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||||||||||||||||||||||||  ||| || ||| |||    
T  23831088 atataattcaacaacaacaacatatctaattcaacaatacttaatttagacatgaattcaaccataattcaacaacacaatatcacaattcatcaatttg 23830989  T
Q  526 agtaaaactcataa-gtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagc 624  Q
    || |||||||| || |||| | ||||||| |||||||||||||||| |||||||||| || | |||| |||||| ||| | ||||| ||||||||| | |    
T  23830988 agcaaaactcacaaggtacccattttcacaaaaccaacaacaacaacttatttcacatcatc-aaatcatgaattatgaacacccatgccatgaatcatc 23830890  T
Q  625 atccataacatcacttaacaacaacaacatctattg 660  Q
    | | | || |||||||| ||||||||||||| ||||    
T  23830889 aacaacaatatcacttagcaacaacaacatcaattg 23830854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 231 - 660
Target Start/End: Complemental strand, 23822198 - 23821775
Alignment:
Q  231 ccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaaccacataggcaactcaatcaacaactttg 330  Q
    |||||||||||||||||||| |||||| |||||    |||| |||||||| | ||||||||||||||||||| |||| | ||||||| |||| |||||||    
T  23822198 ccaaaacgactcgactatcacaaccacaacata----aaaacagaaattctaccaagtttaactcatccaacaacatcgacaactcagtcaaaaactttg 23822103  T
Q  331 tatatcaaat-ttcatttt--ggtgcttcacatgaccatct-agcacaattttaccaatacaaacaacnnnnnnnnncttcataaaatggaatatccatg 426  Q
    |||||||||  ||||||||  ||| |||||||||| ||||| ||||||| || |||||| ||||||||         ||||| ||||||||||| |||||    
T  23822102 tatatcaaaagttcatttttgggtccttcacatgaacatcttagcacaacttcaccaattcaaacaacaa-------cttcacaaaatggaatacccatg 23822010  T
Q  427 atatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacacaatatccaaatccaacaa-ttg 525  Q
     ||| ||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||||||||||||||||||||||||  ||| || ||| |||    
T  23822009 gtataattcaacaacaacaacatatctaattcaacaatacttaatttagacatgaattcaaccataattcaacaacacaatatcacaattcatcaatttg 23821910  T
Q  526 agtaaaactcataa-gtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagc 624  Q
    || |||||||| || |||| | ||||||| |||||||||||||||| |||||||||| || | |||| |||||| ||| | ||||| ||||||||| | |    
T  23821909 agcaaaactcacaaggtacccattttcacaaaaccaacaacaacaacttatttcacatcatc-aaatcatgaattatgaacacccatgccatgaatcatc 23821811  T
Q  625 atccataacatcacttaacaacaacaacatctattg 660  Q
    | | | || |||||||| ||||||||||||| ||||    
T  23821810 aacaacaatatcacttagcaacaacaacatcaattg 23821775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 404 - 578
Target Start/End: Original strand, 16935417 - 16935591
Alignment:
Q  404 cttcataaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaaca 503  Q
    ||||| ||||||||||| ||||| ||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  16935417 cttcacaaaatggaatacccatggtataattcaacaacaacaacatatctaattcaacaatacttcatttagacatgaattcaaccataattcaacaaca 16935516  T
Q  504 caatatccaaatccaacaattgagtaaaactcataagtactccttttcactaaaccaacaacaacaatttatttc 578  Q
    |||||| | ||||||||||||||| ||||||||||||||| | ||||||| ||||||||||||||||||||||||    
T  16935517 caatattccaatccaacaattgagcaaaactcataagtacccattttcaccaaaccaacaacaacaatttatttc 16935591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 404 - 578
Target Start/End: Original strand, 17006077 - 17006251
Alignment:
Q  404 cttcataaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaaca 503  Q
    ||||| ||||||||||| ||||| ||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  17006077 cttcacaaaatggaatacccatggtataattcaacaacaacaacatatctaattcaacaatacttcatttagacatgaattcaaccataattcaacaaca 17006176  T
Q  504 caatatccaaatccaacaattgagtaaaactcataagtactccttttcactaaaccaacaacaacaatttatttc 578  Q
    |||||| | ||||||||||||||| ||||||||||||||| | ||||||| ||||||||||||||||||||||||    
T  17006177 caatattccaatccaacaattgagcaaaactcataagtacccattttcaccaaaccaacaacaacaatttatttc 17006251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 12642291 - 12642195
Alignment:
Q  20 ttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataat 116  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| || ||| |||||||||    
T  12642291 ttcaacttctacgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcgcctacatgctcctaacacttggcactatcataat 12642195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 20 - 114
Target Start/End: Complemental strand, 3799252 - 3799158
Alignment:
Q  20 ttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcata 114  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| || ||| |||||||    
T  3799252 ttcaacttctacgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcgcctacatgctcctaacacttggcactatcata 3799158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 30 - 191
Target Start/End: Complemental strand, 23822352 - 23822191
Alignment:
Q  30 acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataatgcacagaaaaatc 129  Q
    ||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||||| || | ||| |||||  |||| ||||| ||||||||||     
T  23822352 acgttttcgagcataacaatcaaaccgttaatccgttttcgatgccgttttcacctacatgttcatgacacttagccctatcttaatgtacagaaaaatt 23822253  T
Q  130 ccagtttcaacaacctcaaattcattttac-aagcctcacacaaacactcattttccaaaacg 191  Q
    | || || |||||||  ||||||||||| | |||||| |||||||||||||||||||||||||    
T  23822252 caag-ttaaacaacccgaaattcattttccaaagccttacacaaacactcattttccaaaacg 23822191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 30 - 191
Target Start/End: Complemental strand, 23831431 - 23831270
Alignment:
Q  30 acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataatgcacagaaaaatc 129  Q
    ||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||||| || | ||| |||||  |||| ||||| ||||||||||     
T  23831431 acgttttcgagcataacaatcaaaccgttaatccgttttcgatgccgttttcacctacatgttcatgacacttagccctatcttaatgtacagaaaaatt 23831332  T
Q  130 ccagtttcaacaacctcaaattcattttac-aagcctcacacaaacactcattttccaaaacg 191  Q
    | || || |||||||  ||||||||||| | |||||| |||||||||||||||||||||||||    
T  23831331 caag-ttaaacaacccgaaattcattttccaaagccttacacaaacactcattttccaaaacg 23831270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 42178610 - 42178514
Alignment:
Q  20 ttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataat 116  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| || ||| |||||||||    
T  42178610 ttcaacttccacgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcgcctacatgctcctaacacttggcactatcataat 42178514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 12636517 - 12636421
Alignment:
Q  20 ttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataat 116  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||| || ||| |||||||||    
T  12636517 ttcaacttctactttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgtttccgcctacatgctcctaacacttggcactatcataat 12636421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 11 - 140
Target Start/End: Original strand, 19358496 - 19358625
Alignment:
Q  11 catcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtat 110  Q
    |||||||||||||||    |||||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||| |||| ||| ||| |  |||    
T  19358496 catcagattttcaaccatcacgttttcgctcataaaaatcaaaccgttaatctgttttcgatgttgttttcacctacatgttcctgacacttaactctat 19358595  T
Q  111 cataatgcacagaaaaatcccagtttcaac 140  Q
    ||||||  |||||||||| | |||||||||    
T  19358596 cataatatacagaaaaattcaagtttcaac 19358625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 8943453 - 8943549
Alignment:
Q  20 ttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataat 116  Q
    |||||||||||| ||||||||||||||||||||||||||| ||  ||||||||| ||||| | ||||||||||||||||| || ||| |||||||||    
T  8943453 ttcaacttctactttttcgcgcataaaaatcaaaccgttactccattttcgatgtcgtttccgcctacatgctcctaacacttggcactatcataat 8943549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 547 - 660
Target Start/End: Original strand, 28974014 - 28974126
Alignment:
Q  547 ttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaac 646  Q
    ||||||||||| || ||||||||  | ||||| || ||||||| | |||||||||||| ||||||||||||||||| |||| | ||||| ||||| ||||    
T  28974014 ttttcactaaaacaccaacaacatctcatttctcatcaacaaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacttagcaac 28974112  T
Q  647 aacaacatctattg 660  Q
    ||||||||| ||||    
T  28974113 aacaacatcaattg 28974126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 11 - 140
Target Start/End: Complemental strand, 6477674 - 6477544
Alignment:
Q  11 catcagattttc-aacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagta 109  Q
    |||||||||||| |||||  |||||||||||| |||||  ||||||||||| |  |||| |||||||||||| |||||| |||||| ||| |||||  ||    
T  6477674 catcagattttctaactttcacgttttcgcgcgtaaaatccaaaccgttaacccatttttgatgccgttttcgcctacacgctcctgacacttagcctta 6477575  T
Q  110 tcataatgcacagaaaaatcccagtttcaac 140  Q
    |||| ||  |||||||||| | |||||||||    
T  6477574 tcattatctacagaaaaattcaagtttcaac 6477544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 30 - 140
Target Start/End: Original strand, 22703605 - 22703715
Alignment:
Q  30 acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataatgcacagaaaaatc 129  Q
    |||||||||||| |||||  |||| |||||| |  ||||||||||||||||| |||||| |||||| ||| |||||  |||||||||  ||||||||||     
T  22703605 acgttttcgcgcgtaaaatccaaatcgttaacccattttcgatgccgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaatt 22703704  T
Q  130 ccagtttcaac 140  Q
    | |||||||||    
T  22703705 caagtttcaac 22703715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 34 - 140
Target Start/End: Original strand, 34877461 - 34877567
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataatgcacagaaaaatcccag 133  Q
    |||||||| ||||| ||||||| ||||||||||||||||||||||||| || ||| |||||| ||| |||||  ||||||| |  ||||| |||| | ||    
T  34877461 tttcgcgcgtaaaattcaaaccattaatctgttttcgatgccgttttcgccaacacgctcctgacacttagctctatcatattctacagagaaattcaag 34877560  T
Q  134 tttcaac 140  Q
    |||||||    
T  34877561 tttcaac 34877567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 548 - 660
Target Start/End: Original strand, 32465824 - 32465935
Alignment:
Q  548 tttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaaca 647  Q
    |||||| ||| || ||||||||  | ||||| ||||||||||   |||||||||||| ||||||||||||||||| |||| | ||||| ||| |||||||    
T  32465824 tttcaccaaaacaccaacaacatctcatttctcaacaacaaacc-atgaatcatgcaaacccaagccatgaattatcatcaacaacatgactaaacaaca 32465922  T
Q  648 acaacatctattg 660  Q
    |||||||| ||||    
T  32465923 acaacatcaattg 32465935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 34 - 125
Target Start/End: Original strand, 16935056 - 16935147
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataatgcacagaaa 125  Q
    |||||||||||||| |||||||||||||| | ||| || ||||||||| |||||| |||||| ||| |||||  |||||||||  |||||||    
T  16935056 tttcgcgcataaaattcaaaccgttaatcggattttgacgccgttttcgcctacacgctcctgacacttagctctatcataatctacagaaa 16935147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 34 - 125
Target Start/End: Original strand, 17005716 - 17005807
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataatgcacagaaa 125  Q
    |||||||||||||| |||||||||||||| | ||| || ||||||||| |||||| |||||| ||| |||||  |||||||||  |||||||    
T  17005716 tttcgcgcataaaattcaaaccgttaatcggattttgacgccgttttcgcctacacgctcctgacacttagctctatcataatctacagaaa 17005807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 93
Target Start/End: Complemental strand, 27366994 - 27366907
Alignment:
Q  6 gacatcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctc 93  Q
    |||| |||||||||||| || |  |||||||||||| |||||| | ||||||||| | |||||||||||||||||| |||||| ||||    
T  27366994 gacagcatcagattttcgaccttcacgttttcgcgcgtaaaaacccaaccgttaacccgttttcgatgccgttttcgcctacacgctc 27366907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 140
Target Start/End: Complemental strand, 24087990 - 24087880
Alignment:
Q  30 acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataatgcacagaaaaatc 129  Q
    |||||||||||| |||||  |||| ||| || | |||||||||||||||||| |||||| |||||| ||| |||||  |||||||||  ||||||| ||     
T  24087990 acgttttcgcgcgtaaaatccaaatcgtcaacccgttttcgatgccgttttcgcctacacgctcctgacacttagctctatcataatctacagaaacatt 24087891  T
Q  130 ccagtttcaac 140  Q
    | |||||||||    
T  24087890 caagtttcaac 24087880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 555 - 660
Target Start/End: Complemental strand, 24571565 - 24571462
Alignment:
Q  555 aaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacat 654  Q
    |||||| ||||||||  | ||||| |||||||||| | ||||||||| |||| |||||| |||| ||| |||| | ||||||||||||||||||||||||    
T  24571565 aaaccaccaacaacatctcatttctcaacaacaaa-tcatgaatcatacatagccaagc-atgagttatcatcaacaacatcacttaacaacaacaacat 24571468  T
Q  655 ctattg 660  Q
    | ||||    
T  24571467 caattg 24571462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 30 - 95
Target Start/End: Complemental strand, 45618029 - 45617964
Alignment:
Q  30 acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcct 95  Q
    |||||||||||| |||||  ||||| |||||||||||||||| ||||||||| |||||| ||||||    
T  45618029 acgttttcgcgcgtaaaatccaaactgttaatctgttttcgacgccgttttcgcctacacgctcct 45617964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 588 - 660
Target Start/End: Complemental strand, 4448375 - 4448303
Alignment:
Q  588 aaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||| |||||||||||| ||||||||||||||||| |||| | ||||| || || ||||||||||||| ||||    
T  4448375 aaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaacaacaacatcaattg 4448303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 588 - 660
Target Start/End: Complemental strand, 22580101 - 22580029
Alignment:
Q  588 aaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||| |||||||||||||||||||||||||||||| |||| | |||||||| || || || ||||||| ||||    
T  22580101 aaatcatgaatcatgcatacccaagccatgaattatcatcaacaacatcacatatcagcagcaacatcaattg 22580029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 548 - 660
Target Start/End: Original strand, 25601990 - 25602101
Alignment:
Q  548 tttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaaca 647  Q
    |||||| |||||| ||||||||||  ||||| |||||||||| | |||||||||||| ||| ||||||||| ||| |||  | ||||| || || |||||    
T  25601990 tttcacaaaaccaccaacaacaatccatttctcaacaacaaa-tcatgaatcatgcaaacctaagccatgatttatcataaacaacatgacatagcaaca 25602088  T
Q  648 acaacatctattg 660  Q
    |||||||| ||||    
T  25602089 acaacatcaattg 25602101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 588 - 660
Target Start/End: Original strand, 27261811 - 27261883
Alignment:
Q  588 aaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||| |||||||||||| ||||||||||||||||| |||| | ||||| ||||| ||||||||| ||| ||||    
T  27261811 aaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacttagcaacaacaatatcaattg 27261883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 593 - 660
Target Start/End: Complemental strand, 19669346 - 19669279
Alignment:
Q  593 atgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||||| ||| ||||||||||||||||| | || | ||||||||||||| ||||||||||||| ||||    
T  19669346 atgaattatgaatacccaagccatgaatcatcaacaataacatcacttagcaacaacaacatcaattg 19669279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 438 - 503
Target Start/End: Complemental strand, 24087594 - 24087529
Alignment:
Q  438 caacaacaacatatctacttcaacaaca-cttcatttagacatgaattcaaccataattcaacaaca 503  Q
    ||||||||||||||| | |||||||||| ||||||| | |||||||||||||||||| |||||||||    
T  24087594 caacaacaacatatccaattcaacaacaacttcattaa-acatgaattcaaccataaatcaacaaca 24087529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 547 - 660
Target Start/End: Original strand, 67957 - 68069
Alignment:
Q  547 ttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaac 646  Q
    ||||||| |||||||||||||||| ||||||| || || | |||| |||||| ||| | || |||||||||||| | || | | || |||||||| ||||    
T  67957 ttttcacaaaaccaacaacaacaacttatttctcatcatc-aaatcatgaattatgaacacgcaagccatgaatcaccaacaacaatatcacttagcaac 68055  T
Q  647 aacaacatctattg 660  Q
    ||||||||| ||||    
T  68056 aacaacatcaattg 68069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 95
Target Start/End: Complemental strand, 11231977 - 11231916
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcct 95  Q
    |||||||| |||||  ||||||||||||| | ||| ||||||||||||||||||||| ||||    
T  11231977 tttcgcgcgtaaaatgcaaaccgttaatcggattttgatgccgttttcacctacatgatcct 11231916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 12728007 - 12728068
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcct 95  Q
    |||||||| ||||| |||||||||||||| | ||| |||||||||||| |||||| ||||||    
T  12728007 tttcgcgcgtaaaattcaaaccgttaatcggattttgatgccgttttcgcctacacgctcct 12728068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 555 - 660
Target Start/End: Original strand, 19666501 - 19666605
Alignment:
Q  555 aaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacat 654  Q
    |||||||||||||||||  ||||| || || |||||  |||||| ||| ||||||||||||||||| | || | | || |||||||| ||||||||||||    
T  19666501 aaaccaacaacaacaatccatttctcatcatcaaaac-atgaattatgaatacccaagccatgaatcatcaacgacaatatcacttagcaacaacaacat 19666599  T
Q  655 ctattg 660  Q
    | ||||    
T  19666600 caattg 19666605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 404 - 500
Target Start/End: Original strand, 20279435 - 20279532
Alignment:
Q  404 cttcataaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaac-acttcatttagacatgaattcaaccataattcaaca 500  Q
    ||||| ||||||||||| ||||| ||  | |||||||||| |||||||| | ||||||||| ||| | |||| ||||||||||||||| || ||||||    
T  20279435 cttcacaaaatggaatacccatggtacaaatcaacaacaataacatatccaattcaacaacaactccgtttaaacatgaattcaaccacaaatcaaca 20279532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 95
Target Start/End: Complemental strand, 22513824 - 22513763
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcct 95  Q
    |||||||| |||||  ||||||||||||| | ||| ||||||||||||||||||||| ||||    
T  22513824 tttcgcgcgtaaaatgcaaaccgttaatcggattttgatgccgttttcacctacatgatcct 22513763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 588 - 660
Target Start/End: Original strand, 271175 - 271247
Alignment:
Q  588 aaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||| |||||||||||| |||||||| |||||||| |||| | ||||| || || ||||||||||||| ||||    
T  271175 aaatcatgaatcatgcaaacccaagctatgaattatcatcaacaacatgacatatcaacaacaacatcaattg 271247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 547 - 655
Target Start/End: Original strand, 6094681 - 6094788
Alignment:
Q  547 ttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaac 646  Q
    ||||||| |||||||||||||||| ||||| |||| | ||||| | |||| | ||| |||||||||| |||||| | || | | || ||| |||||||||    
T  6094681 ttttcacaaaaccaacaacaacaacttattccacatc-acaaactcatgatttatgaatacccaagctatgaatcatcaacaacaatatctcttaacaac 6094779  T
Q  647 aacaacatc 655  Q
    |||||||||    
T  6094780 aacaacatc 6094788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 593 - 660
Target Start/End: Complemental strand, 3478 - 3411
Alignment:
Q  593 atgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||||| ||| | ||||||||||||||| | |||| | ||||||||||| ||||||||||||| ||||    
T  3478 atgaattatgaacacccaagccatgaatcatcatcaacaacatcacttagcaacaacaacatcaattg 3411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 404 - 486
Target Start/End: Complemental strand, 45617663 - 45617580
Alignment:
Q  404 cttcataaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaac-acttcatttagacatgaattca 486  Q
    ||||| ||||||||| | ||||||||  ||||| ||||||||||| ||  | ||||||||| |||||||||| |||||||||||    
T  45617663 cttcacaaaatggaacacccatgatacaattcagcaacaacaacacattcaattcaacaacaacttcatttaaacatgaattca 45617580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 34 - 88
Target Start/End: Complemental strand, 24686420 - 24686366
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctaca 88  Q
    |||||||| |||||  ||||||||||||| | ||| |||||||||||||||||||    
T  24686420 tttcgcgcgtaaaatgcaaaccgttaatcggattttgatgccgttttcacctaca 24686366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 34 - 88
Target Start/End: Original strand, 28349800 - 28349854
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctaca 88  Q
    |||||||||||||| || ||||||||||| | ||| |||||||||||| ||||||    
T  28349800 tttcgcgcataaaattccaaccgttaatcggattttgatgccgttttcgcctaca 28349854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 34 - 88
Target Start/End: Complemental strand, 28776446 - 28776392
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctaca 88  Q
    |||||||| |||||  ||||||||||||| | ||| |||||||||||||||||||    
T  28776446 tttcgcgcgtaaaatgcaaaccgttaatcggattttgatgccgttttcacctaca 28776392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 34824066 - 34824127
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcct 95  Q
    |||||||| ||||| |||||||||||||  | ||| |||||||||||| |||||| ||||||    
T  34824066 tttcgcgcgtaaaattcaaaccgttaattggattttgatgccgttttcgcctacacgctcct 34824127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 555 - 655
Target Start/End: Original strand, 9636718 - 9636817
Alignment:
Q  555 aaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacat 654  Q
    |||||||||||||||| |||||||||| | ||||| | |||| | ||| |||||||| | |||||| | || | | || ||| |||||||||||||||||    
T  9636718 aaaccaacaacaacaagttatttcacatc-acaaactcatgatttatgaatacccaaactatgaatcatcaacaacaatatctcttaacaacaacaacat 9636816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 588 - 660
Target Start/End: Complemental strand, 24294765 - 24294693
Alignment:
Q  588 aaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||| |||||| ||| |||| |||||||||||| | |||| | | ||||||||| ||||||||||||| ||||    
T  24294765 aaatcatgaattatgaatactcaagccatgaatcatcatcaacatcatcacttagcaacaacaacatcaattg 24294693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 444; Significance: 0; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 444; E-Value: 0
Query Start/End: Original strand, 6 - 653
Target Start/End: Original strand, 21204360 - 21204996
Alignment:
Q  6 gacatcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagc 105  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  21204360 gacagcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcacctacatgctcctaacacttagc 21204459  T
Q  106 agtatcataatgcacagaaaaatcccagtttcaacaacctcaaattcattttacaagcctcacacaaacactcattttccaaaacggttaacaaatgaat 205  Q
    | |||||||||||| |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  21204460 actatcataatgcatagaaaaatcccagtttcaacaacctcaaattcattttataaacctcacacaaacactcattttccaaaacggttaacaaatgaat 21204559  T
Q  206 tttcaaacgaaactcccgttttctcccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaaccac 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||     ||||||||| |||||||||||||||||||||||||||||||||    
T  21204560 tttcaaacgaaactcccgttttctcccaaaacgactcgactatcaaaaccac----aacataaaaaaagaaattccatcaagtttaactcatccaaccac 21204655  T
Q  306 ataggcaactcaatcaacaactttgtatatcaaatttcattttggtgcttcacatgaccatctagcacaattttaccaatacaaacaacnnnnnnnnnct 405  Q
    |||| ||||||| ||||||||||||||||||||||| || ||| || |||||||||| |||||||||||| || |||||||||||||||          |    
T  21204656 atagacaactcagtcaacaactttgtatatcaaattccacttt-gttcttcacatgaacatctagcacaacttcaccaatacaaacaacttat------t 21204748  T
Q  406 tcataaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacaca 505  Q
    |||||||||||||||   |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  21204749 tcataaaatggaatacttatgatatcgttcaacaacaacaacatatctacttcaacaacacttcatttagacatgaatttaaccataatttaacaacaca 21204848  T
Q  506 atatccaaatccaacaattgagtaaaactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcat 605  Q
    |||||| ||| ||||||||||| ||||| ||||||||  | ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  21204849 atatcccaattcaacaattgagcaaaacacataagtatccattttcaccaaaccaacaacaacaacttatttcacaacaacaaaattatgaatcatgcat 21204948  T
Q  606 acccaagccatgaattagcatccataacatcacttaacaacaacaaca 653  Q
    |||||||||||||||||| ||  |||||||||||||||||||||||||    
T  21204949 acccaagccatgaattagaataaataacatcacttaacaacaacaaca 21204996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 14 - 660
Target Start/End: Original strand, 20711518 - 20712153
Alignment:
Q  14 cagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcat 113  Q
    |||||||||||| || || ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| || | ||| |||||  |||| |    
T  20711518 cagattttcaacctccacattttcacgcataaaaatcaaaccgttaatctgttttcgatgtcgttttcacctacatgttcatgacacttagccctatctt 20711617  T
Q  114 aatgcacagaaaaatcccagtttcaacaacctcaaattcattttacaa-gcctcacacaaacactcattttccaaaacggttaacaaatgaattttcaaa 212  Q
    |||| |||||||||| | ||||||||||    |||||||||||| ||| |||| | |||| |||||||||||||||||||||||||| |||||||||       
T  20711618 aatgtacagaaaaattcaagtttcaacatttccaaattcattttccaaagccttatacaa-cactcattttccaaaacggttaacaattgaattttcgcc 20711716  T
Q  213 cgaaactcccgttttctcccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaaccacataggca 312  Q
    ||||||||||  ||| ||||||| ||||||||||  |  ||| ||||||||    |||| |||||||||||||||||||||||||||||| || ||| ||    
T  20711717 cgaaactcccaatttttcccaaa-cgactcgactgaccaaactacgacata----aaaacagaaattccatcaagtttaactcatccaactacctagaca 20711811  T
Q  313 actcaatcaacaactttgtatatcaaatttcattttggtgctt-cacatgaccatctagcacaattttaccaatacaaacaacnnnnnnnnncttcataa 411  Q
    ||||  |||||||||||||||||||||||||| |||||  ||| ||||||| |||||||||||| || ||||||||||| |||         ||||||||    
T  20711812 actcggtcaacaactttgtatatcaaatttcactttgggtctttcacatgaacatctagcacaacttcaccaatacaaataacaa-------cttcataa 20711904  T
Q  412 aatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacacaatatcc 511  Q
    |||  |||| ||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20711905 aataaaatacccatggtataattcaacaacaacaacatatctaattcaacaacacttcatttagacatgaattcaaccataattcaacaacacaatatcc 20712004  T
Q  512 aaatccaacaa-ttgagtaaaactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcataccca 610  Q
     |||||||||| ||||| ||||||||| ||||| | ||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  20712005 caatccaacaatttgagcaaaactcatcagtacccattttcaccaaaccaacaacaacaacttatttcacaacaac-aaattatgaatcatgcataccca 20712103  T
Q  611 agccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||||||||||| |||| | ||||| ||||||||||||||||||| ||||    
T  20712104 agccatgaattaacatcaacaacatgacttaacaacaacaacatcaattg 20712153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 12 - 660
Target Start/End: Original strand, 21650138 - 21650772
Alignment:
Q  12 atcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatc 111  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||| || ||   ||| |||||  ||||    
T  21650138 atcagattttcaacctccacgttttcgcgcataaaaatcaaaccgttaatccgtttttgatgtcgttttcacctacttgttcacgacacttagccctatc 21650237  T
Q  112 ataatgcacagaaaaatc--ccagtttcaacaacctcaaattcattttacaa-gcctcacacaaacactcattttccaaaacggttaacaaatgaatttt 208  Q
     ||||| |||||||||    | ||||||||||    |||||||||||| ||| |||| |||||| |||||||||||||||||||||||||||||||| ||    
T  21650238 ttaatgtacagaaaaaaaatcaagtttcaacatttccaaattcattttccaaagccttacacaa-cactcattttccaaaacggttaacaaatgaatatt 21650336  T
Q  209 caaacgaaactcccgttttctcccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaaccacata 308  Q
     |  ||||||||   |||||||   ||| |||||||||| || ||| ||||||||    |||| |||||||||| ||||||||||||||||||| |||||    
T  21650337 tacccgaaactcaa-ttttctc---aaatgactcgactaacacaactacgacata----aaaacagaaattccaacaagtttaactcatccaactacata 21650428  T
Q  309 ggcaactcaatcaacaactttgtatatcaaatttcattttgg-tgcttcacatgaccatctagcacaattttaccaatacaaacaacnnnnnnnnncttc 407  Q
    | ||||||| ||| ||||||||||| |||||||||| ||||| | |||||||||| |||||||||||| || ||||||||||| |||          |||    
T  21650429 gacaactcagtcatcaactttgtatgtcaaatttcactttgggttcttcacatgaacatctagcacaacttcaccaatacaaa-aacttat------ttc 21650521  T
Q  408 ataaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacacaat 507  Q
    |||||||||||||  |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  21650522 ataaaatggaatactcatgatatcattcaacaacaacaa-atatctacttcaacaacatttcatttagacatgaattcaaccataattcaacaacacaat 21650620  T
Q  508 atccaaatccaacaattgagtaaaactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatac 607  Q
    |||| |||| |||||||||| ||||| ||||||||  | ||||||| |||||||||||||||| ||||||||| ||||| ||||||||||||||||||||    
T  21650621 atcccaatctaacaattgagcaaaacacataagtatccattttcaccaaaccaacaacaacaacttatttcaccacaac-aaattatgaatcatgcatac 21650719  T
Q  608 ccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  21650720 ccaaaccatgaattagcattcataacatcacttaacaacaacaacatctattg 21650772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 12 - 385
Target Start/End: Original strand, 21109334 - 21109706
Alignment:
Q  12 atcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatc 111  Q
    |||||||||||||| |  ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| |||| ||| |||||  ||||    
T  21109334 atcagattttcaaccttcacgttttcgcgcataaatatcaaaccgttaatctgttttcgatgtcgttttcacctacatgttcctgacacttagccctatc 21109433  T
Q  112 ataatgcacagaaaaatcccagtttcaacaacctcaaattcattttac-aagcctcacacaaacactcattttccaaaacggttaacaaatgaattttca 210  Q
    | |||| ||||||||||   ||||||||||||| |||||||||||| | || ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  21109434 acaatgtacagaaaaattgaagtttcaacaaccccaaattcattttccaaaacctcacacaaacactcattttccaaaacggttaacaattgaattttca 21109533  T
Q  211 aacgaaactcccgttttctcccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaaccacatagg 310  Q
     | |||||| |||||||||||| ||||||||||||||||| ||| ||     ||||||||| |||||||| | ||||||||||||  ||||| |||  |     
T  21109534 catgaaacttccgttttctccc-aaacgactcgactatcacaactac----aacataaaaacagaaattctaccaagtttaactctcccaacaacaccga 21109628  T
Q  311 caactcaatcaacaactttgtatatc-aaatttcattttgg-tgcttcacatgaccatc-tagcacaattttaccaat 385  Q
    ||||||| |||||||||||||||||| ||| |||||||||| | |||||||||| |||| |||||||| || ||||||    
T  21109629 caactcagtcaacaactttgtatatcaaaagttcattttggatccttcacatgaacatcttagcacaacttcaccaat 21109706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 6 - 155
Target Start/End: Original strand, 22111577 - 22111726
Alignment:
Q  6 gacatcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagc 105  Q
    |||| ||||||||||||||| |  |||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||| | ||  || |||||    
T  22111577 gacagcatcagattttcaaccttcacgttttcgcacataaaaatcaatccgttaatctgttttcgatgccgttttcacccacatgtttctggcacttagc 22111676  T
Q  106 agtatcataatgcacagaaaaatcccagtttcaacaacctcaaattcatt 155  Q
    | |||||||||| | |||||||| | |||||||| |||| ||||||||||    
T  22111677 actatcataatgtatagaaaaattcaagtttcaataaccacaaattcatt 22111726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 9731033 - 9730937
Alignment:
Q  20 ttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataat 116  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||| || ||| |||||||||    
T  9731033 ttcaacttctactttttcgcgcataaaaatcaaaccgttaatccgttttcgacgccgttttcgcctacatgctcctaacacttggcactatcataat 9730937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 6 - 145
Target Start/End: Complemental strand, 8952483 - 8952344
Alignment:
Q  6 gacatcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagc 105  Q
    |||| |||||||||| |||| |  ||||||||||||||||||| ||||||||||| | |||||||||||||||||| |||||| |||||| ||| |||||    
T  8952483 gacaacatcagatttccaaccttcacgttttcgcgcataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctacacgctcctgacacttagc 8952384  T
Q  106 agtatcataatgcacagaaaaatcccagtttcaacaacct 145  Q
      |||||||||  |||||||||| | ||||||||| ||||    
T  8952383 tctatcataatctacagaaaaattcaagtttcaaccacct 8952344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 6 - 140
Target Start/End: Complemental strand, 18318650 - 18318516
Alignment:
Q  6 gacatcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagc 105  Q
    |||| ||||||||||||| | |  |||||||||||| |||||||||||||||||| |||||||||||||||||||| |||||  |||||| ||| |||||    
T  18318650 gacagcatcagattttcacccttcacgttttcgcgcctaaaaatcaaaccgttaacctgttttcgatgccgttttcgcctacgcgctcctgacacttagc 18318551  T
Q  106 agtatcataatgcacagaaaaatcccagtttcaac 140  Q
      ||||| |||  |  ||||||| |||||||||||    
T  18318550 tctatcacaatctaaggaaaaattccagtttcaac 18318516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 6 - 140
Target Start/End: Complemental strand, 20765699 - 20765565
Alignment:
Q  6 gacatcatcagattttcaa-cttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattag 104  Q
    |||| |||||||||||||  |||| |||||||| ||| |||||||||||||||||| |  ||||||||||||||||| |||||  |||||| ||| ||||    
T  20765699 gacagcatcagattttcactcttc-acgttttcacgcctaaaaatcaaaccgttaaccccttttcgatgccgttttcgcctacgcgctcctgacacttag 20765601  T
Q  105 cagtatcataatgcacagaaaaatcccagtttcaac 140  Q
    |  ||||| |||  |||||||||| |||||||||||    
T  20765600 ctctatcacaatctacagaaaaattccagtttcaac 20765565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 13 - 116
Target Start/End: Original strand, 40726303 - 40726406
Alignment:
Q  13 tcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatca 112  Q
    ||||||||||||| |  |||||||||| |||||||| ||||||||||| | |||||||||||||||||| |||| | |||||| ||| |||||  |||||    
T  40726303 tcagattttcaaccttcacgttttcgctcataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctaaacgctcctgacacttagccctatca 40726402  T
Q  113 taat 116  Q
    ||||    
T  40726403 taat 40726406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 542 - 660
Target Start/End: Original strand, 23493879 - 23493996
Alignment:
Q  542 actccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcactta 641  Q
    |||| ||||||| |||||||||||||||| ||||||| || || |||| | |||||| ||| | ||||||||||||||| | |||| | |||||||||||    
T  23493879 actcattttcaccaaaccaacaacaacaacttatttctcatcatcaaa-tcatgaattatgaacacccaagccatgaatcatcatcaacaacatcactta 23493977  T
Q  642 acaacaacaacatctattg 660  Q
     ||||||||||||| ||||    
T  23493978 gcaacaacaacatcaattg 23493996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 12 - 93
Target Start/End: Complemental strand, 22007325 - 22007244
Alignment:
Q  12 atcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctc 93  Q
    ||||||||||| || |  ||||||||||||||||||| ||||||||||| | |||||||||||||||||| |||||| ||||    
T  22007325 atcagattttcgaccttcacgttttcgcgcataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctacacgctc 22007244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 32 - 128
Target Start/End: Complemental strand, 21311319 - 21311223
Alignment:
Q  32 gttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataatgcacagaaaaat 128  Q
    ||||||||||||||||  ||||||||||| | |||||||||||||||||| |||| | |||||| ||| |||||  |||||||||  ||||||||||    
T  21311319 gttttcgcgcataaaatccaaaccgttaacccgttttcgatgccgttttcgcctatacgctcctgacacttagctctatcataatctacagaaaaat 21311223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 554 - 653
Target Start/End: Original strand, 2031782 - 2031880
Alignment:
Q  554 taaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaaca 653  Q
    ||||||| ||||||||||  ||||| |||||||||| | |||||||||||| ||||||||||||||||| |||| | || || ||| |||||||||||||    
T  2031782 taaaccaccaacaacaatccatttctcaacaacaaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaatatgactaaacaacaacaaca 2031880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 574 - 660
Target Start/End: Complemental strand, 1168459 - 1168374
Alignment:
Q  574 atttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    ||||| |||||||||| | |||||||||||| ||||||||||||||||| |||| | ||||| ||||| ||||||||||||| ||||    
T  1168459 atttctcaacaacaaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacttagcaacaacaacatcaattg 1168374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 588 - 660
Target Start/End: Original strand, 23466462 - 23466534
Alignment:
Q  588 aaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||| ||||||||||||||||||||||||||| || |||| | | ||||||||| ||||||||||||| ||||    
T  23466462 aaatcatgaatcatgcatacccaagccatgaactatcatcaacatcatcacttagcaacaacaacatcaattg 23466534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 140
Target Start/End: Complemental strand, 22777488 - 22777378
Alignment:
Q  30 acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataatgcacagaaaaatc 129  Q
    |||||||||||||||||| |||||| ||||  | |||||||||||||||||| |||||| |||| | ||| ||| |  |||||||||  ||||||| ||     
T  22777488 acgttttcgcgcataaaattcaaactgttatcccgttttcgatgccgttttcgcctacacgctcatgacacttaactctatcataatctacagaaagatt 22777389  T
Q  130 ccagtttcaac 140  Q
    | |||||||||    
T  22777388 caagtttcaac 22777378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 593 - 650
Target Start/End: Original strand, 21906730 - 21906787
Alignment:
Q  593 atgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaaca 650  Q
    |||||||||||| ||||||||||||||||| |||| | ||||| ||||||||||||||    
T  21906730 atgaatcatgcaaacccaagccatgaattatcatcaacaacatgacttaacaacaaca 21906787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 116
Target Start/End: Complemental strand, 21297776 - 21297692
Alignment:
Q  32 gttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataat 116  Q
    ||||||||||||||||  ||||| ||||| | |||||||||| ||||||| |||||| |||||| ||| |||||  |||||||||    
T  21297776 gttttcgcgcataaaatccaaactgttaacccgttttcgatgtcgttttcgcctacacgctcctgacacttagctctatcataat 21297692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 593 - 653
Target Start/End: Original strand, 21397099 - 21397159
Alignment:
Q  593 atgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaaca 653  Q
    |||||||||||| ||||||||||||||||| |||| | ||||| |||||||||||| ||||    
T  21397099 atgaatcatgcaaacccaagccatgaattatcatcaacaacatgacttaacaacaataaca 21397159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 235
Target Start/End: Original strand, 432225 - 432294
Alignment:
Q  165 tcacacaaacactcattttccaaaacggttaacaaatgaattttcaaacgaaactcccgttttctcccaaa 235  Q
    |||||||||||||||||||| |||| |||| ||||  ||| ||||| ||||||||| ||||||||||||||    
T  432225 tcacacaaacactcattttc-aaaatggttcacaatcgaagtttcacacgaaactctcgttttctcccaaa 432294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 140
Target Start/End: Original strand, 10817440 - 10817550
Alignment:
Q  30 acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataatgcacagaaaaatc 129  Q
    |||||||| ||| |||||  ||||||||||| |  ||||||||||| ||||| |||||| |||||| ||| |||||  |||||||||  | ||||||||     
T  10817440 acgttttcacgcgtaaaatccaaaccgttaacccattttcgatgcccttttcgcctacacgctcctgacacttagctctatcataatctatagaaaaatt 10817539  T
Q  130 ccagtttcaac 140  Q
    | |||||||||    
T  10817540 caagtttcaac 10817550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 465 - 499
Target Start/End: Complemental strand, 14342398 - 14342364
Alignment:
Q  465 acttcatttagacatgaattcaaccataattcaac 499  Q
    |||||||||||||||||||||||||||||||||||    
T  14342398 acttcatttagacatgaattcaaccataattcaac 14342364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 588 - 638
Target Start/End: Original strand, 19405542 - 19405592
Alignment:
Q  588 aaattatgaatcatgcatacccaagccatgaattagcatccataacatcac 638  Q
    |||| |||||||||||||||||||||||||||||| |||| | ||||||||    
T  19405542 aaatcatgaatcatgcatacccaagccatgaattatcatcaacaacatcac 19405592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 22357346 - 22357256
Alignment:
Q  6 gacatcatcagattttcaacttct-acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcct 95  Q
    |||| |||||||||||| | || | |||||||||||| |||||  |||||||||||   |||||||||||||||||| |||||| ||||||    
T  22357346 gacaacatcagattttctaattttcacgttttcgcgcgtaaaatccaaaccgttaactcgttttcgatgccgttttcgcctacacgctcct 22357256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 140
Target Start/End: Original strand, 23539396 - 23539506
Alignment:
Q  30 acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataatgcacagaaaaatc 129  Q
    ||||||| |||| |||||  ||||||||||  |  ||||||||||||||||| |||||| |||||| ||| |||||  |||||||||  ||||| ||||     
T  23539396 acgtttttgcgcgtaaaatccaaaccgttatcccattttcgatgccgttttcgcctacacgctcctgacacttagctctatcataatctacagataaatt 23539495  T
Q  130 ccagtttcaac 140  Q
    | |||||||||    
T  23539496 caagtttcaac 23539506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 1220157 - 1220098
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctc 93  Q
    |||||||| ||||| |||||||||||||| | ||| |||||||||||| |||||| ||||    
T  1220157 tttcgcgcgtaaaattcaaaccgttaatcggattttgatgccgttttcgcctacacgctc 1220098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 593 - 660
Target Start/End: Original strand, 7728430 - 7728497
Alignment:
Q  593 atgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||||| ||||| |||||||| || ||||| |||| | ||||||||||| ||||||||||||| ||||    
T  7728430 atgaattatgcacacccaagcgataaattatcatcaacaacatcacttagcaacaacaacatcaattg 7728497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 10778605 - 10778546
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctc 93  Q
    |||||||| ||||| |||||||||||||| | ||| |||||||||||| |||||| ||||    
T  10778605 tttcgcgcgtaaaattcaaaccgttaatcggattttgatgccgttttcgcctacacgctc 10778546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 34 - 88
Target Start/End: Complemental strand, 22883723 - 22883669
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctaca 88  Q
    |||||||| |||||  ||||||||||||| | ||| |||||||||||||||||||    
T  22883723 tttcgcgcgtaaaatgcaaaccgttaatcggattttgatgccgttttcacctaca 22883669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 547 - 581
Target Start/End: Complemental strand, 23234767 - 23234733
Alignment:
Q  547 ttttcactaaaccaacaacaacaatttatttcaca 581  Q
    ||||||| |||||||||||||||||||||||||||    
T  23234767 ttttcacaaaaccaacaacaacaatttatttcaca 23234733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 595 - 653
Target Start/End: Original strand, 24475595 - 24475653
Alignment:
Q  595 gaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaaca 653  Q
    |||| ||||| ||||||||||||||||| |||| | ||||| ||| |||||||||||||    
T  24475595 gaattatgcaaacccaagccatgaattatcatcaacaacatgactaaacaacaacaaca 24475653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 34 - 88
Target Start/End: Original strand, 35581652 - 35581706
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctaca 88  Q
    |||||||| |||||  ||||||||||||| | ||| |||||||||||||||||||    
T  35581652 tttcgcgcgtaaaatgcaaaccgttaatcggattttgatgccgttttcacctaca 35581706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 34 - 88
Target Start/End: Complemental strand, 36990410 - 36990356
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctaca 88  Q
    |||||||| |||||  ||||||||||||| | ||| |||||||||||||||||||    
T  36990410 tttcgcgcgtaaaatgcaaaccgttaatcggattttgatgccgttttcacctaca 36990356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 95
Target Start/End: Complemental strand, 21399220 - 21399159
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcct 95  Q
    |||||||| ||||| |||||||||||||| | ||| |||| ||||||| |||||| ||||||    
T  21399220 tttcgcgcgtaaaattcaaaccgttaatcggattttgatgtcgttttcgcctacacgctcct 21399159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 95
Target Start/End: Complemental strand, 21933020 - 21932959
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcct 95  Q
    |||||||| |||||  ||||||||||||| | ||| ||||| ||||||||||||||| ||||    
T  21933020 tttcgcgcgtaaaatgcaaaccgttaatcggattttgatgctgttttcacctacatgatcct 21932959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 95
Target Start/End: Complemental strand, 21939190 - 21939129
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcct 95  Q
    |||||||| |||||  ||||||||||||| | ||| ||||| ||||||||||||||| ||||    
T  21939190 tttcgcgcgtaaaatgcaaaccgttaatcggattttgatgctgttttcacctacatgatcct 21939129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 23514187 - 23514239
Alignment:
Q  43 taaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcct 95  Q
    ||||| |||||||||||||| | ||| |||||||||||| |||||| ||||||    
T  23514187 taaaattcaaaccgttaatcggattttgatgccgttttcgcctacacgctcct 23514239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 23982002 - 23981931
Alignment:
Q  163 cctcacacaaacactcattttccaaaacggttaacaaatgaattttcaaacgaaactcccgttttctcccaaa 235  Q
    ||||||| |||||||||||||| |||| |||| | ||  ||| ||||| ||||||||| ||||||||||||||    
T  23982002 cctcacataaacactcattttc-aaaatggttcataatcgaagtttcacacgaaactctcgttttctcccaaa 23981931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 434; Significance: 0; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 434; E-Value: 0
Query Start/End: Original strand, 12 - 660
Target Start/End: Complemental strand, 24386560 - 24385921
Alignment:
Q  12 atcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatc 111  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||| |||||| ||||    
T  24386560 atcagattttcaacttctacattttcgcgcataaaaatcaaaccgttaatccgttttcgatgtcgttttcacctacatgctcttaacacttagcactatc 24386461  T
Q  112 ataatgcacagaaaaatcccagtttcaacaacctcaaattcattttacaagcctcacacaaacactcattttccaaaacggttaacaaatgaattttcaa 211  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  24386460 ataatgcatagaaaaatctcagtttcaacaacctcaaattcattttacaaacctcacacaaacactcattttccaaaatggttaacaaatgaattttcaa 24386361  T
Q  212 acgaaactcccgttttctcccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaaccacataggc 311  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||     ||||||||| ||||||||||||||||||||||||||||||||||||| |    
T  24386360 acgaaactcccgttttctcccaaaacgacttgactgtcataaccac----aacataaaaacagaaattccatcaagtttaactcatccaaccacatagac 24386265  T
Q  312 aactcaatcaacaactttgtatatcaaatttca-ttttggtgcttcacatgaccatctagcacaattttaccaatacaaacaacnnnnnnnnncttcata 410  Q
    |||||| ||||||||||||||||||||||| || ||| ||| |||||||||| |||||||||||| || |||||||||||||||          ||||||    
T  24386264 aactcagtcaacaactttgtatatcaaattccactttgggttcttcacatgaacatctagcacaacttcaccaatacaaacaacttat------ttcata 24386171  T
Q  411 aaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacacaatatc 510  Q
    ||||||||||   ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||     
T  24386170 aaatggaatacttatgatatcattcaacaacaacaacatatctacttcaaccgcacttcatttagacatgaattcaaccataattcaacaacacaatatt 24386071  T
Q  511 caaatccaacaattgagtaaaactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcataccca 610  Q
    | ||||||||||||||| ||||| ||||||||  | ||||||| |||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||    
T  24386070 ccaatccaacaattgagcaaaacacataagtatccattttcaccaaaccaacaacaacaacttacttcataacaacaaaattatgaatcatgcataccca 24385971  T
Q  611 agccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  24385970 agccatgaattagcatccataaaatcacttaacaacaacaacatctattg 24385921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 428; E-Value: 0
Query Start/End: Original strand, 6 - 660
Target Start/End: Complemental strand, 16039703 - 16039059
Alignment:
Q  6 gacatcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagc 105  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||| |||||    
T  16039703 gacagcatgagattttcaacttctacgttttcgcgcataaaaatcaaaccattaatccgttttcgatgtcgttttcacctacatgctcctaacacttagc 16039604  T
Q  106 agtatcataatgcacagaaaaatcccagtttcaacaacctcaaattcattttacaagcctcacacaaacactcattttccaaaacggttaacaaatgaat 205  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16039603 actatcataatgcacagaaaaatcccagtttcaacaacctcaaattcattttacaagcctcacacaaacactcattttccaaaacggttaacaaatgaat 16039504  T
Q  206 tttcaaacgaaactcccgttttctcccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaaccac 305  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||||||     ||||||||| |||||||||||||||||||||||||||||||||    
T  16039503 tttcaaacgaaactcccattttctcccaaaacgactcgactaacataaccac----aacataaaaacagaaattccatcaagtttaactcatccaaccac 16039408  T
Q  306 ataggcaactcaatcaacaactttgtatatcaaatttca-ttttggtgcttcacatgaccatctagcacaattttaccaatacaaacaacnnnnnnnnnc 404  Q
    |||| ||||||| ||||||||||||||| | ||||| || ||  ||| |||||||||| |||||||||||| || ||||| |||||||||              
T  16039407 atagacaactcagtcaacaactttgtatgtaaaattccacttagggttcttcacatgaacatctagcacaacttcaccaacacaaacaacttat------ 16039314  T
Q  405 ttcataaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacac 504  Q
    |||||||||||| ||| |||||||||  |||||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  16039313 ttcataaaatgggatacccatgatatttttcaaccacaacaacatatctaattcaacaatacttcatttagacatgaattcaaccatcattcaacaacac 16039214  T
Q  505 aatatccaaatccaacaattgagtaaaactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgca 604  Q
    ||||||| ||||||||||||||| ||||| ||||||||| | ||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  16039213 aatatcctaatccaacaattgagcaaaacacataagtacccattttcaccaaaccaacaacaacaacttatttcacaacaac-aaattatgaatcatgca 16039115  T
Q  605 tacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    || ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  16039114 tatccaagccataaattagcatccataacatcacttaacaacaacaacatctattg 16039059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 409; E-Value: 0
Query Start/End: Original strand, 12 - 660
Target Start/End: Original strand, 273879 - 274520
Alignment:
Q  12 atcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatc 111  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| | ||||    
T  273879 atcagattttcaacctccacgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcacctacatgctcctaacacttagtactatc 273978  T
Q  112 ataatgcacagaaaaatcccagtttcaacaacctcaaattcattttacaagcctcacacaaacactcattttccaaaacggttaacaaatgaattttcaa 211  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  273979 ataatgcacagaaaaatccaagtttcaacaacctcaaagtcattttacaaacctcacacaaacactcattttccaaaacggttaacaattgaattttcaa 274078  T
Q  212 acgaaactcccgt----tttctcccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaaccacat 307  Q
    ||  ||||| |||    ||||||||||||||||||||||| |||||||||     ||||||||| ||||||||||||||||||||||||| |||||||||    
T  274079 ac-taactctcgttttctttctcccaaaacgactcgactagcataaccac----aacataaaaacagaaattccatcaagtttaactcattcaaccacat 274173  T
Q  308 aggcaactcaatcaacaactttgtatatcaaatttca-ttttggtgcttcacatgaccatctagcacaattttaccaatacaaacaacnnnnnnnnnctt 406  Q
     | ||||||| |||||||||||||||||||  ||||| ||| ||| |||||||||| |||||||||||| || |||||||||||||||          ||    
T  274174 cgacaactcagtcaacaactttgtatatcatttttcactttgggttcttcacatgaacatctagcacaacttcaccaatacaaacaacttat------tt 274267  T
Q  407 cataaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacacaa 506  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  274268 cataaaatggaatacacatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacacaa 274367  T
Q  507 tatccaaatccaacaattgagtaaaactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcata 606  Q
    ||||| ||||||||||||||| ||||| ||||||||  | ||||||| |||||||||||||||| ||||||||||||||| ||||||||| |||||||||    
T  274368 tatcccaatccaacaattgagcaaaacacataagtatccattttcaccaaaccaacaacaacaacttatttcacaacaac-aaattatgattcatgcata 274466  T
Q  607 cccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  274467 cccaagccatgaattagcatccataacatcacttaacaataacaacatctattg 274520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 409; E-Value: 0
Query Start/End: Original strand, 12 - 660
Target Start/End: Complemental strand, 641970 - 641329
Alignment:
Q  12 atcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatc 111  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| | ||||    
T  641970 atcagattttcaacctccacgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcacctacatgctcctaacacttagtactatc 641871  T
Q  112 ataatgcacagaaaaatcccagtttcaacaacctcaaattcattttacaagcctcacacaaacactcattttccaaaacggttaacaaatgaattttcaa 211  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  641870 ataatgcacagaaaaatccaagtttcaacaacctcaaagtcattttacaaacctcacacaaacactcattttccaaaacggttaacaattgaattttcaa 641771  T
Q  212 acgaaactcccgt----tttctcccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaaccacat 307  Q
    ||  ||||| |||    ||||||||||||||||||||||| |||||||||     ||||||||| ||||||||||||||||||||||||| |||||||||    
T  641770 ac-taactctcgttttctttctcccaaaacgactcgactagcataaccac----aacataaaaacagaaattccatcaagtttaactcattcaaccacat 641676  T
Q  308 aggcaactcaatcaacaactttgtatatcaaatttca-ttttggtgcttcacatgaccatctagcacaattttaccaatacaaacaacnnnnnnnnnctt 406  Q
     | ||||||| |||||||||||||||||||  ||||| ||| ||| |||||||||| |||||||||||| || |||||||||||||||          ||    
T  641675 cgacaactcagtcaacaactttgtatatcatttttcactttgggttcttcacatgaacatctagcacaacttcaccaatacaaacaacttat------tt 641582  T
Q  407 cataaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacacaa 506  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  641581 cataaaatggaatacacatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacacaa 641482  T
Q  507 tatccaaatccaacaattgagtaaaactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcata 606  Q
    ||||| ||||||||||||||| ||||| ||||||||  | ||||||| |||||||||||||||| ||||||||||||||| ||||||||| |||||||||    
T  641481 tatcccaatccaacaattgagcaaaacacataagtatccattttcaccaaaccaacaacaacaacttatttcacaacaac-aaattatgattcatgcata 641383  T
Q  607 cccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  641382 cccaagccatgaattagcatccataacatcacttaacaataacaacatctattg 641329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 401; E-Value: 0
Query Start/End: Original strand, 12 - 660
Target Start/End: Complemental strand, 827776 - 827135
Alignment:
Q  12 atcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatc 111  Q
    ||||||||||  || || ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| | ||||    
T  827776 atcagattttggacctccacgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcacctacatgctcctaacacttagtactatc 827677  T
Q  112 ataatgcacagaaaaatcccagtttcaacaacctcaaattcattttacaagcctcacacaaacactcattttccaaaacggttaacaaatgaattttcaa 211  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  827676 ataatgcacagaaaaatccaagtttcaacaacctcaaagtcattttacaaacctcacacaaacactcattttccaaaacggttaacaattgaattttcaa 827577  T
Q  212 acgaaactcccgt----tttctcccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaaccacat 307  Q
    ||  ||||| |||    ||||||||||||||||||||||| |||||||||     ||||||||| ||||||||||||||||||||||||| |||||||||    
T  827576 ac-taactctcgttttctttctcccaaaacgactcgactagcataaccac----aacataaaaacagaaattccatcaagtttaactcattcaaccacat 827482  T
Q  308 aggcaactcaatcaacaactttgtatatcaaatttca-ttttggtgcttcacatgaccatctagcacaattttaccaatacaaacaacnnnnnnnnnctt 406  Q
     | ||||||| |||||||||||||||||||  ||||| ||| ||| |||||||||| |||||||||||| || |||||||||||||||          ||    
T  827481 cgacaactcagtcaacaactttgtatatcatttttcactttgggttcttcacatgaacatctagcacaacttcaccaatacaaacaacttat------tt 827388  T
Q  407 cataaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacacaa 506  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  827387 cataaaatggaatacacatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacacaa 827288  T
Q  507 tatccaaatccaacaattgagtaaaactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcata 606  Q
    ||||| ||||||||||||||| ||||| ||||||||  | ||||||| |||||||||||||||| ||||||||||||||| ||||||||| |||||||||    
T  827287 tatcccaatccaacaattgagcaaaacacataagtatccattttcaccaaaccaacaacaacaacttatttcacaacaac-aaattatgattcatgcata 827189  T
Q  607 cccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  827188 cccaagccatgaattagcatccataacatcacttaacaataacaacatctattg 827135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 333; E-Value: 0
Query Start/End: Original strand, 32 - 660
Target Start/End: Original strand, 20481062 - 20481682
Alignment:
Q  32 gttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataatgcacagaaaaatccc 131  Q
    |||||||||| |||||| ||||||||||| | |||||||||||||||||| ||||||||||||| ||| ||| |  |||| ||||| |||||||||| |     
T  20481062 gttttcgcgcgtaaaaaccaaaccgttaacccgttttcgatgccgttttcgcctacatgctcctgacacttaaccctatcttaatgtacagaaaaattca 20481161  T
Q  132 agtttcaacaacctcaaattcattttacaa-gcctcacacaaacactcatttt-ccaaaacggttaacaaatgaattttcaaacgaaactcccgttttct 229  Q
    ||||||||||  | |||||||||||| ||| |||| |||||| |||||||||| |||||||||||||||| ||||||||||  |||||||||||||||||    
T  20481162 agtttcaacattcccaaattcattttccaaagccttacacaa-cactcatttttccaaaacggttaacaattgaattttcacccgaaactcccgttttct 20481260  T
Q  230 cccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaaccacataggcaactcaatcaacaacttt 329  Q
    ||||||||||||||||||||| ||| || || ||    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  20481261 cccaaaacgactcgactatcacaactacaaccta----aaaatagaaattccatcaagtttaactcatccaaccacatagacaactcaatcaacaacttt 20481356  T
Q  330 gtatatcaaatttcattttgg-tgcttcacatgaccatctagcacaattttaccaatacaaacaacnnnnnnnnncttcataaaatggaatatccatgat 428  Q
    ||||||||||||||| ||||| | |||||||||| ||||||| |||| || |||||||||||||||          |||||||||||||||  |||||||    
T  20481357 gtatatcaaatttcactttgggtccttcacatgaacatctagaacaacttcaccaatacaaacaacttat------ttcataaaatggaatgcccatgat 20481450  T
Q  429 atcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacacaatatccaaatccaacaa-ttgag 527  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||   |||||||||| |||||    
T  20481451 atcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattaaaaaacacaatataacaatccaacaatttgag 20481550  T
Q  528 taaaactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatc 627  Q
     ||||||||||||||| | ||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  20481551 caaaactcataagtacccattttcaccaaaccaacaacaacaacttatttcacaacaac-aaattatgaatcatgcatacccaagccatgaattaacatc 20481649  T
Q  628 cataacatcacttaacaacaacaacatctattg 660  Q
     | ||||| ||||||||||||||||||| ||||    
T  20481650 aacaacatgacttaacaacaacaacatcaattg 20481682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 404 - 653
Target Start/End: Original strand, 39115098 - 39115345
Alignment:
Q  404 cttcataaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaaca 503  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  39115098 cttcacaaaatggaatacccatgatatcattcaacaacaacaacatatctaattcaagaacacttcatttagacatgaattcaaccataattcaacaaca 39115197  T
Q  504 caatatccaaatccaacaattgagtaaaactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgc 603  Q
    |||||| | ||||||||||||||| ||||||||||| ||||| |||||||  ||||||||| ||||||||||||| ||||||  ||||||||||||||||    
T  39115198 caatattccaatccaacaattgagcaaaactcataaatactcattttcac-caaccaacaataacaatttatttctcaacaa-taaattatgaatcatgc 39115295  T
Q  604 atacccaagccatgaattagcatccataacatcacttaacaacaacaaca 653  Q
    |||| |||| ||||||||| |||| |  | || ||| |||||||||||||    
T  39115296 atacacaagtcatgaattatcatcaaccatatgactaaacaacaacaaca 39115345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 13721577 - 13721481
Alignment:
Q  20 ttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataat 116  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| || ||| |||||||||    
T  13721577 ttcaacttctacgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcgcctacatgctcctaacacttggcactatcataat 13721481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 16873700 - 16873604
Alignment:
Q  20 ttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataat 116  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| || ||| |||||||||    
T  16873700 ttcaacttctacgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcgcctacatgctcctaacacttggcactatcataat 16873604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 6 - 140
Target Start/End: Original strand, 23889410 - 23889544
Alignment:
Q  6 gacatcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagc 105  Q
    |||| ||||| ||||||||| |  || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| | |||||    
T  23889410 gacaacatcaaattttcaaccttcacattttcgcgcattaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgttcctaatatttagc 23889509  T
Q  106 agtatcataatgcacagaaaaatcccagtttcaac 140  Q
      |||||||||  |||||||||| | |||||||||    
T  23889510 cctatcataatctacagaaaaattcaagtttcaac 23889544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 6 - 140
Target Start/End: Complemental strand, 22584102 - 22583968
Alignment:
Q  6 gacatcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagc 105  Q
    |||||||| ||||||||||| |  ||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||| ||| |||||    
T  22584102 gacatcattagattttcaaccttcacgtttttgcgcataaaaaacaaaccgttaatctattttcgatgccgttttcacctacatgttcctgacacttagc 22584003  T
Q  106 agtatcataatgcacagaaaaatcccagtttcaac 140  Q
      |||||||||  ||| |||||| | |||||||||    
T  22584002 cctatcataatctacaaaaaaattcaagtttcaac 22583968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 3431931 - 3431835
Alignment:
Q  20 ttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataat 116  Q
    |||||||||||| |||||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| ||  || |||||||||    
T  3431931 ttcaacttctactttttcgtgcataaaaatcaaaccgttaatccgttttcgatgccgttttcgcctacatgctcctaacacttgacactatcataat 3431835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 11 - 117
Target Start/End: Original strand, 5080825 - 5080931
Alignment:
Q  11 catcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtat 110  Q
    ||||||||||||||| |  | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||  || |||| | |||    
T  5080825 catcagattttcaacctacatgttttcgcgcataaaaatcaaactgttaatctgttttcgatgccgttttcacctacatgttcctgccacttagtactat 5080924  T
Q  111 cataatg 117  Q
    |||||||    
T  5080925 cataatg 5080931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 13 - 140
Target Start/End: Original strand, 34302161 - 34302288
Alignment:
Q  13 tcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatca 112  Q
    ||||||||||||| |  ||||||||||||||||||| ||| ||||||| | |||||||||||||||||| |||||| |||||||||| |||||  |||||    
T  34302161 tcagattttcaacctgcacgttttcgcgcataaaaaccaagccgttaacccgttttcgatgccgttttcgcctacacgctcctaacacttagctctatca 34302260  T
Q  113 taatgcacagaaaaatcccagtttcaac 140  Q
    ||||  || ||||||| | |||||||||    
T  34302261 taatctacggaaaaattcaagtttcaac 34302288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 6 - 140
Target Start/End: Original strand, 26220156 - 26220290
Alignment:
Q  6 gacatcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagc 105  Q
    |||| ||||||||||||| | |  |||||||||||| |||||||||||||||||| | |||||||||||||||||  |||||  |||||| ||| |||||    
T  26220156 gacagcatcagattttcacccttcacgttttcgcgcctaaaaatcaaaccgttaacccgttttcgatgccgtttttgcctacgcgctcctgacacttagc 26220255  T
Q  106 agtatcataatgcacagaaaaatcccagtttcaac 140  Q
      |||||||||  ||||||||||  ||||||||||    
T  26220256 tctatcataatctacagaaaaatttcagtttcaac 26220290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 30 - 140
Target Start/End: Original strand, 23451100 - 23451210
Alignment:
Q  30 acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataatgcacagaaaaatc 129  Q
    |||||||||||| ||||||||||||||||||   |||||||||||||||||| |||||| |||||| ||| ||| |  |||||||||  ||||||||||     
T  23451100 acgttttcgcgcgtaaaaatcaaaccgttaactcgttttcgatgccgttttcgcctacacgctcctgacacttaactctatcataatctacagaaaaatt 23451199  T
Q  130 ccagtttcaac 140  Q
    | |||||||||    
T  23451200 caagtttcaac 23451210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 11 - 140
Target Start/End: Complemental strand, 26222724 - 26222595
Alignment:
Q  11 catcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtat 110  Q
    ||||||||||||| | |  | |||||||||| |||||||||||||||||| | |||||||||||||||||| |||||  |||||| ||| |||||  |||    
T  26222724 catcagattttcacccttcatgttttcgcgcctaaaaatcaaaccgttaacccgttttcgatgccgttttcgcctacgcgctcctgacacttagctctat 26222625  T
Q  111 cataatgcacagaaaaatcccagtttcaac 140  Q
    || |||  ||||||||||  ||||||||||    
T  26222624 cacaatctacagaaaaatttcagtttcaac 26222595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 548 - 660
Target Start/End: Original strand, 41246624 - 41246735
Alignment:
Q  548 tttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaaca 647  Q
    |||||| ||| || |||||||| || ||||| ||||||||||   |||||||||||| ||||||||||||||||| |||| | ||||| |||||||||||    
T  41246624 tttcaccaaaacaccaacaacatttcatttctcaacaacaaacc-atgaatcatgcaaacccaagccatgaattatcatcaacaacatgacttaacaaca 41246722  T
Q  648 acaacatctattg 660  Q
    |||||||| ||||    
T  41246723 acaacatcaattg 41246735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 551 - 653
Target Start/End: Complemental strand, 41507095 - 41506994
Alignment:
Q  551 cactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaaca 650  Q
    |||||||||| ||||||||||  ||||| |||||||||| | |||||||||||| ||||||||||||||||| |||| | || || ||| ||||||||||    
T  41507095 cactaaaccaccaacaacaatccatttctcaacaacaaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaatatgactaaacaacaaca 41506997  T
Q  651 aca 653  Q
    |||    
T  41506996 aca 41506994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 36 - 145
Target Start/End: Original strand, 24496237 - 24496346
Alignment:
Q  36 tcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataatgcacagaaaaatcccagtt 135  Q
    ||||||||||||| | ||||||||| | |||||||||| ||||||| |||||| |||||| ||| |||||  |||||||||  |||||||||| | ||||    
T  24496237 tcgcgcataaaaacctaaccgttaacccgttttcgatggcgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcaagtt 24496336  T
Q  136 tcaacaacct 145  Q
    ||||| ||||    
T  24496337 tcaaccacct 24496346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 584 - 660
Target Start/End: Original strand, 25122538 - 25122613
Alignment:
Q  584 aacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||||||| |||||||||||| ||||||||||||||||| |||| | ||||| ||| ||||||||||||||||||||    
T  25122538 aacaaaatcatgaatcatgca-acccaagccatgaattatcatcaacaacatgactaaacaacaacaacatctattg 25122613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 140
Target Start/End: Original strand, 3273499 - 3273626
Alignment:
Q  13 tcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatca 112  Q
    ||||||||||||| |  |||||| |||||||||||| |||| |||||| | ||||| |||||||||||| |||||| |||||| ||| |||||  |||||    
T  3273499 tcagattttcaaccttcacgtttccgcgcataaaaaccaaatcgttaacccgtttttgatgccgttttcgcctacacgctcctgacacttagctctatca 3273598  T
Q  113 taatgcacagaaaaatcccagtttcaac 140  Q
    || |  ||||| |||| | |||||||||    
T  3273599 tattctacagataaattcaagtttcaac 3273626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 404 - 486
Target Start/End: Original strand, 17502169 - 17502252
Alignment:
Q  404 cttcataaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaac-acttcatttagacatgaattca 486  Q
    ||||| ||||||||||| ||||| ||  | ||||||||||||||||||||| ||||||||| |||||||||| |||||||||||    
T  17502169 cttcacaaaatggaatacccatggtacaaatcaacaacaacaacatatctaattcaacaacaacttcatttaaacatgaattca 17502252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 596 - 660
Target Start/End: Complemental strand, 39447000 - 39446936
Alignment:
Q  596 aatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||||||||||||||||||||||||||  ||| | ||||||||||| ||||||||||||| ||||    
T  39447000 aatcatgcatacccaagccatgaattattatcaacaacatcacttagcaacaacaacatcaattg 39446936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 562 - 660
Target Start/End: Original strand, 21680982 - 21681079
Alignment:
Q  562 caacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    ||||||||  ||||||| | |||||||| | |||||||||||||||||||||||||||||| |||| | |||||||| || ||  ||||||||| ||||    
T  21680982 caacaacatcttatttctccacaacaaa-tcatgaatcatgcatacccaagccatgaattatcatcaacaacatcacataccagtaacaacatcaattg 21681079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 588 - 660
Target Start/End: Complemental strand, 20573434 - 20573362
Alignment:
Q  588 aaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||| |||||||||||| ||||||||||||||||| |||| | ||||| || || ||||||||||||| ||||    
T  20573434 aaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaacaacaacatcaattg 20573362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 548 - 660
Target Start/End: Original strand, 23837164 - 23837275
Alignment:
Q  548 tttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaaca 647  Q
    |||||| |||||| || |||||| | ||||| || ||||||| | |||||| ||| ||||||||||||||||| | || | | ||||||||||| |||||    
T  23837164 tttcacaaaaccaccaccaacaactcatttctcatcaacaaa-tcatgaattatgaatacccaagccatgaatcatcaacaacaacatcacttagcaaca 23837262  T
Q  648 acaacatctattg 660  Q
    |||||||| ||||    
T  23837263 acaacatcaattg 23837275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 588 - 660
Target Start/End: Original strand, 38533654 - 38533726
Alignment:
Q  588 aaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||| |||||| ||||| ||||||||||||||||| |||| | |||||||| || ||||||||||||| ||||    
T  38533654 aaatcatgaattatgcacacccaagccatgaattatcatcaacaacatcacctagcaacaacaacatcaattg 38533726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 6 - 116
Target Start/End: Complemental strand, 17611734 - 17611623
Alignment:
Q  6 gacatcatcagattttcaacttct-acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattag 104  Q
    |||| |||||||||||| | || | |||||||||||  |||||  ||||||||||| | |||||||||||||||||| |||||| |||||| ||| |||     
T  17611734 gacaacatcagattttctaattttcacgttttcgcgtgtaaaatccaaaccgttaacccgttttcgatgccgttttcgcctacacgctcctgacacttaa 17611635  T
Q  105 cagtatcataat 116  Q
    |  |||||||||    
T  17611634 ctctatcataat 17611623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 588 - 655
Target Start/End: Complemental strand, 20567400 - 20567333
Alignment:
Q  588 aaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatc 655  Q
    |||| |||||||||||| ||||||||||||||||| |||| | ||||| || || |||||||||||||    
T  20567400 aaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaacaacaacatc 20567333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 588 - 655
Target Start/End: Complemental strand, 20573593 - 20573526
Alignment:
Q  588 aaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatc 655  Q
    |||| |||||||||||| ||||||||||||||||| |||| | ||||| || || |||||||||||||    
T  20573593 aaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaacaacaacatc 20573526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 65 - 140
Target Start/End: Original strand, 24979780 - 24979855
Alignment:
Q  65 ttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataatgcacagaaaaatcccagtttcaac 140  Q
    ||||||||||||||||| |||||| |||||| ||| |||||  |||||||||  |||||||||| | |||||||||    
T  24979780 ttttcgatgccgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcaagtttcaac 24979855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 6 - 93
Target Start/End: Complemental strand, 30766354 - 30766267
Alignment:
Q  6 gacatcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctc 93  Q
    |||| |||||||||||| || |  |||||||||||| |||||| | ||||||||| | |||||| ||||||||||| |||||| ||||    
T  30766354 gacagcatcagattttcgaccttcacgttttcgcgcgtaaaaacccaaccgttaacccgttttcaatgccgttttcgcctacacgctc 30766267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 562 - 653
Target Start/End: Original strand, 37611648 - 37611738
Alignment:
Q  562 caacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaaca 653  Q
    |||||||| || ||||| | | |||||||| |||||| ||||| ||||||||||||||||| |||| |  |||| |||||||||||||||||    
T  37611648 caacaacatttcatttctccataacaaaatcatgaattatgca-acccaagccatgaattatcatcaaccacatgacttaacaacaacaaca 37611738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 643921 - 643982
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcct 95  Q
    |||||||| |||||  ||||||||||||| | ||| ||||||||||||||||||||| ||||    
T  643921 tttcgcgcgtaaaatgcaaaccgttaatcggattttgatgccgttttcacctacatgatcct 643982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 95
Target Start/End: Complemental strand, 13662903 - 13662842
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcct 95  Q
    |||||||| ||||| |||||||||||||| | ||| |||||||||||| |||||| ||||||    
T  13662903 tttcgcgcgtaaaattcaaaccgttaatcggattttgatgccgttttcgcctacacgctcct 13662842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 555 - 660
Target Start/End: Complemental strand, 23226350 - 23226246
Alignment:
Q  555 aaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacat 654  Q
    |||||||||||||||||  ||||| | | ||  |||| |||||| ||| ||||||||||||||||| | || | | || |||||||||||||||||||||    
T  23226350 aaaccaacaacaacaatccatttctc-ataatcaaatcatgaattatgaatacccaagccatgaatcatcaacaacaatatcacttaacaacaacaacat 23226252  T
Q  655 ctattg 660  Q
    | ||||    
T  23226251 caattg 23226246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 125
Target Start/End: Original strand, 17501807 - 17501898
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataatgcacagaaa 125  Q
    |||||||| ||||| |||||||||||||| | ||| |||||||||||| |||||| || ||| ||| || ||  |||||||||  |||||||    
T  17501807 tttcgcgcgtaaaattcaaaccgttaatcggattttgatgccgttttcgcctacacgcccctgacacttggctctatcataatctacagaaa 17501898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 560 - 655
Target Start/End: Complemental strand, 38635917 - 38635823
Alignment:
Q  560 aacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatc 655  Q
    ||||||||||| || |||| || ||||||| |||||| ||||| | ||||||||||||||| | || | | || ||| ||||||||||||||||||    
T  38635917 aacaacaacaacttgtttctcatcaacaaa-ttatgattcatgaacacccaagccatgaatcatcaacaacaatatctcttaacaacaacaacatc 38635823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 34 - 88
Target Start/End: Complemental strand, 272000 - 271946
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctaca 88  Q
    |||||||| |||||  ||||||||||||| | ||| |||||||||||||||||||    
T  272000 tttcgcgcgtaaaatgcaaaccgttaatcggattttgatgccgttttcacctaca 271946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 34 - 88
Target Start/End: Original strand, 829655 - 829709
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctaca 88  Q
    |||||||| |||||  ||||||||||||| | ||| |||||||||||||||||||    
T  829655 tttcgcgcgtaaaatgcaaaccgttaatcggattttgatgccgttttcacctaca 829709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 555 - 617
Target Start/End: Complemental strand, 24717144 - 24717083
Alignment:
Q  555 aaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatg 617  Q
    |||||| ||||||||||  ||||  |||||||||| |||||||||||||| ||||||||||||    
T  24717144 aaaccaccaacaacaatccatttatcaacaacaaa-ttatgaatcatgcaaacccaagccatg 24717083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 4233523 - 4233584
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcct 95  Q
    |||||||| ||||| |||||||||||||| | ||| |||| ||||||| |||||| ||||||    
T  4233523 tttcgcgcgtaaaattcaaaccgttaatcggattttgatgtcgttttcgcctacacgctcct 4233584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 588 - 660
Target Start/End: Complemental strand, 20648071 - 20647999
Alignment:
Q  588 aaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||| |||||||||||| |||||||||||| |||| |||| | ||||| || || ||||||| ||||| ||||    
T  20648071 aaatcatgaatcatgcaaacccaagccatggattaacatcaacaacatgacctagcaacaacgacatcaattg 20647999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 588 - 660
Target Start/End: Complemental strand, 20654147 - 20654075
Alignment:
Q  588 aaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||| |||||||||||| |||||||| |||||||| |||| | ||||| || || ||||||| ||||| ||||    
T  20654147 aaatcatgaatcatgcaaacccaagcaatgaattaacatcaacaacatgacctagcaacaacgacatcaattg 20654075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 439 - 486
Target Start/End: Original strand, 24239655 - 24239703
Alignment:
Q  439 aacaacaacatatctacttcaacaac-acttcatttagacatgaattca 486  Q
    |||||||||||||||| |||| |||| |||||||||| |||||||||||    
T  24239655 aacaacaacatatctaattcagcaacaacttcatttaaacatgaattca 24239703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 432; Significance: 0; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 432; E-Value: 0
Query Start/End: Original strand, 6 - 660
Target Start/End: Complemental strand, 42057112 - 42056467
Alignment:
Q  6 gacatcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagc 105  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||    
T  42057112 gacaacatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgtcgttttcacctacatgctcctaacacttagc 42057013  T
Q  106 agtatcataatgcacagaaaaatcccagtttcaacaacctcaaattcattttacaagcctcacacaaacactcattttccaaaacggttaacaaatgaat 205  Q
    | ||||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  42057012 actatcataatgcacagaaaaatcctagttttaacaacctcaaattcattttacaaacctcacacaaacactcattttccaaaacggttaacaattgaat 42056913  T
Q  206 tttcaaacgaaactcccgttttctcccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaaccac 305  Q
    |||||||||||||||||||||||| ||||||||||||||||| | ||||||      ||||||||| | ||||||||||||||||||||||||||| |||    
T  42056912 tttcaaacgaaactcccgttttcttccaaaacgactcgactaacgtaacca----taacataaaaacataaattccatcaagtttaactcatccaatcac 42056817  T
Q  306 ataggcaactcaatcaacaactttgtatatcaaatttca-ttttggtgcttcacatgaccatctagcacaattttaccaatacaaacaacnnnnnnnnnc 404  Q
    |||| ||||||| |||||||||||||||||||||||||| ||| ||| |||||| ||| |||||||||||| || |||||||||||||||              
T  42056816 atagacaactcagtcaacaactttgtatatcaaatttcactttgggttcttcacttgaacatctagcacaacttcaccaatacaaacaacttat------ 42056723  T
Q  405 ttcataaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacac 504  Q
    ||||||||||||||||  |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42056722 ttcataaaatggaatactcatgatatcattcaaggacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacac 42056623  T
Q  505 aatatccaaatccaacaattgagtaaaactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgca 604  Q
    ||||||| ||||||||||||||| ||||| ||||| ||  | ||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  42056622 aatatcccaatccaacaattgagcaaaacacataattatccattttcaccaaactaacaacaacaacttatttcacaacaacaaaattatgaatcatgca 42056523  T
Q  605 tacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  42056522 tacccaagccatgaattagcattcataatatcacttaacaacaacaacatctattg 42056467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 423; E-Value: 0
Query Start/End: Original strand, 11 - 660
Target Start/End: Original strand, 2028359 - 2028998
Alignment:
Q  11 catcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtat 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |  | ||| |||||  |||    
T  2028359 catcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacttgtttatgacacttagccctat 2028458  T
Q  111 cataatgcacagaaaaatcccagtttcaacaacctcaaattcattttacaagcctcacacaaacactcattttccaaaacggttaacaaatgaattttca 210  Q
    | ||||| |||||||||  | |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  2028459 cttaatgtacagaaaaagtcaagtttcaacatcctcaaattcattttacaaacctcacacaaacactcattttccaaaacggttaacaaataaattttca 2028558  T
Q  211 aacgaaactcccgttttctcccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaaccacatagg 310  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||     ||||||||| |||||||||||||||||||||||||||||||||||||     
T  2028559 aacgaaattcccgttttctcccaaaacgactcgactatcataaccac----aacataaaaacagaaattccatcaagtttaactcatccaaccacataga 2028654  T
Q  311 caactcaatcaacaactttgtatatcaaatttca-ttttggtgcttcacatgaccatctagcacaattttaccaatacaaacaacnnnnnnnnncttcat 409  Q
    ||||||| ||||||||||||||||||||||| || ||| ||| |||||||||| |||||||||||| || ||  |||||||||||          |||||    
T  2028655 caactcagtcaacaactttgtatatcaaattccactttgggttcttcacatgaacatctagcacaacttcactgatacaaacaacttat------ttcat 2028748  T
Q  410 aaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacacaatat 509  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2028749 aaaatggaata-ccctgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacacaatat 2028847  T
Q  510 ccaaatccaacaattgagtaaaactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcataccc 609  Q
    |||||||||||||||||| ||||| ||||||||  | ||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  2028848 ccaaatccaacaattgagcaaaacacataagtatccattttcatcaaaccaacaacaacaacttatttcacaacaacaaaattatgaatcatgcataccc 2028947  T
Q  610 aagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    ||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  2028948 aagtcatgaattagcatccataacatcacttaacaacgacaacatctattg 2028998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 406; E-Value: 0
Query Start/End: Original strand, 6 - 660
Target Start/End: Complemental strand, 2190998 - 2190364
Alignment:
Q  6 gacatcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagc 105  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||| |||||    
T  2190998 gacagcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaattcgttttcgatgccgttttcgcctacatgctcctaacacttagc 2190899  T
Q  106 agtatcataatgcacagaaaaatcccagtttcaacaacctcaaattcattttacaagcctcacacaaacactcattttccaaaacggttaacaaatgaat 205  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||    
T  2190898 actatcataatgcacagaaaaatcccagtttcaacaacctcaaattcattttacaaacctcacacaaacactcgttttccaaatcggttaacaaatgaat 2190799  T
Q  206 tttcaaacgaaactcccgttttctcccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaaccac 305  Q
    |||||||||||||||||||||||| ||||||||||||||||| | ||||||      ||||||||| |||||||||||||||||||||||||||||||||    
T  2190798 tttcaaacgaaactcccgttttcttccaaaacgactcgactaacgtaacca----taacataaaaacagaaattccatcaagtttaactcatccaaccac 2190703  T
Q  306 ataggcaactcaatcaacaactttgtatatcaaatttca-ttttggtgcttcacatgaccatctagcacaattttaccaatacaaacaacnnnnnnnnnc 404  Q
    |||| ||||||| |||||||||||||||||||||||||| ||| ||| |||||| ||| |||||||||||| || |||||||||||||||              
T  2190702 atagacaactcagtcaacaactttgtatatcaaatttcactttgggttcttcacttgaacatctagcacaacttcaccaatacaaacaacttat------ 2190609  T
Q  405 ttcataaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacac 504  Q
    ||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||           |||||||||||||    
T  2190608 ttcataaaatggaatactcatgatatcattcaagaacaacaacatatctacttcaacaacacttcatgtagacatg-----------aattcaacaacac 2190520  T
Q  505 aatatccaaatccaacaattgagtaaaactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgca 604  Q
    ||||||| ||||||||||||||| ||||| ||||||||  | ||||||| |||| ||||||||||| ||| |||||||||||||||||||||||||||||    
T  2190519 aatatcccaatccaacaattgagcaaaacacataagtatccattttcaccaaactaacaacaacaacttacttcacaacaacaaaattatgaatcatgca 2190420  T
Q  605 tacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  2190419 tacccaagccatgaattagcatccataacatcacttaacaacatcaacatctattg 2190364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 329; E-Value: 0
Query Start/End: Original strand, 14 - 660
Target Start/End: Original strand, 3894477 - 3895102
Alignment:
Q  14 cagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcat 113  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||  | | ||| |||||  |||| |    
T  3894477 cagattttcaacctccacgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcacctacgtgtccatgacatttagccctatctt 3894576  T
Q  114 aatgcacagaaaaatcccagtttcaacaacctcaaattcattttacaa-gcctcacacaaacactcatttt-ccaaaacggttaacaaatgaattttcaa 211  Q
    |||| |||||||||| |       ||||  | |||||||||||| ||| || | |||||| |||||||||| |||||||||||||||| ||||||||||     
T  3894577 aatgtacagaaaaatac-------aacattcccaaattcattttccaaagctttacacaa-cactcatttttccaaaacggttaacaattgaattttcac 3894668  T
Q  212 acgaaactcccgttttctcccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaaccacataggc 311  Q
     |||||| | |  ||||||||||| |||||||||||||| ||| || |||||    |||| ||||||||||||||||||||||||||||||||||||| |    
T  3894669 ccgaaaccctcaatttctcccaaa-cgactcgactatcacaactacaacata----aaaacagaaattccatcaagtttaactcatccaaccacatagac 3894763  T
Q  312 aactcaatcaacaactttgtatatcaaatttcattttggtgcttcacatgaccatctagcacaattttaccaatacaaacaacnnnnnnnnncttcataa 411  Q
    |||||| |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| |    |||||||||||||          |||||||    
T  3894764 aactcagtcaacaactttgtatatcaaatttcactttggtccttcacatgaccatctagcacaacta---caatacaaacaacttat------ttcataa 3894854  T
Q  412 aatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacacaatatcc 511  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  3894855 aatggaatacccatgatatcattcaacaacaacaacatatctaattcaacaacacttcatttagacatgaattcaaccataattcaacaacacaatattt 3894954  T
Q  512 aaatccaacaattgagtaaaactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaa 611  Q
     ||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||    
T  3894955 caatccaacaattgagcaaaactcataagtactcattttcaccaaaccaacaacaacaacttattttacaacaac-aaattatgaatcatgcatacccaa 3895053  T
Q  612 gccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  3895054 gccatgaattagcatccataacatcacttaacaacaacaacatctattg 3895102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 14 - 660
Target Start/End: Complemental strand, 26071070 - 26070434
Alignment:
Q  14 cagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcat 113  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || || | ||| |||||  |||| |    
T  26071070 cagattttcaacctcaacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccattttcacctacgtgttcatgacacttagccctatctt 26070971  T
Q  114 aatgcacagaaaaatcccagtttcaacaacctcaaattcattttac-aagcctcacacaaacactca-ttttccaaaacggttaacaaatgaattttcaa 211  Q
    |||| |||||||||| | ||||||||||  | |||||||||||| | |||||| || | |||||||| |||||||||||||||||||| ||||||||||     
T  26070970 aatgtacagaaaaattcaagtttcaacattcccaaattcattttccaaagccttac-ccaacactcatttttccaaaacggttaacaattgaattttcac 26070872  T
Q  212 acgaaactcccgttttctcccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaaccacataggc 311  Q
     |||||| |||| ||| |||| ||||||||||||||||| ||| ||     ||||||||| ||||||||||||||||||||||||||||||||||||| |    
T  26070871 ccgaaacccccgatttttccc-aaacgactcgactatcacaactac----aacataaaaacagaaattccatcaagtttaactcatccaaccacatagac 26070777  T
Q  312 aactcaatcaacaactttgtatatcaaatttca-ttttggtgcttcacatgaccatctagcacaattttaccaatacaaacaacnnnnnnnnncttcata 410  Q
    |||||| |||||||||||||||||||||||||| ||| ||| |||||||||| |||||||||||| || |||||||||||||||         |||||||    
T  26070776 aactcagtcaacaactttgtatatcaaatttcactttgggtccttcacatgaacatctagcacaacttcaccaatacaaacaac-------aacttcata 26070684  T
Q  411 aaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacacaatatc 510  Q
    |||||||||| ||||| |||||||||||||||| ||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  26070683 aaatggaatacccatggtatcattcaacaacaaaaacatatctaaatcaacaatacttcatttagacatgaattcaaccataattcaacaacacaatatc 26070584  T
Q  511 caaatccaacaa-ttgagtaaaactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcataccc 609  Q
      |||||||||| ||||| ||||||||||||||| | ||||||| |||| ||||||||||| ||||||| ||||||| |||| |||||||||||||||||    
T  26070583 tcaatccaacaatttgagcaaaactcataagtacccattttcaccaaactaacaacaacaacttatttctcaacaac-aaatcatgaatcatgcataccc 26070485  T
Q  610 aagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    ||||||||||| | |||||| ||||||||||| ||||||||||||| ||||    
T  26070484 aagccatgaataatcatccacaacatcacttagcaacaacaacatcaattg 26070434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 14 - 660
Target Start/End: Complemental strand, 26094857 - 26094221
Alignment:
Q  14 cagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcat 113  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || || | ||| |||||  |||| |    
T  26094857 cagattttcaacctcaacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccattttcacctacgtgttcatgacacttagccctatctt 26094758  T
Q  114 aatgcacagaaaaatcccagtttcaacaacctcaaattcattttac-aagcctcacacaaacactca-ttttccaaaacggttaacaaatgaattttcaa 211  Q
    |||| |||||||||| | ||||||||||  | |||||||||||| | |||||| || | |||||||| |||||||||||||||||||| ||||||||||     
T  26094757 aatgtacagaaaaattcaagtttcaacattcccaaattcattttccaaagccttac-ccaacactcatttttccaaaacggttaacaattgaattttcac 26094659  T
Q  212 acgaaactcccgttttctcccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaaccacataggc 311  Q
     |||||| |||| ||| |||| ||||||||||||||||| ||| ||     ||||||||| ||||||||||||||||||||||||||||||||||||| |    
T  26094658 ccgaaacccccgatttttccc-aaacgactcgactatcacaactac----aacataaaaacagaaattccatcaagtttaactcatccaaccacatagac 26094564  T
Q  312 aactcaatcaacaactttgtatatcaaatttca-ttttggtgcttcacatgaccatctagcacaattttaccaatacaaacaacnnnnnnnnncttcata 410  Q
    |||||| |||||||||||||||||||||||||| ||| ||| |||||||||| |||||||||||| || |||||||||||||||         |||||||    
T  26094563 aactcagtcaacaactttgtatatcaaatttcactttgggtccttcacatgaacatctagcacaacttcaccaatacaaacaac-------aacttcata 26094471  T
Q  411 aaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacacaatatc 510  Q
    |||||||||| ||||| |||||||||||||||| ||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  26094470 aaatggaatacccatggtatcattcaacaacaaaaacatatctaaatcaacaatacttcatttagacatgaattcaaccataattcaacaacacaatatc 26094371  T
Q  511 caaatccaacaa-ttgagtaaaactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcataccc 609  Q
      |||||||||| ||||| ||||||||||||||| | ||||||| |||| ||||||||||| ||||||| ||||||| |||| |||||||||||||||||    
T  26094370 tcaatccaacaatttgagcaaaactcataagtacccattttcaccaaactaacaacaacaacttatttctcaacaac-aaatcatgaatcatgcataccc 26094272  T
Q  610 aagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    ||||||||||| | |||||| ||||||||||| ||||||||||||| ||||    
T  26094271 aagccatgaataatcatccacaacatcacttagcaacaacaacatcaattg 26094221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 309; E-Value: 1e-174
Query Start/End: Original strand, 6 - 660
Target Start/End: Original strand, 3049019 - 3049660
Alignment:
Q  6 gacatcatcagattttcaacttct-acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattag 104  Q
    |||| |||||||||||| | || | |||||||||||  |||||| ||||||||||| |||||||||||||||||||| |||||| |||||| ||| ||||    
T  3049019 gacaacatcagattttccaattttcacgttttcgcgagtaaaaaccaaaccgttaacctgttttcgatgccgttttcgcctacacgctcctgacacttag 3049118  T
Q  105 cagtatcataatgcacagaaaaatcccagtttcaacaacctcaaattcattttac-aagcctcacacaaacactca-ttttccaaaacggttaacaaatg 202  Q
    |  |||| ||||| |||||||||| | ||||||||||  | |||||||||||| | |||||| |||| |||||||| |||||||||||||||||||| ||    
T  3049119 ccctatcttaatgtacagaaaaattcaagtttcaacattcccaaattcattttccaaagccttacac-aacactcatttttccaaaacggttaacaattg 3049217  T
Q  203 aattttcaaacgaaactcccgttttctcccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaac 302  Q
    ||||||||  ||||||| || ||||||||||||||||||||||||||| ||| ||     || |||||| |||||| |||||||||||||||||||||||    
T  3049218 aattttcacccgaaacttccattttctcccaaaacgactcgactatcacaactac----aacctaaaaacagaaatcccatcaagtttaactcatccaac 3049313  T
Q  303 cacataggcaactcaatcaacaactttgtatatcaaatttca-ttttggtgcttcacatgaccatctagcacaattttaccaatacaaacaacnnnnnnn 401  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||| ||| ||||||| || |||||||||||| || |||||||||||||||           
T  3049314 cacatagacaactcaatcaacaactttgtatatcaaatttcactttgggtccttcacaggaacatctagcacaacttcaccaatacaaacaacttat--- 3049410  T
Q  402 nncttcataaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaa 501  Q
       |||||||||||| ||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  3049411 ---ttcataaaatgggatgcccatgatatcattcgacaacaacaacatatctacttcaacaacacttcatttaggcatgaattcaaccataattcaacaa 3049507  T
Q  502 cacaatatccaaatccaacaa-ttgagtaaaactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatca 600  Q
    |||||| | | |||||||||| ||||| ||||||||||||||| | ||||||| ||      |||||||| ||||||||||||||| |||||||||||||    
T  3049508 cacaatgttccaatccaacaatttgagcaaaactcataagtacccattttcacgaa------aacaacaacttatttcacaacaac-aaattatgaatca 3049600  T
Q  601 tgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  3049601 tgcatacccaagccatgaattaacatccataacatcacttaacaacaacaacatctattg 3049660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 290; E-Value: 1e-162
Query Start/End: Original strand, 6 - 454
Target Start/End: Complemental strand, 15525388 - 15524949
Alignment:
Q  6 gacatcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagc 105  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||| ||||||| ||||||||| ||||     
T  15525388 gacagcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatccgtttgcaatgccgttttcgcctacattctcctaacacttagt 15525289  T
Q  106 agtatcataatgcacagaaaaatcccagtttcaacaacctcaaattcattttacaagcctcacacaaacactcattttccaaaacggttaacaaatgaat 205  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15525288 actatcataatgcacagaaaaatcccagtttcaacaacctcaaattcattttacaagcctcacacaaacactcattttccaaaacggttaacaaatgaat 15525189  T
Q  206 tttcaaacgaaactcccgttttctcccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaaccac 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||     ||||||||| ||||||||||||||||||||||||||||||||     
T  15525188 tttcaaacgaaactcccgttttctcccaaaacgactcgactatcataaccac----aacataaaaacagaaattccatcaagtttaactcatccaaccat 15525093  T
Q  306 ataggcaactcaatcaacaactttgtatatcaaatttca-ttttggtgcttcacatgaccatctagcacaattttaccaatacaaacaacnnnnnnnnnc 404  Q
    |||| ||||||| |||||||| ||||||||||||||| | ||| ||| |||||| ||| |||||||||||| || |||||||||||||||              
T  15525092 atagacaactcagtcaacaaccttgtatatcaaattttactttgggttcttcacttgaacatctagcacaacttcaccaatacaaacaacttat------ 15524999  T
Q  405 ttcataaaatggaatatccatgatatcattcaacaacaacaacatatcta 454  Q
    ||||||||||||||||  ||||||||||||||| ||||||||||||||||    
T  15524998 ttcataaaatggaatactcatgatatcattcaataacaacaacatatcta 15524949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 14 - 653
Target Start/End: Complemental strand, 112081 - 111454
Alignment:
Q  14 cagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcat 113  Q
    |||||||||||| || |||||||||||||||| |||||||||||||||| |||||| ||||||||||||||||| || || | ||| |||||  |||| |    
T  112081 cagattttcaacctccacgttttcgcgcataataatcaaaccgttaatccgttttcaatgccgttttcacctacgtgttcatgacacttagccctatctt 111982  T
Q  114 aatgcacagaaaaatcccagtttcaacaacctcaaattcattttacaa-gcctcacacaaacactcattttcc-aaaacggttaacaaatgaattttcaa 211  Q
    | || |||||||||| | ||||||||||  |   |||||||||| ||| |||| |||||| |||||||||| | |||||||||||||| ||||||||||     
T  111981 agtgtacagaaaaattcaagtttcaacattccataattcatttttcaaagccttacacaa-cactcatttttcgaaaacggttaacaattgaattttcac 111883  T
Q  212 acgaaactcccgttttctcccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaaccacataggc 311  Q
     |||||| |||| ||||||||||| |||||||||||||| ||| || |||||    |||| |||||||||||||||||||||| ||||||||||||||      
T  111882 ccgaaacccccgatttctcccaaa-cgactcgactatcacaactacaacata----aaaacagaaattccatcaagtttaacttatccaaccacatagat 111788  T
Q  312 aactcaatcaacaactttgtatatcaaatttcattttggtgctt-cacatgaccatctagcacaattttaccaatacaaacaacnnnnnnnnncttcata 410  Q
    | |||  |||||||||||||||||||||||||| |||||  ||| |||||||| ||||| ||||| ||  ||||||||||||||          ||||||    
T  111787 a-ctcggtcaacaactttgtatatcaaatttcactttgggtctttcacatgacgatctaacacaacttccccaatacaaacaacttat------ttcata 111695  T
Q  411 aaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacacaatatc 510  Q
    |||||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  111694 aaatggaatacccatgatatcattcaacaacaacaacatgtctatttcaacaacacttcatttagacatgaattcaaccataattcaacaacaccatatc 111595  T
Q  511 caaatccaacaattgagtaaaactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcataccca 610  Q
    | ||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||  | |||||||||||||||||    
T  111594 ccaatccaacaattgagcaaaactcataagtactcattttcaccaaaccaacaacaacaatttatttctcaacaacaaa--tttgaatcatgcataccca 111497  T
Q  611 agccatgaattagcatccataacatcacttaacaacaacaaca 653  Q
    |||||||||||| |||| |  | || ||| |||||||||||||    
T  111496 agccatgaattatcatcaaccatatgactaaacaacaacaaca 111454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 30 - 484
Target Start/End: Complemental strand, 13866553 - 13866110
Alignment:
Q  30 acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataatgcacagaaaaatc 129  Q
    |||||||||||| |||||| ||||||||||| |||||||||||| ||||||| |||||| |||||| ||| |||||  |||| ||| | || |||||||     
T  13866553 acgttttcgcgcgtaaaaaccaaaccgttaaactgttttcgatgtcgttttcgcctacacgctcctgacacttagctctatcttaaagtaccgaaaaatt 13866454  T
Q  130 ccagtttcaacaacctcaaattcattttac-aagcctcacacaaacactca-ttttccaaaacggttaacaaatgaattttcaaacgaaactcccgtttt 227  Q
    |||| |||||||||| |||||||||||| | |||||| ||||||||||||| |||||||||||||||||||| ||||||||||  |||||||| || |||    
T  13866453 ccag-ttcaacaaccccaaattcattttccaaagccttacacaaacactcatttttccaaaacggttaacaattgaattttcacccgaaactctcgattt 13866355  T
Q  228 ctcccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaaccacataggcaactcaatcaacaact 327  Q
    ||||| ||||||||||||||||| ||| |  ||||     |||| ||||||||||||||||||||||||||||||||||| | ||||||| |||| ||||    
T  13866354 ctccc-aaacgactcgactatcacaactaaaacat-----aaaacagaaattccatcaagtttaactcatccaaccacattgacaactcagtcaaaaact 13866261  T
Q  328 ttgtatatcaaatttcatttt-ggtgcttcacatgaccatctagcacaattttaccaatacaaacaacnnnnnnnnncttcataaaatggaatatccatg 426  Q
    ||||||||||||||||||||| ||| ||||| |||| |||||||||||| || |||||||||||||||         ||||||||||||||||| |||||    
T  13866260 ttgtatatcaaatttcattttgggtccttcatatgaacatctagcacaacttcaccaatacaaacaac-------aacttcataaaatggaatacccatg 13866168  T
Q  427 atatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaatt 484  Q
     ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  13866167 gtataattcaacaacaacaacatatctaattcaacaacacttcatttagacatgaatt 13866110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 170; E-Value: 7e-91
Query Start/End: Original strand, 412 - 653
Target Start/End: Complemental strand, 32494471 - 32494231
Alignment:
Q  412 aatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacacaatatcc 511  Q
    ||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32494471 aatggaatacccatgatatcattctacaacaacaacatatctaattcaacaacacttcatttagacatgaattcaaccataattcaacaacacaatatcc 32494372  T
Q  512 aaatccaacaattgagtaaaactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaa 611  Q
     ||||||||||||||| ||||||||||||||| | ||||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||    
T  32494371 caatccaacaattgagcaaaactcataagtacccattttcaccaaaccaacaacaacaatttatttctcaacaac-aaattatgaatcatgcatacacaa 32494273  T
Q  612 gccatgaattagcatccataacatcacttaacaacaacaaca 653  Q
    ||||||||||| |||| || | || ||| |||||||||||||    
T  32494272 gccatgaattatcatcaatcatatgactaaacaacaacaaca 32494231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 145; E-Value: 6e-76
Query Start/End: Original strand, 311 - 655
Target Start/End: Complemental strand, 12370350 - 12370015
Alignment:
Q  311 caactcaatcaacaactttgtatatcaaatttcattttgg-tgcttcacatgaccatctagcacaattttaccaatacaaacaacnnnnnnnnncttcat 409  Q
    ||||||| |||||||||||||||||||||||||| ||||| | |||||||||| |||||||||||| |  |||||||||||||||         ||||||    
T  12370350 caactcagtcaacaactttgtatatcaaatttcactttgggtccttcacatgaacatctagcacaactccaccaatacaaacaacca-------cttcat 12370258  T
Q  410 aaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacacaatat 509  Q
    ||||||||||  ||||| ||| ||||||||||||||   |||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  12370257 aaaatggaattcccatggtataattcaacaacaaca---tatctaattcaacaacacttcatttagacatgaactcaaccataattcaaccacacaatat 12370161  T
Q  510 ccaaatccaacaa-ttgagtaaaactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacc 608  Q
    |  ||||| |||| ||||| ||||||||||||||| | ||||||| ||||||||||| |||| ||||||| ||| ||| |||| ||||||||||||||||    
T  12370160 ctcaatcccacaatttgagcaaaactcataagtacccattttcaccaaaccaacaactacaacttatttctcaataac-aaatcatgaatcatgcatacc 12370062  T
Q  609 caagccatgaattagcatccataacatcacttaacaacaacaacatc 655  Q
     ||||||||||| |  || || ||||||||||| |||||||||||||    
T  12370061 taagccatgaataattatgcacaacatcacttagcaacaacaacatc 12370015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 6 - 252
Target Start/End: Original strand, 25123890 - 25124124
Alignment:
Q  6 gacatcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagc 105  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||  |||||||||||||  ||| |    
T  25123890 gacaacatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatccgttttcgacgccgttttcactcacatgctcctaactcttaac 25123989  T
Q  106 agtatcataatgcacagaaaaatcccagtttcaacaacctcaaattcattttacaagcctcacacaaacactcattttccaaaacggttaacaaatgaat 205  Q
    | |||||||||||||||||||||  |||||||||||||| | ||||| ||||           ||||||||||||||||||||| ||||||||| |||||    
T  25123990 actatcataatgcacagaaaaatttcagtttcaacaacc-ccaattcctttt-----------acaaacactcattttccaaaatggttaacaattgaat 25124077  T
Q  206 tttcaaacgaaactcccgttttctcccaaaacgactcgactatcata 252  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||    
T  25124078 tttcaaacgaaactctcgttttcttccaaaacgactcgactatcata 25124124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 370694 - 370790
Alignment:
Q  20 ttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataat 116  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| || ||| |||||||||    
T  370694 ttcaacttctacgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcgcctacatgctcctaacacttggcactatcataat 370790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 13757977 - 13758073
Alignment:
Q  20 ttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataat 116  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| || ||| |||||||||    
T  13757977 ttcaacttctacgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcgcctacatgctcctaacacttggcactatcataat 13758073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 6 - 140
Target Start/End: Original strand, 11054316 - 11054450
Alignment:
Q  6 gacatcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagc 105  Q
    |||| ||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||| |||||    
T  11054316 gacaacatcagattttcaaccttcacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctatatgttcctgacacttagc 11054415  T
Q  106 agtatcataatgcacagaaaaatcccagtttcaac 140  Q
      |||||||||  | |||||||| | |||||||||    
T  11054416 cctatcataatatatagaaaaattcaagtttcaac 11054450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 14251547 - 14251451
Alignment:
Q  20 ttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataat 116  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| || ||| ||| |||||    
T  14251547 ttcaacttctacgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcgcctacatgctcctaacacttggcactattataat 14251451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 6 - 137
Target Start/End: Complemental strand, 37784802 - 37784671
Alignment:
Q  6 gacatcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagc 105  Q
    |||| ||||||||||||||| |  || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||    
T  37784802 gacagcatcagattttcaaccttcacattttcgctcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgttcctgacacttagc 37784703  T
Q  106 agtatcataatgcacagaaaaatcccagtttc 137  Q
      |||||||||  |||||||||| | ||||||    
T  37784702 cctatcataatctacagaaaaattcaagtttc 37784671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 18980669 - 18980573
Alignment:
Q  20 ttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataat 116  Q
    |||||||||||||||||||||||| ||||||||||||||||||  |||||||||| |||||||||||||||||||||||| || ||| |||||||||    
T  18980669 ttcaacttctacgttttcgcgcattaaaatcaaaccgttaatccattttcgatgcagttttcacctacatgctcctaacacttggcactatcataat 18980573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 481 - 581
Target Start/End: Complemental strand, 13863279 - 13863178
Alignment:
Q  481 aattcaaccataattcaacaacacaatatccaaatccaacaa-ttgagtaaaactcataagtactccttttcactaaaccaacaacaacaatttatttca 579  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||| | ||||||  |||||||||||||||| ||||||||    
T  13863279 aattcaaccataattcaacaacacaatatcccaatccaacaatttgagcaaaactcataagtacccattttcatcaaaccaacaacaacaacttatttca 13863180  T
Q  580 ca 581  Q
    ||    
T  13863179 ca 13863178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 15927174 - 15927271
Alignment:
Q  20 ttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccg-ttttcacctacatgctcctaacaattagcagtatcataat 116  Q
    ||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||| | || ||| |||||||||    
T  15927174 ttcaacttctctgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgtttttcgcctacatgctcctaatacttggcactatcataat 15927271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 574 - 660
Target Start/End: Complemental strand, 16570261 - 16570176
Alignment:
Q  574 atttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    ||||| |||||||||| | |||||||||||||||||||||||||||||| ||||||  |||||||||| ||||||||||||| ||||    
T  16570261 atttctcaacaacaaa-tcatgaatcatgcatacccaagccatgaattatcatccacgacatcacttagcaacaacaacatcaattg 16570176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 574 - 660
Target Start/End: Original strand, 16595401 - 16595486
Alignment:
Q  574 atttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    ||||| |||||||||| | |||||||||||||||||||||||||||||| ||||||  |||||||||| ||||||||||||| ||||    
T  16595401 atttctcaacaacaaa-tcatgaatcatgcatacccaagccatgaattatcatccacgacatcacttagcaacaacaacatcaattg 16595486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 555 - 660
Target Start/End: Complemental strand, 12248395 - 12248291
Alignment:
Q  555 aaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacat 654  Q
    |||||| ||||||||  | ||||| |||||||||| | |||||||||||||||||||| |||| |||| |||||| ||||||||||| ||||||||||||    
T  12248395 aaaccaccaacaacatctcatttctcaacaacaaa-tcatgaatcatgcatacccaagtcatgcattatcatccacaacatcacttagcaacaacaacat 12248297  T
Q  655 ctattg 660  Q
    | ||||    
T  12248296 ccattg 12248291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 547 - 655
Target Start/End: Original strand, 11287382 - 11287489
Alignment:
Q  547 ttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaac 646  Q
    ||||||| |||||| ||||||||  | ||||| |||||||||| | |||||||||||| ||||||||||||||||| |||| | ||||| ||||| ||||    
T  11287382 ttttcaccaaaccaccaacaacatctcatttctcaacaacaaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacttagcaac 11287480  T
Q  647 aacaacatc 655  Q
    |||||||||    
T  11287481 aacaacatc 11287489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 13 - 116
Target Start/End: Complemental strand, 19486403 - 19486300
Alignment:
Q  13 tcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatca 112  Q
    ||||||||||||| |  |||||||||| |||||||| ||| ||||||| | |||||||||||||||||| |||||| |||||| ||| |||||  |||||    
T  19486403 tcagattttcaaccttcacgttttcgctcataaaaaccaatccgttaacccgttttcgatgccgttttcgcctacacgctcctgacacttagctctatca 19486304  T
Q  113 taat 116  Q
    ||||    
T  19486303 taat 19486300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 575 - 660
Target Start/End: Complemental strand, 49047928 - 49047844
Alignment:
Q  575 tttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||| |||||||||| | |||||||||||||||||||||||||||||| || | | ||||||||||| ||||||||||||| ||||    
T  49047928 tttctcaacaacaaa-tcatgaatcatgcatacccaagccatgaattatcagcaacaacatcacttagcaacaacaacatcaattg 49047844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 17467830 - 17467707
Alignment:
Q  6 gacatcatcagattttcaacttct-acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattag 104  Q
    |||| |||||||||||| | || | |||||||||||| |||||  ||||||||||| | |||||||||||||||||| |||||  |||||| ||| ||||    
T  17467830 gacaacatcagattttctaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgccgttttcgcctacgcgctcctgacacttag 17467731  T
Q  105 cagtatcataatgcacagaaaaat 128  Q
    |  |||||||||  ||||||||||    
T  17467730 ctctatcataatctacagaaaaat 17467707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 17585384 - 17585507
Alignment:
Q  6 gacatcatcagattttcaacttct-acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattag 104  Q
    |||| |||||||||||| | || | |||||||||||| |||||  ||||||||||| | |||||||||||||||||| |||||  |||||| ||| ||||    
T  17585384 gacaacatcagattttctaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgccgttttcgcctacgcgctcctgacacttag 17585483  T
Q  105 cagtatcataatgcacagaaaaat 128  Q
    |  |||||||||  ||||||||||    
T  17585484 ctctatcataatctacagaaaaat 17585507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 574 - 660
Target Start/End: Original strand, 13274779 - 13274864
Alignment:
Q  574 atttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    ||||| |||||||||||  |||||||||||||||| ||||||||||| | |||| | ||||||||||| ||||||||||||| ||||    
T  13274779 atttctcaacaacaaaac-atgaatcatgcataccaaagccatgaatcatcatcaacaacatcacttagcaacaacaacatcaattg 13274864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 404 - 485
Target Start/End: Original strand, 28722115 - 28722197
Alignment:
Q  404 cttcataaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaac-acttcatttagacatgaattc 485  Q
    ||||| ||||||||||| ||||| ||  | ||||||||||||||||||||| ||||||||| |||||||||| ||||||||||    
T  28722115 cttcacaaaatggaatacccatggtacaaatcaacaacaacaacatatctaattcaacaacaacttcatttaaacatgaattc 28722197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 30 - 140
Target Start/End: Original strand, 48274111 - 48274221
Alignment:
Q  30 acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataatgcacagaaaaatc 129  Q
    |||||||||||| |||||| |||||| |||| | |||||||||||||||||| |||||  |||||| |||  ||||  ||||| |||  ||||||||||     
T  48274111 acgttttcgcgcctaaaaaccaaaccattaacccgttttcgatgccgttttcgcctacgcgctcctgacacatagctctatcacaatctacagaaaaatt 48274210  T
Q  130 ccagtttcaac 140  Q
    |||||||||||    
T  48274211 ccagtttcaac 48274221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 10063301 - 10063244
Alignment:
Q  30 acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctac 87  Q
    |||||||||||| |||||||| ||||||||| | ||||||||||||||||||||||||    
T  10063301 acgttttcgcgcctaaaaatcgaaccgttaacccgttttcgatgccgttttcacctac 10063244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 93
Target Start/End: Original strand, 4280729 - 4280816
Alignment:
Q  6 gacatcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctc 93  Q
    |||| |||||||||||| || |  |||||||||||| |||||| | ||||||||| | |||||||||||||||||| |||||| ||||    
T  4280729 gacagcatcagattttcgaccttcacgttttcgcgcgtaaaaacccaaccgttaacccgttttcgatgccgttttcgcctacacgctc 4280816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 140
Target Start/End: Original strand, 13256297 - 13256432
Alignment:
Q  6 gacatcatcagattttcaacttct-acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattag 104  Q
    |||| |||||||||||| | || | |||||||||||| |||||   |||||||||| | ||||||||||  |||||| |||||| |||||| ||| ||||    
T  13256297 gacaacatcagattttctaattttcacgttttcgcgcgtaaaatctaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttag 13256396  T
Q  105 cagtatcataatgcacagaaaaatcccagtttcaac 140  Q
    |  |||||||||  |||||||||| | |||||||||    
T  13256397 ctctatcataatctacagaaaaattcaagtttcaac 13256432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 116
Target Start/End: Complemental strand, 21734866 - 21734756
Alignment:
Q  6 gacatcatcagattttcaac-ttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattag 104  Q
    |||| |||||||||||| || |||| ||||||| |||||||||| ||||||||||| | |||||||||||||||||| |||| | |||||| | | ||||    
T  21734866 gacagcatcagattttcgaccttct-cgttttcacgcataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctaaacgctcctgagacttag 21734768  T
Q  105 cagtatcataat 116  Q
    |  |||||||||    
T  21734767 ctctatcataat 21734756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 213 - 315
Target Start/End: Complemental strand, 12373045 - 12372948
Alignment:
Q  213 cgaaactcccgttttctcccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaaccacataggca 312  Q
    ||||||||||  ||| ||||||| ||||||||||| || ||| ||||||||    |||| |||||||||||||||||||||| ||||||| |||||| ||    
T  12373045 cgaaactcccaatttttcccaaa-cgactcgactaacacaactacgacata----aaaacagaaattccatcaagtttaacttatccaactacatagaca 12372951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 547 - 660
Target Start/End: Original strand, 13377494 - 13377606
Alignment:
Q  547 ttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaac 646  Q
    ||||||| |||||||||||||||| ||||||| || || |||| | |||| | ||| | ||||||||||||||| | |||| | ||||| ||||| ||||    
T  13377494 ttttcaccaaaccaacaacaacaacttatttctcatcatcaaa-tcatgatttatgaacacccaagccatgaatcatcatcaacaacattacttagcaac 13377592  T
Q  647 aacaacatctattg 660  Q
    ||||||||| ||||    
T  13377593 aacaacatcaattg 13377606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 555 - 660
Target Start/End: Complemental strand, 17224212 - 17224108
Alignment:
Q  555 aaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacat 654  Q
    |||||| ||||||||| | ||||| || ||||||| | |||||| ||| ||||||||||||||||| | |||  | ||||||||||| ||||||||||||    
T  17224212 aaaccaccaacaacaactcatttctcatcaacaaa-tcatgaattatgaatacccaagccatgaatcatcattaacaacatcacttagcaacaacaacat 17224114  T
Q  655 ctattg 660  Q
    | ||||    
T  17224113 caattg 17224108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 34 - 125
Target Start/End: Original strand, 28720332 - 28720423
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataatgcacagaaa 125  Q
    |||||||| ||||| |||||||||||||| | ||| |||||||||||| |||||| |||||| ||| || ||  |||||||||  |||||||    
T  28720332 tttcgcgcgtaaaattcaaaccgttaatcggattttgatgccgttttcgcctacacgctcctgacacttggctctatcataatctacagaaa 28720423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 37380485 - 37380608
Alignment:
Q  6 gacatcatcagattttcaacttct-acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattag 104  Q
    |||| |||||||||||| | || | |||||||||||| |||||  ||||||||||| | |||||| ||| ||||||| |||||  |||||| ||| ||||    
T  37380485 gacaacatcagattttctaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcaatgtcgttttcgcctacgcgctcctgacacttag 37380584  T
Q  105 cagtatcataatgcacagaaaaat 128  Q
    |  |||||||||  ||||||||||    
T  37380585 ctctatcataatctacagaaaaat 37380608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 555 - 660
Target Start/End: Complemental strand, 7284333 - 7284230
Alignment:
Q  555 aaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacat 654  Q
    |||||| ||||||||| | ||||| |||||||||  | |||||||||||| || ||||||||||||||  ||| | ||||| || || ||||||||||||    
T  7284333 aaaccaccaacaacaactcatttctcaacaacaa--tcatgaatcatgcaaactcaagccatgaattattatcaacaacatgacatatcaacaacaacat 7284236  T
Q  655 ctattg 660  Q
    | ||||    
T  7284235 caattg 7284230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 7822345 - 7822406
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcct 95  Q
    |||||||| |||||  ||||||||||||| | ||| ||||||||||||||||||||| ||||    
T  7822345 tttcgcgcgtaaaatgcaaaccgttaatcggattttgatgccgttttcacctacatgatcct 7822406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 7829656 - 7829717
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcct 95  Q
    |||||||| |||||  ||||||||||||| | ||| ||||||||||||||||||||| ||||    
T  7829656 tttcgcgcgtaaaatgcaaaccgttaatcggattttgatgccgttttcacctacatgatcct 7829717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 95
Target Start/End: Complemental strand, 27102276 - 27102215
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcct 95  Q
    |||||||| |||||  ||||||||||||| | ||| ||||||||||||||||||||| ||||    
T  27102276 tttcgcgcgtaaaatgcaaaccgttaatcggattttgatgccgttttcacctacatgatcct 27102215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 95
Target Start/End: Complemental strand, 27109624 - 27109563
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcct 95  Q
    |||||||| |||||  ||||||||||||| | ||| ||||||||||||||||||||| ||||    
T  27109624 tttcgcgcgtaaaatgcaaaccgttaatcggattttgatgccgttttcacctacatgatcct 27109563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 27176050 - 27176111
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcct 95  Q
    |||||||| |||||  ||||||||||||| | ||| ||||||||||||||||||||| ||||    
T  27176050 tttcgcgcgtaaaatgcaaaccgttaatcggattttgatgccgttttcacctacatgatcct 27176111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 95
Target Start/End: Complemental strand, 38784368 - 38784307
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcct 95  Q
    |||||||| |||||  ||||||||||||| | ||| ||||||||||||||||||||| ||||    
T  38784368 tttcgcgcgtaaaatgcaaaccgttaatcggattttgatgccgttttcacctacatgatcct 38784307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 547 - 655
Target Start/End: Complemental strand, 17947874 - 17947767
Alignment:
Q  547 ttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaac 646  Q
    ||||||| ||||||||||||||||||||||||||| | ||||  | |||| | ||| | |||||||| |||||| | || | | || ||| |||||||||    
T  17947874 ttttcacaaaaccaacaacaacaatttatttcacatc-acaatctcatgatttatgaacacccaagctatgaatcatcaacaacaatatctcttaacaac 17947776  T
Q  647 aacaacatc 655  Q
    |||||||||    
T  17947775 aacaacatc 17947767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 584 - 651
Target Start/End: Original strand, 143647 - 143713
Alignment:
Q  584 aacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaa 651  Q
    |||||||| |||||| ||||| ||||||||||||||||| |||  | ||||| |||||||||||||||    
T  143647 aacaaaatcatgaattatgca-acccaagccatgaattatcattaacaacatgacttaacaacaacaa 143713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 140
Target Start/End: Complemental strand, 3289205 - 3289070
Alignment:
Q  6 gacatcatcagattttc-aacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattag 104  Q
    |||| |||||||||||| |||||  || |||||||||||||||  ||||  ||||| |  ||||||||||||||||  |||||| | |||| ||| ||||    
T  3289205 gacagcatcagattttctaactttcacattttcgcgcataaaatccaaattgttaacccattttcgatgccgtttttgcctacacgttcctgacacttag 3289106  T
Q  105 cagtatcataatgcacagaaaaatcccagtttcaac 140  Q
    |  |||||||||  |||||||| | | |||||||||    
T  3289105 ctctatcataatctacagaaaatttcaagtttcaac 3289070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 593 - 660
Target Start/End: Complemental strand, 15822668 - 15822601
Alignment:
Q  593 atgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||||||||||| ||||||||||||||| | |||| | ||||| || || ||||||||||||| ||||    
T  15822668 atgaatcatgcaaacccaagccatgaatgatcatcaacaacatgacatatcaacaacaacatcaattg 15822601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 32494841 - 32494782
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctc 93  Q
    |||||||| ||||| |||||||||||||| | ||| |||||||||||| |||||| ||||    
T  32494841 tttcgcgcgtaaaattcaaaccgttaatcggattttgatgccgttttcgcctacacgctc 32494782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 42 - 116
Target Start/End: Complemental strand, 21734270 - 21734196
Alignment:
Q  42 ataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataat 116  Q
    ||||||| ||||||||||| | |||||||||||||||||| |||| | |||||| | | |||||  |||||||||    
T  21734270 ataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctaaacgctcctgagacttagctctatcataat 21734196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 595 - 653
Target Start/End: Complemental strand, 39046858 - 39046800
Alignment:
Q  595 gaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaaca 653  Q
    |||| ||||| ||||||||||||||||| |||| | ||||| ||| |||||||||||||    
T  39046858 gaattatgcaaacccaagccatgaattatcatcaacaacatgactaaacaacaacaaca 39046800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 617
Target Start/End: Complemental strand, 1937289 - 1937221
Alignment:
Q  548 tttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatg 617  Q
    |||||| |||||| |||||| |||  ||||| |||||| |||||||||||||||||| ||||||| ||||    
T  1937289 tttcacaaaaccaccaacaataatccatttctcaacaa-aaaattatgaatcatgcaaacccaagtcatg 1937221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 596 - 653
Target Start/End: Original strand, 12759000 - 12759057
Alignment:
Q  596 aatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaaca 653  Q
    |||| |||| ||||||||||||||||| || | | ||||| |||||||||||||||||    
T  12759000 aatcctgcaaacccaagccatgaattatcaccaacaacatgacttaacaacaacaaca 12759057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 99
Target Start/End: Original strand, 16383378 - 16383443
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaaca 99  Q
    |||||||||||||| ||||||| |||||| | ||| |||| ||||||| |||||| | ||||||||    
T  16383378 tttcgcgcataaaattcaaaccattaatcggattttgatgtcgttttcgcctacacgttcctaaca 16383443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 99
Target Start/End: Original strand, 29004704 - 29004769
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaaca 99  Q
    ||||||||  |||| |||||||||||||| | ||| | |||||||||| |||||| ||||||||||    
T  29004704 tttcgcgcgaaaaattcaaaccgttaatcggattttggtgccgttttcgcctacacgctcctaaca 29004769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 584 - 653
Target Start/End: Original strand, 44865229 - 44865297
Alignment:
Q  584 aacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaaca 653  Q
    |||||||| |||||| ||||| ||||||||||||||||| |||  |  |||| |||||||||||||||||    
T  44865229 aacaaaatcatgaattatgca-acccaagccatgaattatcataaactacatgacttaacaacaacaaca 44865297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 588 - 652
Target Start/End: Complemental strand, 45452408 - 45452344
Alignment:
Q  588 aaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaac 652  Q
    |||| |||||||||||  ||||||||||||||||| |||| | ||||| || || ||||||||||    
T  45452408 aaatcatgaatcatgccaacccaagccatgaattatcatcaacaacatgacatatcaacaacaac 45452344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 422; Significance: 0; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 422; E-Value: 0
Query Start/End: Original strand, 12 - 660
Target Start/End: Original strand, 14392 - 15026
Alignment:
Q  12 atcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatc 111  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||     | |||||| ||||    
T  14392 atcaaattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatccgttttctatgccgttttcacctacatgctc-----acttagcactatc 14486  T
Q  112 ataatgcacagaaaaatcccagtttcaacaacctcaaattcattttacaagcctcacacaaacactcattttccaaaacggttaacaaatgaattttcaa 211  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  14487 ataatgcccagaaaaatcccagtttcaacaacctcaaattcattttacaaacctcgcacaaacactcattttccaaaacggttaacaaatgaattttcaa 14586  T
Q  212 acgaaactcccgttttctcccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaaccacataggc 311  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||     ||||||||| |||||||||||||||||||||||||||||||||||||      
T  14587 acgaaactcccgttttctcccaaaatgactcgactatcataaccac----aacataaaaacagaaattccatcaagtttaactcatccaaccacatagaa 14682  T
Q  312 aactcaatcaacaactttgtatatcaaatttca-ttttggtgcttcacatgaccatctagcacaattttaccaatacaaacaacnnnnnnnnncttcata 410  Q
    |||||| |||||||||||||||||||||||||| ||| ||| |||||||||| |||||||||||| || || ||||||||||||          ||||||    
T  14683 aactcagtcaacaactttgtatatcaaatttcactttgggttcttcacatgaacatctagcacaacttcactaatacaaacaacttat------ttcata 14776  T
Q  411 aaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacacaatatc 510  Q
    |||||||||    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||    
T  14777 aaatggaatgcttatgatatcattcaacaacaacagcatatctacttcaacaacacttcatttagacataaattcaaccataattcgacaacacaatatc 14876  T
Q  511 caaatccaacaattgagtaaaactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcataccca 610  Q
      ||||||| ||||||| ||||| ||||||||  | ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  14877 tgaatccaataattgagaaaaacacataagtatccattttcaccaaaccaacaacaacaacttatttcacaacaacaaaattatgaatcatgcataccca 14976  T
Q  611 agccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14977 agccatgaattagcatccataacatcacttaacaacaacaacatctattg 15026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 16 - 140
Target Start/End: Original strand, 18463 - 18587
Alignment:
Q  16 gattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataa 115  Q
    |||||||||| |  |||||||||| |||||||||||||||||||| |  ||||||||||||||||| |||| |  ||||| ||| || ||  ||||||||    
T  18463 gattttcaaccttcacgttttcgcacataaaaatcaaaccgttaacccattttcgatgccgttttcgcctaaacactcctgacacttggctctatcataa 18562  T
Q  116 tgcacagaaaaatcccagtttcaac 140  Q
    |  |||||||||| | |||||||||    
T  18563 tctacagaaaaattcaagtttcaac 18587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 403; Significance: 0; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 403; E-Value: 0
Query Start/End: Original strand, 6 - 660
Target Start/End: Complemental strand, 15273123 - 15272490
Alignment:
Q  6 gacatcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagc 105  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||            ||||||||||||||||| |||||    
T  15273123 gacaacatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatccgttttcg------------cctacatgctcctaacacttagc 15273036  T
Q  106 agtatcataatgcacagaaaaatcccagtttcaacaacctcaaattcattttacaagcctcacacaaacactcattttccaaaacggttaacaaatgaat 205  Q
    |  |||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  15273035 acgatcataatgcacagaaaaatcccagttttaacaacctcaaattcattttacaaacctcacacaaacactcattttccaaaacggttaacaattgaat 15272936  T
Q  206 tttcaaacgaaactcccgttttctcccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaaccac 305  Q
    |||||||||||||||||||||||| |||||| |||||||||| | ||||||      ||||||||| ||||||||||||||||||||||||||||| |||    
T  15272935 tttcaaacgaaactcccgttttcttccaaaatgactcgactaacgtaacca----taacataaaaacagaaattccatcaagtttaactcatccaatcac 15272840  T
Q  306 ataggcaactcaatcaacaactttgtatatcaaatttca-ttttggtgcttcacatgaccatctagcacaattttaccaatacaaacaacnnnnnnnnnc 404  Q
    |||| ||||||| |||||||||||||||||||||||||| ||| ||| |||||| ||| ||||||||||||||| |||||||||||||||              
T  15272839 atagacaactcagtcaacaactttgtatatcaaatttcactttgggttcttcacttgaacatctagcacaatttcaccaatacaaacaacttat------ 15272746  T
Q  405 ttcataaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacac 504  Q
    ||||||||||||||||  |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15272745 ttcataaaatggaatactcatgatatcattcaaggacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacac 15272646  T
Q  505 aatatccaaatccaacaattgagtaaaactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgca 604  Q
    ||||||| ||||||||||||||| ||||| ||||| ||  | ||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  15272645 aatatcccaatccaacaattgagcaaaacacataattatccattttcaccaaactaacaacaacaacttatttcacaacaacaaaattatgaatcatgca 15272546  T
Q  605 tacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  15272545 tacccaagccatgaattagcattcataacatcacttaacaacaacaacatctattg 15272490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 302; E-Value: 1e-169
Query Start/End: Original strand, 14 - 660
Target Start/End: Complemental strand, 30233323 - 30232666
Alignment:
Q  14 cagattttcaa-cttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatca 112  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || | ||| |||||  ||||     
T  30233323 cagattttcaatcttc-acgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcacctacatgttcttgacacttagccctatct 30233225  T
Q  113 taatgcacagaaaaatcccagtttcaacaacctcaaattcattttac-aagcctcacacaaacactca-ttttccaaaacggttaacaaatgaattttca 210  Q
    ||||| |||||||||| | || |||||||||| |||||||||||| | |||||| ||||||||||||| |||||||||||||||||||| ||||||||||    
T  30233224 taatgtacagaaaaattcaag-ttcaacaaccccaaattcattttccaaagccttacacaaacactcatttttccaaaacggttaacaattgaattttca 30233126  T
Q  211 aacgaaactcccgttttctcccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaaccacatagg 310  Q
       |||||||||| |||||||| ||||||||||||||||| ||| ||     ||||||||| ||||||||||||||||||||||||||||||||||| |     
T  30233125 cctgaaactcccgatttctccc-aaacgactcgactatcacaactac----aacataaaaacagaaattccatcaagtttaactcatccaaccacatcga 30233031  T
Q  311 caactcaatcaacaactttgtatatcaaatttcatttt-ggtgcttcacatgaccatctagcacaattttaccaatacaaacaacnnnnnnnnncttcat 409  Q
    |||||||  ||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||| || |||||||||||||||         ||||||    
T  30233030 caactcagacaacaactttgtatatcaaatttcattttgggtccttcacatgaacatctagcacaacttcaccaatacaaacaac-------aacttcat 30232938  T
Q  410 aaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacacaatat 509  Q
    |||||| |||| ||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  30232937 aaaatgaaatacccatggtatgattcaacaacaacaacatatctaattcaacaacacttcatttagacatgaattcaaccataattcaacaacataatat 30232838  T
Q  510 ccaaatccaacaa-ttgagtaaaactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaaca--------------------a 588  Q
    |  |||||||||| ||||| ||||||||||||||| | ||||||| ||| |||||||||||| ||||||||||||||||                    |    
T  30232837 ctcaatccaacaatttgagcaaaactcataagtacccattttcaccaaaacaacaacaacaacttatttcacaacaacaacaacttatttcacaacaaca 30232738  T
Q  589 aattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  30232737 aattatgaataatgcatacccaagccatgaattaacatccataacatcacttaacaacaacaacatccattg 30232666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 135 - 660
Target Start/End: Complemental strand, 12837883 - 12837370
Alignment:
Q  135 ttcaacaacctcaaattcattttacaa-gcctcacacaaacactcatttt-ccaaaacggttaacaaatgaattttcaaacgaaactcccgttttctccc 232  Q
    |||||||||| |||||||||||| ||| |||| | ||||||||||||||| |||||||||||||||| ||||||||||  ||||||||||| ||||||||    
T  12837883 ttcaacaaccccaaattcattttccaaagccttatacaaacactcatttttccaaaacggttaacaattgaattttcacccgaaactcccgatttctccc 12837784  T
Q  233 aaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaaccacataggcaactcaatcaacaactttgta 332  Q
    ||| |||||||||||||| ||| || |||||    |||| ||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  12837783 aaa-cgactcgactatcacaactacaacata----aaaacagaaatttcatcaagtttaactcatccaaccacatagacaactcaattaacaactttgta 12837689  T
Q  333 tatcaaatttcattttgg-tgcttcacatgaccatctagcacaattttaccaatacaaacaacnnnnnnnnncttcataaaatggaatatccatgatatc 431  Q
    |||||||||||| ||||| | |||| ||||| |||||||||||| || ||||||||| |||||          |||||||||||| ||  ||||||||||    
T  12837688 tatcaaatttcactttgggtccttcgcatgaacatctagcacaacttcaccaatacagacaacttat------ttcataaaatgggatgcccatgatatc 12837595  T
Q  432 attcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacacaatatccaaatccaacaa-ttgagtaa 530  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||    
T  12837594 attcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacacaatatcccaatccaacaatttgagcaa 12837495  T
Q  531 aactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccat 630  Q
    ||||||||||||| | ||||||| ||||||||||||||   ||||||| | ||||| |||| |||||||||||||||||||||||||||||| |||||||    
T  12837494 aactcataagtacccattttcaccaaaccaacaacaac---ttatttctc-acaac-aaatcatgaatcatgcatacccaagccatgaattaacatccat 12837400  T
Q  631 aacatcacttaacaacaacaacatctattg 660  Q
    ||||||||||||||||||||||||| ||||    
T  12837399 aacatcacttaacaacaacaacatccattg 12837370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 6 - 660
Target Start/End: Complemental strand, 52266343 - 52265678
Alignment:
Q  6 gacatcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagc 105  Q
    |||| ||| ||||||||||| |  ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| || | ||| |||||    
T  52266343 gacagcataagattttcaaccttcacgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgtcgttttcacctacatgttcatgacacttagc 52266244  T
Q  106 agtatcataatgcacagaaaaatcccagtttcaacaacctcaaattcattttacaa-gcctcacacaaacactcatttt-ccaaaacggttaacaaatga 203  Q
      |||| ||||| |||||||| ||  ||||||||||||| |||||||||||| ||| |||| ||||||||||||||||| |||||||||||||||| |||    
T  52266243 cctatcttaatgtacagaaaattca-agtttcaacaaccccaaattcattttccaaagccttacacaaacactcatttttccaaaacggttaacaattga 52266145  T
Q  204 attttcaaacgaaactcccgttttctcccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaacc 303  Q
    |||||||  ||||||||||| ||||||||||| |||||||||||||| ||| || |||||    |||| |||||||||||||||||||||||||||||||    
T  52266144 attttcacccgaaactcccgatttctcccaaa-cgactcgactatcacaactacaacata----aaaacagaaattccatcaagtttaactcatccaacc 52266050  T
Q  304 acataggcaactcaatcaacaactttgtatatcaaatttcattttgg-tgcttcacatgaccatctagcacaattttaccaatacaaacaa--------- 393  Q
    |||| | ||||||| |||||||||||||||||||||||||||||||| | |||||||||| |||||||||||| || |||||||||| |||             
T  52266049 acatcgacaactcagtcaacaactttgtatatcaaatttcattttgggtccttcacatgaacatctagcacaacttcaccaatacaagcaacaacctcac 52265950  T
Q  394 -----cnnnnnnnnncttcataaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaac 488  Q
         |         ||||||||||||||||| ||||| ||| ||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  52265949 caattcaaacaacaacttcataaaatggaatacccatggtataatttaacaacaacaacatatctaattcaacaacacttcattttgacatgaattcaac 52265850  T
Q  489 cataattcaacaacacaatatccaaatccaacaa-ttgagtaaaactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaaca 587  Q
    ||||||||||||||||||||||  |||  ||||| ||||| ||||||||||||||| | ||||||| |||||||||||| ||| |||||||||| || |     
T  52265849 cataattcaacaacacaatatctcaatttaacaatttgagcaaaactcataagtacccattttcaccaaaccaacaacatcaacttatttcacatcatc- 52265751  T
Q  588 aaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||| |||||| ||| | ||||||||||||||| | || |   || |||||||| ||||||||||||| ||||    
T  52265750 aaatcatgaattatgaacacccaagccatgaatcatcaacatcaatatcacttagcaacaacaacatcaattg 52265678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 6 - 581
Target Start/End: Complemental strand, 15852178 - 15851604
Alignment:
Q  6 gacatcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagc 105  Q
    |||| ||||||||||||||| |  || |||| ||||||||||||||||  ||||||| ||||||||||||||||||||||||||| || | ||| |||||    
T  15852178 gacagcatcagattttcaaccttcacatttttgcgcataaaaatcaaattgttaatccgttttcgatgccgttttcacctacatgttcatgacacttagc 15852079  T
Q  106 agtatcataatgcacagaaaaatcccagtttcaacaacctcaaattcattttac-aagcctcacacaaacactcattttccaaaacggttaacaaatgaa 204  Q
      |||| ||||| ||| |||||  | ||||||||||||| ||||| |||||| | |||||| ||||||||||||||||||||||| ||||||||| ||||    
T  15852078 cctatcttaatgtacataaaaaatcaagtttcaacaaccccaaatccattttccaaagccttacacaaacactcattttccaaaatggttaacaattgaa 15851979  T
Q  205 ttttcaaacgaaactcccgttttctcccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaacca 304  Q
    ||||||   |||||||||||||||| || ||||||||||||||||| ||||||     ||||||||| |||||||  | ||||||||||||||||||| |    
T  15851978 ttttcacctgaaactcccgttttcttcc-aaacgactcgactatcacaaccac----aacataaaaaaagaaattataccaagtttaactcatccaacaa 15851884  T
Q  305 cataggcaactcaatcaacaactttgtatatc-aaatttcatttt--ggtgcttcacatgaccatc-tagcacaattttaccaatacaaacaacnnnnnn 400  Q
    ||| | ||||||| |||| ||||||||||||| ||| ||||||||  ||| |||||||||| |||| |||||||| || |||||| ||||||||          
T  15851883 catcgacaactcagtcaaaaactttgtatatcaaaagttcatttttgggtccttcacatgaacatcttagcacaacttcaccaattcaaacaac------ 15851790  T
Q  401 nnncttcataaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaac----aacacttcatttagacatgaattcaaccataattc 496  Q
       ||||| ||||||||||| ||||| ||| ||||||||||||||||||||||| ||||||    || |||||||||| |||||||||||||||||||||    
T  15851789 -aacttcacaaaatggaataaccatggtataattcaacaacaacaacatatctaattcaacaattaatacttcatttaaacatgaattcaaccataattc 15851691  T
Q  497 aacaacacaatatccaaatccaacaa-ttgagtaaaactcataa-gtactccttttcactaaaccaacaacaacaatttatttcaca 581  Q
    ||||||||||||||  ||| || ||| ||||| |||||||| || |||| | ||||||| |||||||||||||||| ||||||||||    
T  15851690 aacaacacaatatcataattcatcaatttgagcaaaactcacaaggtacccattttcacaaaaccaacaacaacaacttatttcaca 15851604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 26921907 - 26921763
Alignment:
Q  11 catcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtat 110  Q
    ||||||||||||||| |  | |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| ||| |||||| |||    
T  26921907 catcagattttcaacctacatgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgtcgttttcacctacatgttcctgacacttagcactat 26921808  T
Q  111 cataatgcacagaaaaatcccagtttcaacaacctcaaattcatt 155  Q
    |||| || |||||||||| | ||||||||||||| ||||||||||    
T  26921807 catattgtacagaaaaattcaagtttcaacaaccacaaattcatt 26921763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 20000330 - 20000426
Alignment:
Q  20 ttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataat 116  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| || ||| |||||||||    
T  20000330 ttcaacttctacgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcgcctacatgctcctaacacttggcactatcataat 20000426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 7132714 - 7132618
Alignment:
Q  20 ttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataat 116  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||| || ||| |||||||||    
T  7132714 ttcaacttctacgttttcgcgcataaaaatcaaaccgttaatccgttttcgataccgttttcgcctacatgctcctaacacttggcactatcataat 7132618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 30 - 140
Target Start/End: Complemental strand, 4830579 - 4830469
Alignment:
Q  30 acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataatgcacagaaaaatc 129  Q
    ||||||||||||||||||  ||||||||||| | |||||||||||||||||| |||||| |||||| ||| |||||  |||||||||  ||||||||||     
T  4830579 acgttttcgcgcataaaatccaaaccgttaacccgttttcgatgccgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaatt 4830480  T
Q  130 ccagtttcaac 140  Q
    | |||||||||    
T  4830479 caagtttcaac 4830469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 30 - 140
Target Start/End: Complemental strand, 4833874 - 4833764
Alignment:
Q  30 acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataatgcacagaaaaatc 129  Q
    ||||||||||||||||||  ||||||||||| | |||||||||||||||||| |||||| |||||| ||| |||||  |||||||||  ||||||||||     
T  4833874 acgttttcgcgcataaaatccaaaccgttaacccgttttcgatgccgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaatt 4833775  T
Q  130 ccagtttcaac 140  Q
    | |||||||||    
T  4833774 caagtttcaac 4833764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 6 - 140
Target Start/End: Original strand, 14280854 - 14280988
Alignment:
Q  6 gacatcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagc 105  Q
    |||| ||||||||||||| | |  |||||||||||| |||||||||||||||||| | |||||||||||||||||| |||||  |||||| |||  ||||    
T  14280854 gacagcatcagattttcacccttcacgttttcgcgcctaaaaatcaaaccgttaacccgttttcgatgccgttttcgcctacgcgctcctgacacatagc 14280953  T
Q  106 agtatcataatgcacagaaaaatcccagtttcaac 140  Q
      ||||| |||  ||||||||||  ||||||||||    
T  14280954 tctatcacaatctacagaaaaatttcagtttcaac 14280988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 547 - 650
Target Start/End: Complemental strand, 18494610 - 18494508
Alignment:
Q  547 ttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaac 646  Q
    ||||||| |||||| ||||||||  | ||||| |||||||||  | |||||||||||||||||||||||||| ||| |||| | ||||||||||||||||    
T  18494610 ttttcaccaaaccaccaacaacatctcatttctcaacaacaag-tcatgaatcatgcatacccaagccatgagttaccatcaacaacatcacttaacaac 18494512  T
Q  647 aaca 650  Q
    ||||    
T  18494511 aaca 18494508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 11 - 145
Target Start/End: Complemental strand, 4615492 - 4615358
Alignment:
Q  11 catcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtat 110  Q
    |||||||||| |||| |  ||||||||||||||||||| |||||||||||   || ||||||||||||||| |||||| || ||| ||| |||||  |||    
T  4615492 catcagatttccaaccttcacgttttcgcgcataaaaaccaaaccgttaactcgtcttcgatgccgttttcgcctacacgcacctgacacttagctctat 4615393  T
Q  111 cataatgcacagaaaaatcccagtttcaacaacct 145  Q
    ||||||  ||||||||||   ||||||||| ||||    
T  4615392 cataatctacagaaaaattgaagtttcaaccacct 4615358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 30 - 140
Target Start/End: Complemental strand, 54798328 - 54798218
Alignment:
Q  30 acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataatgcacagaaaaatc 129  Q
    |||||||||||| |||||| ||||||||||| | |||||||||||||||||| |||||  |||||| |||  ||||  ||||| |||  ||||||||||     
T  54798328 acgttttcgcgcctaaaaaacaaaccgttaacccgttttcgatgccgttttcgcctacgcgctcctgacacatagctctatcacaatctacagaaaaatt 54798229  T
Q  130 ccagtttcaac 140  Q
    |||||||||||    
T  54798228 ccagtttcaac 54798218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 13 - 86
Target Start/End: Complemental strand, 20899185 - 20899112
Alignment:
Q  13 tcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcaccta 86  Q
    ||||||||||||| |  |||||||||| |||||||||||||||||||| | |||||||||||||||||| ||||    
T  20899185 tcagattttcaaccttcacgttttcgcacataaaaatcaaaccgttaacccgttttcgatgccgttttcgccta 20899112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 548 - 617
Target Start/End: Complemental strand, 25119497 - 25119428
Alignment:
Q  548 tttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatg 617  Q
    |||||| |||||| ||||||||||  ||||| ||||||||||||||||||||||||| ||||||||||||    
T  25119497 tttcacaaaaccaccaacaacaatccatttctcaacaacaaaattatgaatcatgcaaacccaagccatg 25119428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 13 - 140
Target Start/End: Original strand, 27028362 - 27028486
Alignment:
Q  13 tcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatca 112  Q
    ||||||||||||| |  |||||||||| ||||||||||||||||   | | |||||||||||||||||| |||| | |||||| ||| |||||  |||||    
T  27028362 tcagattttcaaccttcacgttttcgcacataaaaatcaaaccg---acccgttttcgatgccgttttcgcctaaacgctcctgacacttagctctatca 27028458  T
Q  113 taatgcacagaaaaatcccagtttcaac 140  Q
    ||||  |||||||||| | |||||||||    
T  27028459 taatctacagaaaaattcaagtttcaac 27028486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 596 - 660
Target Start/End: Original strand, 27960984 - 27961048
Alignment:
Q  596 aatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||||||||||||||| |||||||||| |||| | ||||||||||||||||||||||||| ||||    
T  27960984 aatcatgcatacccaaaccatgaattatcatcaacaacatcacttaacaacaacaacatcaattg 27961048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 548 - 660
Target Start/End: Original strand, 34395223 - 34395334
Alignment:
Q  548 tttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaaca 647  Q
    |||||| |||||| ||||||||||  ||||| |||||||||| | |||||||||||| || |||||||||||||| |||| | ||||| || || |||||    
T  34395223 tttcacaaaaccaccaacaacaatccatttctcaacaacaaa-tcatgaatcatgcaaactcaagccatgaattatcatcaacaacatgacatagcaaca 34395321  T
Q  648 acaacatctattg 660  Q
    |||||||| ||||    
T  34395322 acaacatcaattg 34395334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 140
Target Start/End: Complemental strand, 2584591 - 2584456
Alignment:
Q  6 gacatcatcagattttcaacttct-acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattag 104  Q
    |||| |||||||||||| | || | |||||||||||| |||||  ||||||||||| |  ||| ||||||||||||| |||||| |||||| ||| ||||    
T  2584591 gacaacatcagattttctaattttcacgttttcgcgcgtaaaatccaaaccgttaacccatttacgatgccgttttcgcctacacgctcctgacacttag 2584492  T
Q  105 cagtatcataatgcacagaaaaatcccagtttcaac 140  Q
    |  |||||||||  |||||||||| | |||||||||    
T  2584491 ctctatcataatctacagaaaaattcaagtttcaac 2584456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 116
Target Start/End: Original strand, 15373944 - 15374047
Alignment:
Q  13 tcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatca 112  Q
    ||||||||||||| |  |||||||||  |||||||||||||  ||||| | ||||||||||||||||||||||||| | |||| ||| |||||  |||||    
T  15373944 tcagattttcaaccttcacgttttcggacataaaaatcaaatggttaacccgttttcgatgccgttttcacctacacgttcctgacacttagccttatca 15374043  T
Q  113 taat 116  Q
    ||||    
T  15374044 taat 15374047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 16157425 - 16157488
Alignment:
Q  30 acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctc 93  Q
    ||||||||||||||||||| ||||||||||| | |||||||||||||||||| |||||| ||||    
T  16157425 acgttttcgcgcataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctacacgctc 16157488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 116
Target Start/End: Original strand, 22354291 - 22354394
Alignment:
Q  13 tcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatca 112  Q
    ||||||||||||| |  |||||||||| | |||||| ||||||||||| | |||||||||||||||||| |||| | |||||| ||| |||||  |||||    
T  22354291 tcagattttcaaccttcacgttttcgctcttaaaaaccaaaccgttaacccgttttcgatgccgttttcgcctaaacgctcctgacacttagccctatca 22354390  T
Q  113 taat 116  Q
    ||||    
T  22354391 taat 22354394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 593 - 660
Target Start/End: Complemental strand, 23270171 - 23270104
Alignment:
Q  593 atgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||||||||||| ||||||||||||||||| |||| | ||||| ||||||||||||||||||| ||||    
T  23270171 atgaatcatgcaaacccaagccatgaattatcatcaacaacatgacttaacaacaacaacatcaattg 23270104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 584 - 653
Target Start/End: Complemental strand, 820158 - 820090
Alignment:
Q  584 aacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaaca 653  Q
    |||||||| |||||||||||| ||||||||||||||||| |||| | ||||| |||||||||||||||||    
T  820158 aacaaaatcatgaatcatgca-acccaagccatgaattatcatcaacaacatgacttaacaacaacaaca 820090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 547 - 660
Target Start/End: Original strand, 15044793 - 15044905
Alignment:
Q  547 ttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaac 646  Q
    ||||||| ||| |||||||||||||||||||| || || |||| | |||| | ||| | ||||||||||||||| | |||| | ||||||||||| ||||    
T  15044793 ttttcaccaaagcaacaacaacaatttatttctcatcatcaaa-tcatgatttatgaacacccaagccatgaatcatcatcaacaacatcacttagcaac 15044891  T
Q  647 aacaacatctattg 660  Q
    ||||||||| ||||    
T  15044892 aacaacatcaattg 15044905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 548 - 660
Target Start/End: Original strand, 16732135 - 16732246
Alignment:
Q  548 tttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaaca 647  Q
    |||||| ||| || ||||||||  | ||||| |||||||||| | |||||||||||| ||||||||||||||||| |||| | ||||| ||||| |||||    
T  16732135 tttcaccaaaacaccaacaacatctcatttctcaacaacaaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacttagcaaca 16732233  T
Q  648 acaacatctattg 660  Q
    || ||||| ||||    
T  16732234 acgacatcaattg 16732246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 548 - 660
Target Start/End: Complemental strand, 21959744 - 21959633
Alignment:
Q  548 tttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaaca 647  Q
    ||||||| || || |||||||| || ||||| |||| ||||| | ||||||||||||  |||||||||||||||| |||| | ||||| ||| |||||||    
T  21959744 tttcactcaaacaccaacaacatttaatttctcaaccacaaact-atgaatcatgcaagcccaagccatgaattatcatcaacaacatgactaaacaaca 21959646  T
Q  648 acaacatctattg 660  Q
    |||||||| ||||    
T  21959645 acaacatcaattg 21959633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 34 - 125
Target Start/End: Complemental strand, 5683164 - 5683073
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataatgcacagaaa 125  Q
    |||||||||||||| |||||||||||||| | ||| || ||||||||| |||||| |||||| ||| |||||  |||||||||  |||||||    
T  5683164 tttcgcgcataaaattcaaaccgttaatcggattttgacgccgttttcgcctacacgctcctgacacttagctctatcataatctacagaaa 5683073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 593 - 660
Target Start/End: Complemental strand, 13809747 - 13809680
Alignment:
Q  593 atgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||||||||||||| ||||||||||||||| |||| | ||||||| ||| ||||||||||||| ||||    
T  13809747 atgaatcatgcatatccaagccatgaattatcatcaacaacatcaattagcaacaacaacatcaattg 13809680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 404 - 486
Target Start/End: Complemental strand, 15213866 - 15213783
Alignment:
Q  404 cttcataaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaac-acttcatttagacatgaattca 486  Q
    ||||| ||||||||||| | ||| ||| | ||||||||||||||||||||| ||||||||| |||||||||| | |||||||||    
T  15213866 cttcacaaaatggaatacctatggtataaatcaacaacaacaacatatctaattcaacaacaacttcatttaaatatgaattca 15213783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 41 - 116
Target Start/End: Original strand, 15368171 - 15368246
Alignment:
Q  41 cataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataat 116  Q
    |||||||||||||||||||| | |||||||||| ||||||| |||||| |||||| ||| |||||  |||||||||    
T  15368171 cataaaaatcaaaccgttaacccgttttcgatgtcgttttcgcctacacgctcctgacacttagccctatcataat 15368246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 116
Target Start/End: Original strand, 16223992 - 16224095
Alignment:
Q  13 tcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatca 112  Q
    |||||||||||||    |||||||||  |||||||||||||||||||| | |||||||||| |||||||  ||||| |||||| ||| |||||  |||||    
T  16223992 tcagattttcaaccatcacgttttcggacataaaaatcaaaccgttaacccgttttcgatgtcgttttcgtctacacgctcctgacacttagccctatca 16224091  T
Q  113 taat 116  Q
    ||||    
T  16224092 taat 16224095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 574 - 653
Target Start/End: Complemental strand, 55376852 - 55376774
Alignment:
Q  574 atttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaaca 653  Q
    ||||| |||||||||| | |||||||||||| ||||||||||||||||| |||| | ||||| | |||||||||||||||    
T  55376852 atttctcaacaacaaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacataatttaacaacaacaaca 55376774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 140
Target Start/End: Original strand, 6512273 - 6512363
Alignment:
Q  50 caaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataatgcacagaaaaatcccagtttcaac 140  Q
    ||||||||||| | |||||||||||||||||| |||| |||||||| | | |||||  |||||||||  |||||||||| | |||||||||    
T  6512273 caaaccgttaacccgttttcgatgccgttttcgcctatatgctcctgaaacttagctctatcataatctacagaaaaattcaagtttcaac 6512363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 140
Target Start/End: Complemental strand, 14931569 - 14931435
Alignment:
Q  6 gacatcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagc 105  Q
    |||| |||||||||| |||| |  |||||||| ||| |||||| ||||||||||| | ||||| |||||||||||| |||||  |||||| ||| || ||    
T  14931569 gacaacatcagatttccaaccttcacgttttcacgcgtaaaaaccaaaccgttaacccgtttttgatgccgttttcgcctacccgctcctgacacttggc 14931470  T
Q  106 agtatcataatgcacagaaaaatcccagtttcaac 140  Q
      |||||||||  | |||||||| | |||||||||    
T  14931469 tctatcataatctatagaaaaattcaagtttcaac 14931435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 547 - 660
Target Start/End: Complemental strand, 15109631 - 15109519
Alignment:
Q  547 ttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaac 646  Q
    ||||||| ||| |||||||||||||||||||| || || |||| | |||| | ||| | ||||||||||||||| | |||| | ||||| ||||| ||||    
T  15109631 ttttcaccaaagcaacaacaacaatttatttctcatcatcaaa-tcatgatttatgaacacccaagccatgaatcatcatcaacaacattacttagcaac 15109533  T
Q  647 aacaacatctattg 660  Q
    ||||||||| ||||    
T  15109532 aacaacatcaattg 15109519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 6 - 140
Target Start/End: Original strand, 13447135 - 13447270
Alignment:
Q  6 gacatcatcagattttcaacttct-acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattag 104  Q
    |||| |||||||||||| | || | |||||||||||| |||||  ||||| ||||| |  |||| |||||||||||| |||||| |||||| ||| |||     
T  13447135 gacaacatcagattttctaattttcacgttttcgcgcgtaaaatccaaactgttaacccatttttgatgccgttttcgcctacacgctcctgacacttat 13447234  T
Q  105 cagtatcataatgcacagaaaaatcccagtttcaac 140  Q
    |  |||||||||  |||||||||| | |||||||||    
T  13447235 ctctatcataatctacagaaaaattcaagtttcaac 13447270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 116
Target Start/End: Complemental strand, 15214226 - 15214144
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataat 116  Q
    |||||||| ||||| |||||||||||||| | ||| |||||||||||| |||||| |||||| ||| || ||  |||||||||    
T  15214226 tttcgcgcgtaaaattcaaaccgttaatcggattttgatgccgttttcgcctacacgctcctgacacttggctctatcataat 15214144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 71
Target Start/End: Complemental strand, 8574381 - 8574316
Alignment:
Q  6 gacatcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcga 71  Q
    |||| ||||||||||||| | |  |||||||||||| |||||||||||||||||| | ||||||||    
T  8574381 gacagcatcagattttcacccttcacgttttcgcgcctaaaaatcaaaccgttaacccgttttcga 8574316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 95
Target Start/End: Complemental strand, 18293497 - 18293436
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcct 95  Q
    |||||||| ||||| |||||||||||||| | ||| |||||||||||| |||||| ||||||    
T  18293497 tttcgcgcgtaaaattcaaaccgttaatcggattttgatgccgttttcgcctacacgctcct 18293436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 584 - 653
Target Start/End: Original strand, 30457905 - 30457973
Alignment:
Q  584 aacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaaca 653  Q
    |||||||| |||||| ||||| ||||||||||||||||| |||| |  |||| |||||||||||||||||    
T  30457905 aacaaaataatgaattatgca-acccaagccatgaattatcatcaaccacatgacttaacaacaacaaca 30457973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 548 - 660
Target Start/End: Original strand, 44055881 - 44055992
Alignment:
Q  548 tttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaaca 647  Q
    |||||| ||| || ||||||||  | ||||| ||||||||||   |||||||||||| ||||||||||||||||| |||| | |||||  || ||| |||    
T  44055881 tttcaccaaaacaccaacaacatctcatttctcaacaacaaacc-atgaatcatgcaaacccaagccatgaattatcatcaacaacatggctaaaccaca 44055979  T
Q  648 acaacatctattg 660  Q
    |||||||| ||||    
T  44055980 acaacatcaattg 44055992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 116
Target Start/End: Original strand, 15403184 - 15403258
Alignment:
Q  41 cataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataat 116  Q
    |||||||||||||||||| | | |||||||||| ||||||| |||||| |||||| ||| |||||  |||||||||    
T  15403184 cataaaaatcaaaccgtt-acccgttttcgatgtcgttttcgcctacacgctcctgacacttagccctatcataat 15403258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 404 - 486
Target Start/End: Complemental strand, 17375536 - 17375454
Alignment:
Q  404 cttcataaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaaca-cttcatttagacatgaattca 486  Q
    ||||| ||||||||||| ||||| ||  | ||||||||||||||||||||| |||| ||||| ||||| ||| |||||||||||    
T  17375536 cttcacaaaatggaatacccatggtacaaatcaacaacaacaacatatctaattca-caacaacttcagttaaacatgaattca 17375454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 595 - 653
Target Start/End: Original strand, 44346839 - 44346897
Alignment:
Q  595 gaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaaca 653  Q
    |||| ||||| ||||||||||||||||| |||| |  |||||||| |||||||||||||    
T  44346839 gaattatgcaaacccaagccatgaattatcatcaacgacatcactaaacaacaacaaca 44346897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 595 - 653
Target Start/End: Complemental strand, 53704968 - 53704910
Alignment:
Q  595 gaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaaca 653  Q
    |||| ||||| ||||||||||||||||| |||| | ||||| ||| |||||||||||||    
T  53704968 gaattatgcaaacccaagccatgaattatcatcaacaacatgactaaacaacaacaaca 53704910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 38 - 116
Target Start/End: Complemental strand, 54363894 - 54363816
Alignment:
Q  38 gcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataat 116  Q
    |||||||||| |||||||||||||  | ||| |||||||||||| |||||| |||| | ||| |||||  |||||||||    
T  54363894 gcgcataaaattcaaaccgttaattggattttgatgccgttttcgcctacacgctcgtgacacttagctctatcataat 54363816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 547 - 616
Target Start/End: Original strand, 14951727 - 14951795
Alignment:
Q  547 ttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccat 616  Q
    ||||||| ||| || ||||||||||  ||||| |||||||||| | |||||||||||| |||||||||||    
T  14951727 ttttcaccaaaacaccaacaacaatccatttctcaacaacaaa-tcatgaatcatgcaaacccaagccat 14951795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 15371663 - 15371720
Alignment:
Q  13 tcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcg 70  Q
    ||||||||||||| |  |||||||||  |||||||||||||||||||| | |||||||    
T  15371663 tcagattttcaaccttcacgttttcggacataaaaatcaaaccgttaacccgttttcg 15371720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 438 - 486
Target Start/End: Complemental strand, 19622390 - 19622341
Alignment:
Q  438 caacaacaacatatctacttcaacaac-acttcatttagacatgaattca 486  Q
    ||||||||||||||||| ||||||||| ||||| |||| |||||||||||    
T  19622390 caacaacaacatatctagttcaacaacaacttcgtttaaacatgaattca 19622341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 548 - 612
Target Start/End: Complemental strand, 5682816 - 5682753
Alignment:
Q  548 tttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaag 612  Q
    |||||| |||||| ||||||||||  ||||| |||||||||| | |||||||||||| |||||||    
T  5682816 tttcacaaaaccaccaacaacaatccatttctcaacaacaaa-tcatgaatcatgcaaacccaag 5682753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 206 - 262
Target Start/End: Complemental strand, 5682991 - 5682936
Alignment:
Q  206 tttcaaacgaaactcccgttttctcccaaaacgactcgactatcataaccacgacat 262  Q
    ||||| |||||| |||||||||||||| |||||||||||||| || |||||| ||||    
T  5682991 tttcacacgaaaatcccgttttctccc-aaacgactcgactaacacaaccacaacat 5682936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 588 - 660
Target Start/End: Complemental strand, 19822018 - 19821946
Alignment:
Q  588 aaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||| |||||| ||| ||||||||||||||||| | || | | |||||||| || ||||||||||||| ||||    
T  19822018 aaatcatgaattatgaatacccaagccatgaatcatcaacaacaacatcacatagcaacaacaacatcaattg 19821946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 588 - 660
Target Start/End: Complemental strand, 45459097 - 45459025
Alignment:
Q  588 aaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||| |||||||||||| |||||||||||| |||| | || | ||||| || || ||||||||||||| ||||    
T  45459097 aaatcatgaatcatgcaaacccaagccatggattatcttcaacaacatgacatatcaacaacaacatcaattg 45459025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 400; Significance: 0; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 400; E-Value: 0
Query Start/End: Original strand, 30 - 660
Target Start/End: Complemental strand, 10305 - 9685
Alignment:
Q  30 acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataatgcacagaaaaatc 129  Q
    ||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  10305 acgttttcctgcataaaaatcaaaccgttaatccgttttcgatgccgttttcacctacatgctcctaacacttagcactatcataatgcacagaaaaatc 10206  T
Q  130 ccagtttcaacaacctcaaattcattttacaagcctcacacaaacactcattttccaaaacggttaacaaatgaattttcaaacgaaactcccgttttct 229  Q
     | ||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  10205 tctgtttctacatcctcaaattcattttacaaacctcacacaaacactcattttccaaaacggttaacaaatgaattttcaaacgaaactcccgttttat 10106  T
Q  230 cccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaaccacataggcaactcaatcaacaacttt 329  Q
    ||||||||||||||||||||||||||||     |||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||| |||||    
T  10105 cccaaaacgactcgactatcataaccac----aacataaaaatagaaattccatcaagtttaactcatccatccacatagacaactcagtcaacgacttt 10010  T
Q  330 gtatatcaaatttca-ttttggtgcttcacatgaccatctagcacaattttaccaatacaaacaacnnnnnnnnncttcataaaatggaatatccatgat 428  Q
    |||| ||||||| || ||| ||| |||||||||| |||||| ||||| || ||||| |||||||||          |||||||||||| ||| |||||||    
T  10009 gtatgtcaaattccactttgggttcttcacatgaacatctaacacaacttcaccaacacaaacaacttat------ttcataaaatgggatacccatgat 9916  T
Q  429 atcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacacaatatccaaatccaacaattgagt 528  Q
    |||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||     
T  9915 atcattcaaccacaacaacatatctaattcaacaatacttcatttagacatgaattcaaccatcattcgacaacacaatatcccaatccaacaattgagc 9816  T
Q  529 aaaactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatcc 628  Q
    ||||| ||||||||  | ||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  9815 aaaacacataagtatccattttcaccaaaccaacaacaacaacttatttcacaacaac-aaattatgaatcatgcatacccaagccatgaattagcatcc 9717  T
Q  629 ataacatcacttaacaacaacaacatctattg 660  Q
    ||||| ||||||||||||||||||||||||||    
T  9716 ataacgtcacttaacaacaacaacatctattg 9685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 375; Significance: 0; HSPs: 6)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 375; E-Value: 0
Query Start/End: Original strand, 76 - 660
Target Start/End: Complemental strand, 187281 - 186703
Alignment:
Q  76 gttttcacctacatgctcctaacaattagcagtatcataatgcacagaaaaatcccagtttcaacaacctcaaattcattttacaagcctcacacaaaca 175  Q
    |||||||| ||| || |||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||    
T  187281 gttttcacatacgtgttcctaacatttagcactatcataatgcacagaaaaatcccaatttcaacaacctcaaattcattttacaaatctcacacaaaca 187182  T
Q  176 ctcattttccaaaacggttaacaaatgaattttcaaacgaaactcccgttttctcccaaaacgactcgactatcataaccacgacatacataaaaataga 275  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||     ||||||||| |||    
T  187181 ctcattttccaaaacggttaacatatgaattttcaaacgaaactcccgttttctcccaaaacgacttgactttcataaccac----aacataaaaacaga 187086  T
Q  276 aattccatcaagtttaactcatccaaccacataggcaactcaatcaacaactttgtatatcaaatttca-ttttggtgcttcacatgaccatctagcaca 374  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| || ||| ||| |||||||||| |||||||||||    
T  187085 aattccatcaagtttaactcatccaaccacatagacaactcagtcaacaactttgtatatcaaattccactttgggttcttcacatgaacatctagcaca 186986  T
Q  375 attttaccaatacaaacaacnnnnnnnnncttcataaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaacacttcattta 474  Q
    | |  |||||||||||||||          ||||||||||||||||   |||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  186985 actccaccaatacaaacaacttat------ttcataaaatggaatacttatgatatcattcaataacaacaatatatctacttcaacaacacttcattta 186892  T
Q  475 gacatgaattcaaccataattcaacaacacaatatccaaatccaacaattgagtaaaactcataagtactccttttcactaaac---caacaacaacaat 571  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||  | ||||||| ||||   ||||||||||||     
T  186891 gacatgaattcaaccataattcaacaacacaatatcccaatccaacaattgagcaaaacacataagtatccattttcaccaaaccaacaacaacaacaac 186792  T
Q  572 ttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  186791 ttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 186703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 263 - 660
Target Start/End: Complemental strand, 194057 - 193665
Alignment:
Q  263 acataaaaatagaaattccatcaagtttaactcatccaaccacataggcaactcaatcaacaactttgtatatcaaatttcattttgg-tgcttcacatg 361  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| || ||||| | |||||||||    
T  194057 acataaaaacagaaattccatcaagtttaactcatccaaccacatagacaactcagtcaacaactttgtatatcaaattccactttgggttcttcacatg 193958  T
Q  362 accatctagcacaattttaccaatacaaacaacnnnnnnnnncttcataaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaac 461  Q
    | |||||||||||| |  |||||||||||||||          ||||||||||||||||   ||||||||||||||||||||||| ||||||||||||||    
T  193957 aacatctagcacaactccaccaatacaaacaacttat------ttcataaaatggaatacttatgatatcattcaacaacaacaagatatctacttcaac 193864  T
Q  462 aacacttcatttagacatgaattcaaccataattcaacaacacaatatccaaatccaacaattgagtaaaactcataagtactccttttcactaaaccaa 561  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||  | ||||||| |||||||    
T  193863 aacacttcatttagacatgaattcaaccataattcaacaacacaatatcccaatccaacaattgagcaaaacacataagtatccattttcacgaaaccaa 193764  T
Q  562 caacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  193763 caacaacaacttatttcgcaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 193665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 6 - 116
Target Start/End: Original strand, 60032 - 60143
Alignment:
Q  6 gacatcatcagattttcaacttct-acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattag 104  Q
    |||| |||||||||||| | || | |||||||||||  |||||| ||||||||||| | |||||||||||||||||| |||||| |||||| ||| ||||    
T  60032 gacaacatcagattttctaattttcacgttttcgcgagtaaaaaccaaaccgttaacccgttttcgatgccgttttcgcctacacgctcctgacacttag 60131  T
Q  105 cagtatcataat 116  Q
    || |||||||||    
T  60132 cactatcataat 60143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 140
Target Start/End: Original strand, 75395 - 75530
Alignment:
Q  6 gacatcatcagattttcaacttct-acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattag 104  Q
    |||| |||||||||||| | || | |||||||||||| |||||  ||||| ||||| | |||||||||||||||||| |||||  |||||| ||| ||||    
T  75395 gacaacatcagattttccaattttcacgttttcgcgcgtaaaatccaaactgttaacccgttttcgatgccgttttcgcctacgcgctcctgacatttag 75494  T
Q  105 cagtatcataatgcacagaaaaatcccagtttcaac 140  Q
    |  ||| |||||  |||||||||| | |||||||||    
T  75495 ctctataataatctacagaaaaattcaagtttcaac 75530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 80
Target Start/End: Complemental strand, 187662 - 187612
Alignment:
Q  30 acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgtttt 80  Q
    |||||||||||  |||||||||||||||||||| |||||||||||||||||    
T  187662 acgttttcgcgtgtaaaaatcaaaccgttaatccgttttcgatgccgtttt 187612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 127
Target Start/End: Original strand, 72570 - 72667
Alignment:
Q  30 acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataatgcacagaaaaa 127  Q
    |||||||||||| |||||  ||||| ||||| | |||||| || |||||||| |||||| |||||| ||| |||||  ||| |||||  |||||||||    
T  72570 acgttttcgcgcgtaaaatccaaactgttaacccgttttcaataccgttttcgcctacacgctcctgacacttagctctataataatctacagaaaaa 72667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 373; Significance: 0; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 373; E-Value: 0
Query Start/End: Original strand, 6 - 660
Target Start/End: Complemental strand, 7361 - 6721
Alignment:
Q  6 gacatcatcagattttcaacttct-acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattag 104  Q
    |||| |||||||||||| | || | |||||||||||| |||||| |||||  ||||||  ||||||||| ||||||||||||||||||||||||| ||||    
T  7361 gacaacatcagattttccaattttcacgttttcgcgcgtaaaaaccaaacttttaatccattttcgatgtcgttttcacctacatgctcctaacacttag 7262  T
Q  105 cagtatcataatgcacagaaaaatcccagtttcaacaacctcaaattcattttacaagcctcacacaaacactcattttccaaaacggttaacaaatgaa 204  Q
    || ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||    
T  7261 cactatcataatgcacagaaaaatcccagtttcaccaacctcaaattcattttacaaacctcacacaaacaaccattttccaaaacggttaacaaatgaa 7162  T
Q  205 ttttcaaacgaaactcccgttttctcccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaacca 304  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| |     ||| ||||| | ||||||||||||||||||||||||||||||    
T  7161 ttttcaaacgaaactcccgttttctcccaaaacgactcgactatcaaaaccgc----aacacaaaaacataaattccatcaagtttaactcatccaacca 7066  T
Q  305 cataggcaactcaatcaacaactttgtatatcaaatttca-ttttggtgcttcacatgaccatctagcacaattttaccaatacaaacaacnnnnnnnnn 403  Q
    ||||| |||||||||||| |||||||||||| |||||||| ||| ||| |||||||||||||||||||| || || |||||||||||||||             
T  7065 catagacaactcaatcaataactttgtatattaaatttcactttgggtccttcacatgaccatctagcagaacttcaccaatacaaacaacttat----- 6971  T
Q  404 cttcataaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaaca 503  Q
     ||||||||||||||||   ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| |    
T  6970 -ttcataaaatggaatacttatgttatcattcaagaacaacaacatatctacttcaacaacacttcatttagacatgaattcaatcataatttaacaata 6872  T
Q  504 caatatccaaatccaacaattgagtaaaactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgc 603  Q
    |||||||| ||||||||||||||| ||||| ||||||||  | |||||     |||||||||||||| ||||||||||||||| ||||||||||||||||    
T  6871 caatatcccaatccaacaattgagcaaaacacataagtatccattttc-----accaacaacaacaacttatttcacaacaac-aaattatgaatcatgc 6778  T
Q  604 atacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  6777 atacccaagccatgaattagcatccataacatcacttaacaacaacaagatctattg 6721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 342; Significance: 0; HSPs: 5)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 342; E-Value: 0
Query Start/End: Original strand, 33 - 660
Target Start/End: Original strand, 94435 - 95052
Alignment:
Q  33 ttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataatgcacagaaaaatccca 132  Q
    |||||||||||||||| |||||| |||||| |||||||||||||||||||||||| || || | ||| |||||  |||| |||||  ||| ||||| | |    
T  94435 ttttcgcgcataaaaaccaaacctttaatccgttttcgatgccgttttcacctacgtgttcatgacacttagccctatcttaatgtgcagcaaaattcaa 94534  T
Q  133 gtttcaacaacctcaaattcattttacaa-gcctcacacaaacactcattttccaaaacggttaacaaatgaattttcaaacgaaactcccgtttt-ctc 230  Q
    |||||||||  | |||||||||||| ||| |||| |||||| |||||||||||||||||||||||||||||||||||||  |||||||| |||||| |||    
T  94535 gtttcaacattcccaaattcattttccaaagccttacacaa-cactcattttccaaaacggttaacaaatgaattttcacccgaaactcacgtttttctc 94633  T
Q  231 ccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaaccacataggcaactcaatcaacaactttg 330  Q
    |||||||||||||||||||| ||| || || ||    |||| ||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||    
T  94634 ccaaaacgactcgactatcacaactacaaccta----aaaacagaaattccatcacgtttaactcatccaaccacatagacaactcagtcaacaactttg 94729  T
Q  331 tatatcaaatttcattttggtgcttcacatgaccatctagcacaattttaccaatacaaacaacnnnnnnnnncttcataaaatggaatatccatgatat 430  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| || |||||||||||||||          |||||||||||||||| ||||| |||    
T  94730 tatatcaaatttcactttggtccttcacatgaccatctagcacaacttcaccaatacaaacaacttat------ttcataaaatggaataaccatgttat 94823  T
Q  431 cattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacacaatatccaaatccaacaattgagtaa 530  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||| ||    
T  94824 cattcaacaacaacaacatatctactccaacaacacttcatttagacatgaattcaatcataattcaacaacacaatatcacaatccaacaattgagcaa 94923  T
Q  531 aactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccat 630  Q
    ||| ||||||||  | ||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  94924 aacacataagtatccattttcaccaaaccaacaacaacaacttatttcacaacaac-aaattatgaatcatgcatacccaaaccatgaattagcatccat 95022  T
Q  631 aacatcacttaacaacaacaacatctattg 660  Q
    ||||||||||| ||||||||||||||||||    
T  95023 aacatcacttatcaacaacaacatctattg 95052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 180 - 660
Target Start/End: Complemental strand, 25363 - 24898
Alignment:
Q  180 ttttccaaaacggttaacaaatgaattttcaaacgaaactcccgttttctcccaaaacgactcgactatcataaccacgacatacataaaaatagaaatt 279  Q
    |||||||||||||||||||| ||||||||||  |||||| |||| |||||| |||| |||||||||||||| ||  || |||||    |||| |||||||    
T  25363 ttttccaaaacggttaacaattgaattttcactcgaaacccccgatttctcacaaa-cgactcgactatcacaattacaacata----aaaacagaaatt 25269  T
Q  280 ccatcaagtttaactcatccaaccacataggcaactcaatcaacaactttgtatatcaaatttcattttgg-tgcttcacatgaccatctagcacaattt 378  Q
    ||| ||||||||||||||  |||||||||| | ||||| ||||||| |||||||||||||||||| ||||| | |||||||||| |||||||||||| ||    
T  25268 ccaacaagtttaactcatttaaccacatagactactcagtcaacaaatttgtatatcaaatttcactttgggtccttcacatgaacatctagcacaactt 25169  T
Q  379 taccaatacaaacaacnnnnnnnnncttcataaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagaca 478  Q
     |||||||||||||||          |||||||||||||||| |||||||||||||||||||||||| |||||| | ||||||||||||||||||| |||    
T  25168 caccaatacaaacaactaat------ttcataaaatggaataaccatgatatcattcaacaacaacagcatatccaattcaacaacacttcatttaaaca 25075  T
Q  479 tgaattcaaccataattcaacaacacaatatccaaatccaacaattgagtaaaactcataagtactccttttcactaaaccaacaacaacaatttatttc 578  Q
    ||||||||||||||||||||||||||||||||| ||| |||||||||||  ||    |||||||||| ||||||| |||||||||||||||| |||||||    
T  25074 tgaattcaaccataattcaacaacacaatatcccaattcaacaattgagcgaa----ataagtactcattttcaccaaaccaacaacaacaacttatttc 24979  T
Q  579 acaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||||||| ||||||||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  24978 acaacaac-aaattatgaatcatgaatacccaagccaagaattaacatccataacatcacttaacaacaacaacatctattg 24898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #3
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 6 - 140
Target Start/End: Complemental strand, 113415 - 113281
Alignment:
Q  6 gacatcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagc 105  Q
    |||| ||||| ||||||||| | ||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||| |||| ||| |||||    
T  113415 gacaacatcaaattttcaacctttacgttttcgcgcataaaattcaaaccattaatttgttttcgatgccgttttcacctacatgttcctcacacttagc 113316  T
Q  106 agtatcataatgcacagaaaaatcccagtttcaac 140  Q
      |||||||||  |||||||||| | |||||||||    
T  113315 cctatcataatctacagaaaaattcaagtttcaac 113281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 6 - 140
Target Start/End: Complemental strand, 118249 - 118115
Alignment:
Q  6 gacatcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagc 105  Q
    |||| ||||||||||||||| |  || ||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||| |||| ||| |||||    
T  118249 gacaacatcagattttcaaccttcacattttcgcgcataaaaatcataccgttaatttgttttcgatgtcgttttcacctacatgttcctcacacttagc 118150  T
Q  106 agtatcataatgcacagaaaaatcccagtttcaac 140  Q
      |||||||||  |||||||||| | |||||||||    
T  118149 cctatcataatctacagaaaaattcaagtttcaac 118115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #5
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 15 - 87
Target Start/End: Complemental strand, 25505 - 25433
Alignment:
Q  15 agattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctac 87  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  25505 agattttcaacctccacgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcacctac 25433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 326; Significance: 0; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 326; E-Value: 0
Query Start/End: Original strand, 30 - 641
Target Start/End: Complemental strand, 23302 - 22701
Alignment:
Q  30 acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataatgcacagaaaaatc 129  Q
    |||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||| || || | ||| |||||  |||| |||||  |||||||||     
T  23302 acgttttcgcgcgtaaaaaccaaaccgttaatccgttttcgatgccgttttcacctacgtgttcatgacacttagccctatcttaatgtgcagaaaaatt 23203  T
Q  130 ccagtttcaacaacctcaaattcattttacaa-gcctcacacaaacactcattttccaaaacggttaacaaatgaattttcaaacgaaactcccgtttt- 227  Q
    | ||||||||||  |  ||||||||||| ||| |||| |||||| |||||||||||||||||||||||||||||||||||||  |||||||| ||||||     
T  23202 caagtttcaacattccaaaattcattttccaaagccttacacaa-cactcattttccaaaacggttaacaaatgaattttcacccgaaactctcgttttt 23104  T
Q  228 ctcccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaaccacataggcaactcaatcaacaact 327  Q
    ||||||||||||||||||||||| ||| || || ||    |||| ||||||||||||| ||||||||||||||||||||||| ||||||| |||||||||    
T  23103 ctcccaaaacgactcgactatcacaactacaaccta----aaaacagaaattccatcatgtttaactcatccaaccacatagacaactcagtcaacaact 23008  T
Q  328 ttgtatatcaaatttcattttggtgcttcacatgaccatctagcacaattttaccaatacaaacaacnnnnnnnnncttcataaaatggaatatccatga 427  Q
    ||||||||||| ||||| |||||| |||||||||||| |||||||||| || |||||||||||||||          |||||||||||||||| |||||     
T  23007 ttgtatatcaagtttcactttggtccttcacatgaccgtctagcacaacttcaccaatacaaacaacttat------ttcataaaatggaatacccatgt 22914  T
Q  428 tatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacacaatatccaaatccaacaattgag 527  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  |||||||||||||||    
T  22913 tatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaatcataattcaacaacacaatatcacaatccaacaattgag 22814  T
Q  528 taaaactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatc 627  Q
     ||||| ||||||||  | ||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  22813 caaaacacataagtatccattttcaccaaaccaacaacaacaacttatttcacaacaac-aaattatgaatcatgcatacccaaaccatgaattagcatc 22715  T
Q  628 cataacatcactta 641  Q
    ||||||||||||||    
T  22714 cataacatcactta 22701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 320; Significance: 1e-180; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 30 - 660
Target Start/End: Original strand, 55038 - 55658
Alignment:
Q  30 acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataatgcacagaaaaatc 129  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |  || | ||| || ||  ||||  | || | ||||||||     
T  55038 acgttttcgcgcataaaaatcaaaccgttaatctgtttccgatgccgttttcacctacgttttcatgacacttggccctatctcagtgtaaagaaaaatt 55137  T
Q  130 ccagtttcaacaacctcaaattcattttac-aagcctcacacaaacactcattttccaaaacggttaacaaatgaattttcaaacgaaactcccgttttc 228  Q
    | ||||||||||  | |||||||||||| | |||||| ||||||  ||||||||||||||||||||||||||||||||||||  ||||||||||| ||||    
T  55138 caagtttcaacattcccaaattcattttcccaagccttacacaag-actcattttccaaaacggttaacaaatgaattttcacccgaaactcccgatttc 55236  T
Q  229 tcccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaaccacataggcaactcaatcaacaactt 328  Q
    ||||| | |||||||||||||| | | || ||||     |||| | |||||| ||||||||||||||||||||||| |||| ||||||| |||| |||||    
T  55237 tcccaca-cgactcgactatcacagctacaacatg----aaaacataaattctatcaagtttaactcatccaaccatatagacaactcagtcaagaactt 55331  T
Q  329 tgtatatcaaatttcattttgg-tgcttcacatgaccatctagcacaattttaccaatacaaacaacnnnnnnnnncttcataaaatggaatatccatga 427  Q
    |||||||||||||||| ||||| | |||||||||| |||||||||||| || || ||||||||||||         ||| ||||||||||||| ||||||    
T  55332 tgtatatcaaatttcactttgggttcttcacatgaacatctagcacaacttcacgaatacaaacaactta------ctttataaaatggaatacccatga 55425  T
Q  428 tatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacacaatatccaaatccaacaattgag 527  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  55426 tatcattcaacaacaacaacatatctacttcaacaacacttcacttagacatgaattgaaccataattcaacaacacaatatcccaatccaacaattgag 55525  T
Q  528 taaaactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatc 627  Q
     ||||| ||||||||  | ||||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  55526 caaaacacataagtatccattttcaccaaaccaacaacaacaacttattttacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatc 55625  T
Q  628 cataacatcacttaacaacaacaacatctattg 660  Q
    |||||||||||||||||||||||||||||||||    
T  55626 cataacatcacttaacaacaacaacatctattg 55658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597 (Bit Score: 319; Significance: 1e-180; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 319; E-Value: 1e-180
Query Start/End: Original strand, 20 - 660
Target Start/End: Complemental strand, 1786 - 1156
Alignment:
Q  20 ttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataatgca 119  Q
    ||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || || | ||| |||||  |||   | || |    
T  1786 ttcaactttcacgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcacctacttgttcatgacacttagccctatatcagtgta 1687  T
Q  120 cagaaaaatcccagtttcaacaacctcaaattcattttacaa-gcctcacacaaacactcattttc-caaaacggttaacaaatgaattttcaaacgaaa 217  Q
    ||||||||| | ||||||||||  | |||||||||||| ||| |||| |||||| ||||||||||  ||||||||||||||| ||||||||||  |||||    
T  1686 cagaaaaattcaagtttcaacattcccaaattcattttccaaagccttacacaa-cactcattttttcaaaacggttaacaactgaattttcacccgaaa 1588  T
Q  218 ctcccgttttctcccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaaccacataggcaactca 317  Q
    | |||  ||| ||||||| ||||||||||| || ||| ||||||||    ||||||||||||||| |||||| ||||||||||||||||||| |||||||    
T  1587 cccccaatttttcccaaa-cgactcgactaacacaactacgacata----aaaatagaaattccaacaagttcaactcatccaaccacatagacaactca 1493  T
Q  318 atcaacaactttgtatatcaaatttcattttggtgcttcacatgaccatctagcacaattttaccaatacaaacaacnnnnnnnnncttcataaaatgga 417  Q
     |||||||||||||||||||||||||| |||||| |||||||||| ||||||||| || || |||||||||||||||          |||||||||||||    
T  1492 gtcaacaactttgtatatcaaatttcactttggtccttcacatgatcatctagcataacttcaccaatacaaacaacttat------ttcataaaatgga 1399  T
Q  418 atatccatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacacaatatccaaatcc 517  Q
    |||   |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| | |||||    
T  1398 atacttatgatatcattcaataacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacttcacaatattccaatcc 1299  T
Q  518 aacaattgagtaaaactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatg 617  Q
    |||||||||| ||||| ||||||||  | ||||||| |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  1298 aacaattgagcaaaacacataagtatccattttcaccaaaccaacaacaacaacttatttctcaacaacaaaattatgaatcatgcatacccaagccatg 1199  T
Q  618 aattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  1198 aattagcattcataacatcacttaacaacaacaacatctattg 1156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 317; Significance: 1e-178; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 317; E-Value: 1e-178
Query Start/End: Original strand, 14 - 660
Target Start/End: Complemental strand, 27330558 - 27329925
Alignment:
Q  14 cagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcat 113  Q
    |||||||||||| |  ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||| || || | ||| |||||  |||| |    
T  27330558 cagattttcaaccttcacgttttcgcgcataaaaatcaaactgttaatccgttttcgataccgttttcacctacgtgttcatgacacttagccctatctt 27330459  T
Q  114 aatgcacagaaaaatcccagtttcaacaacctcaaattcattttaca-agcctcacacaaacactcatttt-ccaaaacggttaacaaatgaattttcaa 211  Q
    |||| |||||||||| | ||||||||||  | |||||||||||| || ||||| |||||| |||||||||| |||||| | ||||||| ||||||||||     
T  27330458 aatgtacagaaaaattcaagtttcaacattcccaaattcattttccacagccttacacaa-cactcatttttccaaaatgattaacaattgaattttcac 27330360  T
Q  212 acgaaactcccgttttctcccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaaccacataggc 311  Q
     |||||| | || ||||||||||| ||||||||| |||| ||| || |||||    |||| ||||||||||||||||||||||||||||||||||||| |    
T  27330359 ccgaaaccctcgatttctcccaaa-cgactcgaccatcacaactacaacata----aaaacagaaattccatcaagtttaactcatccaaccacatagac 27330265  T
Q  312 aactcaatcaacaactttgtatatcaaatttcattttggtgc-ttcacatgaccatctagcacaattttaccaatacaaacaacnnnnnnnnncttcata 410  Q
    |||||| |||||||||||||||||||||||||| |||||  | ||||||||| |||||||||||| || |||||||||||||||         |||||||    
T  27330264 aactcagtcaacaactttgtatatcaaatttcactttgggtcattcacatgaacatctagcacaacttcaccaatacaaacaacta-------cttcata 27330172  T
Q  411 aaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacacaatatc 510  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27330171 aaatggaatacccatgatatcattcaacaacaacaacatatctaattcaacaacacttcatttagacatgaattcaaccataattcaacaacacaatatc 27330072  T
Q  511 caaatccaacaa-ttgagtaaaactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcataccc 609  Q
    | |||||||||| ||||| |||||||||||||||   ||||||| |||||||||||||||| |||||| |||||    ||||||||||||||||||||||    
T  27330071 ccaatccaacaatttgagcaaaactcataagtacctattttcaccaaaccaacaacaacaacttatttgacaac----aaattatgaatcatgcataccc 27329976  T
Q  610 aagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  27329975 aagccatgaattaacatccataacatcacttaacaacaacaacatccattg 27329925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 215; E-Value: 1e-117
Query Start/End: Original strand, 6 - 309
Target Start/End: Complemental strand, 20825573 - 20825274
Alignment:
Q  6 gacatcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagc 105  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||| |||||    
T  20825573 gacaacatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgtcgttttcgcctacatgctcctaacacttagc 20825474  T
Q  106 agtatcataatgcacagaaaaatcccagtttcaacaacctcaaattcattttacaagcctcacacaaacactcattttccaaaacggttaacaaatgaat 205  Q
    | |||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  20825473 actatcataatgcacagaaaaatcaccgtttcaacaacctcaaattcattttacaaacctcacacaaacactcattttccaaaacggttaacaaatgaat 20825374  T
Q  206 tttcaaacgaaactcccgttttctcccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaaccac 305  Q
    |||||||||||||||||||||||| ||||| |||||||||||   ||||||      |||| |||| |||||||||||||||||||||||||||||||||    
T  20825373 tttcaaacgaaactcccgttttcttccaaatcgactcgactaatgtaacca----taacattaaaacagaaattccatcaagtttaactcatccaaccac 20825278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 447 - 660
Target Start/End: Original strand, 35054621 - 35054833
Alignment:
Q  447 catatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacacaatatccaaatccaacaattgagtaaaactcataagtactcc 546  Q
    |||||||| |||||||| |||||||| ||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||| |     
T  35054621 catatctaattcaacaatacttcattgagacatgaattcaaccataattcaacagcacaatatctcaatccaacaattgagtaaaactcataagtaccca 35054720  T
Q  547 ttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaac 646  Q
    ||||||| |||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35054721 ttttcaccaaaccaacaacaacaacttattccacaacaac-aaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaac 35054819  T
Q  647 aacaacatctattg 660  Q
    ||||||||| ||||    
T  35054820 aacaacatccattg 35054833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 405 - 653
Target Start/End: Original strand, 21859834 - 21860081
Alignment:
Q  405 ttcataaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacac 504  Q
    |||| ||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  21859834 ttcacaaaatggaatacctatgatatcattcaacaacaacaacatatctaattcaacaacacttcatttagacatgaattcaaccataaatcaacaacac 21859933  T
Q  505 aatatccaaatccaacaattgagtaaaactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgca 604  Q
    ||||||| ||||||||||||||| |||||||||||| |||| ||||||| |||||||||||||||||| ||||| ||||||| |||||||||||||||||    
T  21859934 aatatcctaatccaacaattgagaaaaactcataagcactcattttcaccaaaccaacaacaacaattcatttctcaacaac-aaattatgaatcatgca 21860032  T
Q  605 tacccaagccatgaattagcatccataacatcacttaacaacaacaaca 653  Q
     |||| ||||||| || | |||| | || || ||| |||||||||||||    
T  21860033 aacccgagccatgtatcatcatcaacaatatgactaaacaacaacaaca 21860081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 14 - 394
Target Start/End: Original strand, 35054221 - 35054598
Alignment:
Q  14 cagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcat 113  Q
    |||||||||||| || | ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||   |||  ||||  |||| |    
T  35054221 cagattttcaacctccaagttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcacctacgtgttcaagacacctagccctatctt 35054320  T
Q  114 aatgcacagaaaaatcccagtttcaacaacctcaaattcattttacaa-gcctcacacaaacactcatttt-ccaaaacggttaacaaatgaattttcaa 211  Q
    |||| | |||||||| | ||||||||||  | |||||||||||| ||| |||| |||||| |||||||||| |||||||||||||||| ||||||||||     
T  35054321 aatgtaaagaaaaattcaagtttcaacattcccaaattcattttccaaagccttacacaa-cactcatttttccaaaacggttaacaattgaattttcac 35054419  T
Q  212 acgaaactcccgttttctcccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaaccacataggc 311  Q
      ||||| | || |||||||| ||||||||||||||||| ||| ||     ||||||||| |||||||||| |||||||||||||||||||||||||  |    
T  35054420 ctgaaaccctcgatttctccc-aaacgactcgactatcacaactac----aacataaaaacagaaattccaacaagtttaactcatccaaccacatatac 35054514  T
Q  312 aactcaatcaacaactttgtatatcaaatttca-ttttggtgcttcacatgaccatctagcacaattttaccaatacaaacaac 394  Q
    |||||| |||||||||||||||||||||||||| ||| ||| || ||||||| ||| |||||||| || |||||||||||||||    
T  35054515 aactcagtcaacaactttgtatatcaaatttcactttgggtcctccacatgaacatttagcacaacttcaccaatacaaacaac 35054598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 6 - 140
Target Start/End: Original strand, 51476596 - 51476730
Alignment:
Q  6 gacatcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagc 105  Q
    |||| |||||||||||||||    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| | | |||||    
T  51476596 gacagcatcagattttcaaccctcacgttttcgctcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgttcctgaaacttagc 51476695  T
Q  106 agtatcataatgcacagaaaaatcccagtttcaac 140  Q
      |||||||||  |||||||||| | |||||||||    
T  51476696 cctatcataatctacagaaaaattcaagtttcaac 51476730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 6 - 140
Target Start/End: Original strand, 52983831 - 52983965
Alignment:
Q  6 gacatcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagc 105  Q
    |||| ||||||||||||||| |  ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | | |||||    
T  52983831 gacagcatcagattttcaaccttcacgtttttgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgttcctgaaacttagc 52983930  T
Q  106 agtatcataatgcacagaaaaatcccagtttcaac 140  Q
      |||||||||  ||||||| || | |||||||||    
T  52983931 cctatcataatctacagaaatattcaagtttcaac 52983965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 17148175 - 17148271
Alignment:
Q  20 ttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataat 116  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||| ||||||||||||||||| || ||| |||||||||    
T  17148175 ttcaacttctacgttttcgcgcataaaaatcaaatcgttaatccgttttcgatgcagttttcgcctacatgctcctaacacttggcactatcataat 17148271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 13 - 145
Target Start/End: Original strand, 18824232 - 18824364
Alignment:
Q  13 tcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatca 112  Q
    ||||||||||||| |  |||||||||| |||||||||||||||||||| | |||||||||||| ||||| |||||| |||||| ||| |||||  |||||    
T  18824232 tcagattttcaaccttcacgttttcgcacataaaaatcaaaccgttaacccgttttcgatgccattttcgcctacacgctcctgacacttagctctatca 18824331  T
Q  113 taatgcacagaaaaatcccagtttcaacaacct 145  Q
    ||||  |||||||||| | ||||||||| ||||    
T  18824332 taatctacagaaaaattcaagtttcaaccacct 18824364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 6 - 140
Target Start/End: Complemental strand, 13528157 - 13528022
Alignment:
Q  6 gacatcatcagattttc-aacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattag 104  Q
    |||| |||||||||||| |||||  |||||||||||| |||||  ||||||||||| |  ||||||||| ||||||| |||||| |||||| ||| ||||    
T  13528157 gacaacatcagattttctaactttcacgttttcgcgcgtaaaatccaaaccgttaacccattttcgatgtcgttttcgcctacacgctcctgacacttag 13528058  T
Q  105 cagtatcataatgcacagaaaaatcccagtttcaac 140  Q
    |  |||||||||  |||||||||| | |||||||||    
T  13528057 ccttatcataatctacagaaaaattcaagtttcaac 13528022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 6 - 116
Target Start/End: Original strand, 18270929 - 18271040
Alignment:
Q  6 gacatcatcagattttcaacttct-acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattag 104  Q
    |||| |||||||||||| | || | |||||||||||| |||||  ||||||||||| |||||||||||||||||||| |||||| |||||| ||| ||||    
T  18270929 gacaacatcagattttctaattttcacgttttcgcgcgtaaaatccaaaccgttaacctgttttcgatgccgttttcgcctacacgctcctgacacttag 18271028  T
Q  105 cagtatcataat 116  Q
    |  |||||||||    
T  18271029 ctctatcataat 18271040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 6 - 116
Target Start/End: Original strand, 18275583 - 18275694
Alignment:
Q  6 gacatcatcagattttcaacttct-acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattag 104  Q
    |||| |||||||||||| | || | |||||||||||| |||||  ||||||||||| |||||||||||||||||||| |||||| |||||| ||| ||||    
T  18275583 gacaacatcagattttctaattttcacgttttcgcgcgtaaaatccaaaccgttaacctgttttcgatgccgttttcgcctacacgctcctgacacttag 18275682  T
Q  105 cagtatcataat 116  Q
    |  |||||||||    
T  18275683 ctctatcataat 18275694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 13 - 116
Target Start/End: Original strand, 21473404 - 21473507
Alignment:
Q  13 tcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatca 112  Q
    ||||||||||||| |  ||||||| |  |||||||||||||||||||| | |||||||||||||||||| |||||| |||||| ||| |||||  |||||    
T  21473404 tcagattttcaaccttcacgtttttgaacataaaaatcaaaccgttaacccgttttcgatgccgttttcgcctacacgctcctgacacttagccctatca 21473503  T
Q  113 taat 116  Q
    ||||    
T  21473504 taat 21473507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 555 - 660
Target Start/End: Complemental strand, 51627938 - 51627834
Alignment:
Q  555 aaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacat 654  Q
    |||||| ||||||||  | ||||| ||||| |||| | |||||||||||||||||||||||||||||| |||| | | ||||||||| ||||||||||||    
T  51627938 aaaccaccaacaacatctcatttctcaacagcaaa-tcatgaatcatgcatacccaagccatgaattatcatcaacatcatcacttagcaacaacaacat 51627840  T
Q  655 ctattg 660  Q
    | ||||    
T  51627839 caattg 51627834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 116
Target Start/End: Complemental strand, 7321041 - 7320930
Alignment:
Q  6 gacatcatcagattttc-aacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattag 104  Q
    |||| |||||||||||| || ||| | |||||||||| |||||  ||||||||||||| |||||||||| ||||||| |||||| |||||| ||| ||||    
T  7321041 gacaacatcagattttccaatttcaatgttttcgcgcgtaaaatccaaaccgttaatccgttttcgatgtcgttttcgcctacacgctcctgacacttag 7320942  T
Q  105 cagtatcataat 116  Q
    |  |||||||||    
T  7320941 ctctatcataat 7320930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 548 - 660
Target Start/End: Complemental strand, 13377121 - 13377010
Alignment:
Q  548 tttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaaca 647  Q
    |||||| |||||  ||||||||||| ||||| || ||||||| | |||||| ||| |||| |||||||||||| | |||| | ||||||||||| |||||    
T  13377121 tttcacaaaaccgccaacaacaattcatttctcatcaacaaa-tcatgaattatgaatactcaagccatgaatcaacatcaacaacatcacttagcaaca 13377023  T
Q  648 acaacatctattg 660  Q
    |||||||| ||||    
T  13377022 acaacatcaattg 13377010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 584 - 653
Target Start/End: Complemental strand, 22403355 - 22403287
Alignment:
Q  584 aacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaaca 653  Q
    |||||||| |||||||||| | ||||||||||||||||| |||| | ||||| |||||||||||||||||    
T  22403355 aacaaaatcatgaatcatgaa-acccaagccatgaattatcatcaacaacatgacttaacaacaacaaca 22403287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 548 - 660
Target Start/End: Original strand, 20177141 - 20177252
Alignment:
Q  548 tttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaaca 647  Q
    |||||| |||||| ||||||||| | ||||| |  ||||||| | |||||| ||| ||| ||||||||||||| | |||| | ||||||||||| |||||    
T  20177141 tttcacaaaaccaccaacaacaactcatttctcttcaacaaa-tcatgaattatgaatatccaagccatgaatcatcatcaacaacatcacttagcaaca 20177239  T
Q  648 acaacatctattg 660  Q
    |||||||| ||||    
T  20177240 acaacatcaattg 20177252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 588 - 660
Target Start/End: Complemental strand, 35522561 - 35522489
Alignment:
Q  588 aaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||| |||||||||||| ||||||||||||||||| |||| | ||||| || || ||||||||||||| ||||    
T  35522561 aaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacgtatcaacaacaacatcaattg 35522489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 6 - 116
Target Start/End: Original strand, 20058088 - 20058199
Alignment:
Q  6 gacatcatcagattttcaacttct-acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattag 104  Q
    |||| |||||||||||| | || | ||||||||| || |||||  |||||| |||| | |||||||||||||||||| |||||| |||||| ||| ||||    
T  20058088 gacaacatcagattttccaattttcacgttttcgtgcgtaaaatccaaaccattaacccgttttcgatgccgttttcgcctacacgctcctgacagttag 20058187  T
Q  105 cagtatcataat 116  Q
    |  |||||||||    
T  20058188 ctctatcataat 20058199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 593 - 660
Target Start/End: Original strand, 21718238 - 21718305
Alignment:
Q  593 atgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||||||||||| ||||||||||||||||| |||| | ||||| || || ||||||||||||| ||||    
T  21718238 atgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaacaacaacatcaattg 21718305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 593 - 660
Target Start/End: Original strand, 49967660 - 49967727
Alignment:
Q  593 atgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||||||||||| ||| |||| |||||||| |||| | ||||| ||||||||||||||||||| ||||    
T  49967660 atgaatcatgcaaaccgaagcaatgaattatcatcaacaacatgacttaacaacaacaacatcaattg 49967727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 34 - 125
Target Start/End: Original strand, 51324137 - 51324228
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataatgcacagaaa 125  Q
    |||||||| ||||| |||||||||||||| | ||| |||| ||||||| ||||||||||||| ||| || ||  |||||||||  |||||||    
T  51324137 tttcgcgcgtaaaattcaaaccgttaatcggattttgatgtcgttttcgcctacatgctcctgacacttggctctatcataatctacagaaa 51324228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 18853191 - 18853120
Alignment:
Q  163 cctcacacaaacactcattttccaaaacggttaacaaatgaattttcaaacgaaactcccgttttctcccaaa 235  Q
    ||||||| |||||||||||||| |||| |||| ||||  ||| ||||| ||||||||| ||||||||||||||    
T  18853191 cctcacataaacactcattttc-aaaatggttcacaatcgaagtttcacacgaaactctcgttttctcccaaa 18853120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 38055729 - 38055673
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatg 90  Q
    |||||||| |||||  ||||||||||||| | ||| |||||||||||||||||||||    
T  38055729 tttcgcgcgtaaaatgcaaaccgttaatcggattttgatgccgttttcacctacatg 38055673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 34 - 88
Target Start/End: Original strand, 17004254 - 17004308
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctaca 88  Q
    |||||||| |||||  ||||||||||||| | ||| |||||||||||||||||||    
T  17004254 tttcgcgcgtaaaatgcaaaccgttaatcggattttgatgccgttttcacctaca 17004308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 34 - 88
Target Start/End: Complemental strand, 18060397 - 18060343
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctaca 88  Q
    |||||||| |||||  ||||||||||||| | ||| |||||||||||||||||||    
T  18060397 tttcgcgcgtaaaatgcaaaccgttaatcggattttgatgccgttttcacctaca 18060343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 34 - 116
Target Start/End: Complemental strand, 21239464 - 21239382
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataat 116  Q
    |||||||| ||||| |||||||||||||| | ||| |||||||||||  |||||| |||||| ||| || ||  |||||||||    
T  21239464 tttcgcgcgtaaaattcaaaccgttaatcggattttgatgccgtttttgcctacacgctcctgacacttggctctatcataat 21239382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 547 - 653
Target Start/End: Original strand, 22366984 - 22367089
Alignment:
Q  547 ttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaac 646  Q
    ||||||| ||| || ||||||||||  ||||| |||||||||| | |||||||||||| ||||||| |||| || | |||| | || || ||| ||||||    
T  22366984 ttttcaccaaaacaccaacaacaatccatttctcaacaacaaa-tcatgaatcatgcaaacccaagtcatgtatcatcatcaacaatatgactaaacaac 22367082  T
Q  647 aacaaca 653  Q
    |||||||    
T  22367083 aacaaca 22367089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 587 - 649
Target Start/End: Original strand, 27674800 - 27674862
Alignment:
Q  587 aaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaac 649  Q
    ||||| |||||| ||||| ||||||||||||||||| ||   | |||||||||||||||||||    
T  27674800 aaaatcatgaattatgcacacccaagccatgaattatcaataacaacatcacttaacaacaac 27674862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 595 - 653
Target Start/End: Original strand, 41212081 - 41212139
Alignment:
Q  595 gaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaaca 653  Q
    |||| ||||| ||||||||||||||||| |||| | ||||| ||| |||||||||||||    
T  41212081 gaattatgcaaacccaagccatgaattatcatcaacaacatgactaaacaacaacaaca 41212139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 21858910 - 21858971
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcct 95  Q
    |||||||| ||||| |||||||||||||| | ||| |||| ||||||| |||||| ||||||    
T  21858910 tttcgcgcgtaaaattcaaaccgttaatcggattttgatgtcgttttcgcctacacgctcct 21858971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 555 - 660
Target Start/End: Complemental strand, 22143635 - 22143531
Alignment:
Q  555 aaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacat 654  Q
    |||||||||||||||||  ||||| || || |||| | |||||| ||| ||||||||||||||||| | || | | || |||||||| || |||||||||    
T  22143635 aaaccaacaacaacaatcgatttctcatcatcaaa-tcatgaattatgaatacccaagccatgaatcatcaacaacaatatcacttagcagcaacaacat 22143537  T
Q  655 ctattg 660  Q
    | ||||    
T  22143536 caattg 22143531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 555 - 616
Target Start/End: Complemental strand, 44035252 - 44035192
Alignment:
Q  555 aaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccat 616  Q
    |||||| ||||||||||  ||||| |||||||||| |||||||||||||| || ||||||||    
T  44035252 aaaccaccaacaacaatccatttctcaacaacaaa-ttatgaatcatgcaaactcaagccat 44035192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 95
Target Start/End: Complemental strand, 44035610 - 44035549
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcct 95  Q
    |||||||| ||||| |||||||| ||||| | ||| |||| |||||||||||||| ||||||    
T  44035610 tttcgcgcgtaaaattcaaaccgctaatcggattttgatgtcgttttcacctacacgctcct 44035549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 588 - 660
Target Start/End: Complemental strand, 9784342 - 9784270
Alignment:
Q  588 aaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||| ||||||||||||  |||||||||||||| | |||| | ||||| || || ||||||||||||| ||||    
T  9784342 aaatcatgaatcatgcaagcccaagccatgaatgatcatcaacaacatgacatatcaacaacaacatcaattg 9784270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 316; Significance: 1e-178; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 6 - 660
Target Start/End: Original strand, 146031 - 146678
Alignment:
Q  6 gacatcatcagattttcaacttct-acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattag 104  Q
    |||| |||||||||||| | || | |||||||||||| |||||| ||||||||||| | |||||||||||||||||| |||||| |||||| ||| ||||    
T  146031 gacaacatcagattttccaattttcacgttttcgcgcgtaaaaaccaaaccgttaacccgttttcgatgccgttttcgcctacacgctcctgacacttag 146130  T
Q  105 cagtatcataatgcacagaaaaatcccagtttcaacaacctcaaattcattttaca-agcctcacacaaacactcatttt-ccaaaacggttaacaaatg 202  Q
    |  |||| ||||| |||||||||| | ||||||||||  | |||||||||||| || ||||| |||||| |||||||||| |||||| ||||||||| ||    
T  146131 ccctatcttaatgtacagaaaaattcaagtttcaacattcccaaattcattttccacagccttacacaa-cactcatttttccaaaatggttaacaattg 146229  T
Q  203 aattttcaaacgaaactcccgttttctcccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaac 302  Q
    |||||| |  ||||||||| |||||||||||||||||||| ||||||| ||| || || ||    |||| |||||| ||||||||||||| |||||||||    
T  146230 aatttttacccgaaactcctgttttctcccaaaacgactcaactatcacaactacaaccta----aaaaaagaaatcccatcaagtttaattcatccaac 146325  T
Q  303 cacataggcaactcaatcaacaactttgtatatcaaatttcattttgg-tgcttcacatgaccatctagcacaattttaccaatacaaacaacnnnnnnn 401  Q
    ||||||| ||||||||| |||||||||||||||||||||||| ||||| | |||| ||||| |||||||||||| || ||||||||| |||||           
T  146326 cacatagacaactcaattaacaactttgtatatcaaatttcactttgggtccttcgcatgaacatctagcacaacttcaccaatacagacaacttat--- 146422  T
Q  402 nncttcataaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaa 501  Q
       |||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  146423 ---ttcataaaatgggatgcccatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaa 146519  T
Q  502 cacaatatccaaatccaacaa-ttgagtaaaactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatca 600  Q
    |||||||| | |||||||||| ||||| ||||||||||||||| | ||||||| |||||||||||||||| ||||||||||| ||| |||||||||||||    
T  146520 cacaatattccaatccaacaatttgagcaaaactcataagtacccattttcaccaaaccaacaacaacaacttatttcacaaaaac-aaattatgaatca 146618  T
Q  601 tgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  146619 tgcatacccaagccatgaattaacatgcataacatcacttaacaacaacaacatctattg 146678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 6 - 660
Target Start/End: Complemental strand, 18214 - 17582
Alignment:
Q  6 gacatcatcagattttcaacttct-acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattag 104  Q
    |||| |||||||||||| | || | |||||| ||||| |||||| ||||||||||| | |||||||||||||||||| |||||| |||||| ||| ||||    
T  18214 gacaacatcagattttctaattttcacgtttacgcgcgtaaaaaccaaaccgttaacccgttttcgatgccgttttcgcctacacgctcctgacacttag 18115  T
Q  105 cagtatcataatgcacagaaaaatcccagtttcaacaacctcaaattcattttacaa-gcctcacacaaacactcattttcc-aaaacggttaacaaatg 202  Q
    |   ||| ||||| ||| ||||||   |||||||| |    |||||||||||| ||| |||| |||||| |||||||||| | |||||||||||||| ||    
T  18114 cccaatcttaatgtacataaaaattaaagtttcaaaatttccaaattcattttccaaagccttacacaa-cactcatttttctaaaacggttaacaattg 18016  T
Q  203 aattttcaaacgaaactcccgttttctcccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaac 302  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||| ||| || || ||    |||| |||||| |||||||||||||||||||||||    
T  18015 aattttcacccgaaactcccgttttctcccaaaacgactcgactatcacaactacaaccta----aaaacagaaatcccatcaagtttaactcatccaac 17920  T
Q  303 cacataggcaactcaatcaacaactttgtatatcaaatttcattttggtgcttcacatgaccatctagcacaattttaccaatacaaacaacnnnnnnnn 402  Q
    |||| || |||||||||||||||||||||||||||||||||| ||             || ||||||||||||||| |||||||||||||||            
T  17919 cacacagacaactcaatcaacaactttgtatatcaaatttcactt-------------gaacatctagcacaatttcaccaatacaaacaacttat---- 17837  T
Q  403 ncttcataaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaac 502  Q
      ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  17836 --ttcataaaatggaatactcatgatatcattcaacaacaacaacatatctacttcaacaacatttcatttagacattaattcaaccataattcaacaac 17739  T
Q  503 acaatatccaaatccaacaattgagtaaaactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatg 602  Q
    |||||||   |||| |||||||||| |||||  |||||||  | ||| ||| |||||||||||||||| ||||||||||||||| | |||||||||||||    
T  17738 acaatatatcaatctaacaattgagcaaaacatataagtatccatttccaccaaaccaacaacaacaacttatttcacaacaac-atattatgaatcatg 17640  T
Q  603 catacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17639 catacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 17582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 267; Significance: 1e-149; HSPs: 4)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 14 - 660
Target Start/End: Original strand, 87737 - 88352
Alignment:
Q  14 cagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcat 113  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || || | ||| |||||  |||| |    
T  87737 cagattttcaacctccacgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcacctacgtgttcatgacacttagccctatctt 87836  T
Q  114 aatgcacagaaaaatcccagtttcaacaacctcaaattcattttac-aagcctcacacaaacactca-ttttccaaaacggttaacaaatgaattttcaa 211  Q
    |||| |||||||||| | |||||||| |  | |||||| ||||| | |||| | |||| |||||||| |||||||||||||||||||| ||||||||||     
T  87837 aatgtacagaaaaattcaagtttcaaaattcgcaaattaattttccaaagctttacac-aacactcatttttccaaaacggttaacaattgaattttcac 87935  T
Q  212 acgaaactcccgttttctcccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaaccacataggc 311  Q
     ||||||||| | |||||||| ||||||||||||||||| ||| ||     ||||||||| |||||||||| || |||||| |||||||||||||||| |    
T  87936 ccgaaactcctgatttctccc-aaacgactcgactatcacaactac----aacataaaaacagaaattccaacatgtttaattcatccaaccacatagac 88030  T
Q  312 aactcaatcaacaactttgtatatcaaatttca-ttttggtgcttcacatgaccatctagcacaattttaccaatacaaacaacnnnnnnnnncttcata 410  Q
    |||||||| |||||||||||||||||||||||| ||| ||| |||||||||| |||||||||||| || |||||||||||||||          ||||||    
T  88031 aactcaattaacaactttgtatatcaaatttcactttgggtccttcacatgaacatctagcacaacttcaccaatacaaacaacttat------ttcata 88124  T
Q  411 aaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacacaatatc 510  Q
    |||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  88125 aaatggaataaccatgatatcattcaacaacaacaacatatcttattcaacaacacttcatttaaacatgaattcaaccataatgcaacaacacaatatc 88224  T
Q  511 caaatccaacaattgagtaaaactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcataccca 610  Q
    | |||| |||||||||  ||||||||||||||||| ||||||| ||||||||||||                      ||||||| ||||||||||||||    
T  88225 ccaatcaaacaattgaccaaaactcataagtactcattttcaccaaaccaacaaca----------------------aattatggatcatgcataccca 88302  T
Q  611 agccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  88303 agccaagaattagcatccataacatcacttaacaacagcaacatctattg 88352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 30 - 140
Target Start/End: Original strand, 147253 - 147363
Alignment:
Q  30 acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataatgcacagaaaaatc 129  Q
    ||||||||||||||||||  ||||||||||| | |||||||||||||||||| |||||| |||||| ||| |||||  |||||||||  ||||||||||     
T  147253 acgttttcgcgcataaaatccaaaccgttaacccgttttcgatgccgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaatt 147352  T
Q  130 ccagtttcaac 140  Q
    | |||||||||    
T  147353 caagtttcaac 147363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 548 - 660
Target Start/End: Complemental strand, 132531 - 132420
Alignment:
Q  548 tttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaaca 647  Q
    |||||| ||| || |||||||| || ||||| ||||||||||   |||||||||||| ||||||||||||||||| |||| | ||||| |||||||||||    
T  132531 tttcaccaaaacaccaacaacatttcatttctcaacaacaaacc-atgaatcatgcaaacccaagccatgaattatcatcaacaacatgacttaacaaca 132433  T
Q  648 acaacatctattg 660  Q
    |||||||| ||||    
T  132432 acaacatcaattg 132420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #4
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 555 - 660
Target Start/End: Original strand, 11660 - 11764
Alignment:
Q  555 aaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacat 654  Q
    |||||| ||||||||  | ||||| |||||||||| | |||||||||||||| ||||||||||||||| |||| | ||| ||||||| ||||||||||||    
T  11660 aaaccaccaacaacatctcatttctcaacaacaaa-tcatgaatcatgcataaccaagccatgaattatcatcaacaacgtcacttagcaacaacaacat 11758  T
Q  655 ctattg 660  Q
    | ||||    
T  11759 caattg 11764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0303 (Bit Score: 266; Significance: 1e-148; HSPs: 1)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 6 - 660
Target Start/End: Complemental strand, 822 - 206
Alignment:
Q  6 gacatcatcagattttc-aacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattag 104  Q
    |||| |||||||||||| || || |||||||| || | |||||| ||||| ||||||| ||||| |||||||||||| |||||| |||||| ||| ||||    
T  822 gacaacatcagattttccaatttttacgtttttgcacgtaaaaaccaaacagttaatccgttttggatgccgttttcgcctacacgctcctgacacttag 723  T
Q  105 cagtatcataatgcacagaaaaatcccagtttcaacaacctcaaattcattttacaa-gcctcacacaaacactcattttccaaaacggttaacaaatga 203  Q
    |  |||| ||||| |||||||||| | ||||||||||  | |||||||||||| ||| |||| |||||| ||||||||||||||||||||||||||||||    
T  722 ctctatcttaatgtacagaaaaattcaagtttcaacattcccaaattcattttccaaagccttacacaa-cactcattttccaaaacggttaacaaatga 624  T
Q  204 attttcaaacgaaactcccgttttctcccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaacc 303  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||     ||||||||| ||||||||||||||||| ||||||||         
T  623 attttcaaacgaaactcccgttttctcccaaaacgactcgactatcaaaactac----aacataaaaacagaaattccatcaagttaaactcatc----- 533  T
Q  304 acataggcaactcaatcaacaactttgtatatcaaatttcattttggtgcttcacatgaccatctagcacaattttaccaatacaaacaacnnnnnnnnn 403  Q
           |||||||||||||||||||||||||||| ||||| |||||| ||||| |||||||||||||| || || |||||||||||||||             
T  532 -------caactcaatcaacaactttgtatatcaagtttcactttggtccttcatatgaccatctagcaaaacttcaccaatacaaacaacttat----- 445  T
Q  404 cttcataaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaaca 503  Q
     ||||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||           ||||||||||||    
T  444 -ttcataaaatggaatactcatgttatcattcaacaacaacaacatatctacttcaacaacacttcatttggacatg-----------aattcaacaaca 357  T
Q  504 caatatccaaatccaacaattgagtaaaactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgc 603  Q
    |||||||  ||||||||||||||| ||||| ||||||||  | |||||     |||||||||||||| ||||||||||||||  ||||||||||||||||    
T  356 caatatcacaatccaacaattgagcaaaacacataagtatccattttc-----accaacaacaacaacttatttcacaacaa-taaattatgaatcatgc 263  T
Q  604 atacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  262 atactcaagccatgaattagcatccataacatcacttaacaacaacaacatttattg 206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 19 - 660
Target Start/End: Complemental strand, 10773 - 10144
Alignment:
Q  19 tttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataatgc 118  Q
    ||||||| || ||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||| || || | ||| |||||  |||| |||||     
T  10773 tttcaacctccacgtttttgcgcataaaaatcaaaccgttaatccgtttttgatgccgttttcacctacttgttcatgacacttagccctatcttaatgt 10674  T
Q  119 acagaaaaatcccagtttcaacaacctcaaattcattttacaa-gcctcacacaaacactcattttccaaaacggttaacaaatgaattttcaaacgaaa 217  Q
     ||||||||  | ||||||||||  |  ||||||||||| ||| |||| |||||| ||||||||||||||||| |||||||| ||||||||||  |||||    
T  10673 gcagaaaaagtcaagtttcaacattcctaaattcattttccaaagccttacacaa-cactcattttccaaaactgttaacaa-tgaattttcacccgaaa 10576  T
Q  218 ctcccgttttctcccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaaccacataggcaactca 317  Q
    ||||| |||| || |||| ||||||||||| || ||| ||||||||    |||| |||||||||| | |||||| | |||||||| |||||| |||||||    
T  10575 ctcccattttttctcaaa-cgactcgactaacacaactacgacata----aaaacagaaattccaacgagtttagcccatccaactacatagacaactca 10481  T
Q  318 atcaacaactttgtatatcaaatttcattttgg-tgcttcacatgaccatctagcacaattttaccaatacaaacaacnnnnnnnnncttcataaaatgg 416  Q
     ||||||||||||||| |||||||||| || || | |||||||| | |||||||||||| || |||||||||||||||          ||||| ||||||    
T  10480 gtcaacaactttgtatttcaaatttcacttggggttcttcacataaacatctagcacaacttaaccaatacaaacaacttat------ttcatcaaatgg 10387  T
Q  417 aatatccatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacacaatatccaaatc 516  Q
    ||||  |||||||||||||   |||||||||||||||||||||||| ||||||| ||| |||||||||||||| ||||||||||||||||||||  ||||    
T  10386 aatactcatgatatcattccgtaacaacaacatatctacttcaacagcacttcaattatacatgaattcaaccgtaattcaacaacacaatatctcaatc 10287  T
Q  517 caacaattgagtaaaactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccat 616  Q
     |||||||||| ||||| ||||| ||  |  |||||| |||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  10286 taacaattgagcaaaacacataaatatccactttcaccaaaccatcaacaacaacttatttcacaacaac-aaattatgaatcatgcatacccaagccat 10188  T
Q  617 gaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    ||||||||||||||||||||||||||||||||||||||| ||||    
T  10187 gaattagcatccataacatcacttaacaacaacaacatccattg 10144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 251; Significance: 1e-139; HSPs: 2)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 6 - 660
Target Start/End: Original strand, 5373 - 6017
Alignment:
Q  6 gacatcatcagatttt-caacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattag 104  Q
    |||| ||||||||||| ||| ||  ||||||||||||||||||| ||||||||||| | |||||| ||||||||||  |||||||| |||| ||| ||||    
T  5373 gacaacatcagatttttcaattttcacgttttcgcgcataaaaaccaaaccgttaacccgttttcaatgccgtttttgcctacatgttcctgacacttag 5472  T
Q  105 cagtatcataatgcacagaaaaatcccagtttcaacaacctcaaattcattttac-aagcctcacacaaacactca-ttttccaaaacggttaacaaatg 202  Q
    |  ||||  || | |||||||||| |||| |||||||||| |||||||||||| | |||||| ||||||||||||| |||||||||||||||||||| ||    
T  5473 ctctatctaaaagtacagaaaaattccag-ttcaacaaccccaaattcattttccaaagccttacacaaacactcatttttccaaaacggttaacaattg 5571  T
Q  203 aattttcaaacgaaactcccgttttctcccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaac 302  Q
    ||||||||  ||||||||| | |||||||| ||||||||||||||||| ||| ||     ||||||||| ||||||||||||||| ||||||||||||||    
T  5572 aattttcacccgaaactcctgatttctccc-aaacgactcgactatcacaactac----aacataaaaacagaaattccatcaagcttaactcatccaac 5666  T
Q  303 cacataggcaactcaatcaacaactttgtatatcaaatttcatttt-ggtgcttcacatgaccatctagcacaattttaccaatacaaacaacnnnnnnn 401  Q
    ||| | | ||||||| |||||||||||||||||||||||||||||| ||| |||||||||| ||| |||||||| || |||||||||||||||           
T  5667 cacctcgacaactcagtcaacaactttgtatatcaaatttcattttgggtccttcacatgaacatttagcacaacttcaccaatacaaacaac------- 5759  T
Q  402 nncttcataaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaa 501  Q
      |||||||||| |||||| ||||| ||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||    
T  5760 aacttcataaaagggaatacccatggtataattcaacaacaacaacatatctaattcaacaacacttcattaagacatgaaatcaaccataattcaacaa 5859  T
Q  502 cacaatatccaaatccaacaa-ttgagtaaaactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatca 600  Q
    |||||||||  |||||||||| |||||  |||||||||||||| | ||||||| |||||||||||||||| |||||||||| || | |||| ||| || |    
T  5860 cacaatatctcaatccaacaatttgag-caaactcataagtacccattttcaccaaaccaacaacaacaacttatttcacatcatc-aaatcatggatta 5957  T
Q  601 tgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    || | || |||||||||||| | || | | || |||||||| ||||||||||||| ||||    
T  5958 tgaacactcaagccatgaatcatcaacaacaatatcacttagcaacaacaacatcaattg 6017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342; HSP #2
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 549 - 617
Target Start/End: Complemental strand, 739 - 672
Alignment:
Q  549 ttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatg 617  Q
    ||||| |||||| |||||| |||  ||||| |||||||||| |||| ||||||||| ||||||||||||    
T  739 ttcacaaaaccaccaacaataatccatttctcaacaacaaa-ttattaatcatgcaaacccaagccatg 672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 246; Significance: 1e-136; HSPs: 2)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 30 - 660
Target Start/End: Original strand, 4024 - 4640
Alignment:
Q  30 acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataatgcacagaaaaatc 129  Q
    |||||||||||| |||||| ||||||||||| | |||||||||||||||||| |||||| |||| | ||| |||||  |||| ||||| ||||||||||     
T  4024 acgttttcgcgcgtaaaaaccaaaccgttaacccgttttcgatgccgttttcgcctacacgctcttgacacttagccctatcttaatgtacagaaaaatt 4123  T
Q  130 ccagtttcaacaacctcaaattcattttac-aagcctcacacaaacactca-ttttccaaaacggttaacaaatgaattttcaaacgaaactcccgtttt 227  Q
    | ||||||||||  | |||||||||||| | ||||||  ||||||| |||| ||||||||||| |||||||| ||||||||||  | ||||||||| |||    
T  4124 caagtttcaacattcccaaattcattttccaaagcctttcacaaacgctcatttttccaaaacagttaacaattgaattttcacccaaaactcccgattt 4223  T
Q  228 ctcccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaaccacataggcaactcaatcaacaact 327  Q
    ||||| ||||||||||||||||| ||| ||     ||||||||| ||||||| ||||||||||||||||||||||||||| |  |||||| |||||||||    
T  4224 ctccc-aaacgactcgactatcacaactac----aacataaaaacagaaattacatcaagtttaactcatccaaccacatcgataactcagtcaacaact 4318  T
Q  328 ttgtatatcaaatttcatttt-ggtgcttcacatgaccatctagcacaattttaccaatacaaacaacnnnnnnnnncttcataaaatggaatatccatg 426  Q
    ||||||||||||||||||||| ||| |||||||||| |||||||||||| || |||||||||||||||         ||||||||||||||||| |||||    
T  4319 ttgtatatcaaatttcattttgggtccttcacatgaacatctagcacaacttcaccaatacaaacaac-------aacttcataaaatggaatacccatg 4411  T
Q  427 atatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacacaatatccaaatccaacaa-ttg 525  Q
     ||| ||||||||||||||||||||||| |||||||||||     || ||||||||||||||||||||||||||||||||||||| |||||||||| |||    
T  4412 gtataattcaacaacaacaacatatctaattcaacaacac-----tttgacatgaattcaaccataattcaacaacacaatatcccaatccaacaatttg 4506  T
Q  526 agtaaaactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagca 625  Q
    || |||||||||||||||   ||||||| |||||||||||||||| |||||||||| || | |||| ||| || ||| | ||||||||||||||| | ||    
T  4507 agcaaaactcataagtaccaattttcaccaaaccaacaacaacaacttatttcacatcatc-aaatcatggattatgaacacccaagccatgaatcatca 4605  T
Q  626 tccataacatcacttaacaacaacaacatctattg 660  Q
     | | || |||||||| ||||||||||||| ||||    
T  4606 acaacaatatcacttagcaacaacaacatcaattg 4640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #2
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 30 - 660
Target Start/End: Original strand, 8638 - 9254
Alignment:
Q  30 acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataatgcacagaaaaatc 129  Q
    |||||||||||| |||||| ||||||||||| | |||||||||||||||||| |||||| |||| | ||| |||||  |||| ||||| ||||||||||     
T  8638 acgttttcgcgcgtaaaaaccaaaccgttaacccgttttcgatgccgttttcgcctacacgctcttgacacttagccctatcttaatgtacagaaaaatt 8737  T
Q  130 ccagtttcaacaacctcaaattcattttac-aagcctcacacaaacactca-ttttccaaaacggttaacaaatgaattttcaaacgaaactcccgtttt 227  Q
    | ||||||||||  | |||||||||||| | ||||||  ||||||| |||| ||||||||||| |||||||| ||||||||||  | ||||||||| |||    
T  8738 caagtttcaacattcccaaattcattttccaaagcctttcacaaacgctcatttttccaaaacagttaacaattgaattttcacccaaaactcccgattt 8837  T
Q  228 ctcccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaaccacataggcaactcaatcaacaact 327  Q
    ||||| ||||||||||||||||| ||| ||     ||||||||| ||||||| ||||||||||||||||||||||||||| |  |||||| |||||||||    
T  8838 ctccc-aaacgactcgactatcacaactac----aacataaaaacagaaattacatcaagtttaactcatccaaccacatcgataactcagtcaacaact 8932  T
Q  328 ttgtatatcaaatttcatttt-ggtgcttcacatgaccatctagcacaattttaccaatacaaacaacnnnnnnnnncttcataaaatggaatatccatg 426  Q
    ||||||||||||||||||||| ||| |||||||||| |||||||||||| || |||||||||||||||         ||||||||||||||||| |||||    
T  8933 ttgtatatcaaatttcattttgggtccttcacatgaacatctagcacaacttcaccaatacaaacaac-------aacttcataaaatggaatacccatg 9025  T
Q  427 atatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacacaatatccaaatccaacaa-ttg 525  Q
     ||| ||||||||||||||||||||||| |||||||||||     || ||||||||||||||||||||||||||||||||||||| |||||||||| |||    
T  9026 gtataattcaacaacaacaacatatctaattcaacaacac-----tttgacatgaattcaaccataattcaacaacacaatatcccaatccaacaatttg 9120  T
Q  526 agtaaaactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagca 625  Q
    || |||||||||||||||   ||||||| |||||||||||||||| |||||||||| || | |||| ||| || ||| | ||||||||||||||| | ||    
T  9121 agcaaaactcataagtaccaattttcaccaaaccaacaacaacaacttatttcacatcatc-aaatcatggattatgaacacccaagccatgaatcatca 9219  T
Q  626 tccataacatcacttaacaacaacaacatctattg 660  Q
     | | || |||||||| ||||||||||||| ||||    
T  9220 acaacaatatcacttagcaacaacaacatcaattg 9254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 245; Significance: 1e-135; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 245; E-Value: 1e-135
Query Start/End: Original strand, 30 - 655
Target Start/End: Original strand, 6632 - 7243
Alignment:
Q  30 acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataatgcacagaaaaatc 129  Q
    |||||||||||| |||||| ||||||||||| | |||||||||||||||||| |||||| |||| | ||| |||||  |||| ||||| ||||||||||     
T  6632 acgttttcgcgcgtaaaaaccaaaccgttaacccgttttcgatgccgttttcgcctacacgctcttgacacttagccctatcttaatgtacagaaaaatt 6731  T
Q  130 ccagtttcaacaacctcaaattcattttac-aagcctcacacaaacactca-ttttccaaaacggttaacaaatgaattttcaaacgaaactcccgtttt 227  Q
    | ||||||||||  | |||||||||||| | ||||||  ||||||| |||| ||||||||||| |||||||| ||||||||||  | ||||||||| |||    
T  6732 caagtttcaacattcccaaattcattttccaaagcctttcacaaacgctcatttttccaaaacagttaacaattgaattttcacccaaaactcccgattt 6831  T
Q  228 ctcccaaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaaccacataggcaactcaatcaacaact 327  Q
    ||||| ||||||||||||||||| ||| ||     ||||||||| ||||||| ||||||||||||||||||||||||||| |  |||||| |||||||||    
T  6832 ctccc-aaacgactcgactatcacaactac----aacataaaaacagaaattacatcaagtttaactcatccaaccacatcgataactcagtcaacaact 6926  T
Q  328 ttgtatatcaaatttcatttt-ggtgcttcacatgaccatctagcacaattttaccaatacaaacaacnnnnnnnnncttcataaaatggaatatccatg 426  Q
    ||||||||||||||||||||| ||| |||||||||| |||||||||||| || |||||||||||||||         ||||||||||||||||| |||||    
T  6927 ttgtatatcaaatttcattttgggtccttcacatgaacatctagcacaacttcaccaatacaaacaac-------aacttcataaaatggaatacccatg 7019  T
Q  427 atatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacacaatatccaaatccaacaa-ttg 525  Q
     ||| ||||||||||||||||||||||| |||||||||||     || ||||||||||||||||||||||||||||||||||||| |||||||||| |||    
T  7020 gtataattcaacaacaacaacatatctaattcaacaacac-----tttgacatgaattcaaccataattcaacaacacaatatcccaatccaacaatttg 7114  T
Q  526 agtaaaactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagca 625  Q
    || |||||||||||||||   ||||||| |||||||||||||||| |||||||||| || | |||| ||| || ||| | ||||||||||||||| | ||    
T  7115 agcaaaactcataagtaccaattttcaccaaaccaacaacaacaacttatttcacatcatc-aaatcatggattatgaacacccaagccatgaatcatca 7213  T
Q  626 tccataacatcacttaacaacaacaacatc 655  Q
     | | || |||||||| |||||||||||||    
T  7214 acaacaatatcacttagcaacaacaacatc 7243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 182; Significance: 5e-98; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 182; E-Value: 5e-98
Query Start/End: Original strand, 404 - 653
Target Start/End: Complemental strand, 15899 - 15651
Alignment:
Q  404 cttcataaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaaca 503  Q
    ||||| ||||||||||| |||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||     
T  15899 cttcacaaaatggaatacccatgataccattcaacaataacaacatatctaattcaacaacacttcatttagacatgaattcaaccataattcaacaact 15800  T
Q  504 caatatccaaatccaacaattgagtaaaactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgc 603  Q
    |||||||| ||||||||||||||| ||||||||||||||| | ||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||    
T  15799 caatatcccaatccaacaattgagcaaaactcataagtacccattttcaccaaaccaacaacaacaatttatttctcaacaa-aaaattatgaatcatgc 15701  T
Q  604 atacccaagccatgaattagcatccataacatcacttaacaacaacaaca 653  Q
    |||||||||||||||||||||||| ||||||| ||| |||||||||||||    
T  15700 atacccaagccatgaattagcatctataacatgactaaacaacaacaaca 15651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 169; Significance: 3e-90; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 135 - 620
Target Start/End: Original strand, 147095 - 147590
Alignment:
Q  135 ttcaacaacctcaaattcattttac--aagcctcacacaaacactcatttt-ccaaaacggttaacaaatgaattttcaaacgaaactcccgttttctcc 231  Q
    |||||||||| |||||| ||||| |  |||||| ||||||||||||||||| |||||||||||||||| ||||||||||  |  |||| ||| |||||||    
T  147095 ttcaacaaccccaaattaatttttccaaagccttacacaaacactcatttttccaaaacggttaacaattgaattttcacccataacttccgatttctcc 147194  T
Q  232 caaaacgactcgactatcataaccacgacatacataaaaatagaaattccatcaagtttaactcatccaaccacataggcaactcaatcaacaactttgt 331  Q
    |||| ||||||||| |||| ||| || |||||    |||| ||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||     
T  147195 caaa-cgactcgacgatcacaactacaacata----aaaacagaaattccatcaagtttaactcatccaaccacatcgacaactcagtcaacaactttgc 147289  T
Q  332 atatcaaatttcattttgg-tgcttcacatgaccatctagcacaattttaccaatacaaacaa--------------cnnnnnnnnncttcataaaatgg 416  Q
    ||||||||||||||||||| | |||||||||| |||||||||||| || |||||||||| |||              |         |||||||||||||    
T  147290 atatcaaatttcattttgggtccttcacatgaacatctagcacaacttcaccaatacaagcaacaacctcaccaattcaaacaacaacttcataaaatgg 147389  T
Q  417 aatatccatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaacacaatatccaaatc 516  Q
    |||| ||||| ||| ||||||||||||||||||||||| ||||||||||||  |||||||| ||||||||||||||||||||||||||||||||| ||||    
T  147390 aatacccatggtataattcaacaacaacaacatatctaattcaacaacactcaatttagacttgaattcaaccataattcaacaacacaatatcccaatc 147489  T
Q  517 caacaa-ttgagtaaaactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagcca 615  Q
    |||||| || || ||||||||||||||| | ||||||| ||||||||||||||   |||||||||| || | |||| ||| || ||| | ||||||||||    
T  147490 caacaatttaagcaaaactcataagtacccattttcaccaaaccaacaacaac---ttatttcacatcatc-aaatcatggattatgaacacccaagcca 147585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 147003 - 147088
Alignment:
Q  6 gacatcatcagattttcaacttct-acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatg 90  Q
    |||| |||||||||||| | || | |||||||||| | |||||  |||| |||||| | |||||||||||||||||||||||||||    
T  147003 gacaacatcagattttccaattttcacgttttcgcacgtaaaatccaaatcgttaacccgttttcgatgccgttttcacctacatg 147088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 158; Significance: 1e-83; HSPs: 3)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 404 - 653
Target Start/End: Complemental strand, 19334 - 19086
Alignment:
Q  404 cttcataaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaaca 503  Q
    ||||| ||||||||||| | ||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  19334 cttcacaaaatggaatacctatgatatcattcaacgacaacaacatatctaattcaacaatacttcatttagacatgaattcaaccataattcaacaaca 19235  T
Q  504 caatatccaaatccaacaattgagtaaaactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgc 603  Q
    |||||||| ||| ||||||||||| |||||||||||||||   ||||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  19234 caatatcccaattcaacaattgagcaaaactcataagtacctattttcaccaaaccaacaacaacaatttatttctcaacaac-aaattatgaatcatgc 19136  T
Q  604 atacccaagccatgaattagcatccataacatcacttaacaacaacaaca 653  Q
    ||||||||||||||||||| |||| |  | || ||| |||||||||||||    
T  19135 atacccaagccatgaattatcatcaaccatatgactaaacaacaacaaca 19086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 547 - 653
Target Start/End: Complemental strand, 12810 - 12705
Alignment:
Q  547 ttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaac 646  Q
    ||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| |||| |  | || ||| ||||||    
T  12810 ttttcaccaaaccaacaacaacaatttatttctcaacaacaaa-ttatgaatcatgcatacccaagccatgaattatcatcaaccatatgactaaacaac 12712  T
Q  647 aacaaca 653  Q
    |||||||    
T  12711 aacaaca 12705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 95
Target Start/End: Complemental strand, 19696 - 19635
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcct 95  Q
    |||||||  ||||| |||||||||||||| | ||| |||||||||||| |||||| ||||||    
T  19696 tttcgcgtgtaaaattcaaaccgttaatcggattttgatgccgttttcgcctacacgctcct 19635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 151; Significance: 1e-79; HSPs: 4)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 404 - 653
Target Start/End: Original strand, 79683 - 79934
Alignment:
Q  404 cttcataaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaacacttcatttagacatgaattcaaccataattcaacaaca 503  Q
    ||||| ||||||||||| | |||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  79683 cttcacaaaatggaatacctatgatatcattcaacaacaataacatatctaattcaacaatacttcatttagacatgaattcaaccataattcaacaaca 79782  T
Q  504 caatatccaaatccaacaattgagtaaaactcataagtactccttttcactaaac---caacaacaacaatttatttcacaacaacaaaattatgaatca 600  Q
    |||||||| |||||||||| |||| ||||||||||||||| | ||||||| ||||   |||||||||||| ||||||||||||||| |||||||||||||    
T  79783 caatatcccaatccaacaagtgagcaaaactcataagtacccattttcaccaaaccaacaacaacaacaacttatttcacaacaac-aaattatgaatca 79881  T
Q  601 tgcatacccaagccatgaattagcatccataacatcacttaacaacaacaaca 653  Q
    |||||||||||||||||||||| |||| |  | || ||| |||||||||||||    
T  79882 tgcatacccaagccatgaattatcatcaaccatatgactaaacaacaacaaca 79934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 435 - 660
Target Start/End: Original strand, 46016 - 46242
Alignment:
Q  435 caacaacaacaacatatctacttcaacaaca-cttcatttagacatgaattcaaccataattcaacaacacaatatccaaatccaacaatt-gagtaaaa 532  Q
    |||||||||||||||||||| |||||||||| | ||| ||  |||||||||||||||||||||||||||||| |||   |||||||||||| ||| ||||    
T  46016 caacaacaacaacatatctaattcaacaacaacctcaattgaacatgaattcaaccataattcaacaacacagtatttcaatccaacaatttgagcaaaa 46115  T
Q  533 ctcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataa 632  Q
    ||||||||||| | ||||||| |||||||||||||||| ||||||||||  | | |||| |||||| ||| | ||||||||||||||| | || | | ||    
T  46116 ctcataagtacccattttcaccaaaccaacaacaacaacttatttcacattatc-aaatcatgaattatgaacacccaagccatgaatcatcaacaacaa 46214  T
Q  633 catcacttaacaacaacaacatctattg 660  Q
     ||||||||  |||||||||||| ||||    
T  46215 tatcacttagaaacaacaacatccattg 46242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 476 - 660
Target Start/End: Original strand, 40552 - 40735
Alignment:
Q  476 acatgaattcaaccataattcaacaacacaatatccaaatccaacaa-ttgagtaaaactcataagtactccttttcactaaaccaacaacaacaattta 574  Q
    ||||||||| |||||||||||||||||||| ||| | |||||||||| ||||| ||||||| | | ||| | ||||||| |||||||||||||||  |||    
T  40552 acatgaattgaaccataattcaacaacacagtattccaatccaacaatttgagcaaaactcttga-tacccattttcaccaaaccaacaacaacagctta 40650  T
Q  575 tttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    ||||| ||  |  |||| |||||| ||| | ||||||||||||||| | || | | || |||||||| ||||||||||||| ||||    
T  40651 tttca-aattatcaaatcatgaattatgaacacccaagccatgaatcatcaacaacaatatcacttagcaacaacaacatccattg 40735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 99
Target Start/End: Original strand, 79321 - 79386
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaaca 99  Q
    |||||||| ||||| |||||| ||||||| | ||| |||||||||||| |||||| ||||||||||    
T  79321 tttcgcgcgtaaaattcaaactgttaatccgattttgatgccgttttcgcctacacgctcctaaca 79386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 96; Significance: 1e-46; HSPs: 3)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 6 - 157
Target Start/End: Original strand, 76793 - 76944
Alignment:
Q  6 gacatcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagc 105  Q
    |||| ||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||| |||||    
T  76793 gacaacatcagattttcaaccttcacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgttcttgacacttagc 76892  T
Q  106 agtatcataatgcacagaaaaatcccagtttcaacaacctcaaattcatttt 157  Q
      |||||||||| |||||||||| | ||||||||||||| ||||||||||||    
T  76893 cctatcataatgtacagaaaaattcaagtttcaacaaccccaaattcatttt 76944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 404 - 499
Target Start/End: Complemental strand, 20382 - 20286
Alignment:
Q  404 cttcataaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaac-acttcatttagacatgaattcaaccataattcaac 499  Q
    ||||| |||||||||||  |||| ||| ||||| |||||||||||||| || ||||||||| |||||||||||||||||||| ||||| ||||||||    
T  20382 cttcacaaaatggaatactcatggtataattcagcaacaacaacatatataattcaacaacaacttcatttagacatgaattgaaccacaattcaac 20286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 177 - 302
Target Start/End: Original strand, 76938 - 77058
Alignment:
Q  177 tcattttccaaaacggttaacaaatgaattttcaaacgaaactcccgttttctcccaaaacgactcgactatcataaccacgacatacataaaaatagaa 276  Q
    ||||||||||||| | ||||||| |||||||||| |||||||||||||||||| || |||| ||| |||||||| ||||||     ||||||||| | ||    
T  76938 tcattttccaaaatgtttaacaattgaattttcacacgaaactcccgttttcttcc-aaacaactagactatcacaaccac----aacataaaaacataa 77032  T
Q  277 attccatcaagtttaactcatccaac 302  Q
    |||| | ||||||||||||| |||||    
T  77033 attctaccaagtttaactcacccaac 77058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 81; Significance: 9e-38; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 404 - 660
Target Start/End: Original strand, 33485 - 33739
Alignment:
Q  404 cttcataaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaaca-cttcatttagacatgaattcaaccataattcaacaac 502  Q
    ||||| ||||||||||| ||||  ||  | ||||||||||||||||||||| || ||||||| ||||| ||  |||||||||||||||||||||||||||    
T  33485 cttcacaaaatggaatacccattgtacaaatcaacaacaacaacatatctaatttaacaacaacttcaattgaacatgaattcaaccataattcaacaac 33584  T
Q  503 acaatatccaaatccaacaa-ttgagtaaaactcataagtactccttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcat 601  Q
    ||||||||  |||||||||| ||||| |||| |||||||||| | ||||||| ||||||||||||||   ||||||||||  | | |||| |||||| ||    
T  33585 acaatatctcaatccaacaatttgagcaaaattcataagtacccattttcaccaaaccaacaacaac---ttatttcacattatc-aaatcatgaattat 33680  T
Q  602 gcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    | | |||| |||||||||| | || | | || |||||||| ||||||||||||| ||||    
T  33681 gaacaccctagccatgaatcatcaacaacaatatcacttagcaacaacaacatcaattg 33739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 73; Significance: 5e-33; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 6819 - 6675
Alignment:
Q  11 catcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtat 110  Q
    |||||||||||| || |  | |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| |||| ||| ||||||  ||    
T  6819 catcagattttctaccttcatgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgtcgttttcaactacatgttcctgacacttagcatcat 6720  T
Q  111 cataatgcacagaaaaatcccagtttcaacaacctcaaattcatt 155  Q
    |||| |  |||||||||| | ||||||||||||| ||||||||||    
T  6719 catattctacagaaaaattcaagtttcaacaaccacaaattcatt 6675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2046 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold2046
Description:

Target: scaffold2046; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 11 - 140
Target Start/End: Original strand, 801 - 929
Alignment:
Q  11 catcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtat 110  Q
    ||||||||||||||| |  ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||| |||||  |||    
T  801 catcagattttcaaccttcacgttttcgcgcataaaaatcaaactgttaatctgttttcgatgcc-ttttcacctacatgctcctgacacttagccctat 899  T
Q  111 cataatgcacagaaaaatcccagtttcaac 140  Q
    ||||||  ||||||| || | |||||||||    
T  900 cataatctacagaaagattcaagtttcaac 929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0521 (Bit Score: 70; Significance: 3e-31; HSPs: 2)
Name: scaffold0521
Description:

Target: scaffold0521; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 458 - 578
Target Start/End: Original strand, 10970 - 11090
Alignment:
Q  458 caacaacacttcatttagacatgaattcaaccataattcaacaacacaatatccaaatccaacaa-ttgagtaaaactcataagtactccttttcactaa 556  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| ||| ||||| |||||||| |||||| | |||| || ||    
T  10970 caacaacacttcatttagacatgaattcaaccataattcaacaacacaatatcacaatccatcaatttgagcaaaactcacaagtacccatttttac-aa 11068  T
Q  557 accaacaacaacaatttatttc 578  Q
    |||||||||||||| |||||||    
T  11069 accaacaacaacaacttatttc 11090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0521; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 8388 - 8441
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctac 87  Q
    |||||||| ||||| |||||||||||| |||||||  ||||||||||| |||||    
T  8388 tttcgcgcgtaaaattcaaaccgttaacctgttttaaatgccgttttcgcctac 8441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 6 - 149
Target Start/End: Original strand, 3721 - 3864
Alignment:
Q  6 gacatcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagc 105  Q
    |||| ||||||||||||||| |  | ||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||| |||| ||| |||||    
T  3721 gacaacatcagattttcaaccttcatgttttcgcgcataaaaatcaatccgttaatgtgttttcgatgccgttttcgcctacatggtcctgacacttagc 3820  T
Q  106 agtatcataatgcacagaaaaatcccagtttcaacaacctcaaa 149  Q
      |||||||||  ||||||| || | ||||||||| ||| ||||    
T  3821 cctatcataatctacagaaagattcaagtttcaaccaccccaaa 3864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0377 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0377
Description:

Target: scaffold0377; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 13 - 140
Target Start/End: Complemental strand, 16540 - 16413
Alignment:
Q  13 tcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatca 112  Q
    ||||||||||||| |  ||||||||||||||||||| ||||||||||||| ||||||||| |||||||| |||||| |||||| ||| |||||  |||||    
T  16540 tcagattttcaaccttcacgttttcgcgcataaaaaccaaaccgttaatccgttttcgataccgttttcgcctacacgctcctgacacttagctctatca 16441  T
Q  113 taatgcacagaaaaatcccagtttcaac 140  Q
    ||||  |||||||||| | |||||||||    
T  16440 taatctacagaaaaattcaagtttcaac 16413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 63; Significance: 5e-27; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 6 - 140
Target Start/End: Complemental strand, 25964 - 25830
Alignment:
Q  6 gacatcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagc 105  Q
    |||| |||||||||| |||| |  ||||||||||||||||||| ||||||||||| | |||||||||||||||||| |||||| |||||| ||| |||||    
T  25964 gacaacatcagatttccaaccttcacgttttcgcgcataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctacacgctcctgacacttagc 25865  T
Q  106 agtatcataatgcacagaaaaatcccagtttcaac 140  Q
      |||||||||  |||||||||| | |||||||||    
T  25864 tctatcataatctacagaaaaattcaagtttcaac 25830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0429 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: scaffold0429
Description:

Target: scaffold0429; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 6 - 145
Target Start/End: Complemental strand, 2443 - 2304
Alignment:
Q  6 gacatcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagc 105  Q
    |||| |||||||||| |||| |  |||||||| |||||||||| ||||||||||| | |||||||||||||||||| ||||||||||||| ||| |||||    
T  2443 gacaacatcagatttccaaccttcacgttttctcgcataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctacatgctccttacacttagc 2344  T
Q  106 agtatcataatgcacagaaaaatcccagtttcaacaacct 145  Q
      |||||||||  | |||||||| | ||||||||| ||||    
T  2343 tctatcataatctatagaaaaattcaagtttcaaccacct 2304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 574 - 660
Target Start/End: Original strand, 7826 - 7911
Alignment:
Q  574 atttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    ||||| |||||||||| | |||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||| ||||    
T  7826 atttctcaacaacaaa-tcatgaatcatgcatacccaagccatgaattaacatccacaacatcacttagcaacaacaacatcaattg 7911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0720 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 13 - 140
Target Start/End: Complemental strand, 880 - 753
Alignment:
Q  13 tcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatca 112  Q
    ||||||||||||| |  |||||||||| |||||||||||||||||||| | |||||||||| ||||||| |||| | |||||| ||| |||||  |||||    
T  880 tcagattttcaaccttcacgttttcgcacataaaaatcaaaccgttaacccgttttcgatgtcgttttcgcctaaacgctcctgacacttagctctatca 781  T
Q  113 taatgcacagaaaaatcccagtttcaac 140  Q
    ||||  | |||||||| | |||||||||    
T  780 taatctatagaaaaattcaagtttcaac 753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 13 - 116
Target Start/End: Complemental strand, 17686 - 17584
Alignment:
Q  13 tcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatca 112  Q
    ||||||||||||| |  |||||||||  |||||||||||||||||||| | |||||||||||||||||| |||||| ||||||||| ||||||  |||||    
T  17686 tcagattttcaaccttcacgttttcgaacataaaaatcaaaccgttaacccgttttcgatgccgttttcgcctacacgctcctaac-attagccctatca 17588  T
Q  113 taat 116  Q
    ||||    
T  17587 taat 17584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 13 - 140
Target Start/End: Complemental strand, 35979 - 35852
Alignment:
Q  13 tcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatca 112  Q
    |||||||||||||    ||||||||||||||||||| ||||||||||| | |||||||||||||||||| |||||| |||||| ||| ||| |  |||||    
T  35979 tcagattttcaacaatcacgttttcgcgcataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctacacgctcctgacacttatctctatca 35880  T
Q  113 taatgcacagaaaaatcccagtttcaac 140  Q
    ||||  ||||||| || | |||||||||    
T  35879 taatctacagaaatattcaagtttcaac 35852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 13 - 116
Target Start/End: Complemental strand, 40650 - 40547
Alignment:
Q  13 tcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatca 112  Q
    ||||||||||||| |  |||||||||| |||||||||||||||||||| | |||||||||||||||||| |||| | |||||| ||| |||||  |||||    
T  40650 tcagattttcaaccttcacgttttcgcacataaaaatcaaaccgttaacccgttttcgatgccgttttcgcctaaacgctcctgacacttagctctatca 40551  T
Q  113 taat 116  Q
    ||||    
T  40550 taat 40547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 52; Significance: 2e-20; HSPs: 2)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 13 - 140
Target Start/End: Original strand, 3505 - 3632
Alignment:
Q  13 tcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatca 112  Q
    ||||||||| ||| |  |||||||||| |||||||||||||||||||| |  ||||||||||||||||| |||| | |||||| ||| |||||  |||||    
T  3505 tcagattttaaaccttcacgttttcgcacataaaaatcaaaccgttaacccattttcgatgccgttttcgcctaaacgctcctgacacttagctctatca 3604  T
Q  113 taatgcacagaaaaatcccagtttcaac 140  Q
    ||||  |||||||||| | |||||||||    
T  3605 taatctacagaaaaattcaagtttcaac 3632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 34 - 88
Target Start/End: Original strand, 30926 - 30980
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctaca 88  Q
    |||||||| |||||  ||||||||||||| | ||| |||||||||||||||||||    
T  30926 tttcgcgcgtaaaatgcaaaccgttaatcggattttgatgccgttttcacctaca 30980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 52; Significance: 2e-20; HSPs: 3)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 952 - 837
Alignment:
Q  13 tcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatca 112  Q
    ||||||||||||| |  ||||||||| ||||||||| ||||||||||| | |||||||||||||||||| ||||||  ||||| ||| |||||  |||||    
T  952 tcagattttcaaccttcacgttttcgtgcataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctacacactcctgacacttagctctatca 853  T
Q  113 taatgcacagaaaaat 128  Q
    ||||  ||||||||||    
T  852 taatctacagaaaaat 837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 7702 - 7587
Alignment:
Q  13 tcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatca 112  Q
    ||||||||||||| |  ||||||||| ||||||||| ||||||||||| | |||||||||||||||||| ||||||  ||||| ||| |||||  |||||    
T  7702 tcagattttcaaccttcacgttttcgtgcataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctacacactcctgacacttagctctatca 7603  T
Q  113 taatgcacagaaaaat 128  Q
    ||||  ||||||||||    
T  7602 taatctacagaaaaat 7587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 125
Target Start/End: Original strand, 26374 - 26465
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataatgcacagaaa 125  Q
    |||||||| ||||| ||||||||||||||   ||| |||||||||||| |||||| |||||| ||| ||| |  |||||||||  |||||||    
T  26374 tttcgcgcgtaaaattcaaaccgttaatcgaattttgatgccgttttcgcctacacgctcctgacacttaactctatcataatctacagaaa 26465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0962 (Bit Score: 51; Significance: 7e-20; HSPs: 1)
Name: scaffold0962
Description:

Target: scaffold0962; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 30 - 140
Target Start/End: Complemental strand, 1035 - 925
Alignment:
Q  30 acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataatgcacagaaaaatc 129  Q
    ||||||||||| ||||||| ||||||||||| | |||||||||||||||||| ||||||  ||||| ||| |||||  |||||||||  ||||||||||     
T  1035 acgttttcgcgaataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctacacactcctgacacttagctctatcataatctacagaaaaatt 936  T
Q  130 ccagtttcaac 140  Q
    | |||||||||    
T  935 caagtttcaac 925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 51; Significance: 7e-20; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 574 - 660
Target Start/End: Original strand, 3311 - 3396
Alignment:
Q  574 atttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    ||||| |||||||||| | |||||||||||||||||||||||||||||| |||||| ||||||||||| ||||| ||||||| ||||    
T  3311 atttctcaacaacaaa-tcatgaatcatgcatacccaagccatgaattaacatccacaacatcacttagcaacatcaacatcaattg 3396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 51; Significance: 7e-20; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 6 - 140
Target Start/End: Original strand, 72262 - 72396
Alignment:
Q  6 gacatcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagc 105  Q
    |||| ||||||||||||| | |  |||||||||||| |||||||||||||||||| | |||||||||||| ||||| |||||  |||||| ||| |||||    
T  72262 gacagcatcagattttcacccttcacgttttcgcgcctaaaaatcaaaccgttaacccgttttcgatgccattttcgcctacgcgctcctgacacttagc 72361  T
Q  106 agtatcataatgcacagaaaaatcccagtttcaac 140  Q
      ||||| |||  |||||||||| || ||||||||    
T  72362 tctatcacaatctacagaaaaattcctgtttcaac 72396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 593 - 660
Target Start/End: Original strand, 22701 - 22768
Alignment:
Q  593 atgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||||||||||| ||||||||||||||||| |||| | ||||| ||  ||||||||||||||| ||||    
T  22701 atgaatcatgcaaacccaagccatgaattatcatcaacaacatgacaaaacaacaacaacatcaattg 22768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 5489 - 5578
Alignment:
Q  6 gacatcatcagattttc-aacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcct 95  Q
    |||| |||||||||||| |||||| ||||||||| ||||||||| ||||||||||| | ||||||||||||||||||  ||||||||||||    
T  5489 gacaacatcagattttcgaacttc-acgttttcgagcataaaaaccaaaccgttaacccgttttcgatgccgttttcgtctacatgctcct 5578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 47; Significance: 2e-17; HSPs: 2)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 574 - 660
Target Start/End: Complemental strand, 9137 - 9052
Alignment:
Q  574 atttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    ||||| |||||||||| | |||||||||||||||| ||||||||||||| |||| | ||||||||||| ||||||||||||| ||||    
T  9137 atttctcaacaacaaa-tcatgaatcatgcatacctaagccatgaattatcatcaacaacatcacttagcaacaacaacatcaattg 9052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 547 - 660
Target Start/End: Complemental strand, 5528 - 5416
Alignment:
Q  547 ttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaac 646  Q
    ||||||| ||| || ||||||||  | ||||| ||||||||||   |||||||||||| |||||| |||||||||| |||| | ||||| ||||| ||||    
T  5528 ttttcaccaaaacaccaacaacatctcatttctcaacaacaaacc-atgaatcatgcaaacccaaaccatgaattatcatcaacaacatgacttagcaac 5430  T
Q  647 aacaacatctattg 660  Q
    ||||||||| ||||    
T  5429 aacaacatcaattg 5416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 46; Significance: 7e-17; HSPs: 2)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 8744 - 8833
Alignment:
Q  6 gacatcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcct 95  Q
    |||| |||||||||||| || |  ||||||||||||||||||| ||||||||||| | ||||||||||||||||||  ||||| ||||||    
T  8744 gacagcatcagattttcgaccttcacgttttcgcgcataaaaaccaaaccgttaacccgttttcgatgccgttttcgtctacacgctcct 8833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 81
Target Start/End: Original strand, 6592 - 6667
Alignment:
Q  6 gacatcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttc 81  Q
    |||| |||||||||||| || |  ||||||||||||||||||| ||||||||||| | ||||||||||||||||||    
T  6592 gacagcatcagattttcgaccttcacgttttcgcgcataaaaaccaaaccgttaacccgttttcgatgccgttttc 6667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 46; Significance: 7e-17; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 548 - 653
Target Start/End: Original strand, 30057 - 30161
Alignment:
Q  548 tttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaaca 647  Q
    |||||| |||||| ||||||||||  ||||| |||||||||| | |||||||||||| ||||||||||||||||| |||| | || || ||| |||||||    
T  30057 tttcacaaaaccaccaacaacaatccatttctcaacaacaaa-tcatgaatcatgcaaacccaagccatgaattatcatcaacaatatgactaaacaaca 30155  T
Q  648 acaaca 653  Q
    ||||||    
T  30156 acaaca 30161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 46; Significance: 7e-17; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 547 - 660
Target Start/End: Complemental strand, 109744 - 109632
Alignment:
Q  547 ttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaac 646  Q
    ||||||| |||||| ||||||||  | ||||| |||||||||| | ||||||||||||  |||||||||||||||| |||| | ||||| ||||| ||||    
T  109744 ttttcaccaaaccaccaacaacatctcatttctcaacaacaaa-tcatgaatcatgcaatcccaagccatgaattatcatcaacaacatgacttagcaac 109646  T
Q  647 aacaacatctattg 660  Q
    ||||||||| ||||    
T  109645 aacaacatcaattg 109632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 547 - 655
Target Start/End: Complemental strand, 118245 - 118138
Alignment:
Q  547 ttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaac 646  Q
    ||||||| |||||| ||||||||  | ||||| |||||||||| | ||||||||||||  |||||||||||||||| |||| | ||||| ||||| ||||    
T  118245 ttttcaccaaaccaccaacaacatctcatttctcaacaacaaa-tcatgaatcatgcaaccccaagccatgaattatcatcaacaacatgacttagcaac 118147  T
Q  647 aacaacatc 655  Q
    |||||||||    
T  118146 aacaacatc 118138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 547 - 655
Target Start/End: Original strand, 8952 - 9059
Alignment:
Q  547 ttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaac 646  Q
    ||||||| |||||| ||||||||  | ||||| |||||||||| | |||||||| ||| ||||||||||||||||| |||| | ||||| ||||| ||||    
T  8952 ttttcaccaaaccaccaacaacatctcatttctcaacaacaaa-tcatgaatcaagcaaacccaagccatgaattatcatcaacaacatgacttagcaac 9050  T
Q  647 aacaacatc 655  Q
    |||||||||    
T  9051 aacaacatc 9059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 588 - 655
Target Start/End: Original strand, 109595 - 109662
Alignment:
Q  588 aaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatc 655  Q
    |||| ||||||| |||||||||||||||||||||| |||| | ||||||||||| |||||||||||||    
T  109595 aaatcatgaatcgtgcatacccaagccatgaattatcatcaacaacatcacttagcaacaacaacatc 109662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 140
Target Start/End: Original strand, 117057 - 117167
Alignment:
Q  30 acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataatgcacagaaaaatc 129  Q
    ||||||| |||| |||||||||||||||||| | |||| |||||| |||||| |||||  |||||| |||  ||||  ||||| |||  ||||||||||     
T  117057 acgtttttgcgcctaaaaatcaaaccgttaacccgtttacgatgctgttttcgcctacgcgctcctgacacatagctctatcacaatctacagaaaaatt 117156  T
Q  130 ccagtttcaac 140  Q
    |||||||||||    
T  117157 ccagtttcaac 117167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 574 - 654
Target Start/End: Complemental strand, 112797 - 112721
Alignment:
Q  574 atttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacat 654  Q
    ||||| |||||||||| | |||||||||||| ||||||||||||||||   ||| | ||||| ||||||||||||||||||    
T  112797 atttctcaacaacaaa-tcatgaatcatgcaaacccaagccatgaatt---atcaacaacatgacttaacaacaacaacat 112721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 547 - 660
Target Start/End: Original strand, 159267 - 159376
Alignment:
Q  547 ttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaac 646  Q
    ||||||| |||||| ||||||||  | ||||| |||||||||| | |||||||||||||||||||||||  ||||| ||||   ||||||||||| ||||    
T  159267 ttttcaccaaaccaccaacaacatctcatttctcaacaacaaa-tcatgaatcatgcatacccaagccaaaaattatcatc---aacatcacttagcaac 159362  T
Q  647 aacaacatctattg 660  Q
    ||||||||| ||||    
T  159363 aacaacatcaattg 159376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 574 - 660
Target Start/End: Original strand, 85324 - 85409
Alignment:
Q  574 atttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    ||||| |||||||||| | |||||||||||| |||||| |||||||||| |||| | ||||| ||||| ||||||||||||| ||||    
T  85324 atttctcaacaacaaa-tcatgaatcatgcaaacccaaaccatgaattatcatcaacaacatgacttagcaacaacaacatcaattg 85409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1867 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold1867
Description:

Target: scaffold1867; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 555 - 660
Target Start/End: Original strand, 118 - 221
Alignment:
Q  555 aaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacat 654  Q
    |||||||||||||||| | ||||| || ||||||  | |||||||||||| ||||||||||||||||| |||| | ||||| || || ||||||||||||    
T  118 aaaccaacaacaacaactcatttctcagcaacaa--tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaacaacaacat 215  T
Q  655 ctattg 660  Q
    | ||||    
T  216 caattg 221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0833 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0833
Description:

Target: scaffold0833; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 555 - 660
Target Start/End: Original strand, 3273 - 3376
Alignment:
Q  555 aaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacat 654  Q
    |||||| ||||||||| | ||||| |||||||||  | |||||||||||| ||||||||||||||||| |||| | ||||| || || ||||||||||||    
T  3273 aaaccaccaacaacaactcatttctcaacaacaa--tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaacaacaacat 3370  T
Q  655 ctattg 660  Q
    | ||||    
T  3371 caattg 3376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 2)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 6 - 116
Target Start/End: Complemental strand, 1712 - 1602
Alignment:
Q  6 gacatcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagc 105  Q
    |||| ||||||||||||||| |  || |||||||||||||||  ||||||||||| | |||||||||||| ||||| |||||| |||||| | | |||||    
T  1712 gacaacatcagattttcaaccttcacattttcgcgcataaaacccaaaccgttaacccgttttcgatgccattttcgcctacacgctcctgagacttagc 1613  T
Q  106 agtatcataat 116  Q
      |||||||||    
T  1612 tctatcataat 1602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 116
Target Start/End: Original strand, 6908 - 6990
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataat 116  Q
    |||||||| ||||| |||||||||||| |  ||||||||||||||||| |||||| |||||| ||| |||||  |||||||||    
T  6908 tttcgcgcgtaaaattcaaaccgttaacccattttcgatgccgttttcgcctacacgctcctgacacttagctctatcataat 6990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0970 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0970
Description:

Target: scaffold0970; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 547 - 660
Target Start/End: Original strand, 2420 - 2532
Alignment:
Q  547 ttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaac 646  Q
    ||||||| |||||||||||||||| ||||||| || || |||| | | |||| ||| ||||||||||||||||| | || | | ||||||||||| ||||    
T  2420 ttttcacaaaaccaacaacaacaacttatttctcatcatcaaa-taaggaattatgaatacccaagccatgaatcatcaacaacaacatcacttagcaac 2518  T
Q  647 aacaacatctattg 660  Q
    ||||||||| ||||    
T  2519 aacaacatcaattg 2532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 547 - 660
Target Start/End: Complemental strand, 858 - 746
Alignment:
Q  547 ttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaac 646  Q
    ||||||| ||| || ||||||||  | ||||| |||||||||| | |||||||||||  ||||||||||||||||| |||| | ||||| ||||| ||||    
T  858 ttttcaccaaaacaccaacaacatctcatttctcaacaacaaa-tcatgaatcatgccaacccaagccatgaattatcatcaacaacatgacttagcaac 760  T
Q  647 aacaacatctattg 660  Q
    ||||||||| ||||    
T  759 aacaacatcaattg 746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 595 - 660
Target Start/End: Original strand, 7581 - 7646
Alignment:
Q  595 gaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||||||||| ||||||||||||||||| |||| | ||||| ||||||||||||||||||| ||||    
T  7581 gaatcatgcaaacccaagccatgaattatcatcaacaacatgacttaacaacaacaacatcaattg 7646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 555 - 660
Target Start/End: Original strand, 31184 - 31288
Alignment:
Q  555 aaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacat 654  Q
    |||||| ||||||||| | ||||| |||||||||  | |||||||||||| ||||||||||||||||| |||| | ||||| ||||| |||||| |||||    
T  31184 aaaccaccaacaacaactcatttctcaacaacaat-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacttagcaacaaaaacat 31282  T
Q  655 ctattg 660  Q
    | ||||    
T  31283 caattg 31288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 555 - 655
Target Start/End: Original strand, 21485 - 21584
Alignment:
Q  555 aaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacat 654  Q
    |||||| ||||||||| | |||||  ||||||||  | |||||||||||| ||||||||||||||||| |||| | ||||| ||||| ||||||||||||    
T  21485 aaaccaccaacaacaactcatttcttaacaacaat-tcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacttagcaacaacaacat 21583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 32 - 116
Target Start/End: Original strand, 3508 - 3592
Alignment:
Q  32 gttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataat 116  Q
    ||||||||| ||||||| |||| |||||| | |||||||||||||||||| |||||| |||||| ||| |||||  |||||||||    
T  3508 gttttcgcgtataaaaaccaaatcgttaacccgttttcgatgccgttttcgcctacacgctcctgacacttagctctatcataat 3592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 596 - 660
Target Start/End: Complemental strand, 33962 - 33898
Alignment:
Q  596 aatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||||||||||||||||||||||||||  ||| | ||||||||||| ||||||||||||| ||||    
T  33962 aatcatgcatacccaagccatgaattattatcaacaacatcacttagcaacaacaacatcaattg 33898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1204 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold1204
Description:

Target: scaffold1204; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 404 - 486
Target Start/End: Complemental strand, 333 - 250
Alignment:
Q  404 cttcataaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaacaac-acttcatttagacatgaattca 486  Q
    ||||| ||||||||||| | ||| ||| | ||||||||||||||||||||| ||||||||| |||||||||| | |||||||||    
T  333 cttcacaaaatggaatacctatggtataaatcaacaacaacaacatatctaattcaacaacaacttcatttaaatatgaattca 250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 554 - 653
Target Start/End: Complemental strand, 24472 - 24374
Alignment:
Q  554 taaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaaca 653  Q
    ||||||| ||||||||||  ||||| |||||||||| | |||||||||||| ||||||| ||||||||| |||| | ||||| || || |||||||||||    
T  24472 taaaccaccaacaacaatccatttctcaacaacaaa-tcatgaatcatgcaaacccaagacatgaattatcatcaacaacatgacatagcaacaacaaca 24374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 16012 - 16102
Alignment:
Q  6 gacatcatcagattttcaacttct-acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcct 95  Q
    |||| |||||||||||| | || | |||||||| ||| |||||  ||||||||||| |||||||||||||||||||| |||||| ||||||    
T  16012 gacaacatcagattttccaattttcacgttttctcgcgtaaaatccaaaccgttaacctgttttcgatgccgttttcgcctacacgctcct 16102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 116
Target Start/End: Original strand, 28182 - 28264
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataat 116  Q
    |||||||||||||| |||||||||||||| | |||  ||||||||||| ||||||||||||| ||| ||| |  |||||||||    
T  28182 tttcgcgcataaaattcaaaccgttaatcggattttaatgccgttttcgcctacatgctcctgacacttaactctatcataat 28264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0554 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 547 - 660
Target Start/End: Original strand, 1881 - 1993
Alignment:
Q  547 ttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaac 646  Q
    ||||||| ||||||  |||||||  | ||||| |||||||||| | ||||||||||||||| ||||||| |||||| ||||   ||||| ||||| ||||    
T  1881 ttttcaccaaaccactaacaacatctcatttctcaacaacaaa-tcatgaatcatgcatactcaagccaagaattatcatcatcaacatgacttagcaac 1979  T
Q  647 aacaacatctattg 660  Q
    ||||||||| ||||    
T  1980 aacaacatcaattg 1993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 547 - 660
Target Start/End: Complemental strand, 2598 - 2486
Alignment:
Q  547 ttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaac 646  Q
    ||||||| |||||||||||||||| ||||||| || || |||||  |||||| ||| |  |||||||||||||| | |||| | |||||||||||  |||    
T  2598 ttttcaccaaaccaacaacaacaacttatttctcatcatcaaaac-atgaattatgaacgcccaagccatgaatcatcatcaacaacatcacttaggaac 2500  T
Q  647 aacaacatctattg 660  Q
    ||||||||| ||||    
T  2499 aacaacatcaattg 2486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 547 - 660
Target Start/End: Complemental strand, 800 - 688
Alignment:
Q  547 ttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaac 646  Q
    ||||||| ||| || ||||||||  | ||||| |||||||||| | |||||||||||  ||||||||||||||||| |||| | ||||| |||||  |||    
T  800 ttttcaccaaaacaccaacaacatctcatttctcaacaacaaa-tcatgaatcatgccaacccaagccatgaattatcatcaacaacatgacttagtaac 702  T
Q  647 aacaacatctattg 660  Q
    ||||||||| ||||    
T  701 aacaacatcaattg 688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 548 - 653
Target Start/End: Complemental strand, 31569 - 31465
Alignment:
Q  548 tttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaaca 647  Q
    |||||| |||||| ||||||||||  ||||| |||||||||| |||||||||||||| ||| |||||||| || | |||| | || || ||| |||||||    
T  31569 tttcacaaaaccaccaacaacaatccatttctcaacaacaaa-ttatgaatcatgcaaacctaagccatgtatcatcatcaacaatatgactaaacaaca 31471  T
Q  648 acaaca 653  Q
    ||||||    
T  31470 acaaca 31465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 548 - 653
Target Start/End: Original strand, 41275 - 41379
Alignment:
Q  548 tttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaaca 647  Q
    |||||| |||||| ||||||||||  ||||| |||||||||| |||||||||||||| ||| |||||||| || | |||| | || || ||| |||||||    
T  41275 tttcacaaaaccaccaacaacaatccatttctcaacaacaaa-ttatgaatcatgcaaacctaagccatgtatcatcatcaacaatatgactaaacaaca 41373  T
Q  648 acaaca 653  Q
    ||||||    
T  41374 acaaca 41379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 548 - 653
Target Start/End: Complemental strand, 253270 - 253166
Alignment:
Q  548 tttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaaca 647  Q
    |||||| |||||| ||||||||||  ||||| || ||| ||| | |||||||||||| ||||||||| ||||||| |||| | ||||| ||||||||| |    
T  253270 tttcacaaaaccaccaacaacaatccatttctcatcaagaaa-tcatgaatcatgcaaacccaagccttgaattatcatcaacaacatgacttaacaaaa 253172  T
Q  648 acaaca 653  Q
    ||||||    
T  253171 acaaca 253166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 37; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 551 - 655
Target Start/End: Original strand, 3488 - 3591
Alignment:
Q  551 cactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaaca 650  Q
    |||||||||| |||||||| |  ||||| |||||||||| | ||||| |||||| ||||||||||||||||| |||| | || || || || ||||||||    
T  3488 cactaaaccaccaacaacattccatttctcaacaacaaa-taatgaaacatgcaaacccaagccatgaattatcatcaacaagatgacatagcaacaaca 3586  T
Q  651 acatc 655  Q
    |||||    
T  3587 acatc 3591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 562 - 660
Target Start/End: Original strand, 1 - 98
Alignment:
Q  562 caacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    ||||||||||  ||||| |||||||||| | ||||| |||||| ||||||||||||||||| |||| | || || || || ||||||||||||| ||||    
T  1 caacaacaatccatttctcaacaacaaa-taatgaaacatgcaaacccaagccatgaattatcatcaacaagatgacatagcaacaacaacatcaattg 98  T

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Target: scaffold0409 (Bit Score: 36; Significance: 0.00000000006; HSPs: 2)
Name: scaffold0409
Description:

Target: scaffold0409; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 404 - 486
Target Start/End: Complemental strand, 1588 - 1505
Alignment:
Q  404 cttcataaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaa-caacacttcatttagacatgaattca 486  Q
    ||||| ||||||||||| ||||| ||  | ||||||||||||||||||||| ||||| ||  |||||||||| |||||||||||    
T  1588 cttcacaaaatggaatacccatggtacaagtcaacaacaacaacatatctaattcaaccataacttcatttaaacatgaattca 1505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 404 - 486
Target Start/End: Complemental strand, 9843 - 9760
Alignment:
Q  404 cttcataaaatggaatatccatgatatcattcaacaacaacaacatatctacttcaa-caacacttcatttagacatgaattca 486  Q
    ||||| ||||||||||| ||||| ||  | ||||||||||||||||||||| ||||| ||  |||||||||| |||||||||||    
T  9843 cttcacaaaatggaatacccatggtacaagtcaacaacaacaacatatctaattcaaccataacttcatttaaacatgaattca 9760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 4319 - 4386
Alignment:
Q  13 tcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgtttt 80  Q
    ||||||||||||| |  |||||||||| |||||||||||||| ||||| | |||||| ||||||||||    
T  4319 tcagattttcaaccttcacgttttcgcacataaaaatcaaactgttaacccgttttcaatgccgtttt 4386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 36; Significance: 0.00000000006; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 548 - 655
Target Start/End: Complemental strand, 70903 - 70797
Alignment:
Q  548 tttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaaca 647  Q
    |||||| ||| || ||||||||  | ||||| ||||||||||   |||||||||||| ||||||| ||||||||| |||| | ||||| ||| |||||||    
T  70903 tttcaccaaaacaccaacaacatctcatttctcaacaacaaacc-atgaatcatgcaaacccaagtcatgaattatcatcaacaacatgactaaacaaca 70805  T
Q  648 acaacatc 655  Q
    ||||||||    
T  70804 acaacatc 70797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 588 - 660
Target Start/End: Original strand, 60811 - 60883
Alignment:
Q  588 aaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||| |||||||||||| ||||||| ||||||||| |||| | ||||| || || ||||||||||||| ||||    
T  60811 aaatcatgaatcatgcaaacccaagtcatgaattatcatcaacaacatgacatatcaacaacaacatcaattg 60883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 35; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 574 - 660
Target Start/End: Original strand, 1309 - 1394
Alignment:
Q  574 atttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    ||||| |||||||||| | |||||||||||| ||||||||||||||| | |||| | ||||| || || ||||||||||||| ||||    
T  1309 atttctcaacaacaaa-tcatgaatcatgcaaacccaagccatgaatgatcatcaacaacatgacatatcaacaacaacatcaattg 1394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 584 - 653
Target Start/End: Complemental strand, 11896 - 11828
Alignment:
Q  584 aacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaaca 653  Q
    |||||||| |||| | ||||| ||||||||||||||||| |||| | ||||| |||||||||||||||||    
T  11896 aacaaaatcatgagttatgca-acccaagccatgaattatcatcaacaacatgacttaacaacaacaaca 11828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 140
Target Start/End: Original strand, 7308 - 7418
Alignment:
Q  30 acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataatgcacagaaaaatc 129  Q
    ||||||||| || |||||  |||||| |||| | |||||||||||||||||| |||||| |||| | ||| ||||   |||||||||  ||||||||||     
T  7308 acgttttcgtgcgtaaaatccaaaccattaacccgttttcgatgccgttttcgcctacacgctcttgacacttagatctatcataatctacagaaaaatt 7407  T
Q  130 ccagtttcaac 140  Q
    | |||||||||    
T  7408 caagtttcaac 7418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1164 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold1164
Description:

Target: scaffold1164; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 547 - 660
Target Start/End: Original strand, 1346 - 1458
Alignment:
Q  547 ttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaac 646  Q
    ||||||| ||| || ||||||||  | ||||| |||||||||| | |||||||||||| ||||||||||||| ||| |||| | ||||| || || ||||    
T  1346 ttttcaccaaaacaccaacaacatctcatttctcaacaacaaa-tcatgaatcatgcaaacccaagccatgatttatcatcaacaacatgacatagcaac 1444  T
Q  647 aacaacatctattg 660  Q
    | |||||| |||||    
T  1445 agcaacatttattg 1458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 34; Significance: 0.000000001; HSPs: 2)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 548 - 653
Target Start/End: Complemental strand, 6372 - 6268
Alignment:
Q  548 tttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaaca 647  Q
    |||||| |||||| ||||||||||  ||||| |||||||||| | |||||||||||| ||||||| |||| || | |||| | || || ||| |||||||    
T  6372 tttcacaaaaccaccaacaacaatccatttctcaacaacaaa-tcatgaatcatgcaaacccaagtcatgtatcatcatcaacaatattactaaacaaca 6274  T
Q  648 acaaca 653  Q
    ||||||    
T  6273 acaaca 6268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 34 - 88
Target Start/End: Complemental strand, 6721 - 6667
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctaca 88  Q
    |||||||| ||||| |||||||||||||| | ||| |||||||||||| ||||||    
T  6721 tttcgcgcgtaaaattcaaaccgttaatcggattttgatgccgttttcgcctaca 6667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0673 (Bit Score: 34; Significance: 0.000000001; HSPs: 2)
Name: scaffold0673
Description:

Target: scaffold0673; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 548 - 653
Target Start/End: Complemental strand, 1103 - 999
Alignment:
Q  548 tttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaaca 647  Q
    |||||| ||| || ||||||||  | ||||| ||||||||||   |||||||||||| ||||||||||||||||| |||| | ||||| || || |||||    
T  1103 tttcaccaaatcaccaacaacatctcatttctcaacaacaaacc-atgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaaca 1005  T
Q  648 acaaca 653  Q
    ||||||    
T  1004 acaaca 999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0673; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 595 - 653
Target Start/End: Complemental strand, 7083 - 7025
Alignment:
Q  595 gaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaaca 653  Q
    |||| ||||| ||||||||||||||||| |||| | ||||| ||| |||||||||||||    
T  7083 gaattatgcaaacccaagccatgaattatcatcaacaacatgactaaacaacaacaaca 7025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 38720 - 38781
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcct 95  Q
    |||||||| |||||  ||||||||||||| | ||| ||||||||||||||||||||| ||||    
T  38720 tttcgcgcgtaaaatgcaaaccgttaatcggattttgatgccgttttcacctacatgatcct 38781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0670 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0670
Description:

Target: scaffold0670; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 547 - 655
Target Start/End: Complemental strand, 7957 - 7850
Alignment:
Q  547 ttttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaac 646  Q
    ||||||| |||||||||||||||| |||||||||| | ||||| | |||| | ||| | |||||||| |||||| | || | | || ||| |||||||||    
T  7957 ttttcacaaaaccaacaacaacaacttatttcacatc-acaaactcatgatttatgaacacccaagctatgaatcatcaacaacaatatctcttaacaac 7859  T
Q  647 aacaacatc 655  Q
    |||||||||    
T  7858 aacaacatc 7850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452 (Bit Score: 33; Significance: 0.000000004; HSPs: 2)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 435 - 486
Target Start/End: Complemental strand, 2997 - 2945
Alignment:
Q  435 caacaacaacaacatatctacttcaacaac-acttcatttagacatgaattca 486  Q
    |||||||||||||||||||| ||||| ||| |||||||||| |||||||||||    
T  2997 caacaacaacaacatatctaattcaaaaacaacttcatttaaacatgaattca 2945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 95
Target Start/End: Complemental strand, 3392 - 3331
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcct 95  Q
    |||||||| ||||| | |||||||||||| | ||| |||||| ||||| |||||||||||||    
T  3392 tttcgcgcgtaaaatttaaaccgttaatcggattttgatgccattttcgcctacatgctcct 3331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 588 - 660
Target Start/End: Original strand, 9942 - 10014
Alignment:
Q  588 aaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||| |||||||||||| ||||||||||||||| | |||| | ||||| || || ||||||||||||| ||||    
T  9942 aaatcatgaatcatgcaaacccaagccatgaataatcatcaacaacatgacatatcaacaacaacatcaattg 10014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 548 - 660
Target Start/End: Original strand, 4907 - 5018
Alignment:
Q  548 tttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaaca 647  Q
    |||||| |||||| ||||||||||  ||||| || || |||| | |||||| ||| | | ||||||||||||||| |||| | ||||| ||||| |||||    
T  4907 tttcacaaaaccaccaacaacaatccatttctcatcagcaaa-tcatgaattatgaacaaccaagccatgaattatcatcaacaacatgacttagcaaca 5005  T
Q  648 acaacatctattg 660  Q
    |||||||| ||||    
T  5006 acaacatcaattg 5018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 548 - 660
Target Start/End: Complemental strand, 77128 - 77017
Alignment:
Q  548 tttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaaca 647  Q
    |||||| |||||| ||||||||| | ||||| || ||||||| | |||||| ||| ||||||||||||||||| | ||   | || |||||||| |||||    
T  77128 tttcacaaaaccaccaacaacaactcatttctcatcaacaaa-tcatgaattatgaatacccaagccatgaatcatcaataacaatatcacttagcaaca 77030  T
Q  648 acaacatctattg 660  Q
    |||||||| ||||    
T  77029 acaacatcaattg 77017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 33; Significance: 0.000000004; HSPs: 4)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 548 - 616
Target Start/End: Complemental strand, 162468 - 162401
Alignment:
Q  548 tttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccat 616  Q
    |||||| |||||| ||||||||||  ||||| |||||||||| | |||||||||||| |||||||||||    
T  162468 tttcacaaaaccaccaacaacaatccatttctcaacaacaaa-tcatgaatcatgcaaacccaagccat 162401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 595 - 653
Target Start/End: Original strand, 164227 - 164285
Alignment:
Q  595 gaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaaca 653  Q
    |||| ||||| ||||||||||||||||| |||| | ||||| ||| |||||||||||||    
T  164227 gaattatgcaaacccaagccatgaattaccatcaacaacatgactaaacaacaacaaca 164285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 617
Target Start/End: Complemental strand, 166546 - 166478
Alignment:
Q  548 tttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatg 617  Q
    |||||| |||||| ||||||||||  ||||  |||||||||| | |||||||||||| ||||||||||||    
T  166546 tttcacaaaaccaccaacaacaatccatttttcaacaacaaa-tcatgaatcatgcaaacccaagccatg 166478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 95
Target Start/End: Complemental strand, 166881 - 166820
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcct 95  Q
    |||||||| ||||| |||| ||||||||| | ||| |||||||||||| |||||| ||||||    
T  166881 tttcgcgcgtaaaattcaagccgttaatcagattttgatgccgttttcgcctacacgctcct 166820  T

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Target: scaffold0011 (Bit Score: 33; Significance: 0.000000004; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 548 - 660
Target Start/End: Complemental strand, 255095 - 254984
Alignment:
Q  548 tttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaaca 647  Q
    |||||| ||| || ||||||||  | ||||| ||||||||||   |||||||||||| || |||||||||||||| |||| | ||||| || || |||||    
T  255095 tttcacgaaaacaccaacaacatctcatttctcaacaacaaacc-atgaatcatgcaaactcaagccatgaattatcatcaacaacatgacatatcaaca 254997  T
Q  648 acaacatctattg 660  Q
    |||||||| ||||    
T  254996 acaacatcaattg 254984  T

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Target: scaffold0011; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 548 - 660
Target Start/End: Complemental strand, 261701 - 261590
Alignment:
Q  548 tttcactaaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaaca 647  Q
    |||||| ||| || ||||||||  | ||||| ||||||||||   |||||||||||| || |||||||||||||| |||| | ||||| || || |||||    
T  261701 tttcacgaaaacaccaacaacatctcatttctcaacaacaaacc-atgaatcatgcaaactcaagccatgaattatcatcaacaacatgacatatcaaca 261603  T
Q  648 acaacatctattg 660  Q
    |||||||| ||||    
T  261602 acaacatcaattg 261590  T

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Target: scaffold1957 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold1957
Description:

Target: scaffold1957; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 140
Target Start/End: Complemental strand, 232 - 125
Alignment:
Q  33 ttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcctaacaattagcagtatcataatgcacagaaaaatccca 132  Q
    ||||| |||||||||  ||||||||||| | ||||| |||| ||||||  |||||| |||||| ||| |||||  || ||||||  |||||||||| | |    
T  232 ttttcacgcataaaatccaaaccgttaacccgtttttgatgtcgtttttgcctacacgctcctgacacttagctctaacataatctacagaaaaattcaa 133  T
Q  133 gtttcaac 140  Q
    ||||||||    
T  132 gtttcaac 125  T

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Target: scaffold0396 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 593 - 660
Target Start/End: Complemental strand, 11945 - 11878
Alignment:
Q  593 atgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    ||||| |||||| || |||||||||||||| |||| | ||||| ||||| ||||||||||||| ||||    
T  11945 atgaaccatgcaaactcaagccatgaattatcatcaacaacatgacttagcaacaacaacatcaattg 11878  T

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Target: scaffold0310 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 593 - 660
Target Start/End: Complemental strand, 351 - 284
Alignment:
Q  593 atgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||||||||||| |||||||| |||||||| |||| | ||||| || || ||||||||||||| ||||    
T  351 atgaatcatgcaaacccaagctatgaattatcatcaacaacatgacatatcaacaacaacatcaattg 284  T

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Target: scaffold0158 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 555 - 653
Target Start/End: Original strand, 24933 - 25028
Alignment:
Q  555 aaaccaacaacaacaatttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaaca 653  Q
    |||||| ||||||||| | ||||| |||||||||  | |||||||||||| ||||||||||||||||| |||| | |||||  | || |||||||||||    
T  24933 aaaccaccaacaacaactcatttctcaacaacaa--tcatgaatcatgca-acccaagccatgaattatcatcaacaacatgccatatcaacaacaaca 25028  T

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Target: scaffold0028 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 593 - 660
Target Start/End: Original strand, 79549 - 79616
Alignment:
Q  593 atgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||||| ||| ||||||||||||||||| | || | |||| |||||||| ||||||||||||| ||||    
T  79549 atgaattatgaatacccaagccatgaatcatcaacaataatatcacttagcaacaacaacatcaattg 79616  T

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Target: scaffold0023 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 154645 - 154586
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctc 93  Q
    |||||||| ||||| |||||||||||||| | ||| |||||||||||| |||||| ||||    
T  154645 tttcgcgcgtaaaattcaaaccgttaatcggattttgatgccgttttctcctacacgctc 154586  T

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Target: scaffold0083 (Bit Score: 31; Significance: 0.00000006; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 595 - 653
Target Start/End: Original strand, 14229 - 14287
Alignment:
Q  595 gaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaaca 653  Q
    |||| ||||| ||||||||||||||||| |||| | ||||| ||| |||||||||||||    
T  14229 gaattatgcaaacccaagccatgaattatcatcaacaacatgactaaacaacaacaaca 14287  T

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Target: scaffold0083; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 595 - 653
Target Start/End: Original strand, 14889 - 14947
Alignment:
Q  595 gaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaaca 653  Q
    |||| ||||| ||||||||||||||||| |||| | ||||| ||| |||||||||||||    
T  14889 gaattatgcaaacccaagccatgaattatcatcaacaacatgactaaacaacaacaaca 14947  T

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Target: scaffold0042 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 34 - 88
Target Start/End: Original strand, 51841 - 51895
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctaca 88  Q
    |||||||| ||||| || ||||||||||| | |||||||||||||||| ||||||    
T  51841 tttcgcgcgtaaaattccaaccgttaatcggatttcgatgccgttttcgcctaca 51895  T

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Target: scaffold0031 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 593 - 655
Target Start/End: Original strand, 31054 - 31116
Alignment:
Q  593 atgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatc 655  Q
    |||||||||||||||||||||||| ||||| |||| | ||| |||| || || ||||||||||    
T  31054 atgaatcatgcatacccaagccataaattatcatcaaaaacctcacatatcagcaacaacatc 31116  T

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Target: scaffold0269 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 16077 - 16138
Alignment:
Q  34 tttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgctcct 95  Q
    |||||||| ||||| |||||||||||||| | ||| |||| ||||||| |||||| ||||||    
T  16077 tttcgcgcgtaaaattcaaaccgttaatcggattttgatgtcgttttcgcctacacgctcct 16138  T

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Target: scaffold0091 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 600 - 653
Target Start/End: Original strand, 32220 - 32273
Alignment:
Q  600 atgcatacccaagccatgaattagcatccataacatcacttaacaacaacaaca 653  Q
    ||||| ||||||||||||||||| |||| | ||||| ||| |||||||||||||    
T  32220 atgcaaacccaagccatgaattatcatcaacaacatgactaaacaacaacaaca 32273  T

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Target: scaffold0091; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 600 - 653
Target Start/End: Complemental strand, 42083 - 42030
Alignment:
Q  600 atgcatacccaagccatgaattagcatccataacatcacttaacaacaacaaca 653  Q
    ||||| ||||||||||||||||| |||| | ||||| ||| |||||||||||||    
T  42083 atgcaaacccaagccatgaattatcatcaacaacatgactaaacaacaacaaca 42030  T

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Target: scaffold0068 (Bit Score: 29; Significance: 0.000001; HSPs: 2)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 584 - 648
Target Start/End: Original strand, 48149 - 48212
Alignment:
Q  584 aacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaa 648  Q
    |||||||| |||||| ||||| ||||||||||||||||| |||| | |||||  |||||||||||    
T  48149 aacaaaatcatgaattatgca-acccaagccatgaattatcatcaacaacatggcttaacaacaa 48212  T

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Target: scaffold0068; HSP #2
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 584 - 648
Target Start/End: Original strand, 61597 - 61660
Alignment:
Q  584 aacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaa 648  Q
    |||||||| |||||| ||||| ||||||||||||||||| |||| | |||||  |||||||||||    
T  61597 aacaaaatcatgaattatgca-acccaagccatgaattatcatcaacaacatggcttaacaacaa 61660  T

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Target: scaffold0013 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 588 - 660
Target Start/End: Original strand, 35483 - 35555
Alignment:
Q  588 aaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattg 660  Q
    |||| |||||| ||| ||||||||||||||||| | || | | ||||||||||| |||||| |||||| ||||    
T  35483 aaatcatgaattatgaatacccaagccatgaatcatcaacaacaacatcacttagcaacaaaaacatcaattg 35555  T

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