View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1774_low_1 (Length: 561)

Name: NF1774_low_1
Description: NF1774
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1774_low_1
NF1774_low_1
[»] chr1 (39 HSPs)
chr1 (175-512)||(6346255-6346591)
chr1 (74-174)||(20304925-20305025)
chr1 (74-174)||(51737675-51737775)
chr1 (74-173)||(40215158-40215257)
chr1 (74-175)||(9910085-9910186)
chr1 (8-179)||(36966498-36966664)
chr1 (74-175)||(37821628-37821729)
chr1 (74-174)||(18404618-18404718)
chr1 (74-174)||(19015574-19015674)
chr1 (74-174)||(25463846-25463946)
chr1 (74-174)||(41876237-41876337)
chr1 (74-174)||(44094867-44094967)
chr1 (74-176)||(25973577-25973679)
chr1 (74-174)||(6883657-6883757)
chr1 (74-174)||(3559787-3559887)
chr1 (98-175)||(19722893-19722970)
chr1 (84-176)||(32000059-32000151)
chr1 (84-174)||(33786426-33786516)
chr1 (77-172)||(44690818-44690914)
chr1 (84-172)||(40273888-40273976)
chr1 (74-174)||(10167569-10167670)
chr1 (98-171)||(33786623-33786696)
chr1 (82-174)||(27523050-27523143)
chr1 (82-137)||(52329453-52329508)
chr1 (8-58)||(44094807-44094857)
chr1 (102-173)||(52064373-52064445)
chr1 (8-58)||(6883596-6883646)
chr1 (8-58)||(18404551-18404601)
chr1 (8-58)||(19015513-19015563)
chr1 (8-58)||(25463785-25463835)
chr1 (8-58)||(40215097-40215147)
chr1 (8-58)||(44690935-44690985)
chr1 (98-135)||(6883527-6883564)
chr1 (98-135)||(16045786-16045823)
chr1 (98-135)||(40215028-40215065)
chr1 (98-170)||(40273706-40273779)
chr1 (98-135)||(44094738-44094775)
chr1 (98-162)||(44691017-44691082)
chr1 (8-56)||(9910201-9910249)
[»] chr7 (29 HSPs)
chr7 (74-176)||(24395141-24395243)
chr7 (74-174)||(34483008-34483108)
chr7 (74-174)||(45637881-45637981)
chr7 (74-172)||(4974532-4974630)
chr7 (74-179)||(3962148-3962253)
chr7 (74-176)||(30848739-30848841)
chr7 (77-174)||(15577642-15577739)
chr7 (74-174)||(15329444-15329544)
chr7 (74-174)||(35445567-35445667)
chr7 (74-174)||(42611981-42612081)
chr7 (74-174)||(48880722-48880822)
chr7 (74-176)||(35876414-35876516)
chr7 (90-174)||(25167651-25167735)
chr7 (82-174)||(42696261-42696354)
chr7 (74-165)||(29737314-29737406)
chr7 (84-173)||(37476876-37476965)
chr7 (77-172)||(20009895-20009991)
chr7 (84-174)||(15238564-15238654)
chr7 (84-174)||(18037157-18037247)
chr7 (8-58)||(45637821-45637871)
chr7 (110-176)||(36790269-36790336)
chr7 (98-136)||(15238421-15238459)
chr7 (8-58)||(25167756-25167806)
chr7 (8-58)||(48880833-48880883)
chr7 (98-135)||(4974723-4974760)
chr7 (98-135)||(35444598-35444635)
chr7 (98-135)||(42611851-42611888)
chr7 (98-135)||(45637752-45637789)
chr7 (107-143)||(20953116-20953152)
[»] chr8 (51 HSPs)
chr8 (8-176)||(10044452-10044620)
chr8 (74-176)||(17841643-17841745)
chr8 (74-174)||(26041908-26042008)
chr8 (8-174)||(37985851-37986011)
chr8 (74-174)||(40779924-40780024)
chr8 (74-173)||(14129029-14129128)
chr8 (74-172)||(24211169-24211267)
chr8 (74-174)||(1645759-1645859)
chr8 (74-174)||(6108028-6108128)
chr8 (74-174)||(15187730-15187830)
chr8 (80-174)||(1503638-1503732)
chr8 (74-184)||(3596826-3596936)
chr8 (74-172)||(20091598-20091696)
chr8 (74-176)||(25581032-25581134)
chr8 (74-172)||(34665551-34665649)
chr8 (74-176)||(42754835-42754937)
chr8 (74-174)||(32064916-32065016)
chr8 (74-176)||(30055686-30055788)
chr8 (75-172)||(38017103-38017201)
chr8 (74-162)||(32394027-32394114)
chr8 (74-163)||(39772608-39772697)
chr8 (86-174)||(31347571-31347659)
chr8 (74-162)||(35353211-35353299)
chr8 (74-149)||(8454003-8454078)
chr8 (75-172)||(37132477-37132575)
chr8 (82-140)||(41819597-41819655)
chr8 (82-171)||(3890412-3890502)
chr8 (84-174)||(7022159-7022249)
chr8 (74-176)||(24844653-24844756)
chr8 (94-174)||(30834850-30834931)
chr8 (98-170)||(39772789-39772862)
chr8 (98-170)||(30835035-30835107)
chr8 (84-174)||(7017653-7017743)
chr8 (13-58)||(1645871-1645916)
chr8 (98-135)||(25581227-25581264)
chr8 (98-162)||(27782105-27782170)
chr8 (8-58)||(6108139-6108189)
chr8 (8-58)||(17841756-17841806)
chr8 (8-58)||(24211459-24211509)
chr8 (77-174)||(27835258-27835345)
chr8 (98-136)||(31347770-31347808)
chr8 (8-58)||(40780035-40780085)
chr8 (13-58)||(8453948-8453993)
chr8 (98-135)||(17841838-17841875)
chr8 (98-135)||(20091789-20091826)
chr8 (98-135)||(32064785-32064822)
chr8 (98-135)||(34665422-34665459)
chr8 (98-162)||(37986043-37986108)
chr8 (13-58)||(38017048-38017093)
chr8 (98-135)||(40780117-40780154)
chr8 (98-135)||(42755030-42755067)
[»] chr5 (37 HSPs)
chr5 (74-175)||(8145543-8145644)
chr5 (74-176)||(33584122-33584224)
chr5 (74-174)||(4892372-4892472)
chr5 (74-176)||(6043305-6043407)
chr5 (74-174)||(3521802-3521902)
chr5 (74-174)||(14138837-14138937)
chr5 (74-174)||(25398408-25398508)
chr5 (74-174)||(37321588-37321688)
chr5 (74-176)||(38899518-38899621)
chr5 (74-171)||(12850972-12851069)
chr5 (74-175)||(2477806-2477907)
chr5 (74-174)||(12614532-12614633)
chr5 (74-173)||(3362949-3363048)
chr5 (84-174)||(22912852-22912942)
chr5 (74-150)||(11360950-11361026)
chr5 (74-132)||(4433845-4433903)
chr5 (84-174)||(17545477-17545567)
chr5 (98-175)||(27482017-27482096)
chr5 (103-162)||(10458409-10458469)
chr5 (81-137)||(13664736-13664792)
chr5 (8-58)||(3362887-3362937)
chr5 (8-58)||(36880229-36880279)
chr5 (98-170)||(8145379-8145452)
chr5 (98-162)||(12614721-12614786)
chr5 (8-58)||(4433913-4433963)
chr5 (8-58)||(4892311-4892361)
chr5 (8-58)||(11361037-11361087)
chr5 (8-58)||(12850910-12850960)
chr5 (8-58)||(14138777-14138827)
chr5 (98-136)||(17545673-17545711)
chr5 (98-136)||(22913042-22913080)
chr5 (8-58)||(25398347-25398397)
chr5 (74-140)||(31640770-31640836)
chr5 (8-58)||(31640846-31640896)
chr5 (98-140)||(31640928-31640970)
chr5 (8-58)||(33584235-33584285)
chr5 (8-58)||(37321699-37321749)
[»] chr4 (56 HSPs)
chr4 (74-176)||(36073519-36073621)
chr4 (74-174)||(2625007-2625107)
chr4 (8-174)||(4751555-4751717)
chr4 (74-174)||(22199429-22199529)
chr4 (74-174)||(33530479-33530579)
chr4 (74-174)||(46442014-46442114)
chr4 (74-174)||(49387682-49387782)
chr4 (74-176)||(44893596-44893698)
chr4 (74-174)||(7744907-7745007)
chr4 (75-174)||(10442582-10442682)
chr4 (74-174)||(21802115-21802215)
chr4 (74-174)||(31078614-31078714)
chr4 (74-174)||(44893008-44893108)
chr4 (74-174)||(53123201-53123301)
chr4 (74-172)||(9089040-9089138)
chr4 (74-174)||(36073121-36073221)
chr4 (74-174)||(47290236-47290336)
chr4 (74-174)||(50156374-50156473)
chr4 (74-172)||(24128409-24128507)
chr4 (74-164)||(23964269-23964359)
chr4 (74-174)||(37219801-37219902)
chr4 (8-174)||(37934736-37934897)
chr4 (74-172)||(17655600-17655699)
chr4 (77-179)||(11314041-11314144)
chr4 (76-174)||(42671840-42671939)
chr4 (74-140)||(30563379-30563445)
chr4 (84-172)||(24392854-24392942)
chr4 (108-176)||(25063367-25063436)
chr4 (82-173)||(44744610-44744698)
chr4 (8-58)||(36073056-36073106)
chr4 (8-58)||(53123140-53123190)
chr4 (98-170)||(23964453-23964526)
chr4 (98-162)||(33530676-33530741)
chr4 (82-176)||(36073254-36073349)
chr4 (8-58)||(7745018-7745068)
chr4 (8-58)||(9088979-9089029)
chr4 (8-58)||(24128348-24128398)
chr4 (8-58)||(30563318-30563368)
chr4 (8-58)||(47290175-47290225)
chr4 (8-58)||(50156484-50156534)
chr4 (13-58)||(2624951-2624996)
chr4 (98-135)||(9088910-9088947)
chr4 (8-57)||(10442696-10442745)
chr4 (98-135)||(10442777-10442814)
chr4 (98-135)||(17655470-17655507)
chr4 (8-49)||(21802237-21802278)
chr4 (98-135)||(21802310-21802347)
chr4 (98-135)||(31078807-31078844)
chr4 (98-143)||(42671701-42671746)
chr4 (98-135)||(44893201-44893238)
chr4 (98-135)||(44893466-44893503)
chr4 (98-135)||(46441884-46441921)
chr4 (98-135)||(47290106-47290143)
chr4 (98-135)||(49387876-49387913)
chr4 (98-135)||(53123071-53123108)
chr4 (98-161)||(36073731-36073795)
[»] chr3 (42 HSPs)
chr3 (74-176)||(30385570-30385672)
chr3 (74-178)||(2754889-2754993)
chr3 (74-174)||(3137209-3137309)
chr3 (74-174)||(22426140-22426240)
chr3 (74-174)||(33113964-33114064)
chr3 (74-174)||(34482683-34482783)
chr3 (74-174)||(37216848-37216948)
chr3 (74-173)||(8320378-8320477)
chr3 (74-177)||(19650692-19650795)
chr3 (74-175)||(3089589-3089690)
chr3 (74-174)||(6042047-6042147)
chr3 (74-175)||(37522223-37522324)
chr3 (74-174)||(3456234-3456334)
chr3 (74-174)||(3574321-3574421)
chr3 (74-176)||(47738281-47738384)
chr3 (74-176)||(26612916-26613019)
chr3 (74-172)||(33145882-33145980)
chr3 (82-174)||(36864827-36864920)
chr3 (74-174)||(48161076-48161176)
chr3 (74-173)||(46919064-46919164)
chr3 (75-176)||(24343720-24343822)
chr3 (84-174)||(40328011-40328102)
chr3 (74-162)||(33839705-33839794)
chr3 (84-174)||(8361834-8361924)
chr3 (84-174)||(9796824-9796914)
chr3 (74-172)||(42921295-42921394)
chr3 (84-174)||(41224414-41224504)
chr3 (74-134)||(42298032-42298092)
chr3 (85-140)||(41883051-41883106)
chr3 (8-58)||(3456173-3456223)
chr3 (98-170)||(9797017-9797090)
chr3 (98-162)||(33145725-33145789)
chr3 (98-132)||(2754760-2754794)
chr3 (98-136)||(8362033-8362071)
chr3 (8-58)||(22426250-22426300)
chr3 (8-58)||(30385120-30385170)
chr3 (8-58)||(33113902-33113952)
chr3 (8-58)||(37522162-37522212)
chr3 (8-58)||(42297973-42298023)
chr3 (98-135)||(3137402-3137439)
chr3 (74-111)||(11347439-11347476)
chr3 (98-162)||(47738117-47738182)
[»] chr2 (34 HSPs)
chr2 (74-176)||(33380377-33380479)
chr2 (74-175)||(35160929-35161030)
chr2 (74-176)||(9293368-9293470)
chr2 (74-176)||(10662058-10662160)
chr2 (74-174)||(13355018-13355118)
chr2 (8-174)||(23267857-23268018)
chr2 (74-176)||(7475301-7475403)
chr2 (74-170)||(3989246-3989342)
chr2 (74-171)||(31174633-31174730)
chr2 (84-174)||(43331092-43331182)
chr2 (74-174)||(22592880-22592983)
chr2 (74-133)||(21936252-21936311)
chr2 (84-176)||(9723586-9723679)
chr2 (74-140)||(16767291-16767357)
chr2 (84-172)||(21393483-21393570)
chr2 (84-135)||(34320991-34321042)
chr2 (98-162)||(14941354-14941419)
chr2 (74-134)||(14941199-14941259)
chr2 (84-140)||(37335824-37335880)
chr2 (129-176)||(39819272-39819319)
chr2 (8-58)||(3989185-3989235)
chr2 (98-170)||(31174822-31174895)
chr2 (99-140)||(37335748-37335789)
chr2 (98-143)||(43330944-43330989)
chr2 (8-58)||(7475414-7475464)
chr2 (8-58)||(9293482-9293532)
chr2 (8-58)||(16767378-16767428)
chr2 (98-140)||(27847667-27847709)
chr2 (8-58)||(31174740-31174790)
chr2 (8-58)||(33380316-33380366)
chr2 (8-58)||(35160866-35160916)
chr2 (98-135)||(9293564-9293601)
chr2 (98-135)||(23268050-23268087)
chr2 (110-169)||(22591487-22591547)
[»] scaffold0178 (1 HSPs)
scaffold0178 (74-175)||(11791-11892)
[»] scaffold0228 (6 HSPs)
scaffold0228 (74-174)||(26106-26206)
scaffold0228 (74-174)||(16154-16254)
scaffold0228 (74-107)||(8572-8605)
scaffold0228 (98-135)||(8442-8479)
scaffold0228 (98-135)||(16024-16061)
scaffold0228 (98-135)||(25976-26013)
[»] chr6 (33 HSPs)
chr6 (74-174)||(17175816-17175916)
chr6 (74-174)||(33696867-33696967)
chr6 (74-175)||(18365368-18365469)
chr6 (74-175)||(18370632-18370733)
chr6 (77-163)||(6031546-6031632)
chr6 (74-179)||(32702375-32702480)
chr6 (74-174)||(23290876-23290976)
chr6 (74-174)||(28675318-28675418)
chr6 (74-177)||(33695118-33695221)
chr6 (74-176)||(2309216-2309318)
chr6 (74-174)||(17705264-17705363)
chr6 (74-137)||(18889476-18889539)
chr6 (84-172)||(11548386-11548474)
chr6 (74-133)||(6127447-6127506)
chr6 (74-174)||(29693615-29693716)
chr6 (108-173)||(34238883-34238948)
chr6 (120-176)||(2121002-2121059)
chr6 (96-176)||(582520-582602)
chr6 (8-58)||(25987039-25987089)
chr6 (98-162)||(11548576-11548641)
chr6 (82-142)||(8515554-8515614)
chr6 (8-58)||(8515632-8515682)
chr6 (8-58)||(17175927-17175977)
chr6 (8-58)||(17705371-17705421)
chr6 (8-58)||(29693547-29693597)
chr6 (8-58)||(33695233-33695283)
chr6 (8-58)||(33696805-33696855)
chr6 (98-162)||(18365561-18365626)
chr6 (98-162)||(18370825-18370890)
chr6 (98-135)||(33695315-33695352)
chr6 (98-135)||(33696736-33696773)
chr6 (74-106)||(9752109-9752141)
chr6 (98-170)||(9752233-9752305)
[»] scaffold0085 (3 HSPs)
scaffold0085 (74-176)||(48019-48121)
scaffold0085 (8-58)||(47959-48009)
scaffold0085 (98-135)||(47890-47927)
[»] scaffold0204 (1 HSPs)
scaffold0204 (74-176)||(4566-4668)
[»] scaffold0096 (3 HSPs)
scaffold0096 (74-175)||(41180-41281)
scaffold0096 (98-162)||(41023-41088)
scaffold0096 (8-58)||(41120-41170)
[»] scaffold0471 (2 HSPs)
scaffold0471 (74-172)||(13012-13110)
scaffold0471 (8-58)||(12951-13001)


Alignment Details
Target: chr1 (Bit Score: 290; Significance: 1e-162; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 290; E-Value: 1e-162
Query Start/End: Original strand, 175 - 512
Target Start/End: Complemental strand, 6346591 - 6346255
Alignment:
Q  175 atcttgaaaatgcttaattgcaattttagtcctctattttttgtttccgtaaatcctttatgatcttatgttggatttcttcgtgatcaaaagttcaaga 274  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  6346591 atcttgaaaatgcttaattgcaattttagtcctctattttttgtttacgtaaatcatttatgatcttatgttggatttcttcatgatcaaaagttcaaga 6346492  T
Q  275 ttaccgtttattatttctcgttttgaaacatatcaaattattgtttagggaattaacaaaactcaaacttagaatttagagagtgaaaaactcgagatcg 374  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6346491 ttaccgtt-attatttctcgttttgaaacatttcaaattattgtttaaggaattaacaaaactcaaacttagaatttagagagtgaaaaactcgagatcg 6346393  T
Q  375 ttgcattcaatgtttgcgtatattttagggttagtcttaaccgcttttatgtacttgcttttacgatttgttttattatgtattcgattttgagcaggaa 474  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||    
T  6346392 ttgcattcaatgtttgcgtatattttagggttagtcttaaccgcttttatgtactttcttttgcgatttgttttattatgtattcaattttgagcaggaa 6346293  T
Q  475 agtattgcttactgttttctgtcaattttgattttcta 512  Q
    ||||||| |||| |||||||||||||||||||||||||    
T  6346292 agtattgtttaccgttttctgtcaattttgattttcta 6346255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 74 - 174
Target Start/End: Complemental strand, 20305025 - 20304925
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||    
T  20305025 atgaaagattgataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 20304926  T
Q  174 c 174  Q
    |    
T  20304925 c 20304925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 74 - 174
Target Start/End: Original strand, 51737675 - 51737775
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||| |||||||    
T  51737675 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 51737774  T
Q  174 c 174  Q
    |    
T  51737775 c 51737775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 74 - 173
Target Start/End: Original strand, 40215158 - 40215257
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||    
T  40215158 atgaaatattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 40215257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 74 - 175
Target Start/End: Complemental strand, 9910186 - 9910085
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||    
T  9910186 atgaaagattaataaataagtctgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctaacattttc 9910087  T
Q  174 ca 175  Q
    ||    
T  9910086 ca 9910085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 8 - 179
Target Start/End: Complemental strand, 36966664 - 36966498
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgtannnnnnnnnnnnnnnatgaaagattaataaatgagactgaaatctaaag 107  Q
    |||| ||||||||||||||| ||||||| |||||||||||| |||||||||               ||||||||||||||||||||||||||||||||||    
T  36966664 ccaataaaatctcagtctggccggaaatcatggggtggtgggtgttatgta-----tcttttttttatgaaagattaataaatgagactgaaatctaaag 36966570  T
Q  108 gtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttccatctt 179  Q
    |||||||||||||||||| |||||||||| ||| ||||||||| |||||||||||||| |||||||| ||||    
T  36966569 gtgattattgtgccatgttattcttgaatttttcttataaaatcattcttgatatctagcattttccttctt 36966498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 74 - 175
Target Start/End: Complemental strand, 37821729 - 37821628
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||| |||||||||||||| |||||||    
T  37821729 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 37821630  T
Q  174 ca 175  Q
    ||    
T  37821629 ca 37821628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 74 - 174
Target Start/End: Original strand, 18404618 - 18404718
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||| |||||||    
T  18404618 atgaaagattaataaatgagactgaaatctaaatgtgattattgtgccatgtcattcttaaatctttcttataaaatcattcttgatatctagcattttc 18404717  T
Q  174 c 174  Q
    |    
T  18404718 c 18404718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 74 - 174
Target Start/End: Original strand, 19015574 - 19015674
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||| || |||||||    
T  19015574 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatgtagcattttc 19015673  T
Q  174 c 174  Q
    |    
T  19015674 c 19015674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 74 - 174
Target Start/End: Original strand, 25463846 - 25463946
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||||| |||||||    
T  25463846 atgaaagattaataaatgagacttaaatctaaaggtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 25463945  T
Q  174 c 174  Q
    |    
T  25463946 c 25463946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 74 - 174
Target Start/End: Complemental strand, 41876337 - 41876237
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||| |||||||||||||| |||||||    
T  41876337 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 41876238  T
Q  174 c 174  Q
    |    
T  41876237 c 41876237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 74 - 174
Target Start/End: Original strand, 44094867 - 44094967
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||||| |||||||||||||| |||||||    
T  44094867 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttggatctttcttataaaataattcttgatatctagcattttc 44094966  T
Q  174 c 174  Q
    |    
T  44094967 c 44094967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 74 - 176
Target Start/End: Original strand, 25973577 - 25973679
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||| ||||||||| |||||||||||||| |||||||    
T  25973577 atgaaagattaataaatgagactgaaatttaaaggtgattattgtgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 25973676  T
Q  174 cat 176  Q
    |||    
T  25973677 cat 25973679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 74 - 174
Target Start/End: Original strand, 6883657 - 6883757
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||| ||||||||| |||||||||||||| |||||||    
T  6883657 atgaaagattaataaatgagactgaaatctaaaggtgaatattatgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 6883756  T
Q  174 c 174  Q
    |    
T  6883757 c 6883757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 74 - 174
Target Start/End: Original strand, 3559787 - 3559887
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||| |||||| ||||||||| |||||||||||||| |||||||    
T  3559787 atgaaagattaataaatgagactgaaatataaaggtgattattgtgtcatatcattcttggatctttcttataaaatcattcttgatatctagcattttc 3559886  T
Q  174 c 174  Q
    |    
T  3559887 c 3559887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 19722970 - 19722893
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttcca 175  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  19722970 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcca 19722893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 84 - 176
Target Start/End: Complemental strand, 32000151 - 32000059
Alignment:
Q  84 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttccat 176  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||   |||| |||||||||||||| ||||||||||    
T  32000151 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttccat 32000059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 84 - 174
Target Start/End: Complemental strand, 33786516 - 33786426
Alignment:
Q  84 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttcc 174  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||   |||| |||||||||||||| ||||||||    
T  33786516 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcc 33786426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 77 - 172
Target Start/End: Complemental strand, 44690914 - 44690818
Alignment:
Q  77 aaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttt-tttataaaattattcttgatatctaacatttt 172  Q
    |||||||||||||| |||||| ||||||| |||||||||| ||||||||||||||||||||||| || ||||||| ||| |||||||||||||||||    
T  44690914 aaagattaataaataagactggaatctaagggtgattattctgccatgtcattcttgaatctttcttgataaaatcattattgatatctaacatttt 44690818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 84 - 172
Target Start/End: Original strand, 40273888 - 40273976
Alignment:
Q  84 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacatttt 172  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||   |||| |||||||||||||| ||||||    
T  40273888 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatatttcttgataaatcattcttgatatctagcatttt 40273976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 74 - 174
Target Start/End: Original strand, 10167569 - 10167670
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaat-cttttttataaaattattcttgatatctaacatttt 172  Q
    |||||| |||||||||| |||||||||||||||||||||||||||  ||| | |||||| |||  ||||||||||||| |||||| |||| |||||||||    
T  10167569 atgaaaaattaataaataagactgaaatctaaaggtgattattgtatcatattattcttaaatatttttttataaaatcattcttaatatgtaacatttt 10167668  T
Q  173 cc 174  Q
    ||    
T  10167669 cc 10167670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 98 - 171
Target Start/End: Original strand, 33786623 - 33786696
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattt 171  Q
    |||| ||| |||||||||||||||||||||||||||||||||| ||   |||| |||||||||||||| |||||    
T  33786623 aaatttaagggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattt 33786696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 82 - 174
Target Start/End: Complemental strand, 27523143 - 27523050
Alignment:
Q  82 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttttt-ataaaattattcttgatatctaacattttcc 174  Q
    ||||||||| ||||| ||||| || |||||||| | ||||||   |||||||||||||| || ||||||| ||||||||||| |||||||||||    
T  27523143 ttaataaataagactaaaatcaaagggtgattaatctgccatacgattcttgaatctttcttgataaaatcattcttgatatataacattttcc 27523050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 82 - 137
Target Start/End: Original strand, 52329453 - 52329508
Alignment:
Q  82 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatc 137  Q
    ||||||| | |||||||||||||| |||||||||| ||| ||||||||||||||||    
T  52329453 ttaataattaagactgaaatctaagggtgattattctgctatgtcattcttgaatc 52329508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 44094807 - 44094857
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| ||||||||||||||| ||||||| |||||||||||| |||||||||    
T  44094807 ccaataaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 44094857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 173
Target Start/End: Complemental strand, 52064445 - 52064373
Alignment:
Q  102 ctaaaggtgattattgtgccatgtcattcttgaatcttt-tttataaaattattcttgatatctaacattttc 173  Q
    |||| ||||| |||| || |||||||||||||||||||| || ||||||| ||| |||||||||| |||||||    
T  52064445 ctaagggtgaatattctgtcatgtcattcttgaatctttcttgataaaatcatttttgatatctagcattttc 52064373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 6883596 - 6883646
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  6883596 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 6883646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 18404551 - 18404601
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| ||||||||||| ||||||||||| || ||||||||| |||||||||    
T  18404551 ccaataaaatctcagtttggtcggaaatcatagggtggtgggtgttatgta 18404601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 19015513 - 19015563
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  19015513 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 19015563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 25463785 - 25463835
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  25463785 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 25463835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 40215097 - 40215147
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  40215097 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 40215147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 44690985 - 44690935
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| ||||||||||||||| ||||||| |||||||| ||| |||||||||    
T  44690985 ccaataaaatctcagtctggccggaaatcatggggtgttgggtgttatgta 44690935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 135
Target Start/End: Complemental strand, 6883564 - 6883527
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattcttgaa 135  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  6883564 aaatctaagggtgattattctgccatgtcattcttgaa 6883527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 135
Target Start/End: Original strand, 16045786 - 16045823
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattcttgaa 135  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  16045786 aaatctaagggtgattattctgccatgtcattcttgaa 16045823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 135
Target Start/End: Complemental strand, 40215065 - 40215028
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattcttgaa 135  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  40215065 aaatctaagggtgattattctgccatgtcattcttgaa 40215028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 170
Target Start/End: Complemental strand, 40273779 - 40273706
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattcttgaatcttt-tttataaaattattcttgatatctaacatt 170  Q
    |||||||| |||||||||| || |||||||||||||||| ||| || | |||||  ||||||||||||| ||||    
T  40273779 aaatctaagggtgattattttgacatgtcattcttgaatttttcttgaaaaaatctttcttgatatctagcatt 40273706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 135
Target Start/End: Complemental strand, 44094775 - 44094738
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattcttgaa 135  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  44094775 aaatctaagggtgattattctgccatgtcattcttgaa 44094738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 162
Target Start/End: Original strand, 44691017 - 44691082
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattcttgaatc-ttttttataaaattattcttgatat 162  Q
    ||||||||  || |||||| |||||||| ||||||||||| |||||||||||||  ||||||||||    
T  44691017 aaatctaagagttattattctgccatgtaattcttgaatctttttttataaaatctttcttgatat 44691082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 9910249 - 9910201
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatg 56  Q
    |||| ||||||||||| ||| ||||||| |||||||||||| |||||||    
T  9910249 ccaataaaatctcagtatggccggaaatcatggggtggtgggtgttatg 9910201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 95; Significance: 3e-46; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 74 - 176
Target Start/End: Original strand, 24395141 - 24395243
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  24395141 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaatcattcttgatatctagcattttc 24395240  T
Q  174 cat 176  Q
    |||    
T  24395241 cat 24395243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 74 - 174
Target Start/End: Original strand, 34483008 - 34483108
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  34483008 atgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 34483107  T
Q  174 c 174  Q
    |    
T  34483108 c 34483108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 74 - 174
Target Start/End: Original strand, 45637881 - 45637981
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| ||||||| |||||||    
T  45637881 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 45637980  T
Q  174 c 174  Q
    |    
T  45637981 c 45637981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 74 - 172
Target Start/End: Complemental strand, 4974630 - 4974532
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacatttt 172  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  4974630 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatcttttttataaaatcattcttgatatctagcatttt 4974532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 74 - 179
Target Start/End: Original strand, 3962148 - 3962253
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||||||| |||||||||||||| |||||||    
T  3962148 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatatttcttataaaatcattcttgatatctagcattttc 3962247  T
Q  174 catctt 179  Q
    | ||||    
T  3962248 cttctt 3962253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 74 - 176
Target Start/End: Original strand, 30848739 - 30848841
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||  |||||||||||||| |||||||    
T  30848739 atgaaagattaataaatgagactgaaatttaaaggtgattattgtgccatgtcattcttgaatttttcttataaaagcattcttgatatctagcattttc 30848838  T
Q  174 cat 176  Q
    |||    
T  30848839 cat 30848841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 77 - 174
Target Start/End: Complemental strand, 15577739 - 15577642
Alignment:
Q  77 aaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttcc 174  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||||| |||||||||||||| ||||||||    
T  15577739 aaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttggatctttcttataaaatcattcttgatatctagcattttcc 15577642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 74 - 174
Target Start/End: Original strand, 15329444 - 15329544
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||| |||||| ||||||| |||||||    
T  15329444 atgaaagattaataaatgagactgaaatctaaaagtgattattgtgccatgtcattcttgaatatttcttataaaatcattctttatatctagcattttc 15329543  T
Q  174 c 174  Q
    |    
T  15329544 c 15329544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 74 - 174
Target Start/End: Original strand, 35445567 - 35445667
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||| ||||||||| |||||||||||||| |||||||    
T  35445567 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatatcattcttgaatttttcttataaaatcattcttgatatctagcattttc 35445666  T
Q  174 c 174  Q
    |    
T  35445667 c 35445667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 74 - 174
Target Start/End: Original strand, 42611981 - 42612081
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||| ||||||||| |||||||||||||| |||||||    
T  42611981 atgaaagattaataaataagactgaaatctaaaggtgattattgtgccatgtcattcttagatctttcttataaaatcattcttgatatctagcattttc 42612080  T
Q  174 c 174  Q
    |    
T  42612081 c 42612081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 74 - 174
Target Start/End: Complemental strand, 48880822 - 48880722
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||| |||||||    
T  48880822 atgaaagattaataaatgaaactgaaatctaaatgtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 48880723  T
Q  174 c 174  Q
    |    
T  48880722 c 48880722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 74 - 176
Target Start/End: Original strand, 35876414 - 35876516
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  || ||| ||||||||| |||||||||||||| |||||||    
T  35876414 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcatttttagatatttcttataaaatcattcttgatatctagcattttc 35876513  T
Q  174 cat 176  Q
    |||    
T  35876514 cat 35876516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 90 - 174
Target Start/End: Complemental strand, 25167735 - 25167651
Alignment:
Q  90 tgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttcc 174  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||| ||||||||    
T  25167735 tgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 25167651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 82 - 174
Target Start/End: Original strand, 42696261 - 42696354
Alignment:
Q  82 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttttt-ataaaattattcttgatatctaacattttcc 174  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||| ||||||| ||| |||||||||||||||||||    
T  42696261 ttaataaatgagactgaaatctaagggtgattattgtaccatgtcattcttgaattttttttgataaaatcattattgatatctaacattttcc 42696354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 74 - 165
Target Start/End: Original strand, 29737314 - 29737406
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttt-tttataaaattattcttgatatcta 165  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||| ||||| |||||| ||||||| || ||||||| ||||||||||||||    
T  29737314 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgacatgttattcttaaatctttcttgataaaatcattcttgatatcta 29737406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 84 - 173
Target Start/End: Complemental strand, 37476965 - 37476876
Alignment:
Q  84 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| || ||||||| ||   |||| |||||||||||||| |||||||    
T  37476965 aataaatgagactgaaatctaagggtgattattgtgccatgtcattattaaatctttcttgataaatcattcttgatatctagcattttc 37476876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 77 - 172
Target Start/End: Complemental strand, 20009991 - 20009895
Alignment:
Q  77 aaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttttt-ataaaattattcttgatatctaacatttt 172  Q
    |||| ||||||||||||||| ||||||||   ||||||||||| ||||||||||||||||||||||| ||||||| |||| ||||||||| ||||||    
T  20009991 aaaggttaataaatgagactaaaatctaagtatgattattgtgtcatgtcattcttgaatcttttttgataaaatcattcatgatatctatcatttt 20009895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 84 - 174
Target Start/End: Original strand, 15238564 - 15238654
Alignment:
Q  84 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttcc 174  Q
    |||||||||||||||||||||| | ||||||||||| |||||||||||| ||| ||||||   |||| |||||||||||||| ||||||||    
T  15238564 aataaatgagactgaaatctaaggatgattattgtgtcatgtcattcttaaatattttttgataaatcattcttgatatctagcattttcc 15238654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 84 - 174
Target Start/End: Original strand, 18037157 - 18037247
Alignment:
Q  84 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttcc 174  Q
    |||||||| ||||||||||||| |||||||||||| ||||||||||||| ||||||| ||   |||| ||| |||||||||| ||||||||    
T  18037157 aataaatgtgactgaaatctaagggtgattattgtaccatgtcattcttaaatctttcttgataaatcattgttgatatctagcattttcc 18037247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 45637821 - 45637871
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| ||||||||||||||| ||||||| |||||||||||| |||||||||    
T  45637821 ccaataaaatctcagtctggccggaaatcatggggtggtggatgttatgta 45637871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 110 - 176
Target Start/End: Complemental strand, 36790336 - 36790269
Alignment:
Q  110 gattattgtgccatgtcattcttgaatcttt-tttataaaattattcttgatatctaacattttccat 176  Q
    |||||||||| |||||||||||||||||||| || ||||||  ||| ||||||| || ||||||||||    
T  36790336 gattattgtgtcatgtcattcttgaatctttgttgataaaaccattattgatatttagcattttccat 36790269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 98 - 136
Target Start/End: Complemental strand, 15238459 - 15238421
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattcttgaat 136  Q
    |||||||| |||||||||| |||||||||||||||||||    
T  15238459 aaatctaatggtgattattctgccatgtcattcttgaat 15238421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 25167806 - 25167756
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| ||||||||||||||| ||||||| |||||||| ||| |||||||||    
T  25167806 ccaataaaatctcagtctggccggaaatcatggggtgatgggtgttatgta 25167756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 48880883 - 48880833
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  48880883 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 48880833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 135
Target Start/End: Original strand, 4974723 - 4974760
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattcttgaa 135  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  4974723 aaatctaagggtgattattctgccatgtcattcttgaa 4974760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 135
Target Start/End: Complemental strand, 35444635 - 35444598
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattcttgaa 135  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  35444635 aaatctaagggtgattattctgccatgtcattcttgaa 35444598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 135
Target Start/End: Complemental strand, 42611888 - 42611851
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattcttgaa 135  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  42611888 aaatctaagggtgattattctgccatgtcattcttgaa 42611851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 135
Target Start/End: Complemental strand, 45637789 - 45637752
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattcttgaa 135  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  45637789 aaatctaagggtgattattctgccatgtcattcttgaa 45637752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 107 - 143
Target Start/End: Original strand, 20953116 - 20953152
Alignment:
Q  107 ggtgattattgtgccatgtcattcttgaatctttttt 143  Q
    |||||||||| |||||| |||||||||||||||||||    
T  20953116 ggtgattattttgccatatcattcttgaatctttttt 20953152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 92; Significance: 2e-44; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 8 - 176
Target Start/End: Original strand, 10044452 - 10044620
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgtannnnnnnnnnnnnnnatgaaagattaataaatgagactgaaatctaaag 107  Q
    |||| ||||||||| ||||||||||||| |||| |||||||||||||||||               ||||||||||||||||||||| ||||||||||||    
T  10044452 ccaataaaatctcaatctggtcggaaatcatggagtggtggttgttatgtatttttttttttttttatgaaagattaataaatgagattgaaatctaaag 10044551  T
Q  108 gtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttccat 176  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||    
T  10044552 gtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttccat 10044620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 74 - 176
Target Start/End: Complemental strand, 17841745 - 17841643
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||| |||||||    
T  17841745 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 17841646  T
Q  174 cat 176  Q
    |||    
T  17841645 cat 17841643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 74 - 174
Target Start/End: Complemental strand, 26042008 - 26041908
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||| |||||||    
T  26042008 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 26041909  T
Q  174 c 174  Q
    |    
T  26041908 c 26041908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 8 - 174
Target Start/End: Complemental strand, 37986011 - 37985851
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgtannnnnnnnnnnnnnnatgaaagattaataaatgagactgaaatctaaag 107  Q
    |||| ||||||||||||||| ||||||| |||||||||||| |||||||||               |||||||||||||||||| |||||||||||||||    
T  37986011 ccaataaaatctcagtctggccggaaatcatggggtggtgggtgttatgta------tttttttttatgaaagattaataaatgggactgaaatctaaag 37985918  T
Q  108 gtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttcc 174  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||    
T  37985917 gtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 37985851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 74 - 174
Target Start/End: Complemental strand, 40780024 - 40779924
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||| |||||||    
T  40780024 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 40779925  T
Q  174 c 174  Q
    |    
T  40779924 c 40779924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 74 - 173
Target Start/End: Original strand, 14129029 - 14129128
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||| |||||||    
T  14129029 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatatttcttataaaatcattcttgatatctagcattttc 14129128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 74 - 172
Target Start/End: Complemental strand, 24211267 - 24211169
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacatttt 172  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||||| ||||||    
T  24211267 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcatttt 24211169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 74 - 174
Target Start/End: Complemental strand, 1645859 - 1645759
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||| |||||||||||||| |||||||    
T  1645859 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggttctttcttataaaatcattcttgatatctagcattttc 1645760  T
Q  174 c 174  Q
    |    
T  1645759 c 1645759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 74 - 174
Target Start/End: Complemental strand, 6108128 - 6108028
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||| |||||||||||||| |||||||    
T  6108128 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 6108029  T
Q  174 c 174  Q
    |    
T  6108028 c 6108028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 74 - 174
Target Start/End: Original strand, 15187730 - 15187830
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||| |||||||||||||| |||||||    
T  15187730 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 15187829  T
Q  174 c 174  Q
    |    
T  15187830 c 15187830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 1503732 - 1503638
Alignment:
Q  80 gattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttcc 174  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||| ||||||||    
T  1503732 gattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 1503638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 74 - 184
Target Start/End: Complemental strand, 3596936 - 3596826
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||| ||||||||| |||||||||||||| |||||||    
T  3596936 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatatcattcttaaatttttcttataaaatcattcttgatatctagcattttc 3596837  T
Q  174 catcttgaaaa 184  Q
    || ||| ||||    
T  3596836 caacttaaaaa 3596826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 74 - 172
Target Start/End: Complemental strand, 20091696 - 20091598
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacatttt 172  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||    
T  20091696 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 20091598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 74 - 176
Target Start/End: Complemental strand, 25581134 - 25581032
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||| ||||||||| |||||||||||||| |||||||    
T  25581134 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 25581035  T
Q  174 cat 176  Q
    |||    
T  25581034 cat 25581032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 74 - 172
Target Start/End: Original strand, 34665551 - 34665649
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacatttt 172  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||    
T  34665551 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 34665649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 74 - 176
Target Start/End: Complemental strand, 42754937 - 42754835
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||| ||||||||| |||||||||||||| |||||||    
T  42754937 atgaaagattaataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 42754838  T
Q  174 cat 176  Q
    |||    
T  42754837 cat 42754835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 74 - 174
Target Start/End: Original strand, 32064916 - 32065016
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||| ||||||||| |||||||||||||| |||||||    
T  32064916 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 32065015  T
Q  174 c 174  Q
    |    
T  32065016 c 32065016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 74 - 176
Target Start/End: Original strand, 30055686 - 30055788
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    ||||||| ||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||| ||||||||| |||||| ||||||| |||||||    
T  30055686 atgaaaggttaataaatgagactaaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 30055785  T
Q  174 cat 176  Q
    |||    
T  30055786 cat 30055788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 75 - 172
Target Start/End: Original strand, 38017103 - 38017201
Alignment:
Q  75 tgaaagattaataaatgagactgaaatctaaaggtga-ttattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacatttt 172  Q
    ||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||| ||||||||| |||||||||||||| ||||||    
T  38017103 tgaaagattaataaatgagactgaaatctaaaggtaaattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 38017201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 74 - 162
Target Start/End: Original strand, 32394027 - 32394114
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatat 162  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||| |||||||||||    
T  32394027 atgaaagattaataaatgagactgaaatctaaaggtgattattgtg-catgtcattcttaaatattttttataaaatcattcttgatat 32394114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 74 - 163
Target Start/End: Complemental strand, 39772697 - 39772608
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatc 163  Q
    |||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||| |||||| ||||||||| ||||||||||||    
T  39772697 atgaaagattaataaacgaaactgaaatctaaaggtgattattgtgtcatgtcattcttggatctttcttataaaatcattcttgatatc 39772608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 86 - 174
Target Start/End: Complemental strand, 31347659 - 31347571
Alignment:
Q  86 taaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttcc 174  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||   |||| |||||||||||||| ||||||||    
T  31347659 taaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcc 31347571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 74 - 162
Target Start/End: Original strand, 35353211 - 35353299
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatat 162  Q
    ||||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||    
T  35353211 atgaaagattaataaatgagattaaaatttaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatat 35353299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 74 - 149
Target Start/End: Original strand, 8454003 - 8454078
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaa 149  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || ||||||||    
T  8454003 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaattcttcttataaaa 8454078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 75 - 172
Target Start/End: Complemental strand, 37132575 - 37132477
Alignment:
Q  75 tgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttt-tttataaaattattcttgatatctaacatttt 172  Q
    |||||| ||||||||| |||||||||||||| ||||||||||||| |||||||||| ||||||||| || ||||||| |||||||||||||| ||||||    
T  37132575 tgaaaggttaataaataagactgaaatctaagggtgattattgtgtcatgtcattcatgaatctttcttgataaaatcattcttgatatctagcatttt 37132477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 82 - 140
Target Start/End: Complemental strand, 41819655 - 41819597
Alignment:
Q  82 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttt 140  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  41819655 ttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatcttt 41819597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 82 - 171
Target Start/End: Complemental strand, 3890502 - 3890412
Alignment:
Q  82 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttt-tttataaaattattcttgatatctaacattt 171  Q
    ||||||||| ||| | |||||||| |||||||||| |||||| |||||||||||||||| || ||||||| |||||||||||||| |||||    
T  3890502 ttaataaataagattaaaatctaatggtgattattctgccatatcattcttgaatctttcttgataaaatcattcttgatatctagcattt 3890412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 84 - 174
Target Start/End: Original strand, 7022159 - 7022249
Alignment:
Q  84 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttcc 174  Q
    |||||||||||||||||||||| || |||||||||| | |||||||||||||||||| ||   |||| ||| |||||||||| ||||||||    
T  7022159 aataaatgagactgaaatctaagggcgattattgtgacttgtcattcttgaatctttcttgataaatcattgttgatatctagcattttcc 7022249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 74 - 176
Target Start/End: Complemental strand, 24844756 - 24844653
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttttt-ataaaattattcttgatatctaacatttt 172  Q
    ||||||| ||||||| | ||| | ||||||||  ||||||||| ||||||| ||||||| ||||||| || ||||||| ||| |||||||||||||||||    
T  24844756 atgaaaggttaataattaagattaaaatctaagagtgattattttgccatgccattcttaaatctttcttgataaaatcattattgatatctaacatttt 24844657  T
Q  173 ccat 176  Q
    ||||    
T  24844656 ccat 24844653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 94 - 174
Target Start/End: Complemental strand, 30834931 - 30834850
Alignment:
Q  94 actgaaatctaaaggtgattattgtgccatgtcattcttgaatcttt-tttataaaattattcttgatatctaacattttcc 174  Q
    |||||||||||| |||| ||||| || |||||||||||| ||||||| || ||||||| |||||||||||||| ||||||||    
T  30834931 actgaaatctaagggtggttattctgtcatgtcattctttaatctttcttgataaaatcattcttgatatctatcattttcc 30834850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 98 - 170
Target Start/End: Original strand, 39772789 - 39772862
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattcttg-aatcttttttataaaattattcttgatatctaacatt 170  Q
    |||||||| |||||||||| |||||||||||||||| ||| ||||| |||||||  |||||||||| |||||||    
T  39772789 aaatctaagggtgattattctgccatgtcattcttgaaatttttttgataaaatatttcttgatatataacatt 39772862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 98 - 170
Target Start/End: Original strand, 30835035 - 30835107
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacatt 170  Q
    ||||| || |||||||||| ||||||||||||||||||| ||||  |||||||  |||||||||| |||||||    
T  30835035 aaatcaaagggtgattattctgccatgtcattcttgaattttttcgataaaatctttcttgatatataacatt 30835107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 84 - 174
Target Start/End: Complemental strand, 7017743 - 7017653
Alignment:
Q  84 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttcc 174  Q
    |||||||||||||||||||||| | |||||||| |   ||||||||||| ||| ||| ||   |||| |||||||||||||| ||||||||    
T  7017743 aataaatgagactgaaatctaaggatgattattataaaatgtcattcttaaatatttcttgataaatcattcttgatatctagcattttcc 7017653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 1645916 - 1645871
Alignment:
Q  13 aaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||||||||| |||||||||||| |||||||||||| |||||||||    
T  1645916 aaaatctcagcctggtcggaaatcatggggtggtgggtgttatgta 1645871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 98 - 135
Target Start/End: Original strand, 25581227 - 25581264
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattcttgaa 135  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  25581227 aaatctaaaggtgattattttgccatgtcattcttgaa 25581264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 98 - 162
Target Start/End: Original strand, 27782105 - 27782170
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattcttgaatcttt-tttataaaattattcttgatat 162  Q
    |||||||| |||||||||| |||||||||||| |||||||||| || |||||||  ||||||||||    
T  27782105 aaatctaagggtgattattctgccatgtcattattgaatctttcttgataaaatatttcttgatat 27782170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 6108189 - 6108139
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  6108189 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 6108139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 17841806 - 17841756
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  17841806 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 17841756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 24211509 - 24211459
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  24211509 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 24211459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 77 - 174
Target Start/End: Complemental strand, 27835345 - 27835258
Alignment:
Q  77 aaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttcc 174  Q
    |||| ||||||||||||| |||||||||| | ||||||||||| ||| |||          ||||| ||||||||||| |||||||||||||||||||    
T  27835345 aaaggttaataaatgagattgaaatctaaggatgattattgtgtcatatca----------tttttgataaaattatttttgatatctaacattttcc 27835258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 98 - 136
Target Start/End: Original strand, 31347770 - 31347808
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattcttgaat 136  Q
    |||||||| |||||||||| |||||||||||||||||||    
T  31347770 aaatctaagggtgattattctgccatgtcattcttgaat 31347808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 40780085 - 40780035
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  40780085 ccaataaaatctcagcctggccggaaatcatggggtggtggatgttatgta 40780035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 8453948 - 8453993
Alignment:
Q  13 aaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||||||||| |||| |||||||||||| ||||||| |||||||||    
T  8453948 aaaatctcagcctggccggaaattatggtgtggtgggtgttatgta 8453993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 135
Target Start/End: Original strand, 17841838 - 17841875
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattcttgaa 135  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  17841838 aaatctaagggtgattattctgccatgtcattcttgaa 17841875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 135
Target Start/End: Original strand, 20091789 - 20091826
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattcttgaa 135  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  20091789 aaatctaagggtgattattctgccatgtcattcttgaa 20091826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 135
Target Start/End: Complemental strand, 32064822 - 32064785
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattcttgaa 135  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  32064822 aaatctaagggtgattattctgccatgtcattcttgaa 32064785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 135
Target Start/End: Complemental strand, 34665459 - 34665422
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattcttgaa 135  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  34665459 aaatctaagggtgattattctgccatgtcattcttgaa 34665422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 162
Target Start/End: Original strand, 37986043 - 37986108
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattctt-gaatcttttttataaaattattcttgatat 162  Q
    |||||||| |||||||||| |||||||||||||||  ||| ||||| |||||||  ||||||||||    
T  37986043 aaatctaagggtgattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatat 37986108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 38017048 - 38017093
Alignment:
Q  13 aaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  38017048 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 38017093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 135
Target Start/End: Original strand, 40780117 - 40780154
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattcttgaa 135  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  40780117 aaatctaagggtgattattctgccatgtcattcttgaa 40780154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 135
Target Start/End: Original strand, 42755030 - 42755067
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattcttgaa 135  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  42755030 aaatctaagggtgattattctgccatgtcattcttgaa 42755067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 90; Significance: 3e-43; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 74 - 175
Target Start/End: Original strand, 8145543 - 8145644
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||    
T  8145543 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 8145642  T
Q  174 ca 175  Q
    ||    
T  8145643 ca 8145644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 74 - 176
Target Start/End: Complemental strand, 33584224 - 33584122
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||| |||||||    
T  33584224 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 33584125  T
Q  174 cat 176  Q
    |||    
T  33584124 cat 33584122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 74 - 174
Target Start/End: Original strand, 4892372 - 4892472
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||| |||||||    
T  4892372 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 4892471  T
Q  174 c 174  Q
    |    
T  4892472 c 4892472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 74 - 176
Target Start/End: Complemental strand, 6043407 - 6043305
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||| |||||||||||||| |||||||    
T  6043407 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 6043308  T
Q  174 cat 176  Q
    |||    
T  6043307 cat 6043305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 74 - 174
Target Start/End: Complemental strand, 3521902 - 3521802
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||| |||||||||||||| |||||||    
T  3521902 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 3521803  T
Q  174 c 174  Q
    |    
T  3521802 c 3521802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 74 - 174
Target Start/End: Original strand, 14138837 - 14138937
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| ||||||| |||||||    
T  14138837 atgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 14138936  T
Q  174 c 174  Q
    |    
T  14138937 c 14138937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 74 - 174
Target Start/End: Original strand, 25398408 - 25398508
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||| |||||||||||||| |||||||    
T  25398408 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattgttgaatttttcttataaaatcattcttgatatctagcattttc 25398507  T
Q  174 c 174  Q
    |    
T  25398508 c 25398508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 74 - 174
Target Start/End: Complemental strand, 37321688 - 37321588
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||| |||||||||||||| |||||||    
T  37321688 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatttcattcttgaatatttcttataaaatcattcttgatatctagcattttc 37321589  T
Q  174 c 174  Q
    |    
T  37321588 c 37321588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 74 - 176
Target Start/End: Complemental strand, 38899621 - 38899518
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaa-tcttttttataaaattattcttgatatctaacatttt 172  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||| |||||||||||||| ||||||    
T  38899621 atgaaagattaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttgaatttttttttataaaatcattcttgatatctagcatttt 38899522  T
Q  173 ccat 176  Q
    ||||    
T  38899521 ccat 38899518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 74 - 171
Target Start/End: Original strand, 12850972 - 12851069
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattt 171  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||| |||||||||||||| |||||    
T  12850972 atgaaagattaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattt 12851069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 74 - 175
Target Start/End: Original strand, 2477806 - 2477907
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||  |||||| ||||||||| |||||||||||||| |||||||    
T  2477806 atgaaagattaataaataagactgaaatctaaaggtgatcattgtgccatgtcattcttagatctttcttataaaatcattcttgatatctagcattttc 2477905  T
Q  174 ca 175  Q
    ||    
T  2477906 ca 2477907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 74 - 174
Target Start/End: Complemental strand, 12614633 - 12614532
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttttt-ataaaattattcttgatatctaacatttt 172  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| || ||||||||||| ||||||    
T  12614633 atgaaaggttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatcttttttgataaaatcatacttgatatctagcatttt 12614534  T
Q  173 cc 174  Q
    ||    
T  12614533 cc 12614532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 74 - 173
Target Start/End: Original strand, 3362949 - 3363048
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||| ||| ||||||||| |||||||||||||| |||||||    
T  3362949 atgaaagattaataaatgagactgaaatctaaaggtggttattgtgtcatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 3363048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 84 - 174
Target Start/End: Complemental strand, 22912942 - 22912852
Alignment:
Q  84 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttcc 174  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||   |||| |||||||||||||| ||||||||    
T  22912942 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcc 22912852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 74 - 150
Target Start/End: Complemental strand, 11361026 - 11360950
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaat 150  Q
    ||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  11361026 atgaaagattaataaattagattgaaatctaaagatgattattgtgccatgtcattcttgaatctttcttataaaat 11360950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 74 - 132
Target Start/End: Complemental strand, 4433903 - 4433845
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattctt 132  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  4433903 atgaaagattaataaataagactgaaatctaaaggtgattattgtgccatgtcattctt 4433845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 84 - 174
Target Start/End: Complemental strand, 17545567 - 17545477
Alignment:
Q  84 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttcc 174  Q
    |||||||||||||||||||||| | ||||||||||| |||||||||||| ||| ||||||   |||| |||||||||||||| ||||||||    
T  17545567 aataaatgagactgaaatctaaggatgattattgtgtcatgtcattcttaaatattttttgataaatcattcttgatatctagcattttcc 17545477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 27482017 - 27482096
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattcttgaatctttttt-ataaaattattc-ttgatatctaacattttcca 175  Q
    ||||||||||||||||||| ||  |||||||||||||||||||||| ||||||| |||| || |||||||| ||||||||    
T  27482017 aaatctaaaggtgattattctgttatgtcattcttgaatcttttttgataaaatcattctttaatatctaatattttcca 27482096  T

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Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 103 - 162
Target Start/End: Complemental strand, 10458469 - 10458409
Alignment:
Q  103 taaaggtgattattgtgccatgtcattcttgaatcttt-tttataaaattattcttgatat 162  Q
    |||||||||||||| ||||||||||||||||||| ||| || |||||||| ||||||||||    
T  10458469 taaaggtgattattttgccatgtcattcttgaatttttcttgataaaatttttcttgatat 10458409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 81 - 137
Target Start/End: Original strand, 13664736 - 13664792
Alignment:
Q  81 attaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatc 137  Q
    |||||||||| |||||||||||||| |||||||||| |  |||||||||||||||||    
T  13664736 attaataaataagactgaaatctaagggtgattattctatcatgtcattcttgaatc 13664792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 3362887 - 3362937
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| ||||||||||||||| ||||||| |||||||||||| |||||||||    
T  3362887 ccaataaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 3362937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 36880279 - 36880229
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| ||||| ||||||||||||||||||||||| |||||| |||||||||    
T  36880279 ccaataaaatttcagtctggtcggaaattatgggatggtggatgttatgta 36880229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 98 - 170
Target Start/End: Complemental strand, 8145452 - 8145379
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattcttg-aatcttttttataaaattattcttgatatctaacatt 170  Q
    |||||||| |||||||||| |||||||||||||||| ||| || || |||||||  |||||||||| |||||||    
T  8145452 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacatt 8145379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 98 - 162
Target Start/End: Original strand, 12614721 - 12614786
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattcttgaatcttt-tttataaaattattcttgatat 162  Q
    |||||||| |||||||||| || |||||||||||||||||||| || |||||||  ||||||||||    
T  12614721 aaatctaagggtgattattatgtcatgtcattcttgaatctttcttgataaaatatttcttgatat 12614786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 4433963 - 4433913
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| ||||||||||||||| ||||||| ||||| |||||| |||||||||    
T  4433963 ccaataaaatctcagtctggccggaaatcatgggatggtgggtgttatgta 4433913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 4892311 - 4892361
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  4892311 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 4892361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 11361087 - 11361037
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  11361087 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 11361037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 12850910 - 12850960
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  12850910 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 12850960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 14138777 - 14138827
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| ||| |||||||| |||||||||||| |||||||||    
T  14138777 ccaataaaatctcagcctgatcggaaatcatggggtggtgggtgttatgta 14138827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 98 - 136
Target Start/End: Original strand, 17545673 - 17545711
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattcttgaat 136  Q
    |||||||| |||||||||| |||||||||||||||||||    
T  17545673 aaatctaatggtgattattctgccatgtcattcttgaat 17545711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 98 - 136
Target Start/End: Original strand, 22913042 - 22913080
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattcttgaat 136  Q
    |||||||| |||||||||| |||||||||||||||||||    
T  22913042 aaatctaagggtgattattctgccatgtcattcttgaat 22913080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 25398347 - 25398397
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  25398347 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 25398397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 74 - 140
Target Start/End: Complemental strand, 31640836 - 31640770
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttt 140  Q
    ||||||| ||||||||| |||    |||||||||  ||||||| |||||||||||||||||||||||    
T  31640836 atgaaaggttaataaataagatatcaatctaaagtcgattattctgccatgtcattcttgaatcttt 31640770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 31640896 - 31640846
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  31640896 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 31640846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 98 - 140
Target Start/End: Original strand, 31640928 - 31640970
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattcttgaatcttt 140  Q
    |||||||| |||| ||||| |||||||||||||||||||||||    
T  31640928 aaatctaagggtggttattctgccatgtcattcttgaatcttt 31640970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 33584285 - 33584235
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  33584285 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 33584235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 37321749 - 37321699
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| ||||||||||||| | ||||||| |||||||||||| |||||||||    
T  37321749 ccaataaaatctcagtctagccggaaatcatggggtggtgggtgttatgta 37321699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 87; Significance: 2e-41; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 74 - 176
Target Start/End: Original strand, 36073519 - 36073621
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||| |||||||    
T  36073519 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 36073618  T
Q  174 cat 176  Q
    |||    
T  36073619 cat 36073621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 74 - 174
Target Start/End: Original strand, 2625007 - 2625107
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||| ||||||||||||||||||||||    
T  2625007 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcatttttgaatctttcttataaaatcattcttgatatctaacattttc 2625106  T
Q  174 c 174  Q
    |    
T  2625107 c 2625107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 8 - 174
Target Start/End: Original strand, 4751555 - 4751717
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgtannnnnnnnnnnnnnnatgaaagattaataaatgagactgaaatctaaag 107  Q
    |||| ||||||||||||||||||||||| |||||||||||| |||||||||               ||||||||||||||||||||||||||||||||||    
T  4751555 ccaataaaatctcagtctggtcggaaatcatggggtggtgggtgttatgtattttctttttt----atgaaagattaataaatgagactgaaatctaaag 4751650  T
Q  108 gtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttcc 174  Q
    ||| ||||||||||||||||||||| ||| ||| |||||||||||||||||||||||| ||||||||    
T  4751651 gtggttattgtgccatgtcattcttaaatttttcttataaaattattcttgatatctagcattttcc 4751717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 74 - 174
Target Start/End: Original strand, 22199429 - 22199529
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||||| |||||||    
T  22199429 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 22199528  T
Q  174 c 174  Q
    |    
T  22199529 c 22199529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 74 - 174
Target Start/End: Complemental strand, 33530579 - 33530479
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  33530579 atgaaagattaataaataagactgaaatctaaaggtgattattgtgccatgtcattcttggatcttttttataaaatcattcttgatatctagcattttc 33530480  T
Q  174 c 174  Q
    |    
T  33530479 c 33530479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 74 - 174
Target Start/End: Original strand, 46442014 - 46442114
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||| |||||||    
T  46442014 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 46442113  T
Q  174 c 174  Q
    |    
T  46442114 c 46442114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 74 - 174
Target Start/End: Complemental strand, 49387782 - 49387682
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| || |||||||||||||||||||    
T  49387782 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcatccttgatatctaacattttc 49387683  T
Q  174 c 174  Q
    |    
T  49387682 c 49387682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 74 - 176
Target Start/End: Original strand, 44893596 - 44893698
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||| |||||||||||||| |||||||    
T  44893596 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 44893695  T
Q  174 cat 176  Q
    |||    
T  44893696 cat 44893698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 74 - 174
Target Start/End: Complemental strand, 7745007 - 7744907
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  7745007 atgaaatattaataaatgagattgaaatctaaaggtgattattgtgcaatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 7744908  T
Q  174 c 174  Q
    |    
T  7744907 c 7744907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 75 - 174
Target Start/End: Complemental strand, 10442682 - 10442582
Alignment:
Q  75 tgaaagattaa-taaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||    
T  10442682 tgaaagattaaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 10442583  T
Q  174 c 174  Q
    |    
T  10442582 c 10442582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 74 - 174
Target Start/End: Complemental strand, 21802215 - 21802115
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||| |||||||    
T  21802215 atgaaagattaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 21802116  T
Q  174 c 174  Q
    |    
T  21802115 c 21802115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 74 - 174
Target Start/End: Complemental strand, 31078714 - 31078614
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||    
T  31078714 atgaaagattaataaatgagattgaaatctaaagatgattattgtgccatgtcattcttgaattttttttataaaatcattcttgatatctagcattttc 31078615  T
Q  174 c 174  Q
    |    
T  31078614 c 31078614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 74 - 174
Target Start/End: Complemental strand, 44893108 - 44893008
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||| |||||||||||||| |||||||    
T  44893108 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 44893009  T
Q  174 c 174  Q
    |    
T  44893008 c 44893008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 74 - 174
Target Start/End: Original strand, 53123201 - 53123301
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||| |||||||    
T  53123201 atgaaagattaataaatgagactgaaatctaaagatgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 53123300  T
Q  174 c 174  Q
    |    
T  53123301 c 53123301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 74 - 172
Target Start/End: Original strand, 9089040 - 9089138
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacatttt 172  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||| ||||||    
T  9089040 atgaaagattaataaatgagactgaaatctaaagatgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcatttt 9089138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 74 - 174
Target Start/End: Original strand, 36073121 - 36073221
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||| ||| |||||||||| |||||||    
T  36073121 atgaaagattaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttgaatttttcttataaaatcatttttgatatctagcattttc 36073220  T
Q  174 c 174  Q
    |    
T  36073221 c 36073221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 74 - 174
Target Start/End: Original strand, 47290236 - 47290336
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||| |||||||||||||| |||||||    
T  47290236 atgaaagaataataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 47290335  T
Q  174 c 174  Q
    |    
T  47290336 c 47290336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 74 - 174
Target Start/End: Complemental strand, 50156473 - 50156374
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    |||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||| ||| ||||||||| ||||||||||||||||||||||    
T  50156473 atgaaagattaataaatgagactgaaatctaa-ggtgattattatgtcatgtcattcttgaatttttcttataaaatcattcttgatatctaacattttc 50156375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 74 - 172
Target Start/End: Original strand, 24128409 - 24128507
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacatttt 172  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||| ||| ||||||||| |||||||||||||| ||||||    
T  24128409 atgaaagattaataaatgagactgaaatctaaaggtaattattgtgtcatgtcattcttaaatttttcttataaaatcattcttgatatctagcatttt 24128507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 74 - 164
Target Start/End: Complemental strand, 23964359 - 23964269
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatct 164  Q
    ||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||| ||||||| ||||||||| |||||||||||||    
T  23964359 atgaaagattaataaatgagattgaaatctaaagatgattattatgccatgtcattcttaaatctttcttataaaatcattcttgatatct 23964269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 74 - 174
Target Start/End: Original strand, 37219801 - 37219902
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttt-tttataaaattattcttgatatctaacatttt 172  Q
    ||||||| ||||||||| ||| |||||||||| | |||||||| ||||||||||||||| ||||||| || ||||||| |||||||||||||||||||||    
T  37219801 atgaaaggttaataaataagattgaaatctaaggatgattattctgccatgtcattcttaaatctttcttgataaaatcattcttgatatctaacatttt 37219900  T
Q  173 cc 174  Q
    ||    
T  37219901 cc 37219902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 8 - 174
Target Start/End: Complemental strand, 37934897 - 37934736
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgtannnnnnnnnnnnnnnatgaaagattaataaatgagactgaaatctaaag 107  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||||||||               ||||||| ||||||||||||| |||||||||| |    
T  37934897 ccaataaaatctcagtctggtcggaaattatgggatggtggttgttatgtattttttttt------atgaaaggttaataaatgagattgaaatctaagg 37934804  T
Q  108 gtgattattgtgccatgtcattcttgaatcttt-tttataaaattattcttgatatctaacattttcc 174  Q
    |||||||||||| ||| ||||| |||||||||| || ||||||| | || | ||||||||||||||||    
T  37934803 gtgattattgtgtcatatcattattgaatctttcttaataaaatcagtcataatatctaacattttcc 37934736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 74 - 172
Target Start/End: Original strand, 17655600 - 17655699
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttt-tttataaaattattcttgatatctaacatttt 172  Q
    ||||||| |||||||||||||||||||||||||||| |||||| || |||||||||||| ||||||| || ||||||| |||||| ||||||| ||||||    
T  17655600 atgaaaggttaataaatgagactgaaatctaaaggtaattattatgtcatgtcattcttaaatctttcttgataaaatcattcttaatatctagcatttt 17655699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 77 - 179
Target Start/End: Complemental strand, 11314144 - 11314041
Alignment:
Q  77 aaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttt-tttataaaattattcttgatatctaacattttcca 175  Q
    |||| ||||||||| |||||  ||||||| ||||||||||||| ||||||||||||| |||||| || ||||||| |||||||||||||| ||||||||     
T  11314144 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttgatatctagcattttcct 11314045  T
Q  176 tctt 179  Q
    ||||    
T  11314044 tctt 11314041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 76 - 174
Target Start/End: Original strand, 42671840 - 42671939
Alignment:
Q  76 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttt-tttataaaattattcttgatatctaacattttcc 174  Q
    ||||| |||| |||||||||| ||||||||   |||||||| || |||||||||||||||||||| || ||||||| |||||||||||||||||||||||    
T  42671840 gaaaggttaacaaatgagactcaaatctaagaatgattattatgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctaacattttcc 42671939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 74 - 140
Target Start/End: Original strand, 30563379 - 30563445
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttt 140  Q
    ||||||| ||||||||| ||||||||||||||  |||||||||||| ||||||||||||||||||||    
T  30563379 atgaaaggttaataaataagactgaaatctaagtgtgattattgtgtcatgtcattcttgaatcttt 30563445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 84 - 172
Target Start/End: Original strand, 24392854 - 24392942
Alignment:
Q  84 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacatttt 172  Q
    |||||||||||||||||||||| | |||||||||||| ||||||||||| ||| ||| ||   |||| |||||||||||||| ||||||    
T  24392854 aataaatgagactgaaatctaaggatgattattgtgctatgtcattcttaaatatttcttgataaatcattcttgatatctagcatttt 24392942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 108 - 176
Target Start/End: Complemental strand, 25063436 - 25063367
Alignment:
Q  108 gtgattattgtgccatgtcattcttgaatctttttt-ataaaattattcttgatatctaacattttccat 176  Q
    ||||||||| | ||||||||||||||||||||| || ||||||| |||||||||||||| ||||||||||    
T  25063436 gtgattattctaccatgtcattcttgaatctttcttgataaaatcattcttgatatctagcattttccat 25063367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 82 - 173
Target Start/End: Original strand, 44744610 - 44744698
Alignment:
Q  82 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    ||||||||| |||||||||||||| | | ||||||| | |||||||||||||||||   || ||||||| ||| ||||||||||||||||||    
T  44744610 ttaataaataagactgaaatctaaggataattattgagtcatgtcattcttgaatc---ttgataaaatcatttttgatatctaacattttc 44744698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 36073056 - 36073106
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| ||||||||||||||| ||||||| |||||||||||| |||||||||    
T  36073056 ccaataaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 36073106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 53123140 - 53123190
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| ||||||||||||||| ||||||| |||||||||||| |||||||||    
T  53123140 ccaataaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 53123190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 98 - 170
Target Start/End: Original strand, 23964453 - 23964526
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattctt-gaatcttttttataaaattattcttgatatctaacatt 170  Q
    |||||||| |||||||||| |||||||||||||||  ||| ||||| |||||||  |||||||||| |||||||    
T  23964453 aaatctaagggtgattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatatataacatt 23964526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 98 - 162
Target Start/End: Original strand, 33530676 - 33530741
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattcttgaatcttt-tttataaaattattcttgatat 162  Q
    |||||||| |||||||||| ||||||||||||||||||| ||| || |||||||  ||||||||||    
T  33530676 aaatctaagggtgattattctgccatgtcattcttgaatttttcttgataaaatctttcttgatat 33530741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 82 - 176
Target Start/End: Complemental strand, 36073349 - 36073254
Alignment:
Q  82 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttt-tttataaaattattcttgatatctaacattttccat 176  Q
    ||||||||| ||||||||||||||  || |||||| || ||| |||||||| ||||||| || ||||||| ||| ||  |||||| ||||||||||    
T  36073349 ttaataaataagactgaaatctaagagtaattattctggcatatcattcttaaatctttcttgataaaatcatttttagtatctagcattttccat 36073254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 7745068 - 7745018
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  7745068 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 7745018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 9088979 - 9089029
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  9088979 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 9089029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 24128348 - 24128398
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  24128348 ccaataaaatctcagcctggccggaaatcatggggtggtggatgttatgta 24128398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 30563318 - 30563368
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  30563318 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 30563368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 47290175 - 47290225
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  47290175 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 47290225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 50156534 - 50156484
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  50156534 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 50156484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 2624951 - 2624996
Alignment:
Q  13 aaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    ||||||||||||||| ||||||| |||| ||||||| |||||||||    
T  2624951 aaaatctcagtctggccggaaatcatggagtggtgggtgttatgta 2624996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 135
Target Start/End: Complemental strand, 9088947 - 9088910
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattcttgaa 135  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  9088947 aaatctaagggtgattattctgccatgtcattcttgaa 9088910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 10442745 - 10442696
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgt 57  Q
    |||| |||||||||| |||| ||||||| |||||||||||| ||||||||    
T  10442745 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgt 10442696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 135
Target Start/End: Original strand, 10442777 - 10442814
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattcttgaa 135  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  10442777 aaatctaagggtgattattctgccatgtcattcttgaa 10442814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 135
Target Start/End: Complemental strand, 17655507 - 17655470
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattcttgaa 135  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  17655507 aaatctaagggtgattattctgccatgtcattcttgaa 17655470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 49
Target Start/End: Complemental strand, 21802278 - 21802237
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggt 49  Q
    |||| ||||||||||||||| ||||||| |||||||||||||    
T  21802278 ccaataaaatctcagtctggccggaaatcatggggtggtggt 21802237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 135
Target Start/End: Original strand, 21802310 - 21802347
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattcttgaa 135  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  21802310 aaatctaagggtgattattctgccatgtcattcttgaa 21802347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 135
Target Start/End: Original strand, 31078807 - 31078844
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattcttgaa 135  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  31078807 aaatctaagggtgattattctgccatgtcattcttgaa 31078844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 143
Target Start/End: Complemental strand, 42671746 - 42671701
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattcttgaatctttttt 143  Q
    |||||||| |||||||||| ||||||||||||||| ||| ||||||    
T  42671746 aaatctaagggtgattattctgccatgtcattcttaaatttttttt 42671701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 135
Target Start/End: Original strand, 44893201 - 44893238
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattcttgaa 135  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  44893201 aaatctaagggtgattattctgccatgtcattcttgaa 44893238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 135
Target Start/End: Complemental strand, 44893503 - 44893466
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattcttgaa 135  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  44893503 aaatctaagggtgattattctgccatgtcattcttgaa 44893466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 135
Target Start/End: Complemental strand, 46441921 - 46441884
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattcttgaa 135  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  46441921 aaatctaagggtgattattttgccatgtcattcttgaa 46441884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 135
Target Start/End: Complemental strand, 47290143 - 47290106
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattcttgaa 135  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  47290143 aaatctaagggtgattattctgccatgtcattcttgaa 47290106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 135
Target Start/End: Original strand, 49387876 - 49387913
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattcttgaa 135  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  49387876 aaatctaagggtgattattctgccatgtcattcttgaa 49387913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 135
Target Start/End: Complemental strand, 53123108 - 53123071
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattcttgaa 135  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  53123108 aaatctaagggtgattattctgccatgtcattcttgaa 53123071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 98 - 161
Target Start/End: Original strand, 36073731 - 36073795
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattcttgaatcttt-tttataaaattattcttgata 161  Q
    ||||||||| ||||||||| || |||||||||||| ||||||| || |||||||  |||||||||    
T  36073731 aaatctaaaagtgattattttgtcatgtcattcttaaatctttcttcataaaatctttcttgata 36073795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 87; Significance: 2e-41; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 74 - 176
Target Start/End: Original strand, 30385570 - 30385672
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| || |||||||    
T  30385570 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatttagcattttc 30385669  T
Q  174 cat 176  Q
    |||    
T  30385670 cat 30385672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 74 - 178
Target Start/End: Original strand, 2754889 - 2754993
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||| |||||||    
T  2754889 atgaaagattaataaatgagactgaaatttaaaggtgattattgtgccatgtcattcttaaatctttcttataaaatgattcttgatatctagcattttc 2754988  T
Q  174 catct 178  Q
    |||||    
T  2754989 catct 2754993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 74 - 174
Target Start/End: Complemental strand, 3137309 - 3137209
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||| |||||||    
T  3137309 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 3137210  T
Q  174 c 174  Q
    |    
T  3137209 c 3137209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 74 - 174
Target Start/End: Complemental strand, 22426240 - 22426140
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||    
T  22426240 atgaaagattaataaatgagactgaaatctaaatgtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 22426141  T
Q  174 c 174  Q
    |    
T  22426140 c 22426140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 74 - 174
Target Start/End: Original strand, 33113964 - 33114064
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||    
T  33113964 atgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 33114063  T
Q  174 c 174  Q
    |    
T  33114064 c 33114064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 74 - 174
Target Start/End: Complemental strand, 34482783 - 34482683
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||| |||||||    
T  34482783 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 34482684  T
Q  174 c 174  Q
    |    
T  34482683 c 34482683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 74 - 174
Target Start/End: Complemental strand, 37216948 - 37216848
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||| |||||||    
T  37216948 atgaaagattaataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 37216849  T
Q  174 c 174  Q
    |    
T  37216848 c 37216848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 74 - 173
Target Start/End: Complemental strand, 8320477 - 8320378
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||| |||||||    
T  8320477 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattattgatatctagcattttc 8320378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 74 - 177
Target Start/End: Complemental strand, 19650795 - 19650692
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||||| |||||||||||||| |||||||    
T  19650795 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 19650696  T
Q  174 catc 177  Q
    ||||    
T  19650695 catc 19650692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 74 - 175
Target Start/End: Original strand, 3089589 - 3089690
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| ||||||||| |||||||||||||| |||||||    
T  3089589 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttagatctttcttataaaatcattcttgatatctagcattttc 3089688  T
Q  174 ca 175  Q
    ||    
T  3089689 ca 3089690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 74 - 174
Target Start/End: Original strand, 6042047 - 6042147
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||||| |||||||    
T  6042047 atgaaaaattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 6042146  T
Q  174 c 174  Q
    |    
T  6042147 c 6042147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 74 - 175
Target Start/End: Original strand, 37522223 - 37522324
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||| ||||||||| |||||||||||||| |||||||    
T  37522223 atgaaagattaataaatgagactgaaatctaaaggtgattattatgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 37522322  T
Q  174 ca 175  Q
    ||    
T  37522323 ca 37522324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 74 - 174
Target Start/End: Original strand, 3456234 - 3456334
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    |||||||||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||||| ||||||||| |||||||||||||| |||||||    
T  3456234 atgaaagattaataaatgagactgaaatctaaagatgattagtgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 3456333  T
Q  174 c 174  Q
    |    
T  3456334 c 3456334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 74 - 174
Target Start/End: Complemental strand, 3574421 - 3574321
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||| ||||||||| |||||||||||||| |||||||    
T  3574421 atgaaagattaataaatgagactgaaatctagaggtgattattgtgtcatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 3574322  T
Q  174 c 174  Q
    |    
T  3574321 c 3574321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 74 - 176
Target Start/End: Original strand, 47738281 - 47738384
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttt-tttataaaattattcttgatatctaacatttt 172  Q
    ||||||| |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||||||    
T  47738281 atgaaaggttaataaatgagactgaaatctaaggatgattattgtgccatgtcattcttgaatctttcttgataaaatcattcttgatatctaacatttt 47738380  T
Q  173 ccat 176  Q
    ||||    
T  47738381 ccat 47738384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 74 - 176
Target Start/End: Original strand, 26612916 - 26613019
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttt-tttataaaattattcttgatatctaacatttt 172  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| || ||||||| ||| |||||||||||||||||    
T  26612916 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgttattcttgaatctttcttaataaaatcattattgatatctaacatttt 26613015  T
Q  173 ccat 176  Q
    ||||    
T  26613016 ccat 26613019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 74 - 172
Target Start/End: Original strand, 33145882 - 33145980
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacatttt 172  Q
    ||||||| ||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||| ||||||    
T  33145882 atgaaaggttaataaataagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 33145980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 82 - 174
Target Start/End: Complemental strand, 36864920 - 36864827
Alignment:
Q  82 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttttt-ataaaattattcttgatatctaacattttcc 174  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||    
T  36864920 ttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatcttttttgataaaatcattcttgatatctagcattttcc 36864827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 74 - 174
Target Start/End: Original strand, 48161076 - 48161176
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||||| || ||| ||||||||| |||||||||||||| |||||||    
T  48161076 atgaaaaattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcgttcttggatatttcttataaaatcattcttgatatctagcattttc 48161175  T
Q  174 c 174  Q
    |    
T  48161176 c 48161176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 74 - 173
Target Start/End: Original strand, 46919064 - 46919164
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttttt-ataaaattattcttgatatctaacatttt 172  Q
    |||| |||||||||||| |||| |||||||| ||||||||||| |||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||    
T  46919064 atgatagattaataaataagaccgaaatctagaggtgattattctgccatgtcattattgaatcttttttgataaaatcattcttgatatctaacatttt 46919163  T
Q  173 c 173  Q
    |    
T  46919164 c 46919164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 75 - 176
Target Start/End: Original strand, 24343720 - 24343822
Alignment:
Q  75 tgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttttt-ataaaattattcttgatatctaacattttc 173  Q
    |||||| ||||||||| |||||||||||||| |||||||||  |  ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  24343720 tgaaaggttaataaataagactgaaatctaagggtgattatcatatcatgtcattcttgaatcttttttgataaaatcattcttgatatctaacattttc 24343819  T
Q  174 cat 176  Q
    |||    
T  24343820 cat 24343822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 84 - 174
Target Start/End: Original strand, 40328011 - 40328102
Alignment:
Q  84 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttt-tttataaaattattcttgatatctaacattttcc 174  Q
    ||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||| || ||||||| |||||||||||||| ||||||||    
T  40328011 aataaataagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctagcattttcc 40328102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 74 - 162
Target Start/End: Original strand, 33839705 - 33839794
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttt-tttataaaattattcttgatat 162  Q
    ||||||| |||||||||||||||||||| ||| ||||||||||||| |||||||||||||||||||| || ||||||| |||||||||||    
T  33839705 atgaaaggttaataaatgagactgaaatttaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatat 33839794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 84 - 174
Target Start/End: Complemental strand, 8361924 - 8361834
Alignment:
Q  84 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttcc 174  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||| ||   |||| |||||||||||||| ||||||||    
T  8361924 aataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttcc 8361834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 84 - 174
Target Start/End: Complemental strand, 9796914 - 9796824
Alignment:
Q  84 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttcc 174  Q
    ||||||||||||||||||||||  |||||||||||| |||||||||||||||||||| ||   |||| |||||||||||||| ||||||||    
T  9796914 aataaatgagactgaaatctaagagtgattattgtgacatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcc 9796824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 74 - 172
Target Start/End: Original strand, 42921295 - 42921394
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttt-tttataaaattattcttgatatctaacatttt 172  Q
    ||||||| |||||||||||||||||||| ||| ||||||| |||||||||||||||||| ||| ||| || ||||||| |||||| ||||||| ||||||    
T  42921295 atgaaaggttaataaatgagactgaaatttaagggtgattgttgtgccatgtcattcttaaatatttcttgataaaatcattcttaatatctagcatttt 42921394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 84 - 174
Target Start/End: Original strand, 41224414 - 41224504
Alignment:
Q  84 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttcc 174  Q
    ||||||||||| |||||| ||| |||||||||||||||||||||||||||||| ||| ||   |||| |||||||||||||| ||||||||    
T  41224414 aataaatgagattgaaatttaagggtgattattgtgccatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttcc 41224504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 74 - 134
Target Start/End: Original strand, 42298032 - 42298092
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttga 134  Q
    ||||||| |||||||||||||||||||||||| |||| |||||||| ||||||||||||||    
T  42298032 atgaaaggttaataaatgagactgaaatctaagggtggttattgtgtcatgtcattcttga 42298092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 85 - 140
Target Start/End: Complemental strand, 41883106 - 41883051
Alignment:
Q  85 ataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttt 140  Q
    |||||| ||||||||||| |||| |||||||| | |||||||||||||||||||||    
T  41883106 ataaataagactgaaatccaaagatgattattttaccatgtcattcttgaatcttt 41883051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 3456173 - 3456223
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| ||||||||||||||| ||||||| |||||||||||| |||||||||    
T  3456173 ccaataaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 3456223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 98 - 170
Target Start/End: Original strand, 9797017 - 9797090
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattcttgaatcttt-tttataaaattattcttgatatctaacatt 170  Q
    |||||||| |||||||||| ||||||||||||||||||| ||| || | |||||  |||||||||| |||||||    
T  9797017 aaatctaatggtgattattctgccatgtcattcttgaatttttcttgagaaaatctttcttgatatataacatt 9797090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 98 - 162
Target Start/End: Complemental strand, 33145789 - 33145725
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatat 162  Q
    |||||||| |||||||||| ||||||||||||||| ||  ||||| |||||||  ||||||||||    
T  33145789 aaatctaagggtgattattctgccatgtcattcttaaaattttttaataaaatctttcttgatat 33145725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 98 - 132
Target Start/End: Complemental strand, 2754794 - 2754760
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattctt 132  Q
    ||||||||||||||||||| |||||||||||||||    
T  2754794 aaatctaaaggtgattattctgccatgtcattctt 2754760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 98 - 136
Target Start/End: Original strand, 8362033 - 8362071
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattcttgaat 136  Q
    |||||||| |||||||||| |||||||||||||||||||    
T  8362033 aaatctaagggtgattattctgccatgtcattcttgaat 8362071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 22426300 - 22426250
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| ||||| ||||||||| ||||||| |||||||||||| |||||||||    
T  22426300 ccaataaaatttcagtctggccggaaatcatggggtggtgggtgttatgta 22426250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 30385120 - 30385170
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  30385120 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 30385170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 33113902 - 33113952
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| ||||| ||||||||| ||||||| |||||||||||| |||||||||    
T  33113902 ccaataaaatttcagtctggccggaaatcatggggtggtgggtgttatgta 33113952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 37522162 - 37522212
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||  |||| |||||||||||||||||||| |||||||||    
T  37522162 ccaataaaatctcaacctggccggaaattatggggtggtgggtgttatgta 37522212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 42297973 - 42298023
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| ||||||||||||||| ||||||| |||||||||| | |||||||||    
T  42297973 ccaataaaatctcagtctggccggaaatcatggggtggtagatgttatgta 42298023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 135
Target Start/End: Original strand, 3137402 - 3137439
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattcttgaa 135  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  3137402 aaatctaagggtgattattttgccatgtcattcttgaa 3137439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 111
Target Start/End: Original strand, 11347439 - 11347476
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtga 111  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  11347439 atgaaaaattaataaatgagattgaaatctaaaggtga 11347476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 162
Target Start/End: Complemental strand, 47738182 - 47738117
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattcttgaatcttt-tttataaaattattcttgatat 162  Q
    |||||||||||| |||||| |||||| |||||||||||| ||| || |||||||  ||||||||||    
T  47738182 aaatctaaaggtaattattctgccatatcattcttgaatatttcttgataaaatctttcttgatat 47738117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 87; Significance: 2e-41; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 74 - 176
Target Start/End: Original strand, 33380377 - 33380479
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||| |||||||    
T  33380377 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 33380476  T
Q  174 cat 176  Q
    |||    
T  33380477 cat 33380479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 74 - 175
Target Start/End: Original strand, 35160929 - 35161030
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||| |||||||    
T  35160929 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 35161028  T
Q  174 ca 175  Q
    ||    
T  35161029 ca 35161030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 74 - 176
Target Start/End: Complemental strand, 9293470 - 9293368
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||| |||||||    
T  9293470 atgaaagattaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 9293371  T
Q  174 cat 176  Q
    |||    
T  9293370 cat 9293368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 74 - 176
Target Start/End: Original strand, 10662058 - 10662160
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||| |||||||||||||| |||||||    
T  10662058 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 10662157  T
Q  174 cat 176  Q
    |||    
T  10662158 cat 10662160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 74 - 174
Target Start/End: Original strand, 13355018 - 13355118
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||||||||| |||||||||||||| |||||||    
T  13355018 atgaaagattaataaatgagactgaaatctaaaagtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 13355117  T
Q  174 c 174  Q
    |    
T  13355118 c 13355118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 8 - 174
Target Start/End: Complemental strand, 23268018 - 23267857
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgtannnnnnnnnnnnnnnatgaaagattaataaatgagactgaaatctaaag 107  Q
    |||| ||||||||||||||| ||||||| |||||||||||| |||||||||               ||||||||||||||||||||||||||||||||||    
T  23268018 ccaataaaatctcagtctggccggaaatcatggggtggtgggtgttatgta-----tcttttttttatgaaagattaataaatgagactgaaatctaaag 23267924  T
Q  108 gtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttcc 174  Q
    ||||||||||||||||||||||||| ||| ||| ||||||||| |||||||||||||| ||||||||    
T  23267923 gtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttcc 23267857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 74 - 176
Target Start/End: Complemental strand, 7475403 - 7475301
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    ||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||||| ||| ||||||||| |||||||||||||| |||||||    
T  7475403 atgaaagattaataaatgagactgaaatctaaaggtgattattatgtcatatcattcttgaatttttcttataaaatcattcttgatatctagcattttc 7475304  T
Q  174 cat 176  Q
    |||    
T  7475303 cat 7475301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 74 - 170
Target Start/End: Original strand, 3989246 - 3989342
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacatt 170  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||| ||||||||| |||||||||||||| ||||    
T  3989246 atgaaagattaataaatgagactgaaatctaaaggttattattgtgtcatgtcattcttggatctttcttataaaatcattcttgatatctagcatt 3989342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 74 - 171
Target Start/End: Complemental strand, 31174730 - 31174633
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattt 171  Q
    ||||||||||||||||||||| ||||||||||||| | |||||||| |||||||||||||||||||| ||||||||| |||||||||||||| |||||    
T  31174730 atgaaagattaataaatgagattgaaatctaaaggagtttattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattt 31174633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 84 - 174
Target Start/End: Original strand, 43331092 - 43331182
Alignment:
Q  84 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttcc 174  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||   |||| |||||||||||||| ||||||||    
T  43331092 aataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcc 43331182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 74 - 174
Target Start/End: Original strand, 22592880 - 22592983
Alignment:
Q  74 atgaaagattaataaatgagactgaaa--tctaaaggtgattattgtgccatgtcattcttgaatcttt-tttataaaattattcttgatatctaacatt 170  Q
    ||||||| ||||||||| |||||||||  ||||| ||||||||||||| |||||||||||||||||||| || ||||||| |||||||||||||| ||||    
T  22592880 atgaaaggttaataaataagactgaaaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctagcatt 22592979  T
Q  171 ttcc 174  Q
    ||||    
T  22592980 ttcc 22592983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 74 - 133
Target Start/End: Original strand, 21936252 - 21936311
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttg 133  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  21936252 atgaaagattaataaatgaaactgaaatctaaaggtgattattgtgccatgtcattcttg 21936311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 84 - 176
Target Start/End: Original strand, 9723586 - 9723679
Alignment:
Q  84 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttt-tttataaaattattcttgatatctaacattttccat 176  Q
    ||||||| ||||||||||||||||||||||||| || |||||||||||| ||| ||| || || |||| |||||||||||||||||||||||||    
T  9723586 aataaataagactgaaatctaaaggtgattattctgtcatgtcattcttaaatatttcttgatcaaatcattcttgatatctaacattttccat 9723679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 74 - 140
Target Start/End: Complemental strand, 16767357 - 16767291
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttt 140  Q
    ||||||| ||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||    
T  16767357 atgaaaggttaataaatgagactgaaatctaagagtgattattgtgtcatgtcattcttgaatcttt 16767291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 84 - 172
Target Start/End: Complemental strand, 21393570 - 21393483
Alignment:
Q  84 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacatttt 172  Q
    |||||||||||||||||| ||| ||||||||||||| |||||||||||||||| || || || |||| |||||||||||||| ||||||    
T  21393570 aataaatgagactgaaatttaagggtgattattgtgtcatgtcattcttgaattttcttgat-aaatcattcttgatatctagcatttt 21393483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 34321042 - 34320991
Alignment:
Q  84 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaa 135  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  34321042 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaa 34320991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 98 - 162
Target Start/End: Original strand, 14941354 - 14941419
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattcttgaatcttt-tttataaaattattcttgatat 162  Q
    |||||||| |||||||||| ||||||||||||||||||||||| || |||||||  ||||||||||    
T  14941354 aaatctaagggtgattattctgccatgtcattcttgaatctttcttaataaaatctttcttgatat 14941419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 74 - 134
Target Start/End: Complemental strand, 14941259 - 14941199
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttga 134  Q
    ||||||| ||||||||| ||| |||||||||| | ||||||||||| ||||||||||||||    
T  14941259 atgaaaggttaataaataagattgaaatctaaggatgattattgtgtcatgtcattcttga 14941199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 84 - 140
Target Start/End: Original strand, 37335824 - 37335880
Alignment:
Q  84 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttt 140  Q
    |||||||||||||||||||||| |||||||| |||| ||||||||| || |||||||    
T  37335824 aataaatgagactgaaatctaagggtgattactgtgtcatgtcattattaaatcttt 37335880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 129 - 176
Target Start/End: Original strand, 39819272 - 39819319
Alignment:
Q  129 tcttgaatcttttttataaaattattcttgatatctaacattttccat 176  Q
    |||||||| ||| ||||||||| |||||||||||||||||||||||||    
T  39819272 tcttgaatttttcttataaaatcattcttgatatctaacattttccat 39819319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 3989185 - 3989235
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| ||||||||||||||| ||||||| |||||||||||| |||||||||    
T  3989185 ccaataaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 3989235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 98 - 170
Target Start/End: Original strand, 31174822 - 31174895
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattcttg-aatcttttttataaaattattcttgatatctaacatt 170  Q
    |||||||| |||||||||| |||||||||||||||| ||| || || |||||||  |||||||||| |||||||    
T  31174822 aaatctaagggtgattattctgccatgtcattcttgaaattttcttaataaaatctttcttgatatataacatt 31174895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 99 - 140
Target Start/End: Complemental strand, 37335789 - 37335748
Alignment:
Q  99 aatctaaaggtgattattgtgccatgtcattcttgaatcttt 140  Q
    |||||||| ||||||||| |||||||||||||||||||||||    
T  37335789 aatctaaaagtgattattctgccatgtcattcttgaatcttt 37335748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 98 - 143
Target Start/End: Complemental strand, 43330989 - 43330944
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattcttgaatctttttt 143  Q
    |||||||| |||||||||| ||||||||||||||||||| ||||||    
T  43330989 aaatctaagggtgattattctgccatgtcattcttgaatttttttt 43330944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 7475464 - 7475414
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  7475464 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 7475414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 9293532 - 9293482
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  9293532 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 9293482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 16767428 - 16767378
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| ||||||||||||||| ||||||| || ||||||||| |||||||||    
T  16767428 ccaataaaatctcagtctggccggaaatcatagggtggtgggtgttatgta 16767378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 98 - 140
Target Start/End: Complemental strand, 27847709 - 27847667
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattcttgaatcttt 140  Q
    |||||||| |||||||||| || ||||||||||||||||||||    
T  27847709 aaatctaacggtgattattctgtcatgtcattcttgaatcttt 27847667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 31174790 - 31174740
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| ||||||||||||||  ||||||| |||||||||||| |||||||||    
T  31174790 ccaataaaatctcagtctgaccggaaatcatggggtggtgggtgttatgta 31174740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 33380316 - 33380366
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  33380316 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 33380366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 35160866 - 35160916
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  35160866 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 35160916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 135
Target Start/End: Original strand, 9293564 - 9293601
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattcttgaa 135  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  9293564 aaatctaagggtgattattctgccatgtcattcttgaa 9293601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 135
Target Start/End: Original strand, 23268050 - 23268087
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattcttgaa 135  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  23268050 aaatctaagggtgattattctgccatgtcattcttgaa 23268087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 22591547 - 22591487
Alignment:
Q  110 gattattgtgccatgtcattcttgaatctttttt-ataaaattattcttgatatctaacat 169  Q
    ||||||| |||||| |||||||||||| |||||| |||||||  |||||||||| ||||||    
T  22591547 gattattctgccatatcattcttgaattttttttaataaaatctttcttgatatttaacat 22591487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 86; Significance: 8e-41; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 74 - 175
Target Start/End: Original strand, 11791 - 11892
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||| ||||||||||||||||||||||    
T  11791 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaacattttc 11890  T
Q  174 ca 175  Q
    ||    
T  11891 ca 11892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 85; Significance: 3e-40; HSPs: 6)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 74 - 174
Target Start/End: Original strand, 26106 - 26206
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||| |||||||    
T  26106 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 26205  T
Q  174 c 174  Q
    |    
T  26206 c 26206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 74 - 174
Target Start/End: Original strand, 16154 - 16254
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||| |||||||    
T  16154 atgaaagattaataaatgagactgaaatctaaagatgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 16253  T
Q  174 c 174  Q
    |    
T  16254 c 16254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 74 - 107
Target Start/End: Original strand, 8572 - 8605
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaag 107  Q
    ||||||||||||||||||||||||||||||||||    
T  8572 atgaaagattaataaatgagactgaaatctaaag 8605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 135
Target Start/End: Complemental strand, 8479 - 8442
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattcttgaa 135  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  8479 aaatctaagggtgattattctgccatgtcattcttgaa 8442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 135
Target Start/End: Complemental strand, 16061 - 16024
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattcttgaa 135  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  16061 aaatctaagggtgattattctgccatgtcattcttgaa 16024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 135
Target Start/End: Complemental strand, 26013 - 25976
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattcttgaa 135  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  26013 aaatctaagggtgattattctgccatgtcattcttgaa 25976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 85; Significance: 3e-40; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 74 - 174
Target Start/End: Complemental strand, 17175916 - 17175816
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||| |||||||    
T  17175916 atgaaagattaataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 17175817  T
Q  174 c 174  Q
    |    
T  17175816 c 17175816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 74 - 174
Target Start/End: Original strand, 33696867 - 33696967
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||| |||||||    
T  33696867 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatctttcttataaaatcattcttgatatctagcattttc 33696966  T
Q  174 c 174  Q
    |    
T  33696967 c 33696967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 74 - 175
Target Start/End: Complemental strand, 18365469 - 18365368
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||| |||||||||||||| |||||||    
T  18365469 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 18365370  T
Q  174 ca 175  Q
    ||    
T  18365369 ca 18365368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 74 - 175
Target Start/End: Complemental strand, 18370733 - 18370632
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||| |||||||||||||| |||||||    
T  18370733 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 18370634  T
Q  174 ca 175  Q
    ||    
T  18370633 ca 18370632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 77 - 163
Target Start/End: Complemental strand, 6031632 - 6031546
Alignment:
Q  77 aaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatc 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  6031632 aaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatcttttttataaaatcattcttgatatc 6031546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 74 - 179
Target Start/End: Original strand, 32702375 - 32702480
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| ||| ||||||||| |||||||||||||| |||||||    
T  32702375 atgaaagattaataaatgagactgaaatctaaaggtaattattgtgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 32702474  T
Q  174 catctt 179  Q
    | ||||    
T  32702475 cttctt 32702480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 74 - 174
Target Start/End: Complemental strand, 23290976 - 23290876
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||| ||| |||||||||| |||||||    
T  23290976 atgaaagattaataaatgagactgaaatctaaaggtaattattgtgccatatcattcttgaatctttcttataaaatcatttttgatatctagcattttc 23290877  T
Q  174 c 174  Q
    |    
T  23290876 c 23290876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 74 - 174
Target Start/End: Original strand, 28675318 - 28675418
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||| |||||||    
T  28675318 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 28675417  T
Q  174 c 174  Q
    |    
T  28675418 c 28675418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 74 - 177
Target Start/End: Complemental strand, 33695221 - 33695118
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||| ||| ||||||||| |||||||||||||| |||||||    
T  33695221 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatatcattcttaaatatttcttataaaatcattcttgatatctagcattttc 33695122  T
Q  174 catc 177  Q
    ||||    
T  33695121 catc 33695118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 74 - 176
Target Start/End: Complemental strand, 2309318 - 2309216
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||  |||||||||| |||||||    
T  2309318 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcatcgttgatatctagcattttc 2309219  T
Q  174 cat 176  Q
    |||    
T  2309218 cat 2309216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 74 - 174
Target Start/End: Complemental strand, 17705363 - 17705264
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||| |||||||    
T  17705363 atgaaaggttaataaatgagactgaaatctaa-ggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 17705265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 74 - 137
Target Start/End: Complemental strand, 18889539 - 18889476
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatc 137  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18889539 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatc 18889476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 84 - 172
Target Start/End: Complemental strand, 11548474 - 11548386
Alignment:
Q  84 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacatttt 172  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||| || ||   |||| |||||||||||||| ||||||    
T  11548474 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatcgttcttgataaatcattcttgatatctagcatttt 11548386  T

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Target: chr6; HSP #14
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 74 - 133
Target Start/End: Original strand, 6127447 - 6127506
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttg 133  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  6127447 atgaaagattaataaatgagactgaaatctaaaagtgattattgtgccatgtcattcttg 6127506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 74 - 174
Target Start/End: Original strand, 29693615 - 29693716
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttt-tttataaaattattcttgatatctaacatttt 172  Q
    |||||||  |||||||| |||||||||||||| ||| |||||| ||||||||||||||| ||||||| || ||||||| |||||||||||||| ||||||    
T  29693615 atgaaaggataataaataagactgaaatctaagggtcattattctgccatgtcattcttaaatctttcttgataaaatcattcttgatatctagcatttt 29693714  T
Q  173 cc 174  Q
    ||    
T  29693715 cc 29693716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 108 - 173
Target Start/End: Complemental strand, 34238948 - 34238883
Alignment:
Q  108 gtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    |||||||||||| ||||||||||||||||||| || ||||||| |||||||||||||| |||||||    
T  34238948 gtgattattgtgtcatgtcattcttgaatcttcttgataaaatcattcttgatatctagcattttc 34238883  T

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Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 2121059 - 2121002
Alignment:
Q  120 ccatgtcattcttgaatctttttt-ataaaattattcttgatatctaacattttccat 176  Q
    |||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||    
T  2121059 ccatgtcattcttgaatctttttttataaaatcatttttgatatctaacattttccat 2121002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 96 - 176
Target Start/End: Complemental strand, 582602 - 582520
Alignment:
Q  96 tgaaatctaaaggtgattattgtgcc-atgtcattcttgaatctttttta-taaaattattcttgatatctaacattttccat 176  Q
    |||||||||| |||||||||| |||| || |||||||| ||| ||| ||| |||||| |||||||||||||||||||||||||    
T  582602 tgaaatctaatggtgattattctgcccatatcattcttaaatttttcttaataaaatcattcttgatatctaacattttccat 582520  T

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Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 25987039 - 25987089
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| ||||||||||||||| ||||||| |||||||||||| |||||||||    
T  25987039 ccaataaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 25987089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 98 - 162
Target Start/End: Original strand, 11548576 - 11548641
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattcttgaatcttt-tttataaaattattcttgatat 162  Q
    |||||||| |||||||||| ||||||||||||||||||| ||| || | |||||| ||||||||||    
T  11548576 aaatctaagggtgattattctgccatgtcattcttgaatttttcttgagaaaatttttcttgatat 11548641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 82 - 142
Target Start/End: Complemental strand, 8515614 - 8515554
Alignment:
Q  82 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttt 142  Q
    ||||||||| ||||||||||||||  ||||||||| | |||||||||| || |||||||||    
T  8515614 ttaataaataagactgaaatctaagagtgattattctaccatgtcatttttaaatcttttt 8515554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 8515682 - 8515632
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| ||| |||||||| |||||||||||| |||||||||    
T  8515682 ccaataaaatctcagcctgatcggaaatcatggggtggtggatgttatgta 8515632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 17175977 - 17175927
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  17175977 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 17175927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 17705421 - 17705371
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| ||||||||||||||| ||||||| ||||| |||||| |||||||||    
T  17705421 ccaataaaatctcagtctggccggaaatcatgggatggtgggtgttatgta 17705371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 29693547 - 29693597
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  29693547 ccaataaaatctcagcctggccggaaatcatggggtggtggatgttatgta 29693597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 33695283 - 33695233
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  33695283 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 33695233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 33696805 - 33696855
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  33696805 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 33696855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 162
Target Start/End: Original strand, 18365561 - 18365626
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattcttg-aatcttttttataaaattattcttgatat 162  Q
    |||| ||| |||||||||| |||||||||||||||| ||| ||||| |||||||  ||||||||||    
T  18365561 aaatttaagggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatat 18365626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 162
Target Start/End: Original strand, 18370825 - 18370890
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattcttg-aatcttttttataaaattattcttgatat 162  Q
    |||| ||| |||||||||| |||||||||||||||| ||| ||||| |||||||  ||||||||||    
T  18370825 aaatttaagggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatat 18370890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 135
Target Start/End: Original strand, 33695315 - 33695352
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattcttgaa 135  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  33695315 aaatctaagggtgattattctgccatgtcattcttgaa 33695352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 135
Target Start/End: Complemental strand, 33696773 - 33696736
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattcttgaa 135  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  33696773 aaatctaagggtgattattctgccatgtcattcttgaa 33696736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 74 - 106
Target Start/End: Complemental strand, 9752141 - 9752109
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaa 106  Q
    ||||||| |||||||||||||||||||||||||    
T  9752141 atgaaaggttaataaatgagactgaaatctaaa 9752109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 98 - 170
Target Start/End: Original strand, 9752233 - 9752305
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacatt 170  Q
    |||||||| |||||||||| |||||| |||||||||||| ||| ||   || || |||||||||| |||||||    
T  9752233 aaatctaagggtgattattctgccatatcattcttgaatttttcttgataattttttcttgatatataacatt 9752305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 83; Significance: 5e-39; HSPs: 3)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 74 - 176
Target Start/End: Original strand, 48019 - 48121
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||| |||||||    
T  48019 atgaaagattaataaatgagactgaaatctaaagatgattattgtgctatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 48118  T
Q  174 cat 176  Q
    |||    
T  48119 cat 48121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 47959 - 48009
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  47959 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 48009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 135
Target Start/End: Complemental strand, 47927 - 47890
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattcttgaa 135  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  47927 aaatctaagggtgattattctgccatgtcattcttgaa 47890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 79; Significance: 1e-36; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 74 - 176
Target Start/End: Original strand, 4566 - 4668
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||| ||||||||| |||||||||||||| |||||||    
T  4566 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatatcattcttaaatttttcttataaaatcattcttgatatctagcattttc 4665  T
Q  174 cat 176  Q
    |||    
T  4666 cat 4668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 78; Significance: 5e-36; HSPs: 3)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 74 - 175
Target Start/End: Original strand, 41180 - 41281
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacattttc 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||| ||||||||| |||||||||||||| |||||||    
T  41180 atgaaagattaataaatgagactgaaatctaaaggtgattattgtaccatatcattcttggatctttcttataaaatcattcttgatatctagcattttc 41279  T
Q  174 ca 175  Q
    ||    
T  41280 ca 41281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 98 - 162
Target Start/End: Complemental strand, 41088 - 41023
Alignment:
Q  98 aaatctaaaggtgattattgtgccatgtcattcttg-aatcttttttataaaattattcttgatat 162  Q
    |||||||| |||||||||| |||||||||||||||| ||| ||||| |||||||  ||||||||||    
T  41088 aaatctaagggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatat 41023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 41120 - 41170
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  41120 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 41170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 71; Significance: 7e-32; HSPs: 2)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 74 - 172
Target Start/End: Original strand, 13012 - 13110
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaattattcttgatatctaacatttt 172  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||| ||| ||||||||| |||||||||||||| ||||||    
T  13012 atgaaagattaataaatgagactgaaatctaaaggtaattattgtgtcatgtcattcttaaatttttcttataaaatcattcttgatatctagcatttt 13110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 12951 - 13001
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  12951 ccaataaaatctcagcctggccggaaatcatggggtggtggatgttatgta 13001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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