View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17751_low_13 (Length: 266)
Name: NF17751_low_13
Description: NF17751
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17751_low_13 |
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Alignment Details
Target: chr4 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 129 - 254
Target Start/End: Complemental strand, 39292209 - 39292080
Alignment:
| Q |
129 |
taatgttttaaatgaatctcaattactcaaatcttgaaagtttacacataaagatgtattaattaattaat----gacatacacgattgatgttgtaaaa |
224 |
Q |
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| T |
39292209 |
taatgttttaaatgaatctcaattactcatatcttcaaagtttacacataaagatgtattaattaattaattaatgacatacacgattgatgttgtaaaa |
39292110 |
T |
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| Q |
225 |
caggtatatgatggctacacccggtgatga |
254 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
39292109 |
caggtatatgatggctacacccggtgatga |
39292080 |
T |
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