View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17751_high_13 (Length: 238)
Name: NF17751_high_13
Description: NF17751
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17751_high_13 |
 | |
|
Alignment Details
Target: chr4 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 17 - 215
Target Start/End: Complemental strand, 32619938 - 32619740
Alignment:
| Q |
17 |
cattcttgcaaaaatggaatgatacactcctctaaacgaaggcacatgtctttattcaacttagaagtggttgaaagatatttagtttatcataaacttt |
116 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32619938 |
cattcttgcaaaaatggaatgatacactcctctaaacgaagacacatgtctttattcaacttagaagtggttgaaagatatttagtttatcataaacttt |
32619839 |
T |
|
| Q |
117 |
gataactttcattttagaaacttgtgtggaatttatttgaaggcatttaatgagaaaactcatgcttttgcaagaatatgcacatctctagctttattt |
215 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32619838 |
gataactttcattttagaaactcgtgtggaatttatttgaaggcattcaatgagaaaactcatgcttttgcaagaatatgcacatctctagctttattt |
32619740 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University