View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17751_low_18 (Length: 219)

Name: NF17751_low_18
Description: NF17751
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17751_low_18
NF17751_low_18
[»] chr4 (55 HSPs)
chr4 (20-123)||(46442014-46442117)
chr4 (20-120)||(36073519-36073619)
chr4 (20-123)||(53123201-53123304)
chr4 (20-121)||(44893007-44893108)
chr4 (20-120)||(44893596-44893696)
chr4 (20-123)||(36073121-36073224)
chr4 (20-123)||(49387679-49387782)
chr4 (20-118)||(9089040-9089138)
chr4 (20-122)||(22199429-22199531)
chr4 (20-122)||(47290236-47290338)
chr4 (20-120)||(33530479-33530579)
chr4 (20-123)||(4751617-4751720)
chr4 (20-122)||(31078612-31078714)
chr4 (21-121)||(10442581-10442682)
chr4 (20-121)||(21802114-21802215)
chr4 (20-123)||(2625007-2625110)
chr4 (20-123)||(24128409-24128512)
chr4 (20-121)||(7744906-7745007)
chr4 (20-121)||(50156373-50156473)
chr4 (20-110)||(23964269-23964359)
chr4 (23-122)||(11314044-11314144)
chr4 (20-122)||(37219801-37219904)
chr4 (20-118)||(17655600-17655699)
chr4 (44-116)||(33530676-33530749)
chr4 (30-118)||(24392854-24392942)
chr4 (54-120)||(25063369-25063436)
chr4 (44-116)||(10442777-10442850)
chr4 (20-89)||(30563379-30563448)
chr4 (44-116)||(31078807-31078880)
chr4 (44-116)||(49387876-49387949)
chr4 (22-120)||(42671840-42671939)
chr4 (20-121)||(37934735-37934837)
chr4 (44-116)||(2624841-2624914)
chr4 (44-116)||(7745100-7745173)
chr4 (44-116)||(21802310-21802383)
chr4 (44-116)||(22199265-22199338)
chr4 (44-116)||(24392671-24392744)
chr4 (44-116)||(36072951-36073024)
chr4 (44-116)||(46441848-46441921)
chr4 (44-116)||(47290070-47290143)
chr4 (44-116)||(53123034-53123108)
chr4 (44-116)||(4751450-4751523)
chr4 (44-116)||(24128243-24128316)
chr4 (28-120)||(36073256-36073349)
chr4 (44-116)||(36073354-36073427)
chr4 (28-119)||(44744610-44744698)
chr4 (44-116)||(44893430-44893503)
chr4 (44-114)||(42671675-42671746)
chr4 (44-90)||(17655461-17655507)
chr4 (44-89)||(9088902-9088947)
chr4 (44-108)||(23964453-23964518)
chr4 (44-116)||(50156566-50156639)
chr4 (44-107)||(36073731-36073795)
chr4 (44-116)||(44893201-44893275)
chr4 (44-116)||(37934929-37935002)
[»] chr3 (46 HSPs)
chr3 (20-123)||(3137206-3137309)
chr3 (20-123)||(34482680-34482783)
chr3 (20-123)||(37216845-37216948)
chr3 (20-122)||(22426138-22426240)
chr3 (20-122)||(33113964-33114066)
chr3 (20-120)||(30385570-30385670)
chr3 (20-120)||(37522223-37522323)
chr3 (20-123)||(6042047-6042150)
chr3 (20-119)||(8320378-8320477)
chr3 (20-120)||(3089589-3089689)
chr3 (20-120)||(19650695-19650795)
chr3 (20-123)||(3456234-3456337)
chr3 (20-118)||(33145882-33145980)
chr3 (20-120)||(2754889-2754989)
chr3 (20-120)||(3574321-3574421)
chr3 (20-122)||(48161076-48161178)
chr3 (30-124)||(40328011-40328106)
chr3 (20-120)||(47738281-47738382)
chr3 (28-122)||(36864825-36864920)
chr3 (30-123)||(8361831-8361924)
chr3 (20-120)||(26612916-26613017)
chr3 (20-119)||(46919064-46919164)
chr3 (42-121)||(41224426-41224505)
chr3 (20-118)||(42921295-42921394)
chr3 (30-120)||(9796824-9796914)
chr3 (20-108)||(33839705-33839794)
chr3 (21-120)||(24343720-24343820)
chr3 (44-116)||(2754721-2754794)
chr3 (44-116)||(3137402-3137475)
chr3 (44-116)||(3574515-3574588)
chr3 (44-116)||(6041888-6041961)
chr3 (44-108)||(9797017-9797082)
chr3 (44-116)||(33145717-33145789)
chr3 (31-105)||(41883031-41883106)
chr3 (44-89)||(8362033-8362078)
chr3 (44-116)||(11347272-11347345)
chr3 (44-116)||(37217041-37217114)
chr3 (20-120)||(42298032-42298122)
chr3 (44-108)||(47738117-47738182)
chr3 (44-108)||(19650888-19650953)
chr3 (44-116)||(30385015-30385088)
chr3 (44-116)||(34482898-34482971)
chr3 (44-89)||(41883211-41883256)
chr3 (44-108)||(22426332-22426397)
chr3 (44-108)||(26612797-26612862)
chr3 (160-193)||(41392749-41392782)
[»] scaffold0228 (5 HSPs)
scaffold0228 (20-122)||(26106-26208)
scaffold0228 (20-122)||(16154-16256)
scaffold0228 (44-108)||(8414-8479)
scaffold0228 (44-108)||(15996-16061)
scaffold0228 (44-108)||(25948-26013)
[»] chr1 (41 HSPs)
chr1 (20-122)||(51737675-51737777)
chr1 (20-122)||(36966501-36966603)
chr1 (20-122)||(41876235-41876337)
chr1 (20-121)||(19015574-19015675)
chr1 (20-120)||(9910086-9910186)
chr1 (20-120)||(37821629-37821729)
chr1 (20-122)||(20304923-20305025)
chr1 (20-120)||(6883657-6883757)
chr1 (20-124)||(18404618-18404722)
chr1 (20-120)||(25973577-25973677)
chr1 (20-119)||(40215158-40215257)
chr1 (20-120)||(25463846-25463946)
chr1 (20-123)||(44094867-44094970)
chr1 (20-120)||(3559787-3559887)
chr1 (44-120)||(19722894-19722970)
chr1 (30-122)||(33786424-33786516)
chr1 (30-120)||(32000061-32000151)
chr1 (30-118)||(40273888-40273976)
chr1 (23-118)||(44690818-44690914)
chr1 (20-122)||(10167569-10167672)
chr1 (44-117)||(33786623-33786696)
chr1 (44-116)||(16045786-16045859)
chr1 (44-116)||(40214992-40215065)
chr1 (44-116)||(40273706-40273779)
chr1 (44-116)||(18404446-18404519)
chr1 (44-116)||(25463680-25463753)
chr1 (44-116)||(44094702-44094775)
chr1 (28-123)||(27523047-27523143)
chr1 (48-119)||(52064373-52064445)
chr1 (44-116)||(6883491-6883564)
chr1 (44-116)||(9910281-9910354)
chr1 (44-116)||(19015408-19015481)
chr1 (44-116)||(32000255-32000328)
chr1 (44-116)||(36966696-36966769)
chr1 (44-116)||(37821822-37821895)
chr1 (28-82)||(52329453-52329507)
chr1 (44-116)||(3559621-3559694)
chr1 (160-196)||(2606785-2606821)
chr1 (160-193)||(9411249-9411282)
chr1 (48-116)||(41876434-41876503)
chr1 (28-120)||(22157333-22157425)
[»] chr8 (59 HSPs)
chr8 (20-121)||(26041907-26042008)
chr8 (20-121)||(40779923-40780024)
chr8 (20-120)||(17841645-17841745)
chr8 (20-120)||(6108028-6108128)
chr8 (26-121)||(1503637-1503732)
chr8 (20-119)||(14129029-14129128)
chr8 (20-121)||(32064916-32065017)
chr8 (20-121)||(37985850-37985951)
chr8 (20-120)||(3596836-3596936)
chr8 (20-120)||(10044518-10044618)
chr8 (20-120)||(25581034-25581134)
chr8 (20-120)||(42754837-42754937)
chr8 (20-122)||(1645757-1645859)
chr8 (20-118)||(24211169-24211267)
chr8 (20-121)||(15187730-15187831)
chr8 (20-118)||(20091598-20091696)
chr8 (20-118)||(34665551-34665649)
chr8 (21-118)||(38017103-38017201)
chr8 (20-120)||(30055686-30055786)
chr8 (20-108)||(35353211-35353299)
chr8 (40-122)||(31347569-31347651)
chr8 (21-118)||(37132477-37132575)
chr8 (20-109)||(39772608-39772697)
chr8 (20-95)||(8454003-8454078)
chr8 (20-108)||(32394027-32394114)
chr8 (28-117)||(3890412-3890502)
chr8 (33-121)||(30834849-30834938)
chr8 (30-122)||(7022159-7022251)
chr8 (44-116)||(32064749-32064822)
chr8 (44-116)||(34665386-34665459)
chr8 (30-124)||(7017649-7017743)
chr8 (44-116)||(17841838-17841911)
chr8 (44-116)||(20091789-20091862)
chr8 (20-120)||(24844655-24844756)
chr8 (44-116)||(31347770-31347843)
chr8 (44-116)||(40780117-40780190)
chr8 (28-89)||(41819594-41819655)
chr8 (44-108)||(42755030-42755095)
chr8 (44-115)||(25581227-25581299)
chr8 (44-117)||(24844847-24844920)
chr8 (44-116)||(7017853-7017926)
chr8 (44-108)||(7021990-7022055)
chr8 (44-116)||(8453838-8453911)
chr8 (44-116)||(14128868-14128941)
chr8 (44-116)||(15187564-15187637)
chr8 (44-116)||(26042104-26042177)
chr8 (44-116)||(27782105-27782178)
chr8 (44-116)||(32393862-32393935)
chr8 (44-116)||(35353045-35353118)
chr8 (44-116)||(37986043-37986116)
chr8 (44-108)||(30835035-30835099)
chr8 (53-108)||(38016983-38017039)
chr8 (51-89)||(3890611-3890649)
chr8 (44-108)||(6108221-6108286)
chr8 (44-116)||(27835441-27835514)
chr8 (44-108)||(39772789-39772854)
chr8 (58-108)||(1886621-1886672)
chr8 (55-116)||(37132657-37132719)
chr8 (44-89)||(3817918-3817963)
[»] chr5 (39 HSPs)
chr5 (20-121)||(4892372-4892473)
chr5 (20-120)||(33584124-33584224)
chr5 (20-122)||(25398408-25398510)
chr5 (20-121)||(3521801-3521902)
chr5 (20-120)||(6043307-6043407)
chr5 (20-120)||(8145543-8145643)
chr5 (20-117)||(12850972-12851069)
chr5 (20-121)||(37321587-37321688)
chr5 (20-121)||(14138837-14138938)
chr5 (20-120)||(2477806-2477906)
chr5 (20-119)||(3362949-3363048)
chr5 (20-120)||(38899520-38899621)
chr5 (20-121)||(12614531-12614633)
chr5 (30-120)||(22912852-22912942)
chr5 (20-99)||(11360947-11361026)
chr5 (20-78)||(4433845-4433903)
chr5 (30-121)||(17545476-17545567)
chr5 (44-116)||(22913042-22913115)
chr5 (44-116)||(2477640-2477713)
chr5 (44-116)||(6043499-6043572)
chr5 (44-108)||(8145387-8145452)
chr5 (44-116)||(11361119-11361192)
chr5 (49-108)||(10458409-10458469)
chr5 (44-116)||(3362782-3362855)
chr5 (44-116)||(4433995-4434068)
chr5 (44-116)||(4892206-4892279)
chr5 (44-116)||(12614721-12614794)
chr5 (44-89)||(17545673-17545718)
chr5 (44-116)||(25398242-25398315)
chr5 (44-116)||(38899714-38899787)
chr5 (27-82)||(13664736-13664791)
chr5 (44-108)||(3521994-3522059)
chr5 (44-116)||(12850805-12850878)
chr5 (44-116)||(33584317-33584390)
chr5 (44-103)||(27482017-27482077)
chr5 (44-116)||(37321781-37321855)
chr5 (20-89)||(31640767-31640836)
chr5 (44-89)||(31640928-31640973)
chr5 (90-118)||(12614483-12614511)
[»] chr2 (37 HSPs)
chr2 (20-120)||(33380377-33380477)
chr2 (20-120)||(35160929-35161029)
chr2 (20-120)||(10662058-10662158)
chr2 (20-120)||(23267857-23267957)
chr2 (20-122)||(13355018-13355120)
chr2 (20-120)||(7475303-7475403)
chr2 (20-120)||(9293370-9293470)
chr2 (20-116)||(3989246-3989342)
chr2 (20-117)||(31174633-31174730)
chr2 (20-122)||(22592880-22592985)
chr2 (30-121)||(43331092-43331183)
chr2 (30-120)||(9723586-9723677)
chr2 (20-79)||(21936252-21936311)
chr2 (30-118)||(21393483-21393570)
chr2 (44-116)||(14941354-14941427)
chr2 (30-123)||(34320960-34321042)
chr2 (44-116)||(9293564-9293637)
chr2 (44-116)||(10661891-10661964)
chr2 (20-89)||(16767288-16767357)
chr2 (44-116)||(21936085-21936158)
chr2 (44-116)||(23268050-23268123)
chr2 (44-108)||(31174822-31174887)
chr2 (44-116)||(35160761-35160834)
chr2 (75-120)||(39819272-39819317)
chr2 (44-116)||(43330916-43330989)
chr2 (20-80)||(14941199-14941259)
chr2 (44-116)||(7475496-7475569)
chr2 (44-108)||(13354858-13354923)
chr2 (44-116)||(21393676-21393749)
chr2 (44-108)||(27847644-27847709)
chr2 (44-116)||(33380211-33380284)
chr2 (45-90)||(37335744-37335789)
chr2 (30-99)||(37335824-37335894)
chr2 (44-89)||(3989108-3989153)
chr2 (44-116)||(9723409-9723482)
chr2 (56-108)||(22591494-22591547)
chr2 (90-123)||(27847801-27847834)
[»] chr7 (38 HSPs)
chr7 (20-121)||(48880721-48880822)
chr7 (20-122)||(3962148-3962250)
chr7 (20-121)||(35445567-35445668)
chr7 (20-121)||(42611981-42612082)
chr7 (20-121)||(45637881-45637982)
chr7 (20-120)||(24395141-24395241)
chr7 (20-120)||(30848739-30848839)
chr7 (20-122)||(15329444-15329546)
chr7 (40-120)||(25167651-25167731)
chr7 (20-120)||(34483008-34483108)
chr7 (23-122)||(15577640-15577739)
chr7 (20-120)||(35876414-35876514)
chr7 (20-118)||(4974532-4974630)
chr7 (28-121)||(42696261-42696355)
chr7 (30-119)||(37476876-37476965)
chr7 (20-111)||(29737314-29737406)
chr7 (40-122)||(18037167-18037249)
chr7 (30-121)||(15238564-15238655)
chr7 (44-116)||(4974723-4974796)
chr7 (44-116)||(42611815-42611888)
chr7 (44-116)||(45637716-45637789)
chr7 (47-116)||(15577841-15577911)
chr7 (44-116)||(15329277-15329350)
chr7 (44-116)||(34482839-34482912)
chr7 (44-116)||(48880915-48880988)
chr7 (23-118)||(20009895-20009991)
chr7 (44-89)||(15238414-15238459)
chr7 (44-116)||(24394976-24395049)
chr7 (44-116)||(35444562-35444635)
chr7 (55-116)||(37477079-37477141)
chr7 (54-120)||(40880641-40880706)
chr7 (44-116)||(3961983-3962056)
chr7 (44-108)||(18036990-18037055)
chr7 (44-116)||(25167838-25167911)
chr7 (44-116)||(29737143-29737216)
chr7 (56-120)||(36790271-36790336)
chr7 (44-116)||(36790454-36790527)
chr7 (160-193)||(33342272-33342305)
[»] chr6 (33 HSPs)
chr6 (20-123)||(33696867-33696970)
chr6 (20-122)||(32702375-32702477)
chr6 (20-120)||(17175816-17175916)
chr6 (20-120)||(18365369-18365469)
chr6 (20-120)||(18370633-18370733)
chr6 (20-123)||(23290873-23290976)
chr6 (20-122)||(28675318-28675420)
chr6 (20-120)||(33695121-33695221)
chr6 (20-122)||(17705262-17705363)
chr6 (20-120)||(2309218-2309318)
chr6 (23-118)||(6031537-6031632)
chr6 (20-123)||(29693615-29693719)
chr6 (30-123)||(11548381-11548474)
chr6 (20-82)||(18889477-18889539)
chr6 (20-79)||(6127447-6127506)
chr6 (44-116)||(33695315-33695388)
chr6 (44-116)||(33696700-33696773)
chr6 (54-119)||(34238883-34238948)
chr6 (42-120)||(582522-582602)
chr6 (44-116)||(6127279-6127352)
chr6 (44-116)||(23291072-23291145)
chr6 (44-114)||(11548576-11548647)
chr6 (54-116)||(25986934-25986997)
chr6 (44-116)||(17176009-17176082)
chr6 (44-116)||(17705453-17705526)
chr6 (44-116)||(18365561-18365634)
chr6 (44-116)||(18370825-18370898)
chr6 (44-116)||(28675152-28675225)
chr6 (44-116)||(18889685-18889757)
chr6 (66-120)||(2121004-2121059)
chr6 (44-89)||(9752233-9752278)
chr6 (54-116)||(8515723-8515786)
chr6 (44-108)||(32702217-32702282)
[»] scaffold0204 (2 HSPs)
scaffold0204 (20-120)||(4566-4666)
scaffold0204 (44-116)||(4400-4473)
[»] scaffold0178 (2 HSPs)
scaffold0178 (20-120)||(11791-11891)
scaffold0178 (44-116)||(11625-11698)
[»] scaffold0085 (2 HSPs)
scaffold0085 (20-120)||(48019-48119)
scaffold0085 (44-116)||(47854-47927)
[»] scaffold0471 (2 HSPs)
scaffold0471 (20-123)||(13012-13115)
scaffold0471 (44-116)||(12846-12919)
[»] scaffold0096 (2 HSPs)
scaffold0096 (20-120)||(41180-41280)
scaffold0096 (44-116)||(41015-41088)
[»] scaffold0665 (1 HSPs)
scaffold0665 (44-116)||(3072-3145)
[»] scaffold0041 (1 HSPs)
scaffold0041 (54-120)||(85577-85642)


Alignment Details
Target: chr4 (Bit Score: 96; Significance: 3e-47; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 46442014 - 46442117
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46442014 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 46442113  T
Q  120 ctta 123  Q
    ||||    
T  46442114 ctta 46442117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 36073519 - 36073619
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36073519 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 36073618  T
Q  120 c 120  Q
    |    
T  36073619 c 36073619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 53123201 - 53123304
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53123201 atgaaagattaataaatgagactgaaatctaaagatgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 53123300  T
Q  120 ctta 123  Q
    ||||    
T  53123301 ctta 53123304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 20 - 121
Target Start/End: Complemental strand, 44893108 - 44893007
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  44893108 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 44893009  T
Q  120 ct 121  Q
    ||    
T  44893008 ct 44893007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 44893596 - 44893696
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  44893596 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 44893695  T
Q  120 c 120  Q
    |    
T  44893696 c 44893696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 36073121 - 36073224
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  36073121 atgaaagattaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttgaatttttcttataaaatcatttttgatatctagcattttc 36073220  T
Q  120 ctta 123  Q
    ||||    
T  36073221 ctta 36073224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 20 - 123
Target Start/End: Complemental strand, 49387782 - 49387679
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  49387782 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcatccttgatatctaacattttc 49387683  T
Q  120 ctta 123  Q
    ||||    
T  49387682 ctta 49387679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 20 - 118
Target Start/End: Original strand, 9089040 - 9089138
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcatttt 118  Q
    ||||||||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9089040 atgaaagattaataaatgagactgaaatctaaagatgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcatttt 9089138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 20 - 122
Target Start/End: Original strand, 22199429 - 22199531
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  22199429 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 22199528  T
Q  120 ctt 122  Q
    |||    
T  22199529 ctt 22199531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 20 - 122
Target Start/End: Original strand, 47290236 - 47290338
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    |||||||| |||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47290236 atgaaagaataataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 47290335  T
Q  120 ctt 122  Q
    |||    
T  47290336 ctt 47290338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 33530579 - 33530479
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||    
T  33530579 atgaaagattaataaataagactgaaatctaaaggtgattattgtgccatgtcattcttggatcttttttataaaatcattcttgatatctagcattttc 33530480  T
Q  120 c 120  Q
    |    
T  33530479 c 33530479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 4751617 - 4751720
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  4751617 atgaaagattaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttaaatttttcttataaaattattcttgatatctagcattttc 4751716  T
Q  120 ctta 123  Q
    ||||    
T  4751717 ctta 4751720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 20 - 122
Target Start/End: Complemental strand, 31078714 - 31078612
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | | |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  31078714 atgaaagattaataaatgagattgaaatctaaagatgattattgtgccatgtcattcttgaattttttttataaaatcattcttgatatctagcattttc 31078615  T
Q  120 ctt 122  Q
    |||    
T  31078614 ctt 31078612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 21 - 121
Target Start/End: Complemental strand, 10442682 - 10442581
Alignment:
Q  21 tgaaagattaa-taaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  10442682 tgaaagattaaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 10442583  T
Q  120 ct 121  Q
    ||    
T  10442582 ct 10442581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 20 - 121
Target Start/End: Complemental strand, 21802215 - 21802114
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | |||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  21802215 atgaaagattaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 21802116  T
Q  120 ct 121  Q
    ||    
T  21802115 ct 21802114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 2625007 - 2625110
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||| |||||||    
T  2625007 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcatttttgaatctttcttataaaatcattcttgatatctaacattttc 2625106  T
Q  120 ctta 123  Q
    ||||    
T  2625107 ctta 2625110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 24128409 - 24128512
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | |||||||||||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||     
T  24128409 atgaaagattaataaatgagactgaaatctaaaggtaattattgtgtcatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttt 24128508  T
Q  120 ctta 123  Q
    ||||    
T  24128509 ctta 24128512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 20 - 121
Target Start/End: Complemental strand, 7745007 - 7744906
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    |||||| |||||||||| | | ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  7745007 atgaaatattaataaatgagattgaaatctaaaggtgattattgtgcaatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 7744908  T
Q  120 ct 121  Q
    ||    
T  7744907 ct 7744906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 20 - 121
Target Start/End: Complemental strand, 50156473 - 50156373
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | |||||||||||| |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  50156473 atgaaagattaataaatgagactgaaatctaa-ggtgattattatgtcatgtcattcttgaatttttcttataaaatcattcttgatatctaacattttc 50156375  T
Q  120 ct 121  Q
    ||    
T  50156374 ct 50156373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 23964359 - 23964269
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatct 110  Q
    ||||||||||||||||| | | |||||||||||| |||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||    
T  23964359 atgaaagattaataaatgagattgaaatctaaagatgattattatgccatgtcattcttaaatctttcttataaaatcattcttgatatct 23964269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 23 - 122
Target Start/End: Complemental strand, 11314144 - 11314044
Alignment:
Q  23 aaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcct 121  Q
    |||| ||||||||||| |||  ||||||| ||||||||||||| ||||||||||||| || |||||| ||||||||||||||||||||||||||||||||    
T  11314144 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttgatatctagcattttcct 11314045  T
Q  122 t 122  Q
    |    
T  11314044 t 11314044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 20 - 122
Target Start/End: Original strand, 37219801 - 37219904
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatttt 118  Q
    ||||||| ||||||||||| | |||||||||| | |||||||| ||||||||||||||| ||| |||||| |||||||||||||||||||||| ||||||    
T  37219801 atgaaaggttaataaataagattgaaatctaaggatgattattctgccatgtcattcttaaatctttcttgataaaatcattcttgatatctaacatttt 37219900  T
Q  119 cctt 122  Q
    ||||    
T  37219901 cctt 37219904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 20 - 118
Target Start/End: Original strand, 17655600 - 17655699
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatttt 118  Q
    ||||||| ||||||||| | |||||||||||||||| |||||| || |||||||||||| ||| |||||| |||||||||||||| ||||||||||||||    
T  17655600 atgaaaggttaataaatgagactgaaatctaaaggtaattattatgtcatgtcattcttaaatctttcttgataaaatcattcttaatatctagcatttt 17655699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 33530676 - 33530749
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| |||||||||||||||||||||||||| |||||||| |||||||||| |||||||    
T  33530676 aaatctaagggtgattattctgccatgtcattcttgaatttttcttgataaaatctttcttgatatatagcatt 33530749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 24392854 - 24392942
Alignment:
Q  30 aataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcatttt 118  Q
    ||||||| | |||||||||||| | |||||||||||| ||||||||||| ||| ||||||   ||||||||||||||||||||||||||    
T  24392854 aataaatgagactgaaatctaaggatgattattgtgctatgtcattcttaaatatttcttgataaatcattcttgatatctagcatttt 24392942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 54 - 120
Target Start/End: Complemental strand, 25063436 - 25063369
Alignment:
Q  54 gtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 120  Q
    ||||||||| | ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  25063436 gtgattattctaccatgtcattcttgaatctttcttgataaaatcattcttgatatctagcattttcc 25063369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 10442777 - 10442850
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  10442777 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 10442850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 89
Target Start/End: Original strand, 30563379 - 30563448
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt 89  Q
    ||||||| ||||||||||| ||||||||||||  |||||||||||| |||||||||||||||| ||||||    
T  30563379 atgaaaggttaataaataagactgaaatctaagtgtgattattgtgtcatgtcattcttgaatctttctt 30563448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 31078807 - 31078880
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  31078807 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 31078880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 49387876 - 49387949
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  49387876 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 49387949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 22 - 120
Target Start/End: Original strand, 42671840 - 42671939
Alignment:
Q  22 gaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 120  Q
    ||||| |||| |||| | ||| ||||||||   |||||||| || |||||||||||||||| |||||| |||||||||||||||||||||| ||||||||    
T  42671840 gaaaggttaacaaatgagactcaaatctaagaatgattattatgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctaacattttcc 42671939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 121
Target Start/End: Complemental strand, 37934837 - 37934735
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatttt 118  Q
    ||||||| ||||||||| | | |||||||||| ||||||||||||| ||| ||||| |||||| |||||| ||||||||| || | ||||||| ||||||    
T  37934837 atgaaaggttaataaatgagattgaaatctaagggtgattattgtgtcatatcattattgaatctttcttaataaaatcagtcataatatctaacatttt 37934738  T
Q  119 cct 121  Q
    |||    
T  37934737 cct 37934735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 2624914 - 2624841
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| |||||| ||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  2624914 aaatctaagggtgattattctgccatttcattcttgaaattttcttgataaaatctttcttgatatatagcatt 2624841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 7745100 - 7745173
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  7745100 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 7745173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 21802310 - 21802383
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||  |||||||||| |||||||    
T  21802310 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcatt 21802383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 22199338 - 22199265
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| | |||||||| |||||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  22199338 aaatctaaggctgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 22199265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 24392744 - 24392671
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||| ||| |||||||||| |||||||||||||||||||||||||| | |||||| |||||||||| |||||||    
T  24392744 aaatttaagggtgattattctgccatgtcattcttgaatttttcttgagaaaatctttcttgatatatagcatt 24392671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 36073024 - 36072951
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||| ||||| |||||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  36073024 aaatctaagggtggttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 36072951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 46441921 - 46441848
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  46441921 aaatctaagggtgattattttgccatgtcattcttgaaattttcttaaaaaaatctttcttgatatatagcatt 46441848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 47290143 - 47290070
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  47290143 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 47290070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 53123108 - 53123034
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt--ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| |||||||||||||||||| |||||||  | |||||| |||||||||| |||||||    
T  53123108 aaatctaagggtgattattctgccatgtcattcttgaaattttctttgaaaaaatctttcttgatatatagcatt 53123034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 4751523 - 4751450
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||| ||||| |||||||||||||||| | ||||||| |||||||| |||||||||| |||||||    
T  4751523 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 4751450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 24128316 - 24128243
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| | |||||||| |||||||||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  24128316 aaatctaaggatgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 24128243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 120
Target Start/End: Complemental strand, 36073349 - 36073256
Alignment:
Q  28 ttaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 120  Q
    ||||||||||| ||||||||||||  || |||||| || ||| |||||||| ||| |||||| ||||||||||| ||  |||||||||||||||    
T  36073349 ttaataaataagactgaaatctaagagtaattattctggcatatcattcttaaatctttcttgataaaatcatttttagtatctagcattttcc 36073256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 36073427 - 36073354
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||| ||| |||||||||| |||||||||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  36073427 aaatttaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 36073354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 119
Target Start/End: Original strand, 44744610 - 44744698
Alignment:
Q  28 ttaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||| |||||||||||| | | ||||||| | |||||||||||||||| |   | ||||||||||| |||||||||| |||||||    
T  44744610 ttaataaataagactgaaatctaaggataattattgagtcatgtcattcttgaatct---tgataaaatcatttttgatatctaacattttc 44744698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 44893503 - 44893430
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttg-aatttttcttataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| |||||||||||||||| ||||||| | | |||||| |||||||||| |||||||    
T  44893503 aaatctaagggtgattattctgccatgtcattcttgaaatttttttgaaaaaatctttcttgatatatagcatt 44893430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 114
Target Start/End: Complemental strand, 42671746 - 42671675
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagca 114  Q
    |||||||| |||||||||| ||||||||||||||| ||||||| || |||||||| || ||||||| |||||    
T  42671746 aaatctaagggtgattattctgccatgtcattcttaaattttttttgataaaatctttattgatatatagca 42671675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 44 - 90
Target Start/End: Complemental strand, 17655507 - 17655461
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctta 90  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||||    
T  17655507 aaatctaagggtgattattctgccatgtcattcttgaaattttctta 17655461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 89
Target Start/End: Complemental strand, 9088947 - 9088902
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt 89  Q
    |||||||| |||||||||| |||||||||||||||||| |||||||    
T  9088947 aaatctaagggtgattattctgccatgtcattcttgaaattttctt 9088902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 108
Target Start/End: Original strand, 23964453 - 23964518
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattctt-gaatttttcttataaaatcattcttgatat 108  Q
    |||||||| |||||||||| |||||||||||||||  ||||||| | |||||||| ||||||||||    
T  23964453 aaatctaagggtgattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatat 23964518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 50156566 - 50156639
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| | |||||| ||||| |||| |||||||    
T  50156566 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttaatatatagcatt 50156639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 107
Target Start/End: Original strand, 36073731 - 36073795
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgata 107  Q
    ||||||||| ||||||||| || |||||||||||| ||| |||||| |||||||| |||||||||    
T  36073731 aaatctaaaagtgattattttgtcatgtcattcttaaatctttcttcataaaatctttcttgata 36073795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 44893201 - 44893275
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaa--tttttcttataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| ||||||||||||||||||  ||||| | | |||||| ||||| |||| |||||||    
T  44893201 aaatctaagggtgattattctgccatgtcattcttgaaattttttttgaaaaaatctttcttaatatatagcatt 44893275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 37934929 - 37935002
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttga-atttttcttataaaatcattcttgatatctagcatt 116  Q
    |||||||| ||||| |||| | ||||||||||||||| |||||| | |||||||| || ||||||| |||||||    
T  37934929 aaatctaagggtgagtattctaccatgtcattcttgacatttttttgataaaatcttttttgatatatagcatt 37935002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 96; Significance: 3e-47; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 20 - 123
Target Start/End: Complemental strand, 3137309 - 3137206
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3137309 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 3137210  T
Q  120 ctta 123  Q
    ||||    
T  3137209 ctta 3137206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 20 - 123
Target Start/End: Complemental strand, 34482783 - 34482680
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34482783 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 34482684  T
Q  120 ctta 123  Q
    ||||    
T  34482683 ctta 34482680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 20 - 123
Target Start/End: Complemental strand, 37216948 - 37216845
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  37216948 atgaaagattaataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 37216849  T
Q  120 ctta 123  Q
    ||||    
T  37216848 ctta 37216845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 20 - 122
Target Start/End: Complemental strand, 22426240 - 22426138
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  22426240 atgaaagattaataaatgagactgaaatctaaatgtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 22426141  T
Q  120 ctt 122  Q
    |||    
T  22426140 ctt 22426138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 20 - 122
Target Start/End: Original strand, 33113964 - 33114066
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  33113964 atgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 33114063  T
Q  120 ctt 122  Q
    |||    
T  33114064 ctt 33114066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 30385570 - 30385670
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  30385570 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatttagcattttc 30385669  T
Q  120 c 120  Q
    |    
T  30385670 c 30385670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 37522223 - 37522323
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  37522223 atgaaagattaataaatgagactgaaatctaaaggtgattattatgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 37522322  T
Q  120 c 120  Q
    |    
T  37522323 c 37522323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 6042047 - 6042150
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    |||||| |||||||||| | |||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  6042047 atgaaaaattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 6042146  T
Q  120 ctta 123  Q
    ||||    
T  6042147 ctta 6042150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 20 - 119
Target Start/End: Complemental strand, 8320477 - 8320378
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  8320477 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattattgatatctagcattttc 8320378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 3089589 - 3089689
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||||||||||||||    
T  3089589 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttagatctttcttataaaatcattcttgatatctagcattttc 3089688  T
Q  120 c 120  Q
    |    
T  3089689 c 3089689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 19650795 - 19650695
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  19650795 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 19650696  T
Q  120 c 120  Q
    |    
T  19650695 c 19650695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 3456234 - 3456337
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | |||||||||||||| |||||| |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  3456234 atgaaagattaataaatgagactgaaatctaaagatgattagtgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 3456333  T
Q  120 ctta 123  Q
    ||||    
T  3456334 ctta 3456337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 20 - 118
Target Start/End: Original strand, 33145882 - 33145980
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcatttt 118  Q
    ||||||| ||||||||||| |||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  33145882 atgaaaggttaataaataagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 33145980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 2754889 - 2754989
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||    
T  2754889 atgaaagattaataaatgagactgaaatttaaaggtgattattgtgccatgtcattcttaaatctttcttataaaatgattcttgatatctagcattttc 2754988  T
Q  120 c 120  Q
    |    
T  2754989 c 2754989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 3574421 - 3574321
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | ||||||||||| |||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  3574421 atgaaagattaataaatgagactgaaatctagaggtgattattgtgtcatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 3574322  T
Q  120 c 120  Q
    |    
T  3574321 c 3574321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 20 - 122
Target Start/End: Original strand, 48161076 - 48161178
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    |||||| |||||||||| | |||||||||||||||||||||||||| |||||| |||||| || ||||||||||||||||||||||||||||||||||||    
T  48161076 atgaaaaattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcgttcttggatatttcttataaaatcattcttgatatctagcattttc 48161175  T
Q  120 ctt 122  Q
    |||    
T  48161176 ctt 48161178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 40328011 - 40328106
Alignment:
Q  30 aataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttccttac 124  Q
    ||||||||| |||||||||||| ||||||||||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  40328011 aataaataagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctagcattttccttac 40328106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 47738281 - 47738382
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatttt 118  Q
    ||||||| ||||||||| | |||||||||||| | |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||    
T  47738281 atgaaaggttaataaatgagactgaaatctaaggatgattattgtgccatgtcattcttgaatctttcttgataaaatcattcttgatatctaacatttt 47738380  T
Q  119 cc 120  Q
    ||    
T  47738381 cc 47738382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 28 - 122
Target Start/End: Complemental strand, 36864920 - 36864825
Alignment:
Q  28 ttaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaat-ttttcttataaaatcattcttgatatctagcattttcctt 122  Q
    ||||||||| | |||||||||||| ||||||||||||| |||||||||||||||| |||| | |||||||||||||||||||||||||||||||||    
T  36864920 ttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatcttttttgataaaatcattcttgatatctagcattttcctt 36864825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 30 - 123
Target Start/End: Complemental strand, 8361924 - 8361831
Alignment:
Q  30 aataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcctta 123  Q
    ||||||| | |||||||||||| ||||||||||||| |||||||||||||||| ||||||   |||||||||||||||||||||||||||||||    
T  8361924 aataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttcctta 8361831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 26612916 - 26613017
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatttt 118  Q
    ||||||| ||||||||| | |||||||||||| ||||||||||||||||||| |||||||||| |||||| ||||||||||| |||||||||| ||||||    
T  26612916 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgttattcttgaatctttcttaataaaatcattattgatatctaacatttt 26613015  T
Q  119 cc 120  Q
    ||    
T  26613016 cc 26613017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 20 - 119
Target Start/End: Original strand, 46919064 - 46919164
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaat-ttttcttataaaatcattcttgatatctagcatttt 118  Q
    |||| |||||||||||||| || |||||||| ||||||||||| |||||||||||| |||||| |||| | |||||||||||||||||||||| ||||||    
T  46919064 atgatagattaataaataagaccgaaatctagaggtgattattctgccatgtcattattgaatcttttttgataaaatcattcttgatatctaacatttt 46919163  T
Q  119 c 119  Q
    |    
T  46919164 c 46919164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 42 - 121
Target Start/End: Original strand, 41224426 - 41224505
Alignment:
Q  42 tgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcct 121  Q
    |||||| ||| |||||||||||||||||||||||||||||| ||||||   |||||||||||||||||||||||||||||    
T  41224426 tgaaatttaagggtgattattgtgccatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttcct 41224505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 20 - 118
Target Start/End: Original strand, 42921295 - 42921394
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatttt 118  Q
    ||||||| ||||||||| | |||||||| ||| ||||||| |||||||||||||||||| ||| |||||| |||||||||||||| ||||||||||||||    
T  42921295 atgaaaggttaataaatgagactgaaatttaagggtgattgttgtgccatgtcattcttaaatatttcttgataaaatcattcttaatatctagcatttt 42921394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 30 - 120
Target Start/End: Complemental strand, 9796914 - 9796824
Alignment:
Q  30 aataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 120  Q
    ||||||| | ||||||||||||  |||||||||||| |||||||||||||||| ||||||   ||||||||||||||||||||||||||||    
T  9796914 aataaatgagactgaaatctaagagtgattattgtgacatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcc 9796824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 33839705 - 33839794
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 108  Q
    ||||||| ||||||||| | |||||||| ||| ||||||||||||| |||||||||||||||| |||||| |||||||||||||||||||    
T  33839705 atgaaaggttaataaatgagactgaaatttaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatat 33839794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 21 - 120
Target Start/End: Original strand, 24343720 - 24343820
Alignment:
Q  21 tgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaat-ttttcttataaaatcattcttgatatctagcattttc 119  Q
    |||||| ||||||||||| |||||||||||| |||||||||  |  |||||||||||||||| |||| | |||||||||||||||||||||| |||||||    
T  24343720 tgaaaggttaataaataagactgaaatctaagggtgattatcatatcatgtcattcttgaatcttttttgataaaatcattcttgatatctaacattttc 24343819  T
Q  120 c 120  Q
    |    
T  24343820 c 24343820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 2754794 - 2754721
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    ||||||||||||||||||| ||||||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  2754794 aaatctaaaggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 2754721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 3137402 - 3137475
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  3137402 aaatctaagggtgattattttgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 3137475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 3574515 - 3574588
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  3574515 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 3574588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 6041961 - 6041888
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  6041961 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 6041888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 44 - 108
Target Start/End: Original strand, 9797017 - 9797082
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 108  Q
    |||||||| |||||||||| |||||||||||||||||||||||||| | |||||| ||||||||||    
T  9797017 aaatctaatggtgattattctgccatgtcattcttgaatttttcttgagaaaatctttcttgatat 9797082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 33145789 - 33145717
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| ||||||||||||||| || |||| | |||||||| |||||||||| |||||||    
T  33145789 aaatctaagggtgattattctgccatgtcattcttaaaattttttaataaaatctttcttgatatatagcatt 33145717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 31 - 105
Target Start/End: Complemental strand, 41883106 - 41883031
Alignment:
Q  31 ataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttga 105  Q
    |||||||| ||||||||| |||| |||||||| | ||||||||||||||||| |||||| ||||||||||| ||||    
T  41883106 ataaataagactgaaatccaaagatgattattttaccatgtcattcttgaatctttcttcataaaatcatttttga 41883031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 89
Target Start/End: Original strand, 8362033 - 8362078
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt 89  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||    
T  8362033 aaatctaagggtgattattctgccatgtcattcttgaatttttctt 8362078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 11347345 - 11347272
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| ||| |||||| ||||||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  11347345 aaatctaagggttattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 11347272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 37217041 - 37217114
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||| ||| |||||||||| ||||||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  37217041 aaatttaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 37217114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 42298032 - 42298122
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||| ||||||||| | |||||||||||| |||| |||||||| |||||||||||||          ||||||||||||||||||| ||||||||||    
T  42298032 atgaaaggttaataaatgagactgaaatctaagggtggttattgtgtcatgtcattcttg----------ataaaatcattcttgatatttagcattttc 42298121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 108
Target Start/End: Complemental strand, 47738182 - 47738117
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 108  Q
    |||||||||||| |||||| |||||| |||||||||||| |||||| |||||||| ||||||||||    
T  47738182 aaatctaaaggtaattattctgccatatcattcttgaatatttcttgataaaatctttcttgatat 47738117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 108
Target Start/End: Original strand, 19650888 - 19650953
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 108  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| |||||||| ||||| ||||    
T  19650888 aaatctaatggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttaatat 19650953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 30385088 - 30385015
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||| ||| |||||||||| |||||||||||| ||||| ||||||| |||||||| |||||||||  |||||||    
T  30385088 aaatataagggtgattattctgccatgtcatttttgaaattttcttgataaaatctttcttgataaatagcatt 30385015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 34482898 - 34482971
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| | |||| ||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  34482898 aaatctaagggtgattattctaccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 34482971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 89
Target Start/End: Original strand, 41883211 - 41883256
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt 89  Q
    |||| ||| |||||||||| ||||||||||||||||||||||||||    
T  41883211 aaatttaagggtgattattctgccatgtcattcttgaatttttctt 41883256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 44 - 108
Target Start/End: Original strand, 22426332 - 22426397
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 108  Q
    |||||||| |||||||||| |||||||||||| || || ||||||| |||||||| ||||| ||||    
T  22426332 aaatctaagggtgattattctgccatgtcatttttaaaattttcttgataaaatctttcttaatat 22426397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 44 - 108
Target Start/End: Complemental strand, 26612862 - 26612797
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaat-ttttcttataaaatcattcttgatat 108  Q
    |||||||||  || ||||| ||||||||||||||||||| |||| |||||||||| || |||||||    
T  26612862 aaatctaaaaatggttattctgccatgtcattcttgaatttttttttataaaatcttttttgatat 26612797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 160 - 193
Target Start/End: Complemental strand, 41392782 - 41392749
Alignment:
Q  160 caatcaacaataaacactatgttgaaaatataaa 193  Q
    |||||||||||||| |||||||||||||||||||    
T  41392782 caatcaacaataaatactatgttgaaaatataaa 41392749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 95; Significance: 1e-46; HSPs: 5)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 20 - 122
Target Start/End: Original strand, 26106 - 26208
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26106 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 26205  T
Q  120 ctt 122  Q
    |||    
T  26206 ctt 26208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 20 - 122
Target Start/End: Original strand, 16154 - 16256
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16154 atgaaagattaataaatgagactgaaatctaaagatgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 16253  T
Q  120 ctt 122  Q
    |||    
T  16254 ctt 16256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 44 - 108
Target Start/End: Complemental strand, 8479 - 8414
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 108  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||    
T  8479 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 8414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 44 - 108
Target Start/End: Complemental strand, 16061 - 15996
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 108  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||    
T  16061 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 15996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 44 - 108
Target Start/End: Complemental strand, 26013 - 25948
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 108  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||    
T  26013 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 25948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 95; Significance: 1e-46; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 20 - 122
Target Start/End: Original strand, 51737675 - 51737777
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51737675 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 51737774  T
Q  120 ctt 122  Q
    |||    
T  51737775 ctt 51737777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 20 - 122
Target Start/End: Complemental strand, 36966603 - 36966501
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  36966603 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgttattcttgaatttttcttataaaatcattcttgatatctagcattttc 36966504  T
Q  120 ctt 122  Q
    |||    
T  36966503 ctt 36966501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 20 - 122
Target Start/End: Complemental strand, 41876337 - 41876235
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41876337 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 41876238  T
Q  120 ctt 122  Q
    |||    
T  41876237 ctt 41876235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 20 - 121
Target Start/End: Original strand, 19015574 - 19015675
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  19015574 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatgtagcattttc 19015673  T
Q  120 ct 121  Q
    ||    
T  19015674 ct 19015675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 9910186 - 9910086
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  9910186 atgaaagattaataaataagtctgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctaacattttc 9910087  T
Q  120 c 120  Q
    |    
T  9910086 c 9910086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 37821729 - 37821629
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37821729 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 37821630  T
Q  120 c 120  Q
    |    
T  37821629 c 37821629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 20 - 122
Target Start/End: Complemental strand, 20305025 - 20304923
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    |||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  20305025 atgaaagattgataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 20304926  T
Q  120 ctt 122  Q
    |||    
T  20304925 ctt 20304923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 6883657 - 6883757
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6883657 atgaaagattaataaatgagactgaaatctaaaggtgaatattatgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 6883756  T
Q  120 c 120  Q
    |    
T  6883757 c 6883757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 20 - 124
Target Start/End: Original strand, 18404618 - 18404722
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  18404618 atgaaagattaataaatgagactgaaatctaaatgtgattattgtgccatgtcattcttaaatctttcttataaaatcattcttgatatctagcattttc 18404717  T
Q  120 cttac 124  Q
    |||||    
T  18404718 cttac 18404722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 25973577 - 25973677
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25973577 atgaaagattaataaatgagactgaaatttaaaggtgattattgtgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 25973676  T
Q  120 c 120  Q
    |    
T  25973677 c 25973677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 20 - 119
Target Start/End: Original strand, 40215158 - 40215257
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    |||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  40215158 atgaaatattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 40215257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 25463846 - 25463946
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  25463846 atgaaagattaataaatgagacttaaatctaaaggtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 25463945  T
Q  120 c 120  Q
    |    
T  25463946 c 25463946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 44094867 - 44094970
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||| || ||||||||||||| ||||||||||||||||||||||    
T  44094867 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttggatctttcttataaaataattcttgatatctagcattttc 44094966  T
Q  120 ctta 123  Q
    ||||    
T  44094967 ctta 44094970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 3559787 - 3559887
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | |||||||| ||||||||||||||||| ||| ||||||||| || ||||||||||||||||||||||||||||||||||||    
T  3559787 atgaaagattaataaatgagactgaaatataaaggtgattattgtgtcatatcattcttggatctttcttataaaatcattcttgatatctagcattttc 3559886  T
Q  120 c 120  Q
    |    
T  3559887 c 3559887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 19722970 - 19722894
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 120  Q
    |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  19722970 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 19722894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 30 - 122
Target Start/End: Complemental strand, 33786516 - 33786424
Alignment:
Q  30 aataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcctt 122  Q
    ||||||| | |||||||||||| |||||||||||||||||||||||||||||| ||||||   ||||||||||||||||||||||||||||||    
T  33786516 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcctt 33786424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 30 - 120
Target Start/End: Complemental strand, 32000151 - 32000061
Alignment:
Q  30 aataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 120  Q
    ||||||| | |||||||||||| |||||||||||||||||||||||||||||| ||||||   ||||||||||||||||||||||||||||    
T  32000151 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcc 32000061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 40273888 - 40273976
Alignment:
Q  30 aataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcatttt 118  Q
    ||||||| | |||||||||||| |||||||||||||||||||||||||||||| ||||||   ||||||||||||||||||||||||||    
T  40273888 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatatttcttgataaatcattcttgatatctagcatttt 40273976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 23 - 118
Target Start/End: Complemental strand, 44690914 - 44690818
Alignment:
Q  23 aaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatttt 118  Q
    |||||||||||||||| |||| ||||||| |||||||||| ||||||||||||||||||| |||||| ||||||||||| |||||||||| ||||||    
T  44690914 aaagattaataaataagactggaatctaagggtgattattctgccatgtcattcttgaatctttcttgataaaatcattattgatatctaacatttt 44690818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 20 - 122
Target Start/End: Original strand, 10167569 - 10167672
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaat-ttttcttataaaatcattcttgatatctagcatttt 118  Q
    |||||| |||||||||||| |||||||||||||||||||||||||  ||| | |||||| ||| |||| |||||||||||||||| |||| || ||||||    
T  10167569 atgaaaaattaataaataagactgaaatctaaaggtgattattgtatcatattattcttaaatatttttttataaaatcattcttaatatgtaacatttt 10167668  T
Q  119 cctt 122  Q
    ||||    
T  10167669 cctt 10167672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 44 - 117
Target Start/End: Original strand, 33786623 - 33786696
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattt 117  Q
    |||| ||| |||||||||||||||||||||||||||||| ||||||   |||||||||||||||||||||||||    
T  33786623 aaatttaagggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattt 33786696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 16045786 - 16045859
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  16045786 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 16045859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 40215065 - 40214992
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  40215065 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 40214992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 40273779 - 40273706
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| || ||||||||||||||||||||||| | |||||| ||||||||||||||||||    
T  40273779 aaatctaagggtgattattttgacatgtcattcttgaatttttcttgaaaaaatctttcttgatatctagcatt 40273706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 18404519 - 18404446
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    ||||||||||||||||||| | ||||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  18404519 aaatctaaaggtgattattctaccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 18404446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 25463753 - 25463680
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  25463753 aaatctaagggtgattattctgccatgtcattcttaaaattttcttcataaaatctttcttgatatatagcatt 25463680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 44094775 - 44094702
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||  |||||||||| |||||||    
T  44094775 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcatt 44094702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 123
Target Start/End: Complemental strand, 27523143 - 27523047
Alignment:
Q  28 ttaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcctta 123  Q
    ||||||||||| ||| ||||| || |||||||| | ||||||   |||||||||| |||||| ||||||||||||||||||| || |||||||||||    
T  27523143 ttaataaataagactaaaatcaaagggtgattaatctgccatacgattcttgaatctttcttgataaaatcattcttgatatataacattttcctta 27523047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 119
Target Start/End: Complemental strand, 52064445 - 52064373
Alignment:
Q  48 ctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttc 119  Q
    |||| ||||| |||| || |||||||||||||||| |||||| ||||||||||| ||||||||||||||||||    
T  52064445 ctaagggtgaatattctgtcatgtcattcttgaatctttcttgataaaatcatttttgatatctagcattttc 52064373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 6883564 - 6883491
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| | |||||| ||||| |||| |||||||    
T  6883564 aaatctaagggtgattattctgccatgtcattcttgaaattttcttaaaaaaatctttcttaatatatagcatt 6883491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 9910281 - 9910354
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| | |||||||| |||||||||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  9910281 aaatctaaggttgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 9910354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 19015481 - 19015408
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| |||||| ||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  19015481 aaatctaagggtgattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 19015408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 32000255 - 32000328
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||| ||||| || ||||||||||||||||||||||| | |||||| |||||||||| |||||||    
T  32000255 aaatctaagggtggttattctgtcatgtcattcttgaatttttcttgagaaaatctttcttgatatatagcatt 32000328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 36966696 - 36966769
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| |||||| ||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  36966696 aaatctaagggtgattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 36966769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 37821822 - 37821895
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| |||||| ||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  37821822 aaatctaagggtgattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 37821895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 82
Target Start/End: Original strand, 52329453 - 52329507
Alignment:
Q  28 ttaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaat 82  Q
    ||||||| ||| |||||||||||| |||||||||| ||| |||||||||||||||    
T  52329453 ttaataattaagactgaaatctaagggtgattattctgctatgtcattcttgaat 52329507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 3559694 - 3559621
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattctt-gaatttttcttataaaatcattcttgatatctagcatt 116  Q
    |||| ||| |||||||||| |||||||||||||||  ||||||| | |||||||| |||||||||| |||||||    
T  3559694 aaatttaagggtgattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatatatagcatt 3559621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 196
Target Start/End: Complemental strand, 2606821 - 2606785
Alignment:
Q  160 caatcaacaataaacactatgttgaaaatataaagca 196  Q
    |||||||||||||| ||||||||||||||||||||||    
T  2606821 caatcaacaataaatactatgttgaaaatataaagca 2606785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 160 - 193
Target Start/End: Complemental strand, 9411282 - 9411249
Alignment:
Q  160 caatcaacaataaacactatgttgaaaatataaa 193  Q
    |||||||||||||||||||| |||||||||||||    
T  9411282 caatcaacaataaacactatattgaaaatataaa 9411249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 48 - 116
Target Start/End: Original strand, 41876434 - 41876503
Alignment:
Q  48 ctaaaggtgattattgtgccatgtcattctt-gaatttttcttataaaatcattcttgatatctagcatt 116  Q
    |||| |||||||||| |||||||||||||||  ||||||| | | |||||| |||||||||| |||||||    
T  41876434 ctaagggtgattattctgccatgtcattcttaaaatttttttgaaaaaatctttcttgatatatagcatt 41876503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 120
Target Start/End: Complemental strand, 22157425 - 22157333
Alignment:
Q  28 ttaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 120  Q
    ||||||||||| | |||||| |||  ||||||||| | ||||||||||||| |||   || ||  || ||||| |||||||||||||||||||    
T  22157425 ttaataaataagattgaaatttaagtgtgattattctcccatgtcattcttaaatccatcataagaattcatttttgatatctagcattttcc 22157333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 94; Significance: 5e-46; HSPs: 59)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 20 - 121
Target Start/End: Complemental strand, 26042008 - 26041907
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26042008 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 26041909  T
Q  120 ct 121  Q
    ||    
T  26041908 ct 26041907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 20 - 121
Target Start/End: Complemental strand, 40780024 - 40779923
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40780024 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 40779925  T
Q  120 ct 121  Q
    ||    
T  40779924 ct 40779923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 17841745 - 17841645
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17841745 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 17841646  T
Q  120 c 120  Q
    |    
T  17841645 c 17841645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 6108128 - 6108028
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6108128 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 6108029  T
Q  120 c 120  Q
    |    
T  6108028 c 6108028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 26 - 121
Target Start/End: Complemental strand, 1503732 - 1503637
Alignment:
Q  26 gattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcct 121  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1503732 gattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcct 1503637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 20 - 119
Target Start/End: Original strand, 14129029 - 14129128
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  14129029 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatatttcttataaaatcattcttgatatctagcattttc 14129128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 20 - 121
Target Start/End: Original strand, 32064916 - 32065017
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  32064916 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 32065015  T
Q  120 ct 121  Q
    ||    
T  32065016 ct 32065017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 20 - 121
Target Start/End: Complemental strand, 37985951 - 37985850
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  37985951 atgaaagattaataaatgggactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 37985852  T
Q  120 ct 121  Q
    ||    
T  37985851 ct 37985850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 3596936 - 3596836
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  3596936 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatatcattcttaaatttttcttataaaatcattcttgatatctagcattttc 3596837  T
Q  120 c 120  Q
    |    
T  3596836 c 3596836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 10044518 - 10044618
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  10044518 atgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 10044617  T
Q  120 c 120  Q
    |    
T  10044618 c 10044618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 25581134 - 25581034
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25581134 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 25581035  T
Q  120 c 120  Q
    |    
T  25581034 c 25581034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 42754937 - 42754837
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  42754937 atgaaagattaataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 42754838  T
Q  120 c 120  Q
    |    
T  42754837 c 42754837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 20 - 122
Target Start/End: Complemental strand, 1645859 - 1645757
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||    
T  1645859 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggttctttcttataaaatcattcttgatatctagcattttc 1645760  T
Q  120 ctt 122  Q
    |||    
T  1645759 ctt 1645757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 20 - 118
Target Start/End: Complemental strand, 24211267 - 24211169
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcatttt 118  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  24211267 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcatttt 24211169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 20 - 121
Target Start/End: Original strand, 15187730 - 15187831
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  15187730 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 15187829  T
Q  120 ct 121  Q
    ||    
T  15187830 ct 15187831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 20 - 118
Target Start/End: Complemental strand, 20091696 - 20091598
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcatttt 118  Q
    ||||||| ||||||||| | |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  20091696 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 20091598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 20 - 118
Target Start/End: Original strand, 34665551 - 34665649
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcatttt 118  Q
    ||||||| ||||||||| | |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  34665551 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 34665649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 21 - 118
Target Start/End: Original strand, 38017103 - 38017201
Alignment:
Q  21 tgaaagattaataaataatactgaaatctaaaggtga-ttattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcatttt 118  Q
    |||||||||||||||| | |||||||||||||||| | |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  38017103 tgaaagattaataaatgagactgaaatctaaaggtaaattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 38017201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 30055686 - 30055786
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||| ||||||||| | ||| |||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  30055686 atgaaaggttaataaatgagactaaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 30055785  T
Q  120 c 120  Q
    |    
T  30055786 c 30055786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 35353211 - 35353299
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatat 108  Q
    ||||||||||||||||| | | | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35353211 atgaaagattaataaatgagattaaaatttaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatat 35353299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 40 - 122
Target Start/End: Complemental strand, 31347651 - 31347569
Alignment:
Q  40 actgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcctt 122  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||   ||||||||||||||||||||||||||||||    
T  31347651 actgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcctt 31347569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 21 - 118
Target Start/End: Complemental strand, 37132575 - 37132477
Alignment:
Q  21 tgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatttt 118  Q
    |||||| ||||||||||| |||||||||||| ||||||||||||| |||||||||| ||||| |||||| |||||||||||||||||||||||||||||    
T  37132575 tgaaaggttaataaataagactgaaatctaagggtgattattgtgtcatgtcattcatgaatctttcttgataaaatcattcttgatatctagcatttt 37132477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 39772697 - 39772608
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatc 109  Q
    ||||||||||||||||  | |||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||    
T  39772697 atgaaagattaataaacgaaactgaaatctaaaggtgattattgtgtcatgtcattcttggatctttcttataaaatcattcttgatatc 39772608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 8454003 - 8454078
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaa 95  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  8454003 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaattcttcttataaaa 8454078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 32394027 - 32394114
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatat 108  Q
    ||||||||||||||||| | |||||||||||||||||||||||||| |||||||||||| ||| ||| |||||||||||||||||||||    
T  32394027 atgaaagattaataaatgagactgaaatctaaaggtgattattgtg-catgtcattcttaaatattttttataaaatcattcttgatat 32394114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 3890502 - 3890412
Alignment:
Q  28 ttaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattt 117  Q
    ||||||||||| | | |||||||| |||||||||| |||||| |||||||||||| |||||| ||||||||||||||||||||||||||||    
T  3890502 ttaataaataagattaaaatctaatggtgattattctgccatatcattcttgaatctttcttgataaaatcattcttgatatctagcattt 3890412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 33 - 121
Target Start/End: Complemental strand, 30834938 - 30834849
Alignment:
Q  33 aaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcct 121  Q
    |||||| |||||||||||| |||| ||||| || |||||||||||| ||| |||||| |||||||||||||||||||||| |||||||||    
T  30834938 aaataacactgaaatctaagggtggttattctgtcatgtcattctttaatctttcttgataaaatcattcttgatatctatcattttcct 30834849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 30 - 122
Target Start/End: Original strand, 7022159 - 7022251
Alignment:
Q  30 aataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcctt 122  Q
    ||||||| | |||||||||||| || |||||||||| | |||||||||||||| ||||||   |||||||| |||||||||||||||||||||    
T  7022159 aataaatgagactgaaatctaagggcgattattgtgacttgtcattcttgaatctttcttgataaatcattgttgatatctagcattttcctt 7022251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 32064822 - 32064749
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  32064822 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 32064749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 34665459 - 34665386
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  34665459 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 34665386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 7017743 - 7017649
Alignment:
Q  30 aataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttccttac 124  Q
    ||||||| | |||||||||||| | |||||||| |   ||||||||||| ||| ||||||   ||||||||||||||||||||||||||||||||    
T  7017743 aataaatgagactgaaatctaaggatgattattataaaatgtcattcttaaatatttcttgataaatcattcttgatatctagcattttccttac 7017649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 17841838 - 17841911
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  17841838 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 17841911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 20091789 - 20091862
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||  |||||||||| |||||||    
T  20091789 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcatt 20091862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 24844756 - 24844655
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatttt 118  Q
    ||||||| ||||||| ||| | | ||||||||  ||||||||| ||||||| ||||||| ||| |||||| ||||||||||| |||||||||| ||||||    
T  24844756 atgaaaggttaataattaagattaaaatctaagagtgattattttgccatgccattcttaaatctttcttgataaaatcattattgatatctaacatttt 24844657  T
Q  119 cc 120  Q
    ||    
T  24844656 cc 24844655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 31347770 - 31347843
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| |||||||||||||||||||||||||| | |||||  |||||||||| |||||||    
T  31347770 aaatctaagggtgattattctgccatgtcattcttgaatttttcttgagaaaatatttcttgatatatagcatt 31347843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 40780117 - 40780190
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  40780117 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 40780190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 41819655 - 41819594
Alignment:
Q  28 ttaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt 89  Q
    ||||||||| | |||||||||||| ||||||||||||| |||||||||||||||| ||||||    
T  41819655 ttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttctt 41819594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 44 - 108
Target Start/End: Original strand, 42755030 - 42755095
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 108  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||    
T  42755030 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 42755095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 115
Target Start/End: Original strand, 25581227 - 25581299
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcat 115  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||  ||||| | |||||||||| ||||||    
T  25581227 aaatctaaaggtgattattttgccatgtcattcttgaaattttcttcgtaaaaactttcttgatatatagcat 25581299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 44 - 117
Target Start/End: Original strand, 24844847 - 24844920
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattt 117  Q
    |||||||| |||||||||| || ||||||||||||||||||||||| |||||||  |||||||||| ||||||||    
T  24844847 aaatctaagggtgattatt-tgtcatgtcattcttgaatttttcttaataaaatatttcttgatatgtagcattt 24844920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 7017853 - 7017926
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| | |||||||| |||||||||||||||||||||||||| | |||||| ||| |||||| |||||||    
T  7017853 aaatctaaggatgattattctgccatgtcattcttgaatttttcttaagaaaatctttcatgatatatagcatt 7017926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 108
Target Start/End: Complemental strand, 7022055 - 7021990
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 108  Q
    |||||||| |||||||||| |||||| ||||||||||||||||||| | |||||| ||||||||||    
T  7022055 aaatctaagggtgattattctgccatatcattcttgaatttttcttgagaaaatctttcttgatat 7021990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 8453911 - 8453838
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| || ||||||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  8453911 aaatctaagggtgattattttgtcatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 8453838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 14128941 - 14128868
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| ||||||||||||||| || |||| || |||||||| |||||||||| |||||||    
T  14128941 aaatctaagggtgattattctgccatgtcattcttaaaattttattgataaaatctttcttgatatatagcatt 14128868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 15187637 - 15187564
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| ||| |||||| |||||| ||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  15187637 aaatctaagggtaattattctgccatatcattcttgaaattttcttgataaaatctttcttgatatatagcatt 15187564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 26042104 - 26042177
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| || ||||||||||||||| ||||||| |||||||| ||||| |||| |||||||    
T  26042104 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttaatatatagcatt 26042177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 27782105 - 27782178
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| |||||||||||| |||||| |||||| |||||||  |||||||||| |||||||    
T  27782105 aaatctaagggtgattattctgccatgtcattattgaatctttcttgataaaatatttcttgatatatagcatt 27782178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 32393935 - 32393862
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||| ||| |||||||||| ||||||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  32393935 aaatttaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 32393862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 35353118 - 35353045
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| | |||||| |||||||||| |||||||    
T  35353118 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcatt 35353045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 37986043 - 37986116
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattctt-gaatttttcttataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| |||||||||||||||  ||||||| | |||||||| |||||||||| |||||||    
T  37986043 aaatctaagggtgattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatatatagcatt 37986116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 44 - 108
Target Start/End: Original strand, 30835035 - 30835099
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatat 108  Q
    ||||| || |||||||||| |||||||||||||||||||||||   |||||||| ||||||||||    
T  30835035 aaatcaaagggtgattattctgccatgtcattcttgaattttttcgataaaatctttcttgatat 30835099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 53 - 108
Target Start/End: Complemental strand, 38017039 - 38016983
Alignment:
Q  53 ggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 108  Q
    |||||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||    
T  38017039 ggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 38016983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 51 - 89
Target Start/End: Original strand, 3890611 - 3890649
Alignment:
Q  51 aaggtgattattgtgccatgtcattcttgaatttttctt 89  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  3890611 aaggtgattattctgccatgtcattcttgaatttttctt 3890649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 108
Target Start/End: Original strand, 6108221 - 6108286
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 108  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| | |||||| ||||||||||    
T  6108221 aaatctaagggtgattattctgccatgtcattcttaaaattttcttaaaaaaatctttcttgatat 6108286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 27835441 - 27835514
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| | |||||||| | |||||||||||||||||||||||| |||| ||| || ||||||| |||||||    
T  27835441 aaatctaaggatgattattttaccatgtcattcttgaatttttcttaataagatctttattgatatatagcatt 27835514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 108
Target Start/End: Original strand, 39772789 - 39772854
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttg-aatttttcttataaaatcattcttgatat 108  Q
    |||||||| |||||||||| |||||||||||||||| ||||||| | |||||||  ||||||||||    
T  39772789 aaatctaagggtgattattctgccatgtcattcttgaaatttttttgataaaatatttcttgatat 39772854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 1886621 - 1886672
Alignment:
Q  58 ttattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 108  Q
    ||||| ||||| ||||||||||||| |||||| |||||||||||||||||||    
T  1886621 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 1886672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 37132657 - 37132719
Alignment:
Q  55 tgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| ||||||||||||||| |||||||||| |||||||  || ||||||| |||||||    
T  37132657 tgattattctgccatgtcattcttaaatttttcttgataaaatattttttgatatatagcatt 37132719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 44 - 89
Target Start/End: Original strand, 3817918 - 3817963
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt 89  Q
    |||||||| |||||||||| || ||||| |||||||||||||||||    
T  3817918 aaatctaagggtgattattctgtcatgtaattcttgaatttttctt 3817963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 94; Significance: 5e-46; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 20 - 121
Target Start/End: Original strand, 4892372 - 4892473
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4892372 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 4892471  T
Q  120 ct 121  Q
    ||    
T  4892472 ct 4892473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 33584224 - 33584124
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33584224 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 33584125  T
Q  120 c 120  Q
    |    
T  33584124 c 33584124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 20 - 122
Target Start/End: Original strand, 25398408 - 25398510
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  25398408 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattgttgaatttttcttataaaatcattcttgatatctagcattttc 25398507  T
Q  120 ctt 122  Q
    |||    
T  25398508 ctt 25398510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 20 - 121
Target Start/End: Complemental strand, 3521902 - 3521801
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  3521902 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 3521803  T
Q  120 ct 121  Q
    ||    
T  3521802 ct 3521801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 6043407 - 6043307
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  6043407 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 6043308  T
Q  120 c 120  Q
    |    
T  6043307 c 6043307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 8145543 - 8145643
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  8145543 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 8145642  T
Q  120 c 120  Q
    |    
T  8145643 c 8145643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 20 - 117
Target Start/End: Original strand, 12850972 - 12851069
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattt 117  Q
    ||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12850972 atgaaagattaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattt 12851069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 20 - 121
Target Start/End: Complemental strand, 37321688 - 37321587
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  37321688 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatttcattcttgaatatttcttataaaatcattcttgatatctagcattttc 37321589  T
Q  120 ct 121  Q
    ||    
T  37321588 ct 37321587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 20 - 121
Target Start/End: Original strand, 14138837 - 14138938
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  14138837 atgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 14138936  T
Q  120 ct 121  Q
    ||    
T  14138937 ct 14138938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 2477806 - 2477906
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||  || ||||||||||||||||||||||||||||||||||||    
T  2477806 atgaaagattaataaataagactgaaatctaaaggtgatcattgtgccatgtcattcttagatctttcttataaaatcattcttgatatctagcattttc 2477905  T
Q  120 c 120  Q
    |    
T  2477906 c 2477906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 20 - 119
Target Start/End: Original strand, 3362949 - 3363048
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | ||||||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  3362949 atgaaagattaataaatgagactgaaatctaaaggtggttattgtgtcatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 3363048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 38899621 - 38899520
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaat-ttttcttataaaatcattcttgatatctagcatttt 118  Q
    ||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  38899621 atgaaagattaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttgaatttttttttataaaatcattcttgatatctagcatttt 38899522  T
Q  119 cc 120  Q
    ||    
T  38899521 cc 38899520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 20 - 121
Target Start/End: Complemental strand, 12614633 - 12614531
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaat-ttttcttataaaatcattcttgatatctagcatttt 118  Q
    ||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||| ||| |||| | |||||||||| ||||||||||||||||||    
T  12614633 atgaaaggttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatcttttttgataaaatcatacttgatatctagcatttt 12614534  T
Q  119 cct 121  Q
    |||    
T  12614533 cct 12614531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 30 - 120
Target Start/End: Complemental strand, 22912942 - 22912852
Alignment:
Q  30 aataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 120  Q
    ||||||| | |||||||||||| |||||||||||||||||||||||||||||| ||||||   ||||||||||||||||||||||||||||    
T  22912942 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcc 22912852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 11361026 - 11360947
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcat 99  Q
    ||||||||||||||||| | | |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  11361026 atgaaagattaataaattagattgaaatctaaagatgattattgtgccatgtcattcttgaatctttcttataaaatcat 11360947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 4433903 - 4433845
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattctt 78  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  4433903 atgaaagattaataaataagactgaaatctaaaggtgattattgtgccatgtcattctt 4433845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 30 - 121
Target Start/End: Complemental strand, 17545567 - 17545476
Alignment:
Q  30 aataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcct 121  Q
    ||||||| | |||||||||||| | ||||||||||| |||||||||||| ||| ||| ||   |||||||||||||||||||||||||||||    
T  17545567 aataaatgagactgaaatctaaggatgattattgtgtcatgtcattcttaaatattttttgataaatcattcttgatatctagcattttcct 17545476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 22913042 - 22913115
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| |||||||||||||||||||||||||| | |||||| |||||||||| |||||||    
T  22913042 aaatctaagggtgattattctgccatgtcattcttgaatttttcttgaaaaaatctttcttgatatatagcatt 22913115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 2477713 - 2477640
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  2477713 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 2477640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 6043499 - 6043572
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| | |||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  6043499 aaatctaagggtgattattcttccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 6043572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 44 - 108
Target Start/End: Complemental strand, 8145452 - 8145387
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 108  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||    
T  8145452 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 8145387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 11361119 - 11361192
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  11361119 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 11361192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 108
Target Start/End: Complemental strand, 10458469 - 10458409
Alignment:
Q  49 taaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 108  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||  ||||||||||    
T  10458469 taaaggtgattattttgccatgtcattcttgaatttttcttgataaaatttttcttgatat 10458409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 3362855 - 3362782
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||| ||||| |||||||||||||||| | ||||||| |||||||| |||||||||| |||||||    
T  3362855 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 3362782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 4433995 - 4434068
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| |||||| ||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  4433995 aaatctaagggtgattattctgccatatcattcttgaaattttcttaaaaaaatctttcttgatatatagcatt 4434068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 4892279 - 4892206
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| | |||||| |||||||||| |||||||    
T  4892279 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcatt 4892206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 12614721 - 12614794
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| || |||||||||||||||| |||||| |||||||  |||||||||| |||||||    
T  12614721 aaatctaagggtgattattatgtcatgtcattcttgaatctttcttgataaaatatttcttgatatatagcatt 12614794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 89
Target Start/End: Original strand, 17545673 - 17545718
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt 89  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||    
T  17545673 aaatctaatggtgattattctgccatgtcattcttgaatttttctt 17545718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 25398315 - 25398242
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| | |||||| |||||||||| |||||||    
T  25398315 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcatt 25398242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 38899714 - 38899787
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||| ||||| |||||||||||||||| | ||||||| |||||||| |||||||||| |||||||    
T  38899714 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 38899787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 82
Target Start/End: Original strand, 13664736 - 13664791
Alignment:
Q  27 attaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaat 82  Q
    |||||||||||| |||||||||||| |||||||||| |  ||||||||||||||||    
T  13664736 attaataaataagactgaaatctaagggtgattattctatcatgtcattcttgaat 13664791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 108
Target Start/End: Original strand, 3521994 - 3522059
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 108  Q
    |||||||| |||||||||| |||||||||||| ||||| ||||||| | |||||| ||||||||||    
T  3521994 aaatctaatggtgattattctgccatgtcatttttgaaattttcttgaaaaaatctttcttgatat 3522059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 12850878 - 12850805
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||| ||||| |||||||||||| ||| | ||||||| |||||||| |||||||||| |||||||    
T  12850878 aaatctaagggtggttattctgccatgtcatttttggaattttcttgataaaatctttcttgatatatagcatt 12850805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 33584317 - 33584390
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||| ||| |||||||||| ||||||||||||||| || ||||||| | |||||| |||||||||| |||||||    
T  33584317 aaatttaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcatt 33584390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 27482017 - 27482077
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaat-ttttcttataaaatcattctt 103  Q
    ||||||||||||||||||| ||  ||||||||||||||| |||| | ||||||||||||||    
T  27482017 aaatctaaaggtgattattctgttatgtcattcttgaatcttttttgataaaatcattctt 27482077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 37321781 - 37321855
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattctt-gatatctagcatt 116  Q
    |||| ||| |||||||||| ||||||||||||||| || ||||||| |||||||| ||||| ||||| |||||||    
T  37321781 aaatttaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttagatatatagcatt 37321855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 89
Target Start/End: Complemental strand, 31640836 - 31640767
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt 89  Q
    ||||||| ||||||||||| |    |||||||||  ||||||| ||||||||||||||||||| ||||||    
T  31640836 atgaaaggttaataaataagatatcaatctaaagtcgattattctgccatgtcattcttgaatctttctt 31640767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 44 - 89
Target Start/End: Original strand, 31640928 - 31640973
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt 89  Q
    |||||||| |||| ||||| ||||||||||||||||||| ||||||    
T  31640928 aaatctaagggtggttattctgccatgtcattcttgaatctttctt 31640973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 118
Target Start/End: Original strand, 12614483 - 12614511
Alignment:
Q  90 ataaaatcattcttgatatctagcatttt 118  Q
    |||||||||||||||||||||||||||||    
T  12614483 ataaaatcattcttgatatctagcatttt 12614511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 93; Significance: 2e-45; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 33380377 - 33380477
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33380377 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 33380476  T
Q  120 c 120  Q
    |    
T  33380477 c 33380477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 35160929 - 35161029
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35160929 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 35161028  T
Q  120 c 120  Q
    |    
T  35161029 c 35161029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 10662058 - 10662158
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10662058 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 10662157  T
Q  120 c 120  Q
    |    
T  10662158 c 10662158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 23267957 - 23267857
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  23267957 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 23267858  T
Q  120 c 120  Q
    |    
T  23267857 c 23267857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 20 - 122
Target Start/End: Original strand, 13355018 - 13355120
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | ||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  13355018 atgaaagattaataaatgagactgaaatctaaaagtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 13355117  T
Q  120 ctt 122  Q
    |||    
T  13355118 ctt 13355120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 7475403 - 7475303
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | ||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  7475403 atgaaagattaataaatgagactgaaatctaaaggtgattattatgtcatatcattcttgaatttttcttataaaatcattcttgatatctagcattttc 7475304  T
Q  120 c 120  Q
    |    
T  7475303 c 7475303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 9293470 - 9293370
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | |||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  9293470 atgaaagattaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 9293371  T
Q  120 c 120  Q
    |    
T  9293370 c 9293370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 3989246 - 3989342
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcatt 116  Q
    ||||||||||||||||| | |||||||||||||||| ||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||||    
T  3989246 atgaaagattaataaatgagactgaaatctaaaggttattattgtgtcatgtcattcttggatctttcttataaaatcattcttgatatctagcatt 3989342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 20 - 117
Target Start/End: Complemental strand, 31174730 - 31174633
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattt 117  Q
    ||||||||||||||||| | | ||||||||||||| | |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  31174730 atgaaagattaataaatgagattgaaatctaaaggagtttattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattt 31174633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 20 - 122
Target Start/End: Original strand, 22592880 - 22592985
Alignment:
Q  20 atgaaagattaataaataatactgaaa--tctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    ||||||| ||||||||||| |||||||  ||||| ||||||||||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  22592880 atgaaaggttaataaataagactgaaaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctagcatt 22592979  T
Q  117 ttcctt 122  Q
    ||||||    
T  22592980 ttcctt 22592985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 30 - 121
Target Start/End: Original strand, 43331092 - 43331183
Alignment:
Q  30 aataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcct 121  Q
    ||||||| | ||||||||||||||||||||||||| ||||||||||||||||| ||||||   |||||||||||||||||||||||||||||    
T  43331092 aataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcct 43331183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 30 - 120
Target Start/End: Original strand, 9723586 - 9723677
Alignment:
Q  30 aataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 120  Q
    ||||||||| ||||||||||||||||||||||| || |||||||||||| ||| |||||| || ||||||||||||||||||| ||||||||    
T  9723586 aataaataagactgaaatctaaaggtgattattctgtcatgtcattcttaaatatttcttgatcaaatcattcttgatatctaacattttcc 9723677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 21936252 - 21936311
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttg 79  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  21936252 atgaaagattaataaatgaaactgaaatctaaaggtgattattgtgccatgtcattcttg 21936311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 21393570 - 21393483
Alignment:
Q  30 aataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcatttt 118  Q
    ||||||| | |||||||| ||| ||||||||||||| ||||||||||||||| |||||||   ||||||||||||||||||||||||||    
T  21393570 aataaatgagactgaaatttaagggtgattattgtgtcatgtcattcttgaa-ttttcttgataaatcattcttgatatctagcatttt 21393483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 14941354 - 14941427
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| ||||||||||||||||||| |||||| |||||||| |||||||||| |||||||    
T  14941354 aaatctaagggtgattattctgccatgtcattcttgaatctttcttaataaaatctttcttgatatatagcatt 14941427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 30 - 123
Target Start/End: Complemental strand, 34321042 - 34320960
Alignment:
Q  30 aataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcctta 123  Q
    ||||||| | |||||||||||| ||||||||||||||||||||||||||||           ||||||||||||||||||||||||||||||||    
T  34321042 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttga-----------aaaatcattcttgatatctagcattttcctta 34320960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 9293564 - 9293637
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  9293564 aaatctaagggtgattattctgccatgtcattcttgaaaatttcttgataaaatctttcttgatatatagcatt 9293637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 10661964 - 10661891
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  10661964 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 10661891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 20 - 89
Target Start/End: Complemental strand, 16767357 - 16767288
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt 89  Q
    ||||||| ||||||||| | ||||||||||||  |||||||||||| |||||||||||||||| ||||||    
T  16767357 atgaaaggttaataaatgagactgaaatctaagagtgattattgtgtcatgtcattcttgaatctttctt 16767288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 21936158 - 21936085
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| |||||| ||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  21936158 aaatctaagggtgattattctgccatatcattcttgaaattttcttgataaaatctttcttgatatatagcatt 21936085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 23268050 - 23268123
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  23268050 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 23268123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 44 - 108
Target Start/End: Original strand, 31174822 - 31174887
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 108  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||    
T  31174822 aaatctaagggtgattattctgccatgtcattcttgaaattttcttaataaaatctttcttgatat 31174887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 35160834 - 35160761
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  35160834 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 35160761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 39819272 - 39819317
Alignment:
Q  75 tcttgaatttttcttataaaatcattcttgatatctagcattttcc 120  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||    
T  39819272 tcttgaatttttcttataaaatcattcttgatatctaacattttcc 39819317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 43330989 - 43330916
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| ||||||||||||||||||||||| || | |||||| |||||||||| |||||||    
T  43330989 aaatctaagggtgattattctgccatgtcattcttgaattttttttgagaaaatctttcttgatatatagcatt 43330916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 80
Target Start/End: Complemental strand, 14941259 - 14941199
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttga 80  Q
    ||||||| ||||||||||| | |||||||||| | ||||||||||| ||||||||||||||    
T  14941259 atgaaaggttaataaataagattgaaatctaaggatgattattgtgtcatgtcattcttga 14941199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 7475496 - 7475569
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| |  ||||||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  7475496 aaatctaagggtgattattctatcatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 7475569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 108
Target Start/End: Complemental strand, 13354923 - 13354858
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 108  Q
    |||||||| ||| |||||| |||||| ||||||||||| ||||||| |||||||| ||||||||||    
T  13354923 aaatctaagggtaattattctgccatatcattcttgaaattttcttgataaaatctttcttgatat 13354858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 21393676 - 21393749
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| | ||||||||||||| |||||||||| | |||||  |||||||||| |||||||    
T  21393676 aaatctaagggtgattattctaccatgtcattcttaaatttttcttgagaaaatttttcttgatatatagcatt 21393749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 108
Target Start/End: Complemental strand, 27847709 - 27847644
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 108  Q
    |||||||| |||||||||| || |||||||||||||||| |||||| |||||||| ||||| ||||    
T  27847709 aaatctaacggtgattattctgtcatgtcattcttgaatctttcttaataaaatctttctttatat 27847644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 33380284 - 33380211
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| ||||||||||  |||||||||||||| || ||||||| | |||||| |||||||||| |||||||    
T  33380284 aaatctaagggtgattattcagccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcatt 33380211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 90
Target Start/End: Complemental strand, 37335789 - 37335744
Alignment:
Q  45 aatctaaaggtgattattgtgccatgtcattcttgaatttttctta 90  Q
    |||||||| ||||||||| ||||||||||||||||||| |||||||    
T  37335789 aatctaaaagtgattattctgccatgtcattcttgaatctttctta 37335744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 99
Target Start/End: Original strand, 37335824 - 37335894
Alignment:
Q  30 aataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcat 99  Q
    ||||||| | |||||||||||| |||||||| |||| ||||||||| || ||| |||||| ||||||||||    
T  37335824 aataaatgagactgaaatctaagggtgattactgtgtcatgtcattattaaatctttcttgataaaatcat 37335894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 44 - 89
Target Start/End: Complemental strand, 3989153 - 3989108
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt 89  Q
    |||||||| |||||||||| ||||||||||||||| || |||||||    
T  3989153 aaatctaagggtgattattctgccatgtcattcttaaaattttctt 3989108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 9723482 - 9723409
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||| ||| |||||||||| || |||||||||||| ||| |||||| |||||||| ||||| |||| |||||||    
T  9723482 aaatttaagggtgattattctgtcatgtcattcttaaatctttcttaataaaatctttcttaatatatagcatt 9723409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 56 - 108
Target Start/End: Complemental strand, 22591547 - 22591494
Alignment:
Q  56 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 108  Q
    ||||||| |||||| |||||||||||||||| || |||||||| ||||||||||    
T  22591547 gattattctgccatatcattcttgaattttttttaataaaatctttcttgatat 22591494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 90 - 123
Target Start/End: Original strand, 27847801 - 27847834
Alignment:
Q  90 ataaaatcattcttgatatctagcattttcctta 123  Q
    ||||||| ||||||||||||||||||||||||||    
T  27847801 ataaaattattcttgatatctagcattttcctta 27847834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 90; Significance: 1e-43; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 20 - 121
Target Start/End: Complemental strand, 48880822 - 48880721
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48880822 atgaaagattaataaatgaaactgaaatctaaatgtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 48880723  T
Q  120 ct 121  Q
    ||    
T  48880722 ct 48880721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 20 - 122
Target Start/End: Original strand, 3962148 - 3962250
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  3962148 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatatttcttataaaatcattcttgatatctagcattttc 3962247  T
Q  120 ctt 122  Q
    |||    
T  3962248 ctt 3962250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 20 - 121
Target Start/End: Original strand, 35445567 - 35445668
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  35445567 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatatcattcttgaatttttcttataaaatcattcttgatatctagcattttc 35445666  T
Q  120 ct 121  Q
    ||    
T  35445667 ct 35445668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 20 - 121
Target Start/End: Original strand, 42611981 - 42612082
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||||||||||||||    
T  42611981 atgaaagattaataaataagactgaaatctaaaggtgattattgtgccatgtcattcttagatctttcttataaaatcattcttgatatctagcattttc 42612080  T
Q  120 ct 121  Q
    ||    
T  42612081 ct 42612082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 20 - 121
Target Start/End: Original strand, 45637881 - 45637982
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  45637881 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 45637980  T
Q  120 ct 121  Q
    ||    
T  45637981 ct 45637982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 24395141 - 24395241
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  24395141 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaatcattcttgatatctagcattttc 24395240  T
Q  120 c 120  Q
    |    
T  24395241 c 24395241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 30848739 - 30848839
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  30848739 atgaaagattaataaatgagactgaaatttaaaggtgattattgtgccatgtcattcttgaatttttcttataaaagcattcttgatatctagcattttc 30848838  T
Q  120 c 120  Q
    |    
T  30848839 c 30848839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 20 - 122
Target Start/End: Original strand, 15329444 - 15329546
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  15329444 atgaaagattaataaatgagactgaaatctaaaagtgattattgtgccatgtcattcttgaatatttcttataaaatcattctttatatctagcattttc 15329543  T
Q  120 ctt 122  Q
    |||    
T  15329544 ctt 15329546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 25167731 - 25167651
Alignment:
Q  40 actgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 120  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25167731 actgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 25167651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 34483008 - 34483108
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  34483008 atgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 34483107  T
Q  120 c 120  Q
    |    
T  34483108 c 34483108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 23 - 122
Target Start/End: Complemental strand, 15577739 - 15577640
Alignment:
Q  23 aaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcctt 122  Q
    |||||||||||||| | |||||||||||||||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  15577739 aaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttggatctttcttataaaatcattcttgatatctagcattttcctt 15577640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 35876414 - 35876514
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||  || ||||||||||||||||||||||||||||||||||||    
T  35876414 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcatttttagatatttcttataaaatcattcttgatatctagcattttc 35876513  T
Q  120 c 120  Q
    |    
T  35876514 c 35876514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 20 - 118
Target Start/End: Complemental strand, 4974630 - 4974532
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcatttt 118  Q
    ||||||| ||||||||| | |||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  4974630 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatcttttttataaaatcattcttgatatctagcatttt 4974532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 28 - 121
Target Start/End: Original strand, 42696261 - 42696355
Alignment:
Q  28 ttaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcct 121  Q
    ||||||||| | |||||||||||| |||||||||||| ||||||||||||||||||||| || ||||||||||| |||||||||| |||||||||    
T  42696261 ttaataaatgagactgaaatctaagggtgattattgtaccatgtcattcttgaattttttttgataaaatcattattgatatctaacattttcct 42696355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 37476965 - 37476876
Alignment:
Q  30 aataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||| | |||||||||||| ||||||||||||||||||||||| || ||| ||||||   |||||||||||||||||||||||||||    
T  37476965 aataaatgagactgaaatctaagggtgattattgtgccatgtcattattaaatctttcttgataaatcattcttgatatctagcattttc 37476876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 20 - 111
Target Start/End: Original strand, 29737314 - 29737406
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatcta 111  Q
    ||||||| ||||||||| | |||||||||||| ||||||||||||| ||||| |||||| ||| |||||| ||||||||||||||||||||||    
T  29737314 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgacatgttattcttaaatctttcttgataaaatcattcttgatatcta 29737406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 40 - 122
Target Start/End: Original strand, 18037167 - 18037249
Alignment:
Q  40 actgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcctt 122  Q
    |||||||||||| |||||||||||| ||||||||||||| ||| ||||||   |||||||| |||||||||||||||||||||    
T  18037167 actgaaatctaagggtgattattgtaccatgtcattcttaaatctttcttgataaatcattgttgatatctagcattttcctt 18037249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 30 - 121
Target Start/End: Original strand, 15238564 - 15238655
Alignment:
Q  30 aataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcct 121  Q
    ||||||| | |||||||||||| | ||||||||||| |||||||||||| ||| ||| ||   |||||||||||||||||||||||||||||    
T  15238564 aataaatgagactgaaatctaaggatgattattgtgtcatgtcattcttaaatattttttgataaatcattcttgatatctagcattttcct 15238655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 4974723 - 4974796
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  4974723 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 4974796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 42611888 - 42611815
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  42611888 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 42611815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 45637789 - 45637716
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  45637789 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 45637716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 47 - 116
Target Start/End: Original strand, 15577841 - 15577911
Alignment:
Q  47 tctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    ||||| |||||||||| |||||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  15577841 tctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 15577911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 15329350 - 15329277
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  15329350 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 15329277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 34482912 - 34482839
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  34482912 aaatctaagggtgattattctgccatgtcattcttaaaattttcttaataaaatctttcttgatatatagcatt 34482839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 48880915 - 48880988
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  48880915 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 48880988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 118
Target Start/End: Complemental strand, 20009991 - 20009895
Alignment:
Q  23 aaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaat-ttttcttataaaatcattcttgatatctagcatttt 118  Q
    |||| ||||||||| | ||| ||||||||   ||||||||||| |||||||||||||||| |||| | |||||||||||| ||||||||| ||||||    
T  20009991 aaaggttaataaatgagactaaaatctaagtatgattattgtgtcatgtcattcttgaatcttttttgataaaatcattcatgatatctatcatttt 20009895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 89
Target Start/End: Complemental strand, 15238459 - 15238414
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt 89  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||    
T  15238459 aaatctaatggtgattattctgccatgtcattcttgaatttttctt 15238414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 24395049 - 24394976
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    ||||||||||||  ||||| ||||||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  24395049 aaatctaaaggttgttattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 24394976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 35444635 - 35444562
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| | |||||| ||||| |||| |||||||    
T  35444635 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttaatatatagcatt 35444562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 37477079 - 37477141
Alignment:
Q  55 tgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| ||||||||||||||| |||||||||| | |||||| |||||||||| |||||||    
T  37477079 tgattattctgccatgtcattcttaaatttttcttgagaaaatctttcttgatatatagcatt 37477141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 120
Target Start/End: Complemental strand, 40880706 - 40880641
Alignment:
Q  54 gtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 120  Q
    |||||||||||||||||| ||| || ||| ||||  || ||||||||||||||||||||||||||||    
T  40880706 gtgattattgtgccatgttattttttaatctttca-atcaaatcattcttgatatctagcattttcc 40880641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 3962056 - 3961983
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||| ||| |||||||||| || |||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  3962056 aaatttaagggtgattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 3961983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 108
Target Start/End: Complemental strand, 18037055 - 18036990
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 108  Q
    |||| ||| |||||||||| ||||||||||||||| |||||||||| | |||||| ||||||||||    
T  18037055 aaatttaagggtgattattctgccatgtcattcttaaatttttcttgaaaaaatctttcttgatat 18036990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 25167838 - 25167911
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| | |||||||| ||||||||||||||| || ||||||| | |||||| |||||||||| |||||||    
T  25167838 aaatctaaggatgattattctgccatgtcattcttaaaattttcttaaaaaaatctttcttgatatatagcatt 25167911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 29737216 - 29737143
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| | ||||||||||||| || ||||||| | |||||| |||||||||| |||||||    
T  29737216 aaatctaagggtgattattctaccatgtcattcttaaaattttcttaaaaaaatctttcttgatatatagcatt 29737143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 120
Target Start/End: Complemental strand, 36790336 - 36790271
Alignment:
Q  56 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 120  Q
    |||||||||| |||||||||||||||| ||| || |||||| |||| ||||||| |||||||||||    
T  36790336 gattattgtgtcatgtcattcttgaatctttgttgataaaaccattattgatatttagcattttcc 36790271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 36790454 - 36790527
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||| ||| ||| |||||| ||||||||||||||| |||||||||| |||||| | |||||||||| |||||||    
T  36790454 aaatttaagggtaattattctgccatgtcattcttaaatttttcttgataaaaactttcttgatatatagcatt 36790527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 160 - 193
Target Start/End: Original strand, 33342272 - 33342305
Alignment:
Q  160 caatcaacaataaacactatgttgaaaatataaa 193  Q
    |||||||||||||| |||||||||||||||||||    
T  33342272 caatcaacaataaatactatgttgaaaatataaa 33342305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 88; Significance: 2e-42; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 33696867 - 33696970
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  33696867 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatctttcttataaaatcattcttgatatctagcattttc 33696966  T
Q  120 ctta 123  Q
    ||||    
T  33696967 ctta 33696970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 20 - 122
Target Start/End: Original strand, 32702375 - 32702477
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32702375 atgaaagattaataaatgagactgaaatctaaaggtaattattgtgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 32702474  T
Q  120 ctt 122  Q
    |||    
T  32702475 ctt 32702477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 17175916 - 17175816
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  17175916 atgaaagattaataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 17175817  T
Q  120 c 120  Q
    |    
T  17175816 c 17175816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 18365469 - 18365369
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  18365469 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 18365370  T
Q  120 c 120  Q
    |    
T  18365369 c 18365369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 18370733 - 18370633
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  18370733 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 18370634  T
Q  120 c 120  Q
    |    
T  18370633 c 18370633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 20 - 123
Target Start/End: Complemental strand, 23290976 - 23290873
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | |||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  23290976 atgaaagattaataaatgagactgaaatctaaaggtaattattgtgccatatcattcttgaatctttcttataaaatcatttttgatatctagcattttc 23290877  T
Q  120 ctta 123  Q
    ||||    
T  23290876 ctta 23290873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 20 - 122
Target Start/End: Original strand, 28675318 - 28675420
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||| ||||||||| | |||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  28675318 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 28675417  T
Q  120 ctt 122  Q
    |||    
T  28675418 ctt 28675420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 33695221 - 33695121
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | |||||||||||||||||||||||||| ||| |||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  33695221 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatatcattcttaaatatttcttataaaatcattcttgatatctagcattttc 33695122  T
Q  120 c 120  Q
    |    
T  33695121 c 33695121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 20 - 122
Target Start/End: Complemental strand, 17705363 - 17705262
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||| ||||||||| | |||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  17705363 atgaaaggttaataaatgagactgaaatctaa-ggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 17705265  T
Q  120 ctt 122  Q
    |||    
T  17705264 ctt 17705262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 2309318 - 2309218
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||| ||||||||| | |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||    
T  2309318 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcatcgttgatatctagcattttc 2309219  T
Q  120 c 120  Q
    |    
T  2309218 c 2309218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 23 - 118
Target Start/End: Complemental strand, 6031632 - 6031537
Alignment:
Q  23 aaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcatttt 118  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||| || |||||    
T  6031632 aaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatcttttttataaaatcattcttgatatccagtatttt 6031537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 29693615 - 29693719
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatttt 118  Q
    |||||||  |||||||||| |||||||||||| ||| |||||| ||||||||||||||| ||| |||||| |||||||||||||||||||||||||||||    
T  29693615 atgaaaggataataaataagactgaaatctaagggtcattattctgccatgtcattcttaaatctttcttgataaaatcattcttgatatctagcatttt 29693714  T
Q  119 cctta 123  Q
    |||||    
T  29693715 cctta 29693719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 30 - 123
Target Start/End: Complemental strand, 11548474 - 11548381
Alignment:
Q  30 aataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcctta 123  Q
    ||||||| | |||||||||||| ||||||||||||||||||||||||||||||  |||||   |||||||||||||||||||||||||| ||||    
T  11548474 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatcgttcttgataaatcattcttgatatctagcatttttctta 11548381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 20 - 82
Target Start/End: Complemental strand, 18889539 - 18889477
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaat 82  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  18889539 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaat 18889477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 6127447 - 6127506
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttg 79  Q
    ||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||    
T  6127447 atgaaagattaataaatgagactgaaatctaaaagtgattattgtgccatgtcattcttg 6127506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 33695315 - 33695388
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  33695315 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 33695388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 33696773 - 33696700
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  33696773 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 33696700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 54 - 119
Target Start/End: Complemental strand, 34238948 - 34238883
Alignment:
Q  54 gtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    |||||||||||| |||||||||||||||| ||  | ||||||||||||||||||||||||||||||    
T  34238948 gtgattattgtgtcatgtcattcttgaatcttcttgataaaatcattcttgatatctagcattttc 34238883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 42 - 120
Target Start/End: Complemental strand, 582602 - 582522
Alignment:
Q  42 tgaaatctaaaggtgattattgtgcc-atgtcattcttgaatttttctta-taaaatcattcttgatatctagcattttcc 120  Q
    |||||||||| |||||||||| |||| || |||||||| ||||||||||| ||||||||||||||||||||| ||||||||    
T  582602 tgaaatctaatggtgattattctgcccatatcattcttaaatttttcttaataaaatcattcttgatatctaacattttcc 582522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 6127352 - 6127279
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  6127352 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 6127279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 23291072 - 23291145
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  23291072 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 23291145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 44 - 114
Target Start/End: Original strand, 11548576 - 11548647
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagca 114  Q
    |||||||| |||||||||| |||||||||||||||||||||||||| | |||||  |||||||||| |||||    
T  11548576 aaatctaagggtgattattctgccatgtcattcttgaatttttcttgagaaaatttttcttgatatatagca 11548647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 54 - 116
Target Start/End: Complemental strand, 25986997 - 25986934
Alignment:
Q  54 gtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    ||||||||| |||||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  25986997 gtgattattttgccatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 25986934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 17176009 - 17176082
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| || ||||||||||||||| |||| || |||||||| |||||||||| |||||||    
T  17176009 aaatctaagggtgattattctgtcatgtcattcttgaaattttattgataaaatctttcttgatatatagcatt 17176082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 17705453 - 17705526
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| || |||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  17705453 aaatctaagggtgattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 17705526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 18365561 - 18365634
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttg-aatttttcttataaaatcattcttgatatctagcatt 116  Q
    |||| ||| |||||||||| |||||||||||||||| ||||||| | |||||||| |||||||||| |||||||    
T  18365561 aaatttaagggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcatt 18365634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 18370825 - 18370898
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttg-aatttttcttataaaatcattcttgatatctagcatt 116  Q
    |||| ||| |||||||||| |||||||||||||||| ||||||| | |||||||| |||||||||| |||||||    
T  18370825 aaatttaagggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcatt 18370898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 28675225 - 28675152
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| ||||||||||  | ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  28675225 aaatctaagggtgattattccgacatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 28675152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 18889685 - 18889757
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcatt 116  Q
    |||||||| ||| |||||| |||||||||||||||||| |||||||   ||||| |||||||||| |||||||    
T  18889685 aaatctaagggttattattctgccatgtcattcttgaaattttcttgataaatctttcttgatatatagcatt 18889757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 120
Target Start/End: Complemental strand, 2121059 - 2121004
Alignment:
Q  66 ccatgtcattcttgaat-ttttcttataaaatcattcttgatatctagcattttcc 120  Q
    ||||||||||||||||| |||| ||||||||||||| |||||||||| ||||||||    
T  2121059 ccatgtcattcttgaatctttttttataaaatcatttttgatatctaacattttcc 2121004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 89
Target Start/End: Original strand, 9752233 - 9752278
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt 89  Q
    |||||||| |||||||||| |||||| |||||||||||||||||||    
T  9752233 aaatctaagggtgattattctgccatatcattcttgaatttttctt 9752278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 116
Target Start/End: Original strand, 8515723 - 8515786
Alignment:
Q  54 gtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    ||||||||| ||||||||||||||| ||| | |||| |||||||| |||||||||| |||||||    
T  8515723 gtgattattctgccatgtcattcttaaatctgtcttgataaaatctttcttgatatatagcatt 8515786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 44 - 108
Target Start/End: Complemental strand, 32702282 - 32702217
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttc-ttataaaatcattcttgatat 108  Q
    |||||||| |||||||||| |||||| ||||||||||| ||||| | | |||||| ||||||||||    
T  32702282 aaatctaagggtgattattctgccatatcattcttgaaattttcatgaaaaaatctttcttgatat 32702217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 85; Significance: 1e-40; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 4566 - 4666
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  4566 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatatcattcttaaatttttcttataaaatcattcttgatatctagcattttc 4665  T
Q  120 c 120  Q
    |    
T  4666 c 4666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 4473 - 4400
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| | |||||| |||||||||| |||||||    
T  4473 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcatt 4400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 85; Significance: 1e-40; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 11791 - 11891
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  11791 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaacattttc 11890  T
Q  120 c 120  Q
    |    
T  11891 c 11891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 11698 - 11625
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  11698 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 11625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 81; Significance: 3e-38; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 48019 - 48119
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | |||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  48019 atgaaagattaataaatgagactgaaatctaaagatgattattgtgctatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 48118  T
Q  120 c 120  Q
    |    
T  48119 c 48119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 47927 - 47854
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| |||||||||  |||||||    
T  47927 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgataaatagcatt 47854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 80; Significance: 1e-37; HSPs: 2)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 13012 - 13115
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | |||||||||||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||     
T  13012 atgaaagattaataaatgagactgaaatctaaaggtaattattgtgtcatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttt 13111  T
Q  120 ctta 123  Q
    ||||    
T  13112 ctta 13115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 12919 - 12846
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| | |||||||| |||||||||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  12919 aaatctaaggatgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 12846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 77; Significance: 7e-36; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 41180 - 41280
Alignment:
Q  20 atgaaagattaataaataatactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 119  Q
    ||||||||||||||||| | ||||||||||||||||||||||||| |||| ||||||||| || ||||||||||||||||||||||||||||||||||||    
T  41180 atgaaagattaataaatgagactgaaatctaaaggtgattattgtaccatatcattcttggatctttcttataaaatcattcttgatatctagcattttc 41279  T
Q  120 c 120  Q
    |    
T  41280 c 41280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 41088 - 41015
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttg-aatttttcttataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| |||||||||||||||| ||||||| | |||||||| |||||||||| |||||||    
T  41088 aaatctaagggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcatt 41015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 3145 - 3072
Alignment:
Q  44 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 116  Q
    |||||||| |||||||||| ||||||||||||||| || |||| || |||||||| |||||||||| |||||||    
T  3145 aaatctaagggtgattattctgccatgtcattcttaaaattttattgataaaatctttcttgatatatagcatt 3072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 120
Target Start/End: Original strand, 85577 - 85642
Alignment:
Q  54 gtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 120  Q
    |||||||||||||||||| ||| || ||| ||||  || ||||||||||||||||||||||||||||    
T  85577 gtgattattgtgccatgttattttttaatctttca-atcaaatcattcttgatatctagcattttcc 85642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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