View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17751_high_1 (Length: 774)

Name: NF17751_high_1
Description: NF17751
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17751_high_1
NF17751_high_1
[»] chr6 (46 HSPs)
chr6 (393-758)||(27703094-27703459)
chr6 (28-322)||(26627777-26628070)
chr6 (28-322)||(26733754-26734047)
chr6 (364-546)||(26852469-26852651)
chr6 (456-724)||(26059489-26059782)
chr6 (456-724)||(26079459-26079752)
chr6 (42-212)||(26853496-26853664)
chr6 (195-322)||(27702553-27702681)
chr6 (456-670)||(25486907-25487133)
chr6 (17-201)||(26828251-26828435)
chr6 (588-670)||(26146505-26146587)
chr6 (28-146)||(27702426-27702545)
chr6 (17-197)||(26640563-26640743)
chr6 (17-197)||(26746529-26746709)
chr6 (28-209)||(27652347-27652527)
chr6 (466-538)||(27079154-27079226)
chr6 (598-656)||(25583205-25583263)
chr6 (447-542)||(27661809-27661904)
chr6 (60-163)||(31291298-31291401)
chr6 (322-402)||(26626929-26627010)
chr6 (322-402)||(26732906-26732987)
chr6 (542-635)||(26852366-26852449)
chr6 (704-758)||(27682529-27682583)
chr6 (515-583)||(25986776-25986842)
chr6 (61-150)||(26890000-26890089)
chr6 (688-757)||(27078988-27079057)
chr6 (588-629)||(27423938-27423979)
chr6 (220-274)||(26629167-26629222)
chr6 (222-280)||(26639902-26639961)
chr6 (220-255)||(26650681-26650716)
chr6 (220-274)||(26735143-26735198)
chr6 (222-280)||(26745868-26745927)
chr6 (220-255)||(26756649-26756684)
chr6 (374-445)||(26888957-26889027)
chr6 (220-255)||(26963922-26963957)
chr6 (220-274)||(27423010-27423065)
chr6 (607-657)||(27662009-27662059)
chr6 (684-723)||(26852258-26852297)
chr6 (218-280)||(27506847-27506910)
chr6 (28-90)||(27714193-27714256)
chr6 (504-542)||(25514498-25514536)
chr6 (504-542)||(26146658-26146696)
chr6 (331-424)||(26806255-26806348)
chr6 (373-427)||(27423823-27423877)
chr6 (724-758)||(27715092-27715126)
chr6 (542-583)||(27079085-27079126)
[»] chr8 (2 HSPs)
chr8 (692-758)||(29270364-29270430)
chr8 (28-90)||(29270086-29270149)
[»] scaffold0003 (3 HSPs)
scaffold0003 (588-629)||(63384-63425)
scaffold0003 (220-274)||(64298-64353)
scaffold0003 (373-427)||(63486-63540)
[»] chr4 (3 HSPs)
chr4 (60-100)||(18692521-18692561)
chr4 (60-100)||(18719020-18719060)
chr4 (60-100)||(18674450-18674490)
[»] scaffold0349 (2 HSPs)
scaffold0349 (28-90)||(17688-17751)
scaffold0349 (724-758)||(16818-16852)
[»] chr1 (1 HSPs)
chr1 (454-515)||(26140142-26140203)


Alignment Details
Target: chr6 (Bit Score: 250; Significance: 1e-138; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 250; E-Value: 1e-138
Query Start/End: Original strand, 393 - 758
Target Start/End: Original strand, 27703094 - 27703459
Alignment:
Q  393 aagcatcctcaaatgtaaattgaaacaatattttaagattgcacaaacatcatccacaaaatattacatcatgtctcatcatttgaaaaacttctccaac 492  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| ||||| ||| ||||||| |||||||||||| ||||||||||||    
T  27703094 aagcatccccaaatgtaaatagaaacaatattttaagattgcacaaacataatccagaaaatcttaaatcatgtatcatcatttgaataacttctccaac 27703193  T
Q  493 tagaaacaacaaatttttaattgactatatacagaaattaatcaacatttgtaaacagcaaaccacaaacctccattgttgagattgagagttggcttta 592  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||  |||||    
T  27703194 tagaaacaacgaatttgtaattgactatatacagaaattaatcaacatttgtaaacagaaaatcacaaacctccaatgttgagattgagagttaacttta 27703293  T
Q  593 tgatggacctagaccaaggaatgtacccaacatctttctttcatcttgtgcactgcttaatatttaaatctcatccctatccgtcttgctttttgatgca 692  Q
    ||||||| |||||||||||||||||||| ||||| ||||||||||||||||| || |||| |||| ||||||||||| || ||| |||||||||||||||    
T  27703294 tgatggagctagaccaaggaatgtaccccacatcattctttcatcttgtgcattgtttaaaatttcaatctcatccccatgcgtgttgctttttgatgca 27703393  T
Q  693 cctagactaaggaatgtaccacatgtctttctttgttcctctttcgtcaaatcctgttgttgcaat 758  Q
    |||||||||||||||||||| ||||||||| |||||||||||||| | ||||||||||||||||||    
T  27703394 cctagactaaggaatgtaccccatgtctttttttgttcctctttctttaaatcctgttgttgcaat 27703459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 28 - 322
Target Start/End: Complemental strand, 26628070 - 26627777
Alignment:
Q  28 cctgataaagtacagtcaaagaacaggtaatt-cttagttttggttagagaaaagttgtgtaaactaccgacaacaggctgaaatcgtcggggatggatt 126  Q
    ||||| || ||||||||||||||||   || | ||||||||||||||||||||||||| ||||| ||||||| ||||||||||||| ||||| |||||||    
T  26628070 cctgacaatgtacagtcaaagaacaaaaaaatacttagttttggttagagaaaagttgcgtaaattaccgacgacaggctgaaatcatcgggaatggatt 26627971  T
Q  127 ctccatgttcaactttatgagagagaatgttatttaaaaaagggggatagggagattgaaggaagatgttagaaatatcacttcctcattttatgatata 226  Q
    || ||||||||||| |  ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||  ||||    
T  26627970 cttcatgttcaactctgcgagagagaatgttatttaaaaaa-ggggatagggagattgaaggaagatgttaaaaacatcacttcctcattttatactata 26627872  T
Q  227 agatgaagtttgtatctaatttgacctgt-ggacaaaagctacatatttacattagcggtctttttcaaatgacctttcataaagattatgattaaa 322  Q
    |||||||||||||||||   |  |||||| |||||||||||||  |||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  26627871 agatgaagtttgtatctccct--acctgtcggacaaaagctactcatttacattaacggtctttttcaaatgatctttcataaagattatgattaaa 26627777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 28 - 322
Target Start/End: Complemental strand, 26734047 - 26733754
Alignment:
Q  28 cctgataaagtacagtcaaagaacaggtaatt-cttagttttggttagagaaaagttgtgtaaactaccgacaacaggctgaaatcgtcggggatggatt 126  Q
    ||||| || ||||||||||||||||   || | ||||||||||||||||||||||||| ||||| ||||||| ||||||||||||| ||||| |||||||    
T  26734047 cctgacaatgtacagtcaaagaacaaaaaaatacttagttttggttagagaaaagttgcgtaaattaccgacgacaggctgaaatcatcgggaatggatt 26733948  T
Q  127 ctccatgttcaactttatgagagagaatgttatttaaaaaagggggatagggagattgaaggaagatgttagaaatatcacttcctcattttatgatata 226  Q
    || ||||||||||| |  ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||  ||||    
T  26733947 cttcatgttcaactctgcgagagagaatgttatttaaaaaa-ggggatagggagattgaaggaagatgttaaaaacatcacttcctcattttatactata 26733849  T
Q  227 agatgaagtttgtatctaatttgacctgt-ggacaaaagctacatatttacattagcggtctttttcaaatgacctttcataaagattatgattaaa 322  Q
    |||||||||||||||||   |  |||||| |||||||||||||  |||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  26733848 agatgaagtttgtatctccct--acctgtcggacaaaagctactcatttacattaacggtctttttcaaatgatctttcataaagattatgattaaa 26733754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 364 - 546
Target Start/End: Complemental strand, 26852651 - 26852469
Alignment:
Q  364 tgctttcaatgagaagtgtttgtgctacaaagcatcctcaaatgtaaattgaaacaatattttaagattgcacaaacatcatccacaaaatattacatca 463  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| | ||||||    
T  26852651 tgcttacaacgagaagtgtttgtgctacaaagcatcctcaaatgtaaattgaaacaatattttaagagtgcacaaacatcatcaacaaaatctcacatca 26852552  T
Q  464 tgtctcatcatttgaaaaacttctccaactagaaacaacaaatttttaattgactatatacagaaattaatcaacatttgtaa 546  Q
    ||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||    
T  26852551 tgtctcatcatttgaaaaacttctccaactagaaacaacgaatttgcaattgactatatacagaaattaatcaacatttgtaa 26852469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 456 - 724
Target Start/End: Complemental strand, 26059782 - 26059489
Alignment:
Q  456 ttacatcatgtctcatcatttgaaaaacttctccaactagaaacaacaaatttttaattgactatatacagaaattaatcaacatttgta---------a 546  Q
    ||||||||||||||||  ||| | |||||||||||||||||||||   ||||| ||| |||||| |||||||||||||||||||||| ||         |    
T  26059782 ttacatcatgtctcatggtttaagaaacttctccaactagaaacattgaatttgtaactgactacatacagaaattaatcaacatttatacaaagtataa 26059683  T
Q  547 acagcaaaccacaaacctccattgttgagattgagag----------------ttggctttatgatggacctagaccaaggaatgtacccaacatctttc 630  Q
    ||| |||| ||||||||| || |||||||||||||||                ||  |||||||||||||||| ||| |||||||||||| |||||||||    
T  26059682 acatcaaagcacaaacctgcaatgttgagattgagagaataacaagaagacggttaactttatgatggacctaaaccgaggaatgtaccccacatctttc 26059583  T
Q  631 tttcatcttgtgcactgcttaatatttaaatctcatccctatccgtcttgctttttgatgcacctagactaaggaatgtaccacatgtctttct 724  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||||| || ||||||||    
T  26059582 tttcatcttgtgcactgcttaatatttcaatctcatccccatccgtgttgctttttgatgcacctagactaaggaatgtaccccaagtctttct 26059489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 456 - 724
Target Start/End: Complemental strand, 26079752 - 26079459
Alignment:
Q  456 ttacatcatgtctcatcatttgaaaaacttctccaactagaaacaacaaatttttaattgactatatacagaaattaatcaacatttgta---------a 546  Q
    ||||||||||||||||  ||| | |||||||||||||||||||||   ||||| ||| |||||| |||||||||||||||||||||| ||         |    
T  26079752 ttacatcatgtctcatggtttaagaaacttctccaactagaaacattgaatttgtaactgactacatacagaaattaatcaacatttatacaaagtataa 26079653  T
Q  547 acagcaaaccacaaacctccattgttgagattgagag----------------ttggctttatgatggacctagaccaaggaatgtacccaacatctttc 630  Q
    ||| |||| ||||||||| || |||||||||||||||                ||  |||||||||||||||| ||| |||||||||||| |||||||||    
T  26079652 acatcaaagcacaaacctgcaatgttgagattgagagaataacaagaagacggttaactttatgatggacctaaaccgaggaatgtaccccacatctttc 26079553  T
Q  631 tttcatcttgtgcactgcttaatatttaaatctcatccctatccgtcttgctttttgatgcacctagactaaggaatgtaccacatgtctttct 724  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||||| || ||||||||    
T  26079552 tttcatcttgtgcactgcttaatatttcaatctcatccccatccgtgttgctttttgatgcacctagactaaggaatgtaccccaagtctttct 26079459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 42 - 212
Target Start/End: Complemental strand, 26853664 - 26853496
Alignment:
Q  42 gtcaaagaacaggtaattcttagttttggttagagaaaagttgtgtaaactaccgacaacaggctgaaatcgtcggggatggattctccatgttcaactt 141  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||    
T  26853664 gtcaaagaacaagtaattcttagttttggttagagaaaagttatgtaaactaccgtcaacaggctgaaatcgttgggaatggattctccattttcaactt 26853565  T
Q  142 tatgagagagaatgttatttaaaaaagggggatagggagattgaagga-agatgttagaaatatcacttcct 212  Q
    ||||||||||||| || ||||||||  ||||||||||||||||||| | ||| |||||||| ||||||||||    
T  26853564 tatgagagagaat-ttttttaaaaa--ggggatagggagattgaagaagagaagttagaaacatcacttcct 26853496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 195 - 322
Target Start/End: Original strand, 27702553 - 27702681
Alignment:
Q  195 ttagaaatatcacttcctcattttatgatataagatgaagtttgtatctaatttgacctgt-ggacaaaagctacatatttacattagcggtctttttca 293  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||  ||||||||| ||||||||||||    
T  27702553 ttagaaacatcactttctcattttatgatataagatgaagtttgtatctaatttgacctgtgggataaaagctacacgtttacattaacggtctttttca 27702652  T
Q  294 aatgacctttcataaagattatgattaaa 322  Q
    ||| | |||||||||||||||||||||||    
T  27702653 aataatctttcataaagattatgattaaa 27702681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 456 - 670
Target Start/End: Complemental strand, 25487133 - 25486907
Alignment:
Q  456 ttacatcatgtctcatcatttgaaaaacttctccaactagaaacaacaaatttttaattgactatatacagaaattaatcaacatttgtaaacagcaaac 555  Q
    ||||||||||||||||  ||| | |||||||||||||||||||||   ||||| ||| ||||||||||||||||||  ||||||||| ||  || ||||     
T  25487133 ttacatcatgtctcatggtttaagaaacttctccaactagaaacattgaatttgtaactgactatatacagaaatt--tcaacatttata--caacaaag 25487038  T
Q  556 cacaaacctccattgttgagattgagag----------------ttggctttatgatggacctagaccaaggaatgtacccaacatctttctttcatctt 639  Q
    ||||||||| || |||||||||||||||                ||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  25487037 cacaaacctgcaatgttgagattgagagaataacaagaagacggttaactttatgatggacctagactaaggaatgtacccaacatctttctttcatctt 25486938  T
Q  640 gtgcactgcttaatatttaaatctcatccct 670  Q
    | |||||||||||||||| ||||||||||||    
T  25486937 gcgcactgcttaatatttcaatctcatccct 25486907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 17 - 201
Target Start/End: Complemental strand, 26828435 - 26828251
Alignment:
Q  17 acagatggatccctgataaagtacagtcaaagaacaggtaatt-cttagttttggttagagaaaagttgtgtaaactaccgacaacaggct-gaaatcgt 114  Q
    |||||||||  ||||| || ||||||||||| |||| | || | ||||||||||| |||||||||||| |||||| ||| |||||| |||| ||||||      
T  26828435 acagatggactcctgacaatgtacagtcaaaaaacaagaaaatgcttagttttggatagagaaaagttctgtaaattactgacaactggcttgaaatcaa 26828336  T
Q  115 cggggatggattctccatgttcaactttatgagagagaatgttatttaaaaaagggggatagggagattgaaggaagatgttagaaa 201  Q
    |||| ||||||| |||||||||||  ||||||||||||||||| ||  ||||| |||||||||||||||||||| ||||||||||||    
T  26828335 cgggaatggattttccatgttcaatgttatgagagagaatgttttt--aaaaatggggatagggagattgaaggtagatgttagaaa 26828251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 588 - 670
Target Start/End: Complemental strand, 26146587 - 26146505
Alignment:
Q  588 ctttatgatggacctagaccaaggaatgtacccaacatctttctttcatcttgtgcactgcttaatatttaaatctcatccct 670  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  26146587 ctttatgatggacctagactaaggaatgtacccaacatctttctttcatcttgcgcactgcttaatatttcaatctcatccct 26146505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 28 - 146
Target Start/End: Original strand, 27702426 - 27702545
Alignment:
Q  28 cctgataaagtacagtcaaagaacaggtaatt-cttagttttggttagagaaaagttgtgtaaactaccgacaacaggctgaaatcgtcggggatggatt 126  Q
    ||||| || ||||||||||| |||| | || | ||||||||||||||||||||||||| ||||| ||| ||||||||||||||||| ||||| |||||||    
T  27702426 cctgacaatgtacagtcaaaaaacaagaaaatacttagttttggttagagaaaagttgcgtaaattacagacaacaggctgaaatcatcgggaatggatt 27702525  T
Q  127 ctccatgttcaactttatga 146  Q
    ||||||||||||||||||||    
T  27702526 ctccatgttcaactttatga 27702545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 17 - 197
Target Start/End: Complemental strand, 26640743 - 26640563
Alignment:
Q  17 acagatggatccctgataaagtacagtcaaagaacaggtaatt-cttagttttggttagagaaaagttgtgtaaactaccgacaacaggctgaaatcgtc 115  Q
    |||||||| | ||||| || |||||||||||||||  |||| | ||||||||||| |||||||||| |  ||||| || |||||||| |||||||| | |    
T  26640743 acagatggtttcctgacaatgtacagtcaaagaactagtaaatgcttagttttggatagagaaaagctccgtaaattatcgacaacaagctgaaattgac 26640644  T
Q  116 ggggatggattctccatgttcaactttatgagagagaatgttatttaaaaaagggggatagggagattgaaggaagatgtta 197  Q
    ||| |||||||||| ||||||||  |||| || ||||| |||  |||||||| |||||||||||||||||||||||||||||    
T  26640643 gggaatggattctctatgttcaatgttataagtgagaaagtt-gttaaaaaatggggatagggagattgaaggaagatgtta 26640563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 17 - 197
Target Start/End: Complemental strand, 26746709 - 26746529
Alignment:
Q  17 acagatggatccctgataaagtacagtcaaagaacaggtaatt-cttagttttggttagagaaaagttgtgtaaactaccgacaacaggctgaaatcgtc 115  Q
    |||||||| | ||||| || |||||||||||||||  |||| | ||||||||||| |||||||||| |  ||||| || |||||||| |||||||| | |    
T  26746709 acagatggtttcctgacaatgtacagtcaaagaactagtaaatgcttagttttggatagagaaaagctccgtaaattatcgacaacaagctgaaattgac 26746610  T
Q  116 ggggatggattctccatgttcaactttatgagagagaatgttatttaaaaaagggggatagggagattgaaggaagatgtta 197  Q
    ||| |||||||||| ||||||||  |||| || ||||| |||  |||||||| |||||||||||||||||||||||||||||    
T  26746609 gggaatggattctctatgttcaatgttataagtgagaaagtt-gttaaaaaatggggatagggagattgaaggaagatgtta 26746529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 28 - 209
Target Start/End: Original strand, 27652347 - 27652527
Alignment:
Q  28 cctgataaagtacagtcaaagaacaggtaatt-cttagttttggttagagaaaagttgtgtaaactaccgacaacaggctgaaatcgtcggggatggatt 126  Q
    ||||| || ||| |||||| ||||| |||| | ||||||||||||||||||||||||| ||| | ||||| ||||||||||||||||| ||| | |||||    
T  27652347 cctgacaatgtaaagtcaatgaacaagtaaatgcttagttttggttagagaaaagttgcgtatattaccggcaacaggctgaaatcgttgggaaaggatt 27652446  T
Q  127 ctccatgttcaactttatgagagagaatgttatttaaaaaagggggatagggagattgaaggaagatgttagaaatatcactt 209  Q
    ||| |||||||| || |||||||| |||||| ||| ||| | ||||||||||||||| | || |||| ||||||| |||||||    
T  27652447 ctctatgttcaa-ttaatgagagaaaatgttgttt-aaacatggggatagggagattaagggtagatattagaaacatcactt 27652527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 466 - 538
Target Start/End: Complemental strand, 27079226 - 27079154
Alignment:
Q  466 tctcatcatttgaaaaacttctccaactagaaacaacaaatttttaattgactatatacagaaattaatcaac 538  Q
    ||||||||||| |||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  27079226 tctcatcatttaaaaaacttgtccaactagaaacaacaaatttgtaattgaatatatacagaaattaatcaac 27079154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 598 - 656
Target Start/End: Complemental strand, 25583263 - 25583205
Alignment:
Q  598 gacctagaccaaggaatgtacccaacatctttctttcatcttgtgcactgcttaatatt 656  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25583263 gacctaaaccaaggaatgtacccaacatctttctttcatcttgtgcactgcttaatatt 25583205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 447 - 542
Target Start/End: Original strand, 27661809 - 27661904
Alignment:
Q  447 cacaaaatattacatcatgtctcatcatttgaaaaacttctccaactagaaacaacaaatttttaattgactatatacagaaattaatcaacattt 542  Q
    |||| ||| |||||||||||||||| |||| |  |||||||||| ||| ||||||  ||||| |||||||||||||||||||||||||||| ||||    
T  27661809 cacataatcttacatcatgtctcatgatttaagcaacttctccatctataaacaatgaatttgtaattgactatatacagaaattaatcaatattt 27661904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 60 - 163
Target Start/End: Complemental strand, 31291401 - 31291298
Alignment:
Q  60 cttagttttggttagagaaaagttgtgtaaactaccgacaacaggctgaaatcgtcggggatggattctccatgttcaactttatgagagagaatgttat 159  Q
    ||||||||| ||||||||||||||| ||||| ||||||| |||||||||| || ||  | ||| ||||| ||||||||| |||||| ||||||||||| |    
T  31291401 cttagtttttgttagagaaaagttgcgtaaattaccgactacaggctgaattcatcaagaatgcattcttcatgttcaattttatgggagagaatgttgt 31291302  T
Q  160 ttaa 163  Q
    ||||    
T  31291301 ttaa 31291298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 322 - 402
Target Start/End: Complemental strand, 26627010 - 26626929
Alignment:
Q  322 atcgtattggtgttggacacagacacatgttggataccaa-catgctttcaatgagaagtgtttgtgctacaaagcatcctc 402  Q
    ||||| ||||||||| |||| ||||||||||| ||||||  ||||| ||||||||||||||||||| |||||||||||||||    
T  26627010 atcgtgttggtgttgtacacggacacatgttgcataccagtcatgccttcaatgagaagtgtttgttctacaaagcatcctc 26626929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 322 - 402
Target Start/End: Complemental strand, 26732987 - 26732906
Alignment:
Q  322 atcgtattggtgttggacacagacacatgttggataccaa-catgctttcaatgagaagtgtttgtgctacaaagcatcctc 402  Q
    ||||| ||||||||| |||| ||||||||||| ||||||  ||||| ||||||||||||||||||| |||||||||||||||    
T  26732987 atcgtgttggtgttgtacacggacacatgttgcataccagtcatgccttcaatgagaagtgtttgttctacaaagcatcctc 26732906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 542 - 635
Target Start/End: Complemental strand, 26852449 - 26852366
Alignment:
Q  542 tgtaaacagcaaaccacaaacctccattgttgagattgagagttggctttatgatggacctagaccaaggaatgtacccaacatctttctttca 635  Q
    |||||||||||||||||||||||||| |||||||||||||||||  ||||||          ||||||||||||||||| ||||||||||||||    
T  26852449 tgtaaacagcaaaccacaaacctccaatgttgagattgagagttaactttat----------gaccaaggaatgtaccctacatctttctttca 26852366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 704 - 758
Target Start/End: Complemental strand, 27682583 - 27682529
Alignment:
Q  704 gaatgtaccacatgtctttctttgttcctctttcgtcaaatcctgttgttgcaat 758  Q
    ||||||||| |||||||||||||||||||||||| |||| |||||||||||||||    
T  27682583 gaatgtaccccatgtctttctttgttcctctttcatcaattcctgttgttgcaat 27682529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 515 - 583
Target Start/End: Complemental strand, 25986842 - 25986776
Alignment:
Q  515 gactatatacagaaattaatcaacatttgtaaacagcaaaccacaaacctccattgttgagattgagag 583  Q
    |||||||||||||||||||||||||||  || ||| |||| ||||||||| || |||||||||||||||    
T  25986842 gactatatacagaaattaatcaacatt--tatacaacaaagcacaaacctgcaatgttgagattgagag 25986776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 61 - 150
Target Start/End: Complemental strand, 26890089 - 26890000
Alignment:
Q  61 ttagttttggttagagaaaagttgtgtaaactaccgacaacaggctgaaatcgtcggggatggattctccatgttcaactttatgagaga 150  Q
    |||||||||||||||||||||||||| |||  ||| ||||||||||||| || ||||   | |||||| |||||| || |||||||||||    
T  26890089 ttagttttggttagagaaaagttgtgcaaataaccaacaacaggctgaattcatcggcacttgattcttcatgtttaattttatgagaga 26890000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 688 - 757
Target Start/End: Complemental strand, 27079057 - 27078988
Alignment:
Q  688 atgcacctagactaaggaatgtaccacatgtctttctttgttcctctttcgtcaaatcctgttgttgcaa 757  Q
    |||||||||||| |||||||||||| ||||||||||||| |||| ||||  |||| |||| |||||||||    
T  27079057 atgcacctagacaaaggaatgtaccccatgtctttctttcttccacttttatcaattccttttgttgcaa 27078988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 588 - 629
Target Start/End: Original strand, 27423938 - 27423979
Alignment:
Q  588 ctttatgatggacctagaccaaggaatgtacccaacatcttt 629  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  27423938 ctttatgatgaacctagaccaaggaatgtacccaacatcttt 27423979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 220 - 274
Target Start/End: Complemental strand, 26629222 - 26629167
Alignment:
Q  220 tgatataagatgaagtttgtatctaatttgacctg-tggacaaaagctacatattt 274  Q
    |||||||||||||| |||||||||||||||||||| |||||||||| |||| ||||    
T  26629222 tgatataagatgaaatttgtatctaatttgacctgttggacaaaagatacagattt 26629167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 222 - 280
Target Start/End: Complemental strand, 26639961 - 26639902
Alignment:
Q  222 atataagatgaagtttgtatctaatttgacctg-tggacaaaagctacatatttacatta 280  Q
    |||||||||||||| |||||||||||||||||| ||||| ||||| ||| ||||||||||    
T  26639961 atataagatgaagtgtgtatctaatttgacctgttggacgaaagcaacacatttacatta 26639902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 220 - 255
Target Start/End: Complemental strand, 26650716 - 26650681
Alignment:
Q  220 tgatataagatgaagtttgtatctaatttgacctgt 255  Q
    ||||||||||||||||||||||||||||||||||||    
T  26650716 tgatataagatgaagtttgtatctaatttgacctgt 26650681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 220 - 274
Target Start/End: Complemental strand, 26735198 - 26735143
Alignment:
Q  220 tgatataagatgaagtttgtatctaatttgacctg-tggacaaaagctacatattt 274  Q
    |||||||||||||| |||||||||||||||||||| |||||||||| |||| ||||    
T  26735198 tgatataagatgaaatttgtatctaatttgacctgttggacaaaagatacagattt 26735143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 222 - 280
Target Start/End: Complemental strand, 26745927 - 26745868
Alignment:
Q  222 atataagatgaagtttgtatctaatttgacctg-tggacaaaagctacatatttacatta 280  Q
    |||||||||||||| |||||||||||||||||| ||||| ||||| ||| ||||||||||    
T  26745927 atataagatgaagtgtgtatctaatttgacctgttggacgaaagcaacacatttacatta 26745868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 220 - 255
Target Start/End: Complemental strand, 26756684 - 26756649
Alignment:
Q  220 tgatataagatgaagtttgtatctaatttgacctgt 255  Q
    ||||||||||||||||||||||||||||||||||||    
T  26756684 tgatataagatgaagtttgtatctaatttgacctgt 26756649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 374 - 445
Target Start/End: Complemental strand, 26889027 - 26888957
Alignment:
Q  374 gagaagtgtttgtgctacaaagcatcctcaaatgtaaattgaaacaatattttaagattgcacaaacatcat 445  Q
    ||||||||| |||||||||||||||| || |  |||||||||||||||||||| ||| ||||||||| ||||    
T  26889027 gagaagtgtatgtgctacaaagcatcttccacagtaaattgaaacaatatttt-agactgcacaaacttcat 26888957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 220 - 255
Target Start/End: Complemental strand, 26963957 - 26963922
Alignment:
Q  220 tgatataagatgaagtttgtatctaatttgacctgt 255  Q
    ||||||||||||||||||||||||||||||||||||    
T  26963957 tgatataagatgaagtttgtatctaatttgacctgt 26963922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 220 - 274
Target Start/End: Original strand, 27423010 - 27423065
Alignment:
Q  220 tgatataagatgaagtttgtatctaatttgacctg-tggacaaaagctacatattt 274  Q
    |||||||||||||||||||||||||| |||||||| |||||||||| |||| ||||    
T  27423010 tgatataagatgaagtttgtatctaaattgacctgttggacaaaagatacacattt 27423065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 607 - 657
Target Start/End: Original strand, 27662009 - 27662059
Alignment:
Q  607 caaggaatgtacccaacatctttctttcatcttgtgcactgcttaatattt 657  Q
    |||||||||||||| |||| ||||||||||||||| ||||| |||||||||    
T  27662009 caaggaatgtaccccacatatttctttcatcttgtccactgtttaatattt 27662059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 684 - 723
Target Start/End: Complemental strand, 26852297 - 26852258
Alignment:
Q  684 tttgatgcacctagactaaggaatgtaccacatgtctttc 723  Q
    ||||||||||||||||||||||||||||| || |||||||    
T  26852297 tttgatgcacctagactaaggaatgtaccccaagtctttc 26852258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 280
Target Start/End: Original strand, 27506847 - 27506910
Alignment:
Q  218 tatgatataagatgaagtttgtatctaatttgacctg-tggacaaaagctacatatttacatta 280  Q
    |||||||||||||||||||| |||||||||| || || |||||||||||||   ||||||||||    
T  27506847 tatgatataagatgaagtttctatctaatttcacttgttggacaaaagctatccatttacatta 27506910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 90
Target Start/End: Original strand, 27714193 - 27714256
Alignment:
Q  28 cctgataaagtacagtcaaagaacaggtaatt-cttagttttggttagagaaaagttgtgtaaa 90  Q
    ||||| || |||||||||||||||| | || | ||||||||||||||||||||||||| |||||    
T  27714193 cctgacaatgtacagtcaaagaacaagaaaatacttagttttggttagagaaaagttgcgtaaa 27714256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 504 - 542
Target Start/End: Complemental strand, 25514536 - 25514498
Alignment:
Q  504 aatttttaattgactatatacagaaattaatcaacattt 542  Q
    ||||| ||| |||||||||||||||||||||||||||||    
T  25514536 aatttgtaactgactatatacagaaattaatcaacattt 25514498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 504 - 542
Target Start/End: Complemental strand, 26146696 - 26146658
Alignment:
Q  504 aatttttaattgactatatacagaaattaatcaacattt 542  Q
    ||||| ||| |||||||||||||||||||||||||||||    
T  26146696 aatttgtaactgactatatacagaaattaatcaacattt 26146658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 331 - 424
Target Start/End: Complemental strand, 26806348 - 26806255
Alignment:
Q  331 gtgttggacacagacacatgttggatacca-acatgctttcaatgagaagtgtttgtgctacaaagcatcctcaaatgtaaattgaaacaatatt 424  Q
    |||||| | ||| |||||||||||  |||| |||||||| ||| | ||||||||||||||||||| |||||||||   |||||| ||||||||||    
T  26806348 gtgttgaaaacaaacacatgttgggcaccagacatgctt-caacgggaagtgtttgtgctacaaaacatcctcaacattaaattcaaacaatatt 26806255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 373 - 427
Target Start/End: Original strand, 27423823 - 27423877
Alignment:
Q  373 tgagaagtgtttgtgctacaaagcatcctcaaatgtaaattgaaacaatatttta 427  Q
    |||||||||| ||||||||||||||||||| |  |||| ||||| ||||||||||    
T  27423823 tgagaagtgtatgtgctacaaagcatcctccacagtaagttgaagcaatatttta 27423877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 724 - 758
Target Start/End: Original strand, 27715092 - 27715126
Alignment:
Q  724 tttgttcctctttcgtcaaatcctgttgttgcaat 758  Q
    ||||||||||||||||||||||||| |||||||||    
T  27715092 tttgttcctctttcgtcaaatcctgctgttgcaat 27715126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 542 - 583
Target Start/End: Complemental strand, 27079126 - 27079085
Alignment:
Q  542 tgtaaacagcaaaccacaaacctccattgttgagattgagag 583  Q
    ||||||||||||| ||||||||| || |||||||||||||||    
T  27079126 tgtaaacagcaaagcacaaaccttcaatgttgagattgagag 27079085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 1e-24; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 692 - 758
Target Start/End: Original strand, 29270364 - 29270430
Alignment:
Q  692 acctagactaaggaatgtaccacatgtctttctttgttcctctttcgtcaaatcctgttgttgcaat 758  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  29270364 acctagactaaggtatgtaccccatgtctttctttgttcctctttcgtcaaatcctgttgttgcaat 29270430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 90
Target Start/End: Original strand, 29270086 - 29270149
Alignment:
Q  28 cctgataaagtacagtcaaagaacaggtaatt-cttagttttggttagagaaaagttgtgtaaa 90  Q
    ||||| || |||||||||||||||| | || | ||||||||||||||||||||||||| |||||    
T  29270086 cctgacaatgtacagtcaaagaacaagaaaatacttagttttggttagagaaaagttgcgtaaa 29270149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 38; Significance: 0.000000000005; HSPs: 3)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 588 - 629
Target Start/End: Complemental strand, 63425 - 63384
Alignment:
Q  588 ctttatgatggacctagaccaaggaatgtacccaacatcttt 629  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  63425 ctttatgatgaacctagaccaaggaatgtacccaacatcttt 63384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 220 - 274
Target Start/End: Complemental strand, 64353 - 64298
Alignment:
Q  220 tgatataagatgaagtttgtatctaatttgacctg-tggacaaaagctacatattt 274  Q
    |||||||||||||||||||||||||| |||||||| |||||||||| |||| ||||    
T  64353 tgatataagatgaagtttgtatctaaattgacctgttggacaaaagatacacattt 64298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 373 - 427
Target Start/End: Complemental strand, 63540 - 63486
Alignment:
Q  373 tgagaagtgtttgtgctacaaagcatcctcaaatgtaaattgaaacaatatttta 427  Q
    |||||||||| ||||||||||||||||||| |  |||| ||||| ||||||||||    
T  63540 tgagaagtgtatgtgctacaaagcatcctccacagtaagttgaagcaatatttta 63486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.00000000002; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 100
Target Start/End: Original strand, 18692521 - 18692561
Alignment:
Q  60 cttagttttggttagagaaaagttgtgtaaactaccgacaa 100  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  18692521 cttagttttggttagagaaaagttgtgtaaattaccgacaa 18692561  T

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Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 100
Target Start/End: Original strand, 18719020 - 18719060
Alignment:
Q  60 cttagttttggttagagaaaagttgtgtaaactaccgacaa 100  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  18719020 cttagttttggttagagaaaagttgtgtaaattaccgacaa 18719060  T

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Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 60 - 100
Target Start/End: Original strand, 18674450 - 18674490
Alignment:
Q  60 cttagttttggttagagaaaagttgtgtaaactaccgacaa 100  Q
    ||||||||||||||||||||||||||||||| |||| ||||    
T  18674450 cttagttttggttagagaaaagttgtgtaaattaccaacaa 18674490  T

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Target: scaffold0349 (Bit Score: 32; Significance: 0.00000002; HSPs: 2)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 90
Target Start/End: Complemental strand, 17751 - 17688
Alignment:
Q  28 cctgataaagtacagtcaaagaacaggtaatt-cttagttttggttagagaaaagttgtgtaaa 90  Q
    ||||| || |||||||||||||||| | || | ||||||||||||||||||||||||| |||||    
T  17751 cctgacaatgtacagtcaaagaacaagaaaatacttagttttggttagagaaaagttgcgtaaa 17688  T

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Target: scaffold0349; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 724 - 758
Target Start/End: Complemental strand, 16852 - 16818
Alignment:
Q  724 tttgttcctctttcgtcaaatcctgttgttgcaat 758  Q
    ||||||||||||||||||||||||| |||||||||    
T  16852 tttgttcctctttcgtcaaatcctgctgttgcaat 16818  T

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Target: chr1 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 454 - 515
Target Start/End: Complemental strand, 26140203 - 26140142
Alignment:
Q  454 tattacatcatgtctcatcatttgaaaaacttctccaactagaaacaacaaatttttaattg 515  Q
    |||||||||| |||||||||||| ||||||||||| | ||||||| ||  ||||| ||||||    
T  26140203 tattacatcaggtctcatcatttcaaaaacttctctagctagaaataatgaatttgtaattg 26140142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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