View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17752_high_27 (Length: 248)

Name: NF17752_high_27
Description: NF17752
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17752_high_27
NF17752_high_27
[»] chr4 (51 HSPs)
chr4 (1-240)||(34570788-34571027)
chr4 (1-196)||(9927835-9928039)
chr4 (3-107)||(26363735-26363839)
chr4 (1-107)||(6655426-6655532)
chr4 (1-196)||(12745790-12745994)
chr4 (12-107)||(54882510-54882605)
chr4 (1-107)||(5429368-5429474)
chr4 (1-107)||(36314814-36314920)
chr4 (1-107)||(36329023-36329129)
chr4 (1-107)||(37740314-37740420)
chr4 (1-107)||(46570118-46570224)
chr4 (1-99)||(50674438-50674536)
chr4 (1-107)||(52095734-52095841)
chr4 (31-240)||(12739942-12740160)
chr4 (31-240)||(12748148-12748366)
chr4 (1-107)||(8689080-8689187)
chr4 (1-107)||(25861616-25861723)
chr4 (1-107)||(27417543-27417649)
chr4 (1-107)||(40630454-40630560)
chr4 (1-107)||(41639035-41639141)
chr4 (1-107)||(5268783-5268890)
chr4 (1-84)||(54200280-54200363)
chr4 (1-107)||(54867586-54867692)
chr4 (1-107)||(5148084-5148191)
chr4 (1-107)||(6742999-6743105)
chr4 (31-105)||(26176028-26176102)
chr4 (2-95)||(50263291-50263383)
chr4 (31-107)||(2209190-2209266)
chr4 (1-107)||(36994248-36994354)
chr4 (31-107)||(56179028-56179105)
chr4 (31-107)||(35661909-35661985)
chr4 (1-107)||(5396274-5396381)
chr4 (2-107)||(3777956-3778062)
chr4 (31-107)||(5370479-5370556)
chr4 (1-96)||(16622887-16622984)
chr4 (1-107)||(16628455-16628563)
chr4 (1-84)||(29254205-29254288)
chr4 (1-107)||(5143667-5143774)
chr4 (17-104)||(24968801-24968888)
chr4 (1-107)||(3909785-3909890)
chr4 (1-84)||(52083031-52083115)
chr4 (1-84)||(52094038-52094122)
chr4 (27-84)||(30000873-30000931)
chr4 (131-196)||(3754603-3754668)
chr4 (16-107)||(38152020-38152113)
chr4 (31-105)||(10047801-10047876)
chr4 (70-107)||(13992731-13992768)
chr4 (31-84)||(48142763-48142817)
chr4 (1-84)||(31985240-31985325)
chr4 (7-48)||(39773981-39774022)
chr4 (31-103)||(55085955-55086027)
[»] chr7 (45 HSPs)
chr7 (1-240)||(47674317-47674566)
chr7 (1-107)||(47676510-47676616)
chr7 (2-107)||(27347612-27347716)
chr7 (1-104)||(6360504-6360607)
chr7 (1-107)||(4538925-4539031)
chr7 (7-107)||(43863949-43864049)
chr7 (1-107)||(14070207-14070314)
chr7 (1-107)||(14380235-14380342)
chr7 (1-100)||(18126339-18126438)
chr7 (1-107)||(2647281-2647387)
chr7 (1-107)||(23554727-23554834)
chr7 (1-107)||(2389762-2389868)
chr7 (1-196)||(4585751-4585955)
chr7 (1-84)||(2761676-2761759)
chr7 (1-104)||(26417004-26417107)
chr7 (4-107)||(32358431-32358534)
chr7 (1-100)||(33332041-33332140)
chr7 (2-84)||(1113367-1113449)
chr7 (1-107)||(19495657-19495765)
chr7 (1-105)||(48489120-48489224)
chr7 (7-107)||(4178462-4178563)
chr7 (11-107)||(4796253-4796349)
chr7 (1-84)||(48491289-48491372)
chr7 (1-97)||(21983649-21983746)
chr7 (18-107)||(30026391-30026479)
chr7 (1-104)||(6570284-6570387)
chr7 (31-97)||(31733354-31733420)
chr7 (12-107)||(49092108-49092205)
chr7 (16-107)||(2479757-2479849)
chr7 (1-84)||(24515134-24515218)
chr7 (1-81)||(35853626-35853707)
chr7 (32-107)||(2361562-2361638)
chr7 (1-84)||(46515915-46515998)
chr7 (18-107)||(47264066-47264156)
chr7 (1-94)||(496368-496461)
chr7 (31-107)||(29608222-29608299)
chr7 (4-107)||(21989317-21989420)
chr7 (1-57)||(44847760-44847816)
chr7 (190-240)||(48491146-48491196)
chr7 (63-107)||(48599932-48599976)
chr7 (130-208)||(47676649-47676726)
chr7 (12-107)||(79807-79904)
chr7 (70-107)||(25767398-25767435)
chr7 (106-166)||(1113296-1113356)
chr7 (187-242)||(9189464-9189520)
[»] chr3 (58 HSPs)
chr3 (1-242)||(29812606-29812857)
chr3 (2-107)||(4569421-4569526)
chr3 (1-107)||(5236831-5236937)
chr3 (1-107)||(43404325-43404431)
chr3 (1-107)||(55302557-55302662)
chr3 (1-166)||(49200043-49200218)
chr3 (1-104)||(6096192-6096295)
chr3 (1-107)||(34490702-34490808)
chr3 (1-107)||(43402382-43402488)
chr3 (4-242)||(44331113-44331360)
chr3 (1-107)||(31340634-31340741)
chr3 (1-107)||(29810556-29810662)
chr3 (1-107)||(40592355-40592461)
chr3 (1-107)||(54593174-54593280)
chr3 (1-107)||(40912807-40912913)
chr3 (1-107)||(46173204-46173309)
chr3 (1-107)||(7761952-7762058)
chr3 (7-107)||(7764139-7764240)
chr3 (2-107)||(36029501-36029607)
chr3 (16-107)||(5258533-5258625)
chr3 (1-107)||(9636502-9636609)
chr3 (1-107)||(44331821-44331927)
chr3 (1-97)||(40845060-40845157)
chr3 (31-107)||(36018332-36018408)
chr3 (1-100)||(1735884-1735983)
chr3 (1-107)||(8370062-8370169)
chr3 (1-107)||(16264755-16264862)
chr3 (1-107)||(21711608-21711715)
chr3 (2-107)||(27027113-27027220)
chr3 (1-107)||(39032128-39032235)
chr3 (6-107)||(40735115-40735218)
chr3 (1-107)||(45094851-45094958)
chr3 (1-107)||(8127037-8127143)
chr3 (1-67)||(24694779-24694845)
chr3 (7-100)||(27038454-27038548)
chr3 (19-107)||(3393294-3393382)
chr3 (1-105)||(48438622-48438727)
chr3 (1-107)||(40734184-40734292)
chr3 (1-107)||(33386248-33386355)
chr3 (31-104)||(51398517-51398590)
chr3 (1-107)||(30709368-30709476)
chr3 (1-95)||(47923487-47923583)
chr3 (1-107)||(27986049-27986156)
chr3 (1-107)||(37726081-37726188)
chr3 (18-107)||(16498754-16498840)
chr3 (16-84)||(5260712-5260781)
chr3 (1-57)||(37408197-37408253)
chr3 (184-240)||(40734974-40735030)
chr3 (1-107)||(27453363-27453470)
chr3 (188-242)||(5258696-5258750)
chr3 (1-107)||(23410704-23410810)
chr3 (2-107)||(35925898-35926004)
chr3 (20-60)||(53921879-53921919)
chr3 (135-240)||(7763998-7764102)
chr3 (188-242)||(9634871-9634925)
chr3 (1-53)||(25929023-25929075)
chr3 (130-189)||(29810464-29810523)
chr3 (18-67)||(27974566-27974615)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-107)||(80875-80981)
[»] chr8 (39 HSPs)
chr8 (1-107)||(15212474-15212580)
chr8 (1-107)||(30143030-30143136)
chr8 (1-107)||(42435583-42435689)
chr8 (1-107)||(22976004-22976110)
chr8 (1-107)||(27810986-27811092)
chr8 (1-107)||(40221234-40221340)
chr8 (1-107)||(43036111-43036217)
chr8 (1-107)||(12703013-12703119)
chr8 (1-104)||(11383479-11383582)
chr8 (1-107)||(4733513-4733619)
chr8 (1-107)||(1746592-1746699)
chr8 (6-84)||(4283039-4283117)
chr8 (1-107)||(4731346-4731452)
chr8 (1-103)||(34254702-34254805)
chr8 (1-107)||(34256878-34256985)
chr8 (3-107)||(4743569-4743674)
chr8 (1-107)||(10014847-10014953)
chr8 (7-107)||(42497902-42498003)
chr8 (1-104)||(31217947-31218051)
chr8 (1-107)||(5702063-5702170)
chr8 (1-107)||(19945713-19945820)
chr8 (2-107)||(1345744-1345850)
chr8 (1-107)||(19175316-19175423)
chr8 (1-55)||(4696264-4696318)
chr8 (1-84)||(17982363-17982447)
chr8 (4-60)||(33351885-33351941)
chr8 (1-84)||(19948695-19948779)
chr8 (131-208)||(33351749-33351825)
chr8 (16-84)||(44303564-44303633)
chr8 (1-83)||(3051528-3051610)
chr8 (15-107)||(4456429-4456522)
chr8 (190-240)||(4733372-4733422)
chr8 (33-107)||(10929493-10929567)
chr8 (1-55)||(23799212-23799266)
chr8 (204-242)||(34254895-34254933)
chr8 (72-107)||(2627429-2627464)
chr8 (31-96)||(7412764-7412830)
chr8 (194-240)||(41365393-41365439)
chr8 (70-107)||(1261525-1261562)
[»] chr5 (36 HSPs)
chr5 (1-107)||(42426609-42426715)
chr5 (1-196)||(32636414-32636618)
chr5 (1-107)||(13487893-13487997)
chr5 (1-84)||(535614-535697)
chr5 (1-107)||(13239440-13239546)
chr5 (3-107)||(5057519-5057623)
chr5 (4-84)||(39468909-39468989)
chr5 (1-84)||(19806117-19806200)
chr5 (1-84)||(27015025-27015108)
chr5 (1-107)||(37438833-37438940)
chr5 (31-107)||(38746458-38746534)
chr5 (31-107)||(42428822-42428898)
chr5 (1-103)||(16650996-16651098)
chr5 (31-107)||(30683312-30683388)
chr5 (1-107)||(11916555-11916662)
chr5 (19-107)||(40146737-40146825)
chr5 (1-95)||(12083773-12083868)
chr5 (1-107)||(14520636-14520743)
chr5 (1-84)||(25412472-25412556)
chr5 (1-107)||(31004737-31004844)
chr5 (19-107)||(9352918-9353007)
chr5 (1-84)||(13342771-13342855)
chr5 (1-80)||(30182302-30182382)
chr5 (31-84)||(533492-533545)
chr5 (3-47)||(38746535-38746579)
chr5 (1-48)||(16649997-16650044)
chr5 (18-57)||(36931984-36932023)
chr5 (16-84)||(36074433-36074503)
chr5 (71-107)||(213032-213068)
chr5 (203-240)||(13487765-13487802)
chr5 (132-193)||(16651137-16651198)
chr5 (71-107)||(30683269-30683305)
chr5 (72-107)||(28751027-28751062)
chr5 (31-84)||(15464958-15465012)
chr5 (73-107)||(30631804-30631838)
chr5 (70-107)||(24136336-24136373)
[»] chr1 (39 HSPs)
chr1 (1-242)||(31658782-31659032)
chr1 (1-107)||(44454847-44454953)
chr1 (1-107)||(11348189-11348295)
chr1 (1-107)||(37033661-37033767)
chr1 (1-107)||(37879483-37879589)
chr1 (1-107)||(28220600-28220707)
chr1 (3-107)||(28223797-28223902)
chr1 (5-103)||(193086-193184)
chr1 (3-107)||(3156555-3156658)
chr1 (1-83)||(29135762-29135844)
chr1 (1-107)||(49918037-49918143)
chr1 (1-107)||(37070174-37070281)
chr1 (7-107)||(3189038-3189140)
chr1 (7-107)||(3197855-3197957)
chr1 (7-107)||(3206673-3206775)
chr1 (3-107)||(13598809-13598914)
chr1 (1-107)||(20762359-20762466)
chr1 (1-84)||(30476822-30476905)
chr1 (1-107)||(10924911-10925017)
chr1 (1-104)||(1833212-1833316)
chr1 (1-107)||(3282113-3282220)
chr1 (1-107)||(4553022-4553128)
chr1 (1-84)||(13316692-13316776)
chr1 (1-84)||(13547681-13547763)
chr1 (1-84)||(13549592-13549674)
chr1 (1-107)||(13604206-13604313)
chr1 (1-54)||(29652220-29652273)
chr1 (7-86)||(21536175-21536255)
chr1 (18-107)||(13659694-13659780)
chr1 (1-84)||(46064629-46064712)
chr1 (24-105)||(16124245-16124327)
chr1 (1-107)||(16455334-16455440)
chr1 (130-196)||(30476939-30477005)
chr1 (16-104)||(22819852-22819940)
chr1 (16-54)||(15820048-15820086)
chr1 (1-107)||(26644484-26644588)
chr1 (1-107)||(19361023-19361131)
chr1 (72-107)||(9986896-9986931)
chr1 (70-107)||(19365879-19365916)
[»] chr2 (31 HSPs)
chr2 (4-107)||(2837221-2837324)
chr2 (3-107)||(20522631-20522735)
chr2 (1-107)||(34389257-34389364)
chr2 (3-107)||(36318385-36318490)
chr2 (16-107)||(36988464-36988556)
chr2 (1-101)||(35447475-35447575)
chr2 (1-107)||(21630352-21630458)
chr2 (12-100)||(14698600-14698688)
chr2 (31-107)||(39284585-39284661)
chr2 (1-107)||(33528207-33528314)
chr2 (1-107)||(39483283-39483390)
chr2 (1-84)||(5723628-5723712)
chr2 (2-100)||(10706843-10706942)
chr2 (6-100)||(17865589-17865684)
chr2 (1-107)||(45099442-45099549)
chr2 (1-107)||(33118542-33118648)
chr2 (1-100)||(23078062-23078162)
chr2 (1-107)||(28258761-28258868)
chr2 (31-107)||(29867567-29867644)
chr2 (1-84)||(2334791-2334875)
chr2 (16-84)||(4503521-4503590)
chr2 (31-107)||(6595398-6595475)
chr2 (12-106)||(8389732-8389828)
chr2 (16-84)||(36206054-36206123)
chr2 (33-107)||(17863880-17863955)
chr2 (7-107)||(40015319-40015419)
chr2 (1-54)||(13569737-13569789)
chr2 (1-107)||(30833032-30833140)
chr2 (184-242)||(39483476-39483535)
chr2 (70-107)||(25410118-25410155)
chr2 (71-107)||(7450870-7450905)
[»] scaffold0286 (1 HSPs)
scaffold0286 (1-107)||(11028-11134)
[»] chr6 (37 HSPs)
chr6 (2-107)||(603612-603717)
chr6 (3-107)||(22964107-22964211)
chr6 (3-107)||(23824182-23824286)
chr6 (1-107)||(9183384-9183490)
chr6 (1-107)||(21593136-21593242)
chr6 (12-105)||(26661421-26661514)
chr6 (12-105)||(26767392-26767485)
chr6 (4-107)||(3809304-3809404)
chr6 (1-107)||(5571848-5571954)
chr6 (1-107)||(24435556-24435662)
chr6 (1-107)||(31979924-31980030)
chr6 (1-107)||(18234490-18234597)
chr6 (1-99)||(10076783-10076881)
chr6 (1-107)||(5407282-5407389)
chr6 (1-107)||(5411607-5411714)
chr6 (38-105)||(17759427-17759494)
chr6 (1-107)||(5017078-5017186)
chr6 (1-84)||(5413822-5413906)
chr6 (1-107)||(31086055-31086163)
chr6 (1-88)||(26954677-26954764)
chr6 (1-84)||(5406572-5406656)
chr6 (1-84)||(5410897-5410981)
chr6 (1-84)||(16452814-16452898)
chr6 (1-84)||(30834911-30834995)
chr6 (1-84)||(33160728-33160812)
chr6 (4-107)||(21272573-21272676)
chr6 (1-107)||(24714779-24714884)
chr6 (20-99)||(5757070-5757150)
chr6 (1-99)||(23896739-23896838)
chr6 (1-107)||(33211559-33211664)
chr6 (1-84)||(31405048-31405132)
chr6 (16-54)||(16452718-16452756)
chr6 (188-240)||(5407497-5407549)
chr6 (188-240)||(5411822-5411874)
chr6 (188-240)||(5406729-5406781)
chr6 (188-240)||(5411054-5411106)
chr6 (70-107)||(22709497-22709534)
[»] scaffold0176 (1 HSPs)
scaffold0176 (1-105)||(17638-17742)
[»] scaffold0066 (1 HSPs)
scaffold0066 (1-103)||(20789-20891)
[»] scaffold0006 (4 HSPs)
scaffold0006 (1-107)||(2900-3007)
scaffold0006 (3-107)||(6094-6199)
scaffold0006 (1-107)||(132863-132970)
scaffold0006 (18-107)||(149455-149541)
[»] scaffold0002 (1 HSPs)
scaffold0002 (16-107)||(434219-434312)
[»] scaffold0087 (2 HSPs)
scaffold0087 (12-107)||(36416-36512)
scaffold0087 (20-99)||(43553-43633)
[»] scaffold0016 (1 HSPs)
scaffold0016 (16-103)||(114278-114365)
[»] scaffold0098 (1 HSPs)
scaffold0098 (19-107)||(45623-45712)
[»] scaffold0466 (1 HSPs)
scaffold0466 (1-84)||(6820-6903)
[»] scaffold0510 (1 HSPs)
scaffold0510 (18-99)||(1202-1284)
[»] scaffold0140 (1 HSPs)
scaffold0140 (1-57)||(8052-8108)
[»] scaffold0036 (1 HSPs)
scaffold0036 (71-100)||(86066-86095)


Alignment Details
Target: chr4 (Bit Score: 228; Significance: 1e-126; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 34570788 - 34571027
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34570788 tcgtgacacgtttggtgcgtacgacccaaggtacaaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 34570887  T
Q  101 tcacgatgcaaaacatgctttcggcgttggaaaatcgtgacacgcttgctaaaccgtgtcacgattctattcatccccaacttcacaaatttgaaggcaa 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  34570888 tcacgatgcaaaacatgctttcggcgttggaaaatcgtgacacgcttgctaaatcgtgtcacgattctgttcatccccaacttcacaaatttgaaggcaa 34570987  T
Q  201 aaacaacattctccaccttaacttcaaattgatgatgatg 240  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  34570988 aaacaacattctccaccttaacttcaaattgatgatgatg 34571027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 9927835 - 9928039
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  9927835 tcgtgacacgtttggtgcgtacgacccaaggaacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacattttcccaaaatcgtg 9927934  T
Q  101 tcacgat----------gcaaaacatgctttcggcgttggaaaatcgtgacacgcttgctaaaccgtgtcacgattctattcatccccaacttcacaaat 190  Q
    |||||||          |||||||||| |  | || | | |||||||||| ||||||| ||||  |||||||||||||  |||| | |||||||||||||    
T  9927935 tcacgattgaacaccctgcaaaacatgttcactgcctag-aaaatcgtgatacgcttgttaaattgtgtcacgattcttatcattctcaacttcacaaat 9928033  T
Q  191 ttgaag 196  Q
    ||||||    
T  9928034 ttgaag 9928039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 3 - 107
Target Start/End: Complemental strand, 26363839 - 26363735
Alignment:
Q  3 gtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtc 102  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  26363839 gtgacacgtttggtgcgtacgacccaaggtatgaccaaccttatcctgaaaacttgctcagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtc 26363740  T
Q  103 acgat 107  Q
    |||||    
T  26363739 acgat 26363735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 6655532 - 6655426
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||| ||||||||||||    
T  6655532 tcgtgacacgtttggtgcgtacgacccaatgtacgaccaaccttatcctgaaaacttgcccagcaaaccgaaaatcgtgtcacatttccccaaaatcgtg 6655433  T
Q  101 tcacgat 107  Q
    |||||||    
T  6655432 tcacgat 6655426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 12745790 - 12745994
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctg-aaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgt 99  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| |    
T  12745790 tcgtgacacgattggcgcgtacgacccaaggtacgaccaaccttatcctggaaaacttgcccagcaagccgaaaatcgtgtcacgttttcccaaaatcat 12745889  T
Q  100 gtcacgat----------gcaaaacatgctttcggcgttggaaaatcgtgacacgcttgctaaaccgtgtcacgattctattcatccccaacttcacaaa 189  Q
    ||||||||          || ||||| |||  | || | | ||||||||| ||||||||||||| ||||||||||||||  |||| | ||||||||||||    
T  12745890 gtcacgattggacaccctgccaaaca-gctcactgcctag-aaaatcgtgtcacgcttgctaaatcgtgtcacgattcttatcattctcaacttcacaaa 12745987  T
Q  190 tttgaag 196  Q
    |||||||    
T  12745988 tttgaag 12745994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 12 - 107
Target Start/End: Complemental strand, 54882605 - 54882510
Alignment:
Q  12 ttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgat 107  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  54882605 ttggtgcgtacgacccaaggtacgatcaaccttatcctgaaaacgtgtccaacaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgat 54882510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 5429474 - 5429368
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||| ||||||||| |||||||||||||||||||||    
T  5429474 tcgtgacacgattggtgcgtacgacccaaggtacgaccaatcttaacctgaaaacttgtccaacaagctgaaaatcgtatcacgttttcccaaaatcgtg 5429375  T
Q  101 tcacgat 107  Q
    |||||||    
T  5429374 tcacgat 5429368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 36314920 - 36314814
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||| || ||||||||  |||||||||||||||||||||||||||||||    
T  36314920 tcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtgcccagcaagttgaaaatcgtgtcacgttttcccaaaatcgtg 36314821  T
Q  101 tcacgat 107  Q
     ||||||    
T  36314820 acacgat 36314814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 36329129 - 36329023
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||| || ||||||||  |||||||||||||||||||||||||||||||    
T  36329129 tcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtgcccagcaagttgaaaatcgtgtcacgttttcccaaaatcgtg 36329030  T
Q  101 tcacgat 107  Q
     ||||||    
T  36329029 acacgat 36329023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 37740420 - 37740314
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||||    
T  37740420 tcgtgacacatttggtgtgtacgacccaaggtacgaccaaccttatcctgaaaacttgccctgcaagccgaaaatcatgtcacgttttcccaaaatcgtg 37740321  T
Q  101 tcacgat 107  Q
    | |||||    
T  37740320 ttacgat 37740314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 46570118 - 46570224
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||| ||    
T  46570118 tcgtgacacgtttgatgcgtacgacccaaagtacgaccaaccttatcctgaaaatttgcccagcaagccgaaaattgtgtcacgttttcccaaaatcttg 46570217  T
Q  101 tcacgat 107  Q
    |||||||    
T  46570218 tcacgat 46570224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 50674438 - 50674536
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgt 99  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||| ||||||| ||||||||||||||||||||||    
T  50674438 tcgtgacacgtttggtgcgtacgacccaaggtacaaccaaccttatcctgaaaacgtgcccagcaagctgaaaatcatgtcacgttttcccaaaatcgt 50674536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 52095734 - 52095841
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgt 99  Q
    ||||| |||| ||| ||| ||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||    
T  52095734 tcgtgtcacgattgatgcttacgacccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacgttttcccaaaatcgt 52095833  T
Q  100 gtcacgat 107  Q
    ||||||||    
T  52095834 gtcacgat 52095841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 31 - 240
Target Start/End: Original strand, 12739942 - 12740160
Alignment:
Q  31 gtacgaccaaccttatcctgaaaa-cttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgat----------gcaaaacatgct 119  Q
    |||||||||||||||||||||||| |||| |||||||||| ||||| |||| ||||||||||||||||||||| || |          |||||||| |||    
T  12739942 gtacgaccaaccttatcctgaaaaacttgcccagcaagccaaaaattgtgttacgttttcccaaaatcgtgtcgcggttggacaccctgcaaaaca-gct 12740040  T
Q  120 ttcggcgttggaaaatcgtgacacgcttgctaaaccgtgtcacgattctattcatccccaacttcacaaatttgaaggcaaaaacaacattctccacctt 219  Q
        || | | |||||||||||||| |||||||| ||||||||||||||  |||| | |||||||||||||||||||||| | |||||||||||||||||    
T  12740041 cagtgcctag-aaaatcgtgacacgtttgctaaatcgtgtcacgattcttatcattctcaacttcacaaatttgaaggcatacacaacattctccacctt 12740139  T
Q  220 aacttcaaattgatgatgatg 240  Q
     ||||||||||||| ||||||    
T  12740140 gacttcaaattgataatgatg 12740160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 31 - 240
Target Start/End: Original strand, 12748148 - 12748366
Alignment:
Q  31 gtacgaccaaccttatcctgaaaa-cttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgat----------gcaaaacatgct 119  Q
    |||||||||||||||||||||||| |||| |||||||||| ||||| |||| ||||||||||||||||||||| || |          |||||||| |||    
T  12748148 gtacgaccaaccttatcctgaaaaacttgcccagcaagccaaaaattgtgttacgttttcccaaaatcgtgtcgcggttggacaccctgcaaaaca-gct 12748246  T
Q  120 ttcggcgttggaaaatcgtgacacgcttgctaaaccgtgtcacgattctattcatccccaacttcacaaatttgaaggcaaaaacaacattctccacctt 219  Q
        || | | |||||||||||||| |||||||| ||||||||||||||  |||| | |||||||||||||||||||||| | |||||||||||||||||    
T  12748247 cagtgcctag-aaaatcgtgacacgtttgctaaatcgtgtcacgattcttatcattctcaacttcacaaatttgaaggcatacacaacattctccacctt 12748345  T
Q  220 aacttcaaattgatgatgatg 240  Q
     ||||||||||||| ||||||    
T  12748346 gacttcaaattgataatgatg 12748366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 8689187 - 8689080
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaag-ccgaaaatcgtgtcacgttttcccaaaatcgt 99  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||||| |  ||||||||   ||||||||||||||||||||||||||||||    
T  8689187 tcgtggcacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtacccagcaagtttgaaaatcgtgtcacgttttcccaaaatcgt 8689088  T
Q  100 gtcacgat 107  Q
    ||||||||    
T  8689087 gtcacgat 8689080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 25861723 - 25861616
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacg-ttttcccaaaatcgt 99  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||| || ||||||||  ||||||||||||||| |||||||||||||||    
T  25861723 tcgtgacacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaacatgcccagcaagttgaaaatcgtgtcacgtttttcccaaaatcgt 25861624  T
Q  100 gtcacgat 107  Q
    | ||||||    
T  25861623 gacacgat 25861616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 27417543 - 27417649
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||| | || | | ||||  |||||||||||||||||||||||||||||||    
T  27417543 tcgtgacacggttgatgcgtacgacccaaggtacgaccaaccttatcctgaaaccgtgccgaacaagttgaaaatcgtgtcacgttttcccaaaatcgtg 27417642  T
Q  101 tcacgat 107  Q
    |||||||    
T  27417643 tcacgat 27417649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 40630560 - 40630454
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||||||||||||||||| || |||||||||||||||||||||||| |||||||  || | ||||||| |||||||||||||||||||||||||||||||    
T  40630560 tcgtgacacgtttggtgcatatgacccaaggtacgaccaaccttattctgaaaatgtgcctagcaagctgaaaatcgtgtcacgttttcccaaaatcgtg 40630461  T
Q  101 tcacgat 107  Q
     ||||||    
T  40630460 acacgat 40630454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 41639141 - 41639035
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||||||||  ||| |||||||||||||||||||||||||||||||||||||||| || ||| ||||  ||||||||||||||||||| |||||||||||    
T  41639141 tcgtgacacagttgatgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtgcccaacaagttgaaaatcgtgtcacgtttttccaaaatcgtg 41639042  T
Q  101 tcacgat 107  Q
    |||||||    
T  41639041 tcacgat 41639035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 5268890 - 5268783
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaag-ccgaaaatcgtgtcacgttttcccaaaatcgt 99  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |  ||| ||||   ||||||||||||||||||||||||||||||    
T  5268890 tcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtacccaacaagtttgaaaatcgtgtcacgttttcccaaaatcgt 5268791  T
Q  100 gtcacgat 107  Q
    | ||||||    
T  5268790 gacacgat 5268783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 54200280 - 54200363
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacg 84  Q
    |||||||  |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  54200280 tcgtgactagtttggtgcgtacgacccaaggtacgaccaaccttatcttgaaaacttgcccagcaagccgaaaatcgtgtcacg 54200363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 54867586 - 54867692
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||  ||||| || ||||||||  ||||||||||||||||||||||||||| |||    
T  54867586 tcgtgacacgattggtgcgtacgatccaaggtacgaccaaccttatccgaaaaacgtgcccagcaagttgaaaatcgtgtcacgttttcccaaaattgtg 54867685  T
Q  101 tcacgat 107  Q
     ||||||    
T  54867686 acacgat 54867692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 5148084 - 5148191
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaag-ccgaaaatcgtgtcacgttttcccaaaatcgt 99  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||| |||   ||||||||||||| |||||| |||||||||    
T  5148084 tcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtatccagtaagtttgaaaatcgtgtcaagttttcacaaaatcgt 5148183  T
Q  100 gtcacgat 107  Q
    | ||||||    
T  5148184 gccacgat 5148191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 6743105 - 6742999
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||||||||| || ||||||||| ||||||||||||||||||||||||||||||| || ||| ||||   ||||||||||||||||||||||||| ||||    
T  6743105 tcgtgacacgattagtgcgtacgtcccaaggtacgaccaaccttatcctgaaaacgtgcccaacaagtttaaaatcgtgtcacgttttcccaaaaacgtg 6743006  T
Q  101 tcacgat 107  Q
     ||||||    
T  6743005 ccacgat 6742999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 105
Target Start/End: Original strand, 26176028 - 26176102
Alignment:
Q  31 gtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacg 105  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||||    
T  26176028 gtacgaccaaccttatcctgaaaacttgcccatcaagccgaaaatcgtgtcacgttttcccaaaattgtgtcacg 26176102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 50263291 - 50263383
Alignment:
Q  2 cgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaa 95  Q
    |||||||| |||||||||||||||| ||||||||||||||||||| ||||||||||  ||| ||||||||||||||||| ||||||||||||||    
T  50263291 cgtgacacatttggtgcgtacgacc-aaggtacgaccaaccttattctgaaaacttacccaccaagccgaaaatcgtgttacgttttcccaaaa 50263383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 31 - 107
Target Start/End: Complemental strand, 2209266 - 2209190
Alignment:
Q  31 gtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgat 107  Q
    |||||||||||||||||||||||||||| | ||||| |||||||||||||||||||| |||||||||||||||||||    
T  2209266 gtacgaccaaccttatcctgaaaacttgcctagcaaaccgaaaatcgtgtcacgtttccccaaaatcgtgtcacgat 2209190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 36994354 - 36994248
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||||||||| ||||||||||||||| ||||||||| ||||||||||  |||||| || | |||||||||||||| ||| |||||||||| ||||| |||    
T  36994354 tcgtgacacggttggtgcgtacgacctaaggtacgatcaaccttatctagaaaacgtgcctagcaagccgaaaattgtgacacgttttccaaaaattgtg 36994255  T
Q  101 tcacgat 107  Q
    |||||||    
T  36994254 tcacgat 36994248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 31 - 107
Target Start/End: Original strand, 56179028 - 56179105
Alignment:
Q  31 gtacgaccaaccttatcctgaaaa-cttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgat 107  Q
    |||||||||||||||||||||||| |||| |||||||||| |||||| ||||||||||||||||||||||||||||||    
T  56179028 gtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcatgtcacgttttcccaaaatcgtgtcacgat 56179105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 31 - 107
Target Start/End: Complemental strand, 35661985 - 35661909
Alignment:
Q  31 gtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgat 107  Q
    ||||||||||||||||||||||||| || ||| |||||||||||||||| ||| |||||||||||||||||||||||    
T  35661985 gtacgaccaaccttatcctgaaaacgtgcccaacaagccgaaaatcgtgacacattttcccaaaatcgtgtcacgat 35661909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 5396381 - 5396274
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaag-ccgaaaatcgtgtcacgttttcccaaaatcgt 99  Q
    ||||| |||| ||||||||||||||||||||||||| |||||||||||||||||| |  ||| ||||   ||||||||||||||||||| ||||||||||    
T  5396381 tcgtggcacgattggtgcgtacgacccaaggtacgatcaaccttatcctgaaaacatacccaacaagtttgaaaatcgtgtcacgtttttccaaaatcgt 5396282  T
Q  100 gtcacgat 107  Q
    | ||||||    
T  5396281 gacacgat 5396274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 3777956 - 3778062
Alignment:
Q  2 cgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagc-aagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||| |||| |||||||||||||||||||||||||||||||||||| ||||||| |  | ||| ||   |||||||||||||||||||||||||||||||    
T  3777956 cgtggcacgattggtgcgtacgacccaaggtacgaccaaccttatcttgaaaacgtaccgagcaaatttgaaaatcgtgtcacgttttcccaaaatcgtg 3778055  T
Q  101 tcacgat 107  Q
     ||||||    
T  3778056 acacgat 3778062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 31 - 107
Target Start/End: Original strand, 5370479 - 5370556
Alignment:
Q  31 gtacgaccaaccttatcctgaaaa-cttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgat 107  Q
    |||||||||||||||||||||||  |||| |||||||||| |||||||||||||| ||||||||||||||||||||||    
T  5370479 gtacgaccaaccttatcctgaaagtcttgcccagcaagccaaaaatcgtgtcacgatttcccaaaatcgtgtcacgat 5370556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 16622984 - 16622887
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctg-aaaacttgtccagcaag-ccgaaaatcgtgtcacgttttcccaaaat 96  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| |  | ||||||   |||||||||||||||||||||||||||    
T  16622984 tcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaaacgtacctagcaagtttgaaaatcgtgtcacgttttcccaaaat 16622887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 16628563 - 16628455
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctg-aaaacttgtccagcaag-ccgaaaatcgtgtcacgttttcccaaaatcg 98  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| || ||||  |  | ||||||   |||||||||||||||||||||||||||||    
T  16628563 tcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcatgaaaaaagtaacaagcaagtttgaaaatcgtgtcacgttttcccaaaatcg 16628464  T
Q  99 tgtcacgat 107  Q
    || ||||||    
T  16628463 tgacacgat 16628455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 29254288 - 29254205
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacg 84  Q
    |||||||||||||||||||||||| ||||  ||||||||||||||| ||||| ||||| ||| ||||||||||||| |||||||    
T  29254288 tcgtgacacgtttggtgcgtacgatccaaaatacgaccaaccttattctgaatacttgcccaacaagccgaaaatcatgtcacg 29254205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 5143667 - 5143774
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaag-ccgaaaatcgtgtcacgttttcccaaaatcgt 99  Q
    |||||||||| |||||||| || ||||||||| |||||||||||||||||||||| |  ||| ||||   |||||||||||||| ||||| |||||||||    
T  5143667 tcgtgacacgattggtgcgcacaacccaaggtgcgaccaaccttatcctgaaaacgtacccaacaagtttgaaaatcgtgtcacattttcacaaaatcgt 5143766  T
Q  100 gtcacgat 107  Q
    | ||||||    
T  5143767 gccacgat 5143774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 24968888 - 24968801
Alignment:
Q  17 gcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcac 104  Q
    ||||||||||||| ||||||||||||||||||||||||| |||| |||| ||  || ||||||||||| || | ||||||||||||||    
T  24968888 gcgtacgacccaatgtacgaccaaccttatcctgaaaacgtgtcaagcatgctaaatatcgtgtcacgattgcacaaaatcgtgtcac 24968801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 3909890 - 3909785
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||||||||| ||| |||||||||| |||||||||||||||||||| || ||||| || | | || ||| ||||| |||||| ||||||| |||||||||    
T  3909890 tcgtgacacggttgatgcgtacgactcaaggtacgaccaaccttat-cttaaaacgtgccaaacatgccaaaaatagtgtcatgttttccaaaaatcgtg 3909792  T
Q  101 tcacgat 107  Q
    |||||||    
T  3909791 tcacgat 3909785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 52083031 - 52083115
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgtccagcaagccgaaaatcgtgtcacg 84  Q
    ||||| |||| ||| ||| |||||||||||||| |||||||||||||||||||| |||| ||| |||||| ||||||||||||||    
T  52083031 tcgtgtcacgattgatgcttacgacccaaggtatgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 52083115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 52094038 - 52094122
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgtccagcaagccgaaaatcgtgtcacg 84  Q
    ||||| |||| ||| ||| |||||||||||||| |||||||||||||||||||| |||| ||| |||||| ||||||||||||||    
T  52094038 tcgtgtcacgattgatgcttacgacccaaggtatgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 52094122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 84
Target Start/End: Original strand, 30000873 - 30000931
Alignment:
Q  27 caaggtacgaccaaccttatcctgaaaa-cttgtccagcaagccgaaaatcgtgtcacg 84  Q
    ||||||||||||||||||||||| |||| |||| |||||||||| ||||||||||||||    
T  30000873 caaggtacgaccaaccttatcctaaaaatcttgcccagcaagccaaaaatcgtgtcacg 30000931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 196
Target Start/End: Complemental strand, 3754668 - 3754603
Alignment:
Q  131 aaaatcgtgacacgcttgctaaaccgtgtcacgattctattcatccccaacttcacaaatttgaag 196  Q
    |||||||||||| ||||| |||| ||||||||||||||  |||| | |||||||||||||||||||    
T  3754668 aaaatcgtgacatgcttgttaaatcgtgtcacgattcttgtcattctcaacttcacaaatttgaag 3754603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 107
Target Start/End: Complemental strand, 38152113 - 38152020
Alignment:
Q  16 tgcgtacgacccaaggtacgaccaaccttatcctg-aaaacttgtccagcaag-ccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgat 107  Q
    ||||||||| ||||||||||||||||||||||| | ||||| | |||||||||   |||||| |||||||||||||||||| | ||| ||||||    
T  38152113 tgcgtacgatccaaggtacgaccaaccttatccggaaaaacgtatccagcaagtttgaaaattgtgtcacgttttcccaaatttgtgacacgat 38152020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 105
Target Start/End: Original strand, 10047801 - 10047876
Alignment:
Q  31 gtacgaccaaccttatcctgaaaacttgtccagcaagcc-gaaaatcgtgtcacgttttcccaaaatcgtgtcacg 105  Q
    ||||||||||||||||||||||||| |  ||| ||||   | ||||||||||||||||||||||||||||| ||||    
T  10047801 gtacgaccaaccttatcctgaaaacgtacccatcaagtttgcaaatcgtgtcacgttttcccaaaatcgtgacacg 10047876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 107
Target Start/End: Original strand, 13992731 - 13992768
Alignment:
Q  70 gaaaatcgtgtcacgttttcccaaaatcgtgtcacgat 107  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  13992731 gaaaatcgtgtcacgatttcccaaaatcgtgtcacgat 13992768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 48142817 - 48142763
Alignment:
Q  31 gtacgaccaaccttatcctgaaaa-cttgtccagcaagccgaaaatcgtgtcacg 84  Q
    |||||||||||||||||||||||| |||| ||| |||||| ||||| ||||||||    
T  48142817 gtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaattgtgtcacg 48142763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 31985325 - 31985240
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaa-ccttatcctgaaaacttgtccagcaag-ccgaaaatcgtgtcacg 84  Q
    ||||| |||| ||| |||||||| | |||||||||||||  |||||||||||||||||  ||||||||   |||||||||||||||    
T  31985325 tcgtgtcacgattgatgcgtacgtcacaaggtacgaccagtccttatcctgaaaacttaaccagcaagtttgaaaatcgtgtcacg 31985240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 48
Target Start/End: Complemental strand, 39774022 - 39773981
Alignment:
Q  7 cacgtttggtgcgtacgacccaaggtacgaccaaccttatcc 48  Q
    |||| ||| |||||| ||||||||||||||||||||||||||    
T  39774022 cacgattgatgcgtatgacccaaggtacgaccaaccttatcc 39773981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 103
Target Start/End: Original strand, 55085955 - 55086027
Alignment:
Q  31 gtacgaccaacctt-atcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtca 103  Q
    |||||||||||||| ||||||||| | || | |||| ||| ||||||||| ||||||||||| |||||||||||    
T  55085955 gtacgaccaacctttatcctgaaagcgtgccaagcatgcccaaaatcgtgccacgttttccc-aaatcgtgtca 55086027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 129; Significance: 7e-67; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 47674317 - 47674566
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  47674317 tcgtgacacgtttggtgcgtacaacccaaggtacgaccaaccttatcctgaaaacttgcccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 47674416  T
Q  101 tcacga----------tgcaaaa-catgctttcggcgttggaaaatcgtgacacgcttgctaaaccgtgtcacgattctattcatccccaacttcacaaa 189  Q
    ||||||          ||||||| ||||||  | ||  ||||||||||||||| |||||||||| ||||||||||||||  |||| | ||||||||||||    
T  47674417 tcacgattggacaccctgcaaaaccatgctcactgc-ctggaaaatcgtgacatgcttgctaaatcgtgtcacgattctcatcattctcaacttcacaaa 47674515  T
Q  190 tttgaaggcaaaaacaaca-ttctccaccttaacttcaaattgatgatgatg 240  Q
     ||||||||||| |||||| ||||||||||| ||||||||||||||||||||    
T  47674516 -ttgaaggcaaatacaacatttctccaccttgacttcaaattgatgatgatg 47674566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 47676510 - 47676616
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  47676510 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgcccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 47676609  T
Q  101 tcacgat 107  Q
    |||||||    
T  47676610 tcacgat 47676616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 27347716 - 27347612
Alignment:
Q  2 cgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgt 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||    
T  27347716 cgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgcccagcaagccgaaaatcatgtca-gttttcccaaaatcgtgt 27347618  T
Q  102 cacgat 107  Q
    ||||||    
T  27347617 cacgat 27347612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 6360504 - 6360607
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||    
T  6360504 tcgtgacacgtttggtgcgtacgacccaagatacgaccaacattatcctgaaaacttgcccaacaagccgaaaatcgtgtcacgtttccccaaaatcgtg 6360603  T
Q  101 tcac 104  Q
    ||||    
T  6360604 tcac 6360607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 4538925 - 4539031
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||   ||||| |||||||||||||||||||||||||||||||||    
T  4538925 tcgtgacacgtttggtgcgtacgatccaaggtacgaccaaccttgtcctgaaaacttgcttagcaaaccgaaaatcgtgtcacgttttcccaaaatcgtg 4539024  T
Q  101 tcacgat 107  Q
    |||||||    
T  4539025 tcacgat 4539031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 7 - 107
Target Start/End: Complemental strand, 43864049 - 43863949
Alignment:
Q  7 cacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacga 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  | | ||| |||||||||||||||||||||||||||||||||||||||    
T  43864049 cacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaactttcctaacaaaccgaaaatcgtgtcacgttttcccaaaatcgtgtcacga 43863950  T
Q  107 t 107  Q
    |    
T  43863949 t 43863949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 14070207 - 14070314
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctg-aaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgt 99  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| || |||||||| | |||||| |||||||||||||||||||||||||||||||    
T  14070207 tcgtgacacgtttggtgcatacgacccaaggtacgaccaaccttatcttgaaaaacttgcctagcaagtcgaaaatcgtgtcacgttttcccaaaatcgt 14070306  T
Q  100 gtcacgat 107  Q
    ||||||||    
T  14070307 gtcacgat 14070314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 14380235 - 14380342
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctg-aaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgt 99  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| || |||||||| | |||||| |||||||||||||||||||||||||||||||    
T  14380235 tcgtgacacgtttggtgcatacgacccaaggtacgaccaaccttatcttgaaaaacttgcctagcaagtcgaaaatcgtgtcacgttttcccaaaatcgt 14380334  T
Q  100 gtcacgat 107  Q
    ||||||||    
T  14380335 gtcacgat 14380342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 18126438 - 18126339
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||| ||||||||| |||||||||||    
T  18126438 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaacattatcctgaaaacttgcccaacaagccgaaaatcgtatcacgtttttccaaaatcgtg 18126339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 2647387 - 2647281
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||| || ||||||||  ||||||| |||||||||||||||||||||||    
T  2647387 tcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtgcccagcaagttgaaaatcatgtcacgttttcccaaaatcgtg 2647288  T
Q  101 tcacgat 107  Q
     ||||||    
T  2647287 acacgat 2647281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 23554834 - 23554727
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgt 99  Q
    ||||| |||| ||| |||||||||||||| |||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||    
T  23554834 tcgtgtcacgattgatgcgtacgacccaatgtacgaccaaccttatcctgaaaaacttgcccagcaagtcgaaaatcgtgtcacgttttcccaaaatcgt 23554735  T
Q  100 gtcacgat 107  Q
    ||||||||    
T  23554734 gtcacgat 23554727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 2389868 - 2389762
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |  ||||||||| |||||||||||||| ||||| ||||||||||    
T  2389868 tcgtgacacgtttggtgtgtacgatccaaggtacgaccaaccttatcctgaaaacgttcccagcaagctgaaaatcgtgtcacattttctcaaaatcgtg 2389769  T
Q  101 tcacgat 107  Q
    |||||||    
T  2389768 tcacgat 2389762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 4585955 - 4585751
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||  |||||||||  ||| |||||| |||||| ||||||||||||||||||| |||    
T  4585955 tcgtgacatgtttggtgcgtacgacccaaggtacgaccaaccttatattgaaaacttacccaacaagccaaaaatcttgtcacgttttcccaaaatagtg 4585856  T
Q  101 tcacga----------tgcaaaacatgctttcggcgttggaaaatcgtgacacgcttgctaaaccgtgtcacgattctattcatccccaacttcacaaat 190  Q
    ||||||          |||||||||||||  | ||  | |||||||||||||| |||||||||  ||||||| |||||  |||| | |||||||||||||    
T  4585855 tcacgattggacaccctgcaaaacatgctcactgc-ctagaaaatcgtgacacacttgctaaatagtgtcacaattcttatcattctcaacttcacaaat 4585757  T
Q  191 ttgaag 196  Q
    ||||||    
T  4585756 ttgaag 4585751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 2761676 - 2761759
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacg 84  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||    
T  2761676 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaatcttatcctgaaaacttgcccagcaagctgaaaatcgtgtcacg 2761759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 26417107 - 26417004
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||| |  ||||||||||||| ||| ||||||||||||    
T  26417107 tcgtgacacggttggtgcgtacgacccaaggtacgaccaaccttaccctgaaaacttgtccaacaaactaaaaatcgtgtcacatttccccaaaatcgtg 26417008  T
Q  101 tcac 104  Q
    ||||    
T  26417007 tcac 26417004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 32358431 - 32358534
Alignment:
Q  4 tgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtca 103  Q
    ||||||||||||||||||||| ||||||||||| |||| ||||||||||||| || ||||||||| |||||| ||||||||||||||||||||||| |||    
T  32358431 tgacacgtttggtgcgtacgatccaaggtacgatcaactttatcctgaaaacgtgcccagcaagctgaaaattgtgtcacgttttcccaaaatcgtatca 32358530  T
Q  104 cgat 107  Q
    ||||    
T  32358531 cgat 32358534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 33332140 - 33332041
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||||||  || ||||||||  ||||||||||||||||||| |||||||||||    
T  33332140 tcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcttgaaaatgtgcccagcaagttgaaaatcgtgtcacgtttttccaaaatcgtg 33332041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 2 - 84
Target Start/End: Complemental strand, 1113449 - 1113367
Alignment:
Q  2 cgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacg 84  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| || ||||||||||||||||||    
T  1113449 cgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaatttgcccatcaggccgaaaatcgtgtcacg 1113367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 19495765 - 19495657
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgtccagcaagcc-gaaaatcgtgtcacgttttcccaaaatcg 98  Q
    ||||| |||| ||| ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||  ||||||||| |||||||||||||||| |    
T  19495765 tcgtgtcacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaaatcgtggcacgttttcccaaaattg 19495666  T
Q  99 tgtcacgat 107  Q
    |||||||||    
T  19495665 tgtcacgat 19495657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 48489224 - 48489120
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||||||||| ||||||||||| |||||||||| |||||||||||||||| || | || |||||||||| |||| |||||||||||||||| ||||||||    
T  48489224 tcgtgacacgattggtgcgtacaacccaaggtatgaccaaccttatcctggaagcatgcccagcaagccaaaaaccgtgtcacgttttccctaaatcgtg 48489125  T
Q  101 tcacg 105  Q
    |||||    
T  48489124 tcacg 48489120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 7 - 107
Target Start/End: Complemental strand, 4178563 - 4178462
Alignment:
Q  7 cacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacg 105  Q
    |||| ||| ||||||||| ||||||||||||||||||||||||||||| |||| | | |||||| |||||||||||||| ||||||||||||||||||||    
T  4178563 cacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcctaacaagccaaaaatcgtgtcacgatttcccaaaatcgtgtcacg 4178464  T
Q  106 at 107  Q
    ||    
T  4178463 at 4178462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 11 - 107
Target Start/End: Complemental strand, 4796349 - 4796253
Alignment:
Q  11 tttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgat 107  Q
    |||||||||||||| ||||||||||||||||  |||||||||||| || ||| ||||  ||||||||||||||||||| ||||||||||||||||||    
T  4796349 tttggtgcgtacgatccaaggtacgaccaactctatcctgaaaacgtgcccatcaagttgaaaatcgtgtcacgtttttccaaaatcgtgtcacgat 4796253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 48491372 - 48491289
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacg 84  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||| ||||| | || ||| |||||||||||||||||||||    
T  48491372 tcgtgacacggttggtgcgtacgacccaaggtacgaccaacctaatcttgaaagcgtgcccaacaagccgaaaatcgtgtcacg 48491289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 21983649 - 21983746
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaag-ccgaaaatcgtgtcacgttttcccaaaatc 97  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||||||| |  ||| ||||   |||||||||||||||||||| |||||||    
T  21983649 tcgtgacacaattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtacccaacaagtttgaaaatcgtgtcacgttttcacaaaatc 21983746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 107
Target Start/End: Original strand, 30026391 - 30026479
Alignment:
Q  18 cgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgat 107  Q
    |||||||| ||||||||||||||||||||||||||| | || || |||||| |||||||||||||||||| ||||||||| |||||||||    
T  30026391 cgtacgactcaaggtacgaccaaccttatcctgaaa-cgtgcccggcaagctgaaaatcgtgtcacgtttccccaaaatcatgtcacgat 30026479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 6570387 - 6570284
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||||||||| ||| |||||| |||||||||||||| |||||||||||| ||||| |||| |||| ||| |||||||||||||| || || ||||| |||    
T  6570387 tcgtgacacggttgatgcgtatgacccaaggtacgatcaaccttatcctaaaaacgtgtcaagcatgccaaaaatcgtgtcacgattgcctaaaattgtg 6570288  T
Q  101 tcac 104  Q
    ||||    
T  6570287 tcac 6570284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 31733354 - 31733420
Alignment:
Q  31 gtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatc 97  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| || ||||||    
T  31733354 gtacgaccaaccttatcctgaaaacttgcccagcaagccgaaaattgtgtcacgtttccctaaaatc 31733420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 107
Target Start/End: Original strand, 49092108 - 49092205
Alignment:
Q  12 ttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgtccagcaagc-cgaaaatcgtgtcacgttttcccaaaatcgtgtcacgat 107  Q
    ||||||| ||||| ||||||||||||||||||||||||||||| | |  ||||||||  ||||||||||||||| |||||||||||||||| ||||||    
T  49092108 ttggtgcatacgatccaaggtacgaccaaccttatcctgaaaaacgtacccagcaagttcgaaaatcgtgtcacattttcccaaaatcgtgacacgat 49092205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 107
Target Start/End: Original strand, 2479757 - 2479849
Alignment:
Q  16 tgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaag-ccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgat 107  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||| ||||   ||||||||||| ||| |||| |||||||||| ||||||    
T  2479757 tgcgtacgacccaaggtacgaccaaccttatcctgaaaacttaaccaacaagtttgaaaatcgtgtaacgatttcacaaaatcgtgacacgat 2479849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 24515134 - 24515218
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgtccagcaagccgaaaatcgtgtcacg 84  Q
    ||||| |||| ||| ||||||||| ||||||||||||||||||||||||||||| |||| |||||||||| ||||| ||||||||    
T  24515134 tcgtgccacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaattgtgtcacg 24515218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 35853707 - 35853626
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctg-aaaacttgtccagcaagccgaaaatcgtgtc 81  Q
    ||||| |||| ||| ||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||| |||||||||||    
T  35853707 tcgtgccacgattgatgcgtacgatccaaggtacgaccgaccttatcctgaaaaacttgcccagcaagccaaaaatcgtgtc 35853626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 32 - 107
Target Start/End: Original strand, 2361562 - 2361638
Alignment:
Q  32 tacgaccaaccttatcctgaaaacttgtccagcaagccgaaaa-tcgtgtcacgttttcccaaaatcgtgtcacgat 107  Q
    |||||||||||||||||| |||| |||||||||||  |||||| | ||||||||||| |||||||||||||||||||    
T  2361562 tacgaccaaccttatcctaaaaatttgtccagcaaatcgaaaaattgtgtcacgtttccccaaaatcgtgtcacgat 2361638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 46515998 - 46515915
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacg 84  Q
    |||||||| | ||||||| |||||||||||||  ||||||||||||||||||||| || ||| |||||| ||||||||| ||||    
T  46515998 tcgtgacatgcttggtgcatacgacccaaggtgtgaccaaccttatcctgaaaacgtgcccaacaagccaaaaatcgtgacacg 46515915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 107
Target Start/End: Original strand, 47264066 - 47264156
Alignment:
Q  18 cgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaag-ccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgat 107  Q
    ||||||||||||| ||||||||||||||||||||||||||  ||||||||   ||||||||||||||| |||| || ||| ||| ||||||    
T  47264066 cgtacgacccaagatacgaccaaccttatcctgaaaacttaaccagcaagtttgaaaatcgtgtcacgatttcacacaattgtgccacgat 47264156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 496368 - 496461
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaa 94  Q
    |||||||||| ||| |||||||||| |||||||   ||||||||||||||||||  |||| |||| ||| |||| |||| ||||||||||||||    
T  496368 tcgtgacacggttgatgcgtacgactcaaggtaaatccaaccttatcctgaaaatgtgtcaagcatgccaaaaaccgtgacacgttttcccaaa 496461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 31 - 107
Target Start/End: Complemental strand, 29608299 - 29608222
Alignment:
Q  31 gtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttccc-aaaatcgtgtcacgat 107  Q
    |||||||||||||||||||||||||||| ||| |||| ||||||| || |||| ||| ||| ||||||||||||||||    
T  29608299 gtacgaccaaccttatcctgaaaacttgcccaacaagtcgaaaattgtatcacttttccccaaaaatcgtgtcacgat 29608222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 21989317 - 21989420
Alignment:
Q  4 tgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaag-ccgaaaatcgtgtcacgttttcccaaaatcgtgtc 102  Q
    ||||||| ||| |||||| |||||||||||||| |||||||||||||||||| |  ||| ||||   ||||||||||||||| |||| |||||||||| |    
T  21989317 tgacacgattgctgcgtatgacccaaggtacgatcaaccttatcctgaaaacgtacccatcaagttggaaaatcgtgtcacg-tttcacaaaatcgtgcc 21989415  T
Q  103 acgat 107  Q
    |||||    
T  21989416 acgat 21989420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 44847816 - 44847760
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaactt 57  Q
    ||||| |||| ||| | ||||||||||||||||||||||||||||||||||||||||    
T  44847816 tcgtgccacgattgatacgtacgacccaaggtacgaccaaccttatcctgaaaactt 44847760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 240
Target Start/End: Complemental strand, 48491196 - 48491146
Alignment:
Q  190 tttgaaggcaaaaacaacattctccaccttaacttcaaattgatgatgatg 240  Q
    |||||||||| | ||||||||||||||||| ||||||||||||||||||||    
T  48491196 tttgaaggcatacacaacattctccaccttgacttcaaattgatgatgatg 48491146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 63 - 107
Target Start/End: Original strand, 48599932 - 48599976
Alignment:
Q  63 gcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgat 107  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||    
T  48599932 gcaagccgaaaatcgtgtcacgtttccccataatcgtgtcacgat 48599976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 130 - 208
Target Start/End: Original strand, 47676649 - 47676726
Alignment:
Q  130 gaaaatcgtgacacgcttgctaaaccgtgtcacgattctattcatccccaacttcacaaatttgaaggcaaaaacaaca 208  Q
    |||||||||||||||||||||||| | ||||| ||||||  |||| | |||||||| ||| ||||||||||| ||||||    
T  47676649 gaaaatcgtgacacgcttgctaaatcatgtcatgattctcatcattctcaacttcataaa-ttgaaggcaaatacaaca 47676726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 107
Target Start/End: Original strand, 79807 - 79904
Alignment:
Q  12 ttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgtccagcaagcc-gaaaatcgtgtcacgttttcccaaaatcgtgtcacgat 107  Q
    ||||||| || ||||||| |||||||||||||||||||||||| | |  ||||||||   ||||||| |||||| |||| ||||||||||| ||||||    
T  79807 ttggtgcatatgacccaatgtacgaccaaccttatcctgaaaaacgtacccagcaagtttgaaaatcttgtcacatttttccaaaatcgtgacacgat 79904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 107
Target Start/End: Original strand, 25767398 - 25767435
Alignment:
Q  70 gaaaatcgtgtcacgttttcccaaaatcgtgtcacgat 107  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  25767398 gaaaatcgtgtcacgatttcccaaaatcgtgtcacgat 25767435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 1113356 - 1113296
Alignment:
Q  106 atgcaaaacatgctttcggcgttggaaaatcgtgacacgcttgctaaaccgtgtcacgatt 166  Q
    |||||||| ||||| | ||| |||  |||||||||||||||||||||| ||||||||||||    
T  1113356 atgcaaaatatgctattggcattgcgaaatcgtgacacgcttgctaaatcgtgtcacgatt 1113296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 242
Target Start/End: Complemental strand, 9189520 - 9189464
Alignment:
Q  187 aaatttgaaggcaaaaacaacatt-ctccaccttaacttcaaattgatgatgatgtc 242  Q
    |||||||||| |||  |||||||| ||||||||| ||||| ||||||||||||||||    
T  9189520 aaatttgaagtcaattacaacatttctccaccttgacttctaattgatgatgatgtc 9189464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 119; Significance: 7e-61; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 29812857 - 29812606
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||    
T  29812857 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgcccagcaagacaaaaatcgtgtcacgttttcccaaaatcgtg 29812758  T
Q  101 tcacga----------tgcaaaa-catgctttcggcgttggaaaatcgtgacacgcttgctaaaccgtgtcacgattctattcatccccaacttcacaaa 189  Q
    ||||||          ||||||| ||||||  | ||  | |||||||||||||| ||||||||| ||||||||||||||  |||| |  |||||||||||    
T  29812757 tcacgattggacaccctgcaaaaccatgctcactgc-ctagaaaatcgtgacacacttgctaaatcgtgtcacgattctcatcattcttaacttcacaaa 29812659  T
Q  190 tttgaaggcaaaaacaaca-ttctccaccttaacttcaaattgatgatgatgtc 242  Q
     ||||||||||| |||||| ||||||||||| ||||||||||||||||||||||    
T  29812658 -ttgaaggcaaatacaacatttctccaccttgacttcaaattgatgatgatgtc 29812606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 4569526 - 4569421
Alignment:
Q  2 cgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgt 101  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||    
T  4569526 cgtgacacggttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgcccagcaagccgaaaatcgtgtcacgttttcccaaaatcatgt 4569427  T
Q  102 cacgat 107  Q
    ||||||    
T  4569426 cacgat 4569421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 5236831 - 5236937
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||    
T  5236831 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaacttatcctgaaaactttcccagcaagccgaaaatcgtgtcacgttttcccaaaattgtg 5236930  T
Q  101 tcacgat 107  Q
    |||||||    
T  5236931 tcacgat 5236937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 43404325 - 43404431
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||    
T  43404325 tcgtgacacgtttggtgcgtacgacccaaggtacgaccgaccttatcctgaaaacttgctcagcaagccgaaaatcgtgtcacgtttccccaaaatcgtg 43404424  T
Q  101 tcacgat 107  Q
    |||||||    
T  43404425 tcacgat 43404431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 55302557 - 55302662
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||    
T  55302557 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgcccagcaagccgaaaatcgtatcacgttttccc-aaatcgtg 55302655  T
Q  101 tcacgat 107  Q
    |||||||    
T  55302656 tcacgat 55302662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 49200043 - 49200218
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||| ||||||    
T  49200043 tcgtgacacatttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacatgcccagcaagccgaaaatcgtgtcacgtttccccaacatcgtg 49200142  T
Q  101 tcacga----------tgcaaaacatgctttcggcgttggaaaatcgtgacacgcttgctaaaccgtgtcacgatt 166  Q
    ||||||          |||||||||||||  |||| ||| ||||||||||||||| ||  ||| ||||||||||||    
T  49200143 tcacgattggacaccctgcaaaacatgctcacggcattgcaaaatcgtgacacgcctgtaaaatcgtgtcacgatt 49200218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 6096192 - 6096295
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||    
T  6096192 tcgtgacacatttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaatttgtccaataagccgaaaatcgtgtcacgttttcccaaaatcgtg 6096291  T
Q  101 tcac 104  Q
    ||||    
T  6096292 tcac 6096295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 34490808 - 34490702
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||  |||||||||||||||||||||||| |||||||||||    
T  34490808 tcgtgacacgtttggtgcgtacgacccaaggtacaaccaaccttatcctgaaaacttgcccaataagccgaaaatcgtgtcacgtttttccaaaatcgtg 34490709  T
Q  101 tcacgat 107  Q
    |||||||    
T  34490708 tcacgat 34490702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 43402382 - 43402488
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||    
T  43402382 tcgtgacacgtttggtgcgtacgacccaagatacaaccaaccttatcctgaaaacttgcccagcaagccgaaaatcgtgtcacgtttctccaaaatcgtg 43402481  T
Q  101 tcacgat 107  Q
    |||||||    
T  43402482 tcacgat 43402488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 4 - 242
Target Start/End: Complemental strand, 44331360 - 44331113
Alignment:
Q  4 tgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtca 103  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||| ||||||||||||| |||||||||||||||||||    
T  44331360 tgacaagtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtacccagcaagccaaaaatcgtgtcactttttcccaaaatcgtgtca 44331261  T
Q  104 cgat----------gcaaaacatgctttcggcgttggaaaatcgtgacacgcttgctaaaccgtgtcacgattctattca---tccccaacttcacaaat 190  Q
    ||||          ||||||||| ||  |  | |||  ||||||||||||| |||| ||| |||||||||||||  ||||   || ||||   | ||| |    
T  44331260 cgattgaacacccagcaaaacatactcacaacattgcgaaatcgtgacacggttgccaaagcgtgtcacgattc--ttcactttctccaa--actcaatt 44331165  T
Q  191 ttgaaggcaaaaacaacattctccaccttaacttcaaattgatgatgatgtc 242  Q
    | ||||||| ||||| ||||||||||||| ||||||||||||||||||||||    
T  44331164 tagaaggcataaacagcattctccaccttgacttcaaattgatgatgatgtc 44331113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 31340634 - 31340741
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacg-ttttcccaaaatcgt 99  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| | ||||||||||||| |    
T  31340634 tcgtgtcacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgcccaacaagccgaaaatcgtgtcatgtttttcccaaaatcat 31340733  T
Q  100 gtcacgat 107  Q
    ||||||||    
T  31340734 gtcacgat 31340741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 29810662 - 29810556
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||  ||||||| | |||||||||    
T  29810662 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaatttgtccagcaagccaaaaattgtgctacgtttttctaaaatcgtg 29810563  T
Q  101 tcacgat 107  Q
    |||||||    
T  29810562 tcacgat 29810556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 40592461 - 40592355
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||||||||| |||||| |||||| |||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||    
T  40592461 tcgtgacacgattggtgtgtacgatccaaggtacgaccaaccttatcctgaaaacgtgtccagcaagttgaaaatcgtgtcacgttttcccaaaatcgtg 40592362  T
Q  101 tcacgat 107  Q
     ||||||    
T  40592361 acacgat 40592355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 54593280 - 54593174
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||||  ||||||||||||||||||||||||||| | |    
T  54593280 tcgtgacacgtttggtgcgtacgacccaatgtacgaccaaccttatcctgaaaacgtgcccagcaagttgaaaatcgtgtcacgttttcccaaaattgag 54593181  T
Q  101 tcacgat 107  Q
    |||||||    
T  54593180 tcacgat 54593174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 40912913 - 40912807
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||||||||||||||||||||||| ||||| |||||||| |||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||| ||     
T  40912913 tcgtgacacgtttggtgcgtacgatccaagatacgaccagccttatccagaaaacttgcccaacaagccgaaaatcgtgtcacgttttcccaaaattgta 40912814  T
Q  101 tcacgat 107  Q
    |||||||    
T  40912813 tcacgat 40912807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 46173309 - 46173204
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||  |||||||||| |||||||||||||||||    
T  46173309 tcgtgacacggttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtgcccaacaagccg-gaatcgtgtcatgttttcccaaaatcgtg 46173211  T
Q  101 tcacgat 107  Q
    |||||||    
T  46173210 tcacgat 46173204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 7762058 - 7761952
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgt 99  Q
    ||||| |||| ||| ||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||||||||||| ||||||||||||||    
T  7762058 tcgtgtcacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacg-tttcccaaaatcgt 7761960  T
Q  100 gtcacgat 107  Q
    ||||||||    
T  7761959 gtcacgat 7761952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 7 - 107
Target Start/End: Complemental strand, 7764240 - 7764139
Alignment:
Q  7 cacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacg 105  Q
    |||| ||| |||||||||||||||||||||||||||||||||| |||| |||| ||| |||||| |||||||||||||||||||||||||||||||||||    
T  7764240 cacgattgatgcgtacgacccaaggtacgaccaaccttatcctaaaaatcttgcccaacaagccaaaaatcgtgtcacgttttcccaaaatcgtgtcacg 7764141  T
Q  106 at 107  Q
    ||    
T  7764140 at 7764139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 36029501 - 36029607
Alignment:
Q  2 cgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaag-ccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| |  ||||||||   ||||||||||||||||||| |||||||||||    
T  36029501 cgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtacccagcaagtttgaaaatcgtgtcacgtttttccaaaatcgtg 36029600  T
Q  101 tcacgat 107  Q
     ||||||    
T  36029601 acacgat 36029607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 107
Target Start/End: Original strand, 5258533 - 5258625
Alignment:
Q  16 tgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgat 107  Q
    |||||||||  |||||||||||||||||||||||||||| |||| |||||||||| |||||||||||||| ||||||||||||||||||||||    
T  5258533 tgcgtacgattcaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacgatttcccaaaatcgtgtcacgat 5258625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 9636502 - 9636609
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgt 99  Q
    ||||| |||| ||| ||||||||| ||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||| | |||||||||||| |    
T  9636502 tcgtgccacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgtccatcaagccaaaaatcgtgtcatgatttcccaaaatcat 9636601  T
Q  100 gtcacgat 107  Q
    ||||||||    
T  9636602 gtcacgat 9636609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 44331821 - 44331927
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    ||||||||| ||||||| ||||||||||||||||||| ||| ||||| ||||||| |  |||| ||||| |||||||||||||||||| |||||||||||    
T  44331821 tcgtgacacatttggtgtgtacgacccaaggtacgactaactttatcttgaaaacgtacccaggaagccaaaaatcgtgtcacgtttttccaaaatcgtg 44331920  T
Q  101 tcacgat 107  Q
    |||||||    
T  44331921 tcacgat 44331927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 40845060 - 40845157
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcct-gaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatc 97  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||||  ||||| ||||||||| |  ||||||||||||||||||||||||||||    
T  40845060 tcgtgacacgattggtgcgtacaacccaaggtacgaccaaccttatcctaaaaaacgtgtccagcacgttgaaaatcgtgtcacgttttcccaaaatc 40845157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 31 - 107
Target Start/End: Complemental strand, 36018408 - 36018332
Alignment:
Q  31 gtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgat 107  Q
    ||||||||||||||||||| ||||| || |||||||||||||||| |||||||||||||||||||||||||||||||    
T  36018408 gtacgaccaaccttatcctaaaaacgtgcccagcaagccgaaaattgtgtcacgttttcccaaaatcgtgtcacgat 36018332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 1735983 - 1735884
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||| ||||  ||||   ||||  |||||||||||||||||||||||||||||||    
T  1735983 tcgtgacacgattggtgcgtacaacccaaggtacgaccaaccttatcctaaaaatgtgtcattcaagttgaaaatcgtgtcacgttttcccaaaatcgtg 1735884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 8370169 - 8370062
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaa-gccgaaaatcgtgtcacgttttcccaaaatcgt 99  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||| ||||| |  |||||||    ||||||||||||||||||||||||||||||    
T  8370169 tcgtgacacgattggtgcgtacaacccaaggtacgaccaaccttatcctaaaaacgttcccagcaattttgaaaatcgtgtcacgttttcccaaaatcgt 8370070  T
Q  100 gtcacgat 107  Q
    | ||||||    
T  8370069 gacacgat 8370062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 16264755 - 16264862
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaag-ccgaaaatcgtgtcacgttttcccaaaatcgt 99  Q
    ||||| |||| ||||||||||| |||||||||||||||||||||||||||||||| |  ||||| ||   ||||||||||||||||||||||||||||||    
T  16264755 tcgtggcacgattggtgcgtaccacccaaggtacgaccaaccttatcctgaaaacgtacccagctagtttgaaaatcgtgtcacgttttcccaaaatcgt 16264854  T
Q  100 gtcacgat 107  Q
    | ||||||    
T  16264855 gacacgat 16264862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 21711608 - 21711715
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaag-ccgaaaatcgtgtcacgttttcccaaaatcgt 99  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| |||||| |   |||||||   |||||| |||||||||||||||||||||||    
T  21711608 tcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatccggaaaacgtactcagcaagtttgaaaattgtgtcacgttttcccaaaatcgt 21711707  T
Q  100 gtcacgat 107  Q
    | ||||||    
T  21711708 gacacgat 21711715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 27027113 - 27027220
Alignment:
Q  2 cgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaact-tgtccagcaag-ccgaaaatcgtgtcacgttttcccaaaatcgt 99  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||| | |  ||||||||   ||||||||||||||||||||||||||||||    
T  27027113 cgtggcacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaaatgtagccagcaagtttgaaaatcgtgtcacgttttcccaaaatcgt 27027212  T
Q  100 gtcacgat 107  Q
    | ||||||    
T  27027213 gacacgat 27027220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 39032235 - 39032128
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaag-ccgaaaatcgtgtcacgttttcccaaaatcgt 99  Q
    ||||| |||| |||||||||||||||||||||||||||||| ||||||||||||| |  ||||||||   |||||||||||||| |||||||||||||||    
T  39032235 tcgtggcacgattggtgcgtacgacccaaggtacgaccaactttatcctgaaaacgtacccagcaagtttgaaaatcgtgtcacattttcccaaaatcgt 39032136  T
Q  100 gtcacgat 107  Q
    | ||||||    
T  39032135 gacacgat 39032128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 107
Target Start/End: Complemental strand, 40735218 - 40735115
Alignment:
Q  6 acacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaact-tgtccagcaag-ccgaaaatcgtgtcacgttttcccaaaatcgtgtca 103  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| | |  ||||||||   ||||||||||||||||||||||||||||||| ||    
T  40735218 acacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaaatgtagccagcaagtttgaaaatcgtgtcacgttttcccaaaatcgtgaca 40735119  T
Q  104 cgat 107  Q
    ||||    
T  40735118 cgat 40735115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 45094958 - 45094851
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgt 99  Q
    ||||| |||| ||| ||||||||  ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||||||| ||||||||||| ||    
T  45094958 tcgtgtcacgattgatgcgtacgttccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgatttcccaaaattgt 45094859  T
Q  100 gtcacgat 107  Q
    ||||||||    
T  45094858 gtcacgat 45094851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 8127037 - 8127143
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||||||||| |||||| |||||||||||| |||||||||||||||||||||||| |  | ||||||  ||||||||||||||  |||||||||||||||    
T  8127037 tcgtgacacggttggtgtgtacgacccaagatacgaccaaccttatcctgaaaacgtacctagcaagttgaaaatcgtgtcacactttcccaaaatcgtg 8127136  T
Q  101 tcacgat 107  Q
     ||||||    
T  8127137 acacgat 8127143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 24694845 - 24694779
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaag 67  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  24694845 tcgtgacacgattggtgcgtacaacccaaggtacgaccaaccttatcctgaaaacgtgtccagcaag 24694779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 7 - 100
Target Start/End: Original strand, 27038454 - 27038548
Alignment:
Q  7 cacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaag-ccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| |  ||| ||||   |||||||||||||| ||||||||||||||||    
T  27038454 cacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacatacccaacaagtttgaaaatcgtgtcacattttcccaaaatcgtg 27038548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 107
Target Start/End: Complemental strand, 3393382 - 3393294
Alignment:
Q  19 gtacgacccaaggtacgaccaaccttatcctgaaaa-cttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgat 107  Q
    |||||| || ||||||||||||| |||||||||||| |||| |||||||||| |||||||||||||| ||||||||||||||||||||||    
T  3393382 gtacgatcctaggtacgaccaac-ttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacgatttcccaaaatcgtgtcacgat 3393294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 48438622 - 48438727
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaag-ccgaaaatcgtgtcacgttttcccaaaatcgt 99  Q
    |||||||||| ||||||||||||| ||||||||| |||||||||||||||||||| |  ||| ||||   |||||||||||||||||| |||||||||||    
T  48438622 tcgtgacacgattggtgcgtacgatccaaggtacaaccaaccttatcctgaaaacgtacccatcaagtttgaaaatcgtgtcacgtttccccaaaatcgt 48438721  T
Q  100 gtcacg 105  Q
    | ||||    
T  48438722 gacacg 48438727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 40734292 - 40734184
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaact-tgtccagcaag-ccgaaaatcgtgtcacgttttcccaaaatcg 98  Q
    |||||||||| ||| ||||||||| ||||||||||||||||||||||||||||| | |  ||| ||||   |||||||||||||||||||||||||||||    
T  40734292 tcgtgacacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaaatgtagccaacaagtttgaaaatcgtgtcacgttttcccaaaatcg 40734193  T
Q  99 tgtcacgat 107  Q
    || ||||||    
T  40734192 tgacacgat 40734184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 33386355 - 33386248
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaag-ccgaaaatcgtgtcacgttttcccaaaatcgt 99  Q
    ||||| |||| ||| | ||||||||||||| ||||||||||||||||||||||||||  ||||||||   ||||||||||||||| || | |||||||||    
T  33386355 tcgtgtcacgattgatacgtacgacccaagatacgaccaaccttatcctgaaaacttaaccagcaagtttgaaaatcgtgtcacgattccacaaaatcgt 33386256  T
Q  100 gtcacgat 107  Q
    ||||||||    
T  33386255 gtcacgat 33386248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 31 - 104
Target Start/End: Complemental strand, 51398590 - 51398517
Alignment:
Q  31 gtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcac 104  Q
    |||||||||||| |||||| |||||||| ||| ||| |||||||| ||||||||||||||||||||||||||||    
T  51398590 gtacgaccaaccatatcctaaaaacttgcccaacaaaccgaaaattgtgtcacgttttcccaaaatcgtgtcac 51398517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 30709476 - 30709368
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgtccagcaagcc-gaaaatcgtgtcacgttttcccaaaatcg 98  Q
    |||||||||| |||||||||||||||||||||| |||||| ||||||||||||| | |  ||||||||   |||||| ||||||||||||| ||||||||    
T  30709476 tcgtgacacgattggtgcgtacgacccaaggtaagaccaatcttatcctgaaaaacgtacccagcaagtttgaaaattgtgtcacgttttctcaaaatcg 30709377  T
Q  99 tgtcacgat 107  Q
    || ||||||    
T  30709376 tgacacgat 30709368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 47923583 - 47923487
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgtccagcaagcc-gaaaatcgtgtcacgttttcccaaaa 95  Q
    |||||||||| ||| ||||||| ||||||||||||||||||||||||||||||| | |  ||||||||   ||||||||||||||||||||||||||    
T  47923583 tcgtgacacgattgatgcgtacaacccaaggtacgaccaaccttatcctgaaaaacgtacccagcaagtttgaaaatcgtgtcacgttttcccaaaa 47923487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 27986156 - 27986049
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaag-ccgaaaatcgtgtcacgttttcccaaaatcgt 99  Q
    ||||| |||| ||| | ||||||||||||| ||||||||||||||||||||||||||  ||||||||   ||||||||||||||| || | || ||||||    
T  27986156 tcgtgtcacgattgatacgtacgacccaagatacgaccaaccttatcctgaaaacttaaccagcaagtttgaaaatcgtgtcacgattccacacaatcgt 27986057  T
Q  100 gtcacgat 107  Q
    ||||||||    
T  27986056 gtcacgat 27986049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 37726081 - 37726188
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaag-ccgaaaatcgtgtcacgttttcccaaaatcgt 99  Q
    ||||| |||| ||| | |||||||||||| |||||||||||||||||||||||||||  ||| ||||   ||||||||||||||| || | |||||||||    
T  37726081 tcgtgtcacgattgatacgtacgacccaatgtacgaccaaccttatcctgaaaacttaaccaacaagtttgaaaatcgtgtcacgattccacaaaatcgt 37726180  T
Q  100 gtcacgat 107  Q
    ||||||||    
T  37726181 gtcacgat 37726188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 107
Target Start/End: Complemental strand, 16498840 - 16498754
Alignment:
Q  18 cgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgat 107  Q
    ||||||||||| |||||||||||||||||   |  ||| |||| |||||||||||||||||| ||| ||||||||||||||| |||||||    
T  16498840 cgtacgacccacggtacgaccaaccttat---gtcaacgtgtcaagcaagccgaaaatcgtgacacattttcccaaaatcgtatcacgat 16498754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 5260712 - 5260781
Alignment:
Q  16 tgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgtccagcaagccgaaaatcgtgtcacg 84  Q
    ||||||||| |||| |||||||||||||||||||||||| |||| ||| |||||| ||||||||||||||    
T  5260712 tgcgtacgatccaaagtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 5260781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 37408253 - 37408197
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaactt 57  Q
    ||||| |||| ||| | ||||||||||||||||||||||||||||||||||||||||    
T  37408253 tcgtgccacgattgatacgtacgacccaaggtacgaccaaccttatcctgaaaactt 37408197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 184 - 240
Target Start/End: Complemental strand, 40735030 - 40734974
Alignment:
Q  184 cacaaatttgaaggcaaaaacaacattctccaccttaacttcaaattgatgatgatg 240  Q
    ||||||||||||| || | ||||||||||||||||| ||||||||||||||||||||    
T  40735030 cacaaatttgaagacatacacaacattctccaccttgacttcaaattgatgatgatg 40734974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 27453363 - 27453470
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaag-ccgaaaatcgtgtcacgttttcccaaaatcgt 99  Q
    ||||| |||| ||| | |||||| | |||||||||||||||||||||||||||||||  ||||||||   ||||||||||||||| || | || |||| |    
T  27453363 tcgtgtcacgattgatacgtacgtcacaaggtacgaccaaccttatcctgaaaacttaaccagcaagtttgaaaatcgtgtcacgattccacacaatcat 27453462  T
Q  100 gtcacgat 107  Q
    ||||||||    
T  27453463 gtcacgat 27453470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 188 - 242
Target Start/End: Original strand, 5258696 - 5258750
Alignment:
Q  188 aatttgaaggcaaaaacaacattctccaccttaacttcaaattgatgatgatgtc 242  Q
    ||||||||| || | ||||||||||||||||| ||||||||||||||||||||||    
T  5258696 aatttgaagacatacacaacattctccaccttgacttcaaattgatgatgatgtc 5258750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 23410704 - 23410810
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||||||||| |||||| | || ||||||||||||||||| |||||| ||||||| | || |||||    ||||| ||| |||||||| ||||||| |||    
T  23410704 tcgtgacacggttggtgtgaacaacccaaggtacgaccaaacttatcttgaaaacgtatcaagcaacataaaaattgtgacacgtttttccaaaattgtg 23410803  T
Q  101 tcacgat 107  Q
    |||||||    
T  23410804 tcacgat 23410810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 35925898 - 35926004
Alignment:
Q  2 cgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaag-ccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||| |||| |||||||||||  | ||| ||||||||||||||||||||||||| |  ||| ||||   |||||||||||||||||||| |||| |||||    
T  35925898 cgtggcacgattggtgcgtacatctcaatgtacgaccaaccttatcctgaaaacgtacccaacaagtttgaaaatcgtgtcacgttttctcaaactcgtg 35925997  T
Q  101 tcacgat 107  Q
     ||||||    
T  35925998 acacgat 35926004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 53921879 - 53921919
Alignment:
Q  20 tacgacccaaggtacgaccaaccttatcctgaaaacttgtc 60  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  53921879 tacgactcaaggtacgaccaaccttatcctgaaaacttgtc 53921919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 135 - 240
Target Start/End: Complemental strand, 7764102 - 7763998
Alignment:
Q  135 tcgtgacacgcttgctaaaccgtgtcacgatt-ctattcatccccaacttcacaaatttgaaggcaaaaacaacattctccaccttaacttcaaattgat 233  Q
    ||||||||||||||| ||| |||||||||||| || | | |||| |||||  ||| ||||||| || | |||||||| |||||||| |||||||||||||    
T  7764102 tcgtgacacgcttgccaaatcgtgtcacgatttctctgcttccc-aactttgcaa-tttgaagacatacacaacattttccaccttgacttcaaattgat 7764005  T
Q  234 gatgatg 240  Q
    |||||||    
T  7764004 gatgatg 7763998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 188 - 242
Target Start/End: Original strand, 9634871 - 9634925
Alignment:
Q  188 aatttgaaggcaaaaacaacattctccaccttaacttcaaattgatgatgatgtc 242  Q
    ||||||||| || | ||||||||||||||||| |||||||| |||||||||||||    
T  9634871 aatttgaagacatacacaacattctccaccttgacttcaaactgatgatgatgtc 9634925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 25929075 - 25929023
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaa 53  Q
    |||| ||||| ||||| ||||||| |||| |||||||||||||||||||||||    
T  25929075 tcgtaacacggttggtacgtacgatccaatgtacgaccaaccttatcctgaaa 25929023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 189
Target Start/End: Complemental strand, 29810523 - 29810464
Alignment:
Q  130 gaaaatcgtgacacgcttgctaaaccgtgtcacgattctattcatccccaacttcacaaa 189  Q
    |||||| ||||||||||||||||| | ||||||||||||  |||| | ||||||||||||    
T  29810523 gaaaattgtgacacgcttgctaaatcatgtcacgattctcatcattctcaacttcacaaa 29810464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 27974615 - 27974566
Alignment:
Q  18 cgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaag 67  Q
    ||||||||||||||||| |||||||||||| |||||| ||  ||||||||    
T  27974615 cgtacgacccaaggtacaaccaaccttatcatgaaaatttaaccagcaag 27974566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 99; Significance: 6e-49; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 80875 - 80981
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  80875 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgcccagcaagccgaaaatcgtgccacgttttcccaaaatcgtg 80974  T
Q  101 tcacgat 107  Q
    |||||||    
T  80975 tcacgat 80981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 99; Significance: 6e-49; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 15212580 - 15212474
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  15212580 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgctcagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 15212481  T
Q  101 tcacgat 107  Q
    |||||||    
T  15212480 tcacgat 15212474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 30143136 - 30143030
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  30143136 tcgtgacacggttggtgcgtacgacccaaagtacgaccaaccttatccttaaaacttgtccagcaagccgaaaatcgtgtcacattttcccaaaatcgtg 30143037  T
Q  101 tcacgat 107  Q
    |||||||    
T  30143036 tcacgat 30143030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 42435583 - 42435689
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||| ||||||||||||    
T  42435583 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgccaagcaagacgaaaatcgtgtcacgtttccccaaaatcgtg 42435682  T
Q  101 tcacgat 107  Q
    |||||||    
T  42435683 tcacgat 42435689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 22976110 - 22976004
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  22976110 tcgtgacacgtttggtgcgtgcgacccaatgtacgacaaaccttatcctgaaaacttgtcaagcaagctgaaaatcgtgtcacgttttcccaaaatcgtg 22976011  T
Q  101 tcacgat 107  Q
    |||||||    
T  22976010 tcacgat 22976004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 27811092 - 27810986
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||    
T  27811092 tcgtgacacgtttggtgcgtacaacccaagatacgaccaaccttatcctgaaaacttgcccagcaagccgaaaatcgtgtcacattttctcaaaatcgtg 27810993  T
Q  101 tcacgat 107  Q
    |||||||    
T  27810992 tcacgat 27810986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 40221340 - 40221234
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||| ||||| |||||||||||||||||||||||||||||||    
T  40221340 tcgtgacacgtttggtgcgtacgacccaaggcacgacaaaccttatcctgaaaacgtgtccaacaagctgaaaatcgtgtcacgttttcccaaaatcgtg 40221241  T
Q  101 tcacgat 107  Q
     ||||||    
T  40221240 acacgat 40221234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 43036217 - 43036111
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||| |||| |||||||||||||||||||| |||||||||||    
T  43036217 tcgtgacacgtttggtgcgtacgatccaaggtacgatcaaccttatcctgaaaacttgcccaacaagtcgaaaatcgtgtcacgtttttccaaaatcgtg 43036118  T
Q  101 tcacgat 107  Q
    |||||||    
T  43036117 tcacgat 43036111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 12703013 - 12703119
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||   ||||||| |||||||||||||||||||||||||||||||    
T  12703013 tcgtgacacgtatggtgcgtacgacccaatgtacgaccaaccttatcctgaaagcttgcttagcaagctgaaaatcgtgtcacgttttcccaaaatcgtg 12703112  T
Q  101 tcacgat 107  Q
    |||||||    
T  12703113 tcacgat 12703119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 11383582 - 11383479
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||||||||| ||| |||||||||||||| ||||||||||||||||| |||||| ||| ||||||||| |||||||||||||||||||||||||||||||    
T  11383582 tcgtgacacggttgatgcgtacgacccaaagtacgaccaaccttatcttgaaaatttgcccagcaagctgaaaatcgtgtcacgttttcccaaaatcgtg 11383483  T
Q  101 tcac 104  Q
    ||||    
T  11383482 tcac 11383479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 4733619 - 4733513
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||||||||| |||||||||||||||||||||||||| |||  |||||||||||| |||  || ||||||||||||||||||||||||||||||||||||    
T  4733619 tcgtgacacggttggtgcgtacgacccaaggtacgacaaactgtatcctgaaaacgtgtttagaaagccgaaaatcgtgtcacgttttcccaaaatcgtg 4733520  T
Q  101 tcacgat 107  Q
    |||||||    
T  4733519 tcacgat 4733513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 1746592 - 1746699
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgt 99  Q
    ||||| |||| ||| ||||||||| ||||||||||||||||||||||||||||| |||| |||||||||| |||||||||||||| ||||||||||||||    
T  1746592 tcgtgccacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacgatttcccaaaatcgt 1746691  T
Q  100 gtcacgat 107  Q
    ||||||||    
T  1746692 gtcacgat 1746699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 6 - 84
Target Start/End: Complemental strand, 4283117 - 4283039
Alignment:
Q  6 acacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacg 84  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  4283117 acacgtttggtgcatacgacccaaggtacgaccaaccttatcctgaaaacttgcccagcaagccgaaaatcgtgtcacg 4283039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 4731452 - 4731346
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||||||||  ||||||| |||| |||||||||||||||| ||||| |||||||| |||||||||||||||||||| ||||| |||||||||||||||||    
T  4731452 tcgtgacacagttggtgcctacggcccaaggtacgaccaatcttattctgaaaacgtgtccagcaagccgaaaatcatgtcatgttttcccaaaatcgtg 4731353  T
Q  101 tcacgat 107  Q
    |||||||    
T  4731352 tcacgat 4731346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 34254702 - 34254805
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgt 99  Q
    ||||| |||| ||| ||||||||||||||||||||||||||||||||||||||| |||| ||||||| || |||||||||||||| ||||||||||||||    
T  34254702 tcgtgccacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaatcttgcccagcaatccaaaaatcgtgtcacgatttcccaaaatcgt 34254801  T
Q  100 gtca 103  Q
    ||||    
T  34254802 gtca 34254805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 34256878 - 34256985
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgt 99  Q
    ||||| |||| ||| ||||||||||||||||||| ||||| ||||||||||||| ||||  ||||||||| |||||||||||||| ||||||||||||||    
T  34256878 tcgtgccacgattgatgcgtacgacccaaggtacaaccaatcttatcctgaaaatcttgctcagcaagccaaaaatcgtgtcacgatttcccaaaatcgt 34256977  T
Q  100 gtcacgat 107  Q
    ||||||||    
T  34256978 gtcacgat 34256985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 3 - 107
Target Start/End: Original strand, 4743569 - 4743674
Alignment:
Q  3 gtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctg-aaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgt 101  Q
    |||||||| ||| ||||||||||||| ||||||||||||||||||||| ||||| || | |||||| ||||||||||||||||||| | |||||||||||    
T  4743569 gtgacacggttgatgcgtacgacccacggtacgaccaaccttatcctgaaaaacgtgccaagcaagtcgaaaatcgtgtcacgtttcctcaaaatcgtgt 4743668  T
Q  102 cacgat 107  Q
    ||||||    
T  4743669 cacgat 4743674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 10014953 - 10014847
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||||||||| ||| ||| ||||||||||||||||||||||||||||||| |||| || | |||| ||| |||||||||||| | || ||||||||||||    
T  10014953 tcgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtg 10014854  T
Q  101 tcacgat 107  Q
    |||||||    
T  10014853 tcacgat 10014847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 107
Target Start/End: Complemental strand, 42498003 - 42497902
Alignment:
Q  7 cacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacg 105  Q
    |||| ||| |||||| ||||||||||||||| |||||||||||||||| |||| |||||||||| | |||||||||||  ||||||||||||||||||||    
T  42498003 cacgattgatgcgtaggacccaaggtacgactaaccttatcctgaaaatcttgcccagcaagccaataatcgtgtcacaatttcccaaaatcgtgtcacg 42497904  T
Q  106 at 107  Q
    ||    
T  42497903 at 42497902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 31218051 - 31217947
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgt 99  Q
    ||||| |||| ||| |||||| || |||||||||||||||||||||||| |||| |||| ||| |||||| |||||||||||||| ||||||||||||||    
T  31218051 tcgtgtcacgattgatgcgtatgatccaaggtacgaccaaccttatcctaaaaatcttgcccaacaagccaaaaatcgtgtcacgatttcccaaaatcgt 31217952  T
Q  100 gtcac 104  Q
    |||||    
T  31217951 gtcac 31217947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 5702170 - 5702063
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaag-ccgaaaatcgtgtcacgttttcccaaaatcgt 99  Q
    |||||||||| ||||||||||| | |||||||||||||||||||||||||||||  |  ||||||||   ||||||||||||||||||| ||||||||||    
T  5702170 tcgtgacacgattggtgcgtacaatccaaggtacgaccaaccttatcctgaaaatgtacccagcaagtttgaaaatcgtgtcacgtttttccaaaatcgt 5702071  T
Q  100 gtcacgat 107  Q
    | ||||||    
T  5702070 gacacgat 5702063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 19945713 - 19945820
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgt 99  Q
    ||||| |||| ||| ||||||||| ||||||||||| ||||||||||||||||| |||  ||| |||||| |||||||||||||| ||||| ||||||||    
T  19945713 tcgtgccacgattgatgcgtacgatccaaggtacgatcaaccttatcctgaaaatcttccccaacaagccaaaaatcgtgtcacgatttcctaaaatcgt 19945812  T
Q  100 gtcacgat 107  Q
    ||||||||    
T  19945813 gtcacgat 19945820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 1345744 - 1345850
Alignment:
Q  2 cgtgacacgtttggtgcgtacgacccaaggt--acgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgt 99  Q
    ||||||| | ||| |||||||||||||||||  ||||||||||||||||||||||| |||| ||||||| |||||| ||||||| ||||| | |||||||    
T  1345744 cgtgacatggttgatgcgtacgacccaaggtgtacgaccaaccttatcctgaaaacgtgtcaagcaagctgaaaattgtgtcacattttctc-aaatcgt 1345842  T
Q  100 gtcacgat 107  Q
    ||||||||    
T  1345843 gtcacgat 1345850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 19175423 - 19175316
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaag-ccgaaaatcgtgtcacgttttcccaaaatcgt 99  Q
    ||||| |||| ||||||| ||||||||||||||  |||||||||||||||||||| |  ||||||||   ||||||| ||||||||||||||||||||||    
T  19175423 tcgtggcacgattggtgcatacgacccaaggtataaccaaccttatcctgaaaacgtacccagcaagtttgaaaatcatgtcacgttttcccaaaatcgt 19175324  T
Q  100 gtcacgat 107  Q
    | ||||||    
T  19175323 gacacgat 19175316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 4696318 - 4696264
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaac 55  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  4696318 tcgtgtcacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaac 4696264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 17982447 - 17982363
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgtccagcaagccgaaaatcgtgtcacg 84  Q
    ||||| |||| ||| ||||||||| |||||||||||||||||||||||| |||| |||| |||||||||| ||||||||||||||    
T  17982447 tcgtgccacgattgatgcgtacgatccaaggtacgaccaaccttatcctaaaaatcttgcccagcaagccaaaaatcgtgtcacg 17982363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 33351941 - 33351885
Alignment:
Q  4 tgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtc 60  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  33351941 tgacacgtttggtgcgtatgacccaaggtacgaccaaccttatcctgaatacttgtc 33351885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 19948695 - 19948779
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgtccagcaagccgaaaatcgtgtcacg 84  Q
    ||||| |||| ||| ||||||||| ||||||||||||||| |||||| | |||| ||||||||||||||| ||||||||||||||    
T  19948695 tcgtgccacgattgatgcgtacgatccaaggtacgaccaaacttatcataaaaatcttgtccagcaagccaaaaatcgtgtcacg 19948779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 131 - 208
Target Start/End: Complemental strand, 33351825 - 33351749
Alignment:
Q  131 aaaatcgtgacacgcttgctaaaccgtgtcacgattctattcatccccaacttcacaaatttgaaggcaaaaacaaca 208  Q
    ||||||||||||||||||||||| ||||||||||||||  |||| |  ||||||||||| ||||||||||| ||||||    
T  33351825 aaaatcgtgacacgcttgctaaatcgtgtcacgattctcatcattcttaacttcacaaa-ttgaaggcaaatacaaca 33351749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 44303633 - 44303564
Alignment:
Q  16 tgcgtacgacccaaggtacgaccaaccttatcct-gaaaacttgtccagcaagccgaaaatcgtgtcacg 84  Q
    |||||| || |||||||||||||||||||||||| |||| |||| |||||||||| ||||||||||||||    
T  44303633 tgcgtatgatccaaggtacgaccaaccttatcctggaaatcttgcccagcaagccaaaaatcgtgtcacg 44303564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 3051528 - 3051610
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcac 83  Q
    ||||| |||| ||| ||| |||||||||| ||||||||||||||||| ||||||| |||| | || ||| |||||||||||||    
T  3051528 tcgtgtcacgattgatgcatacgacccaatgtacgaccaaccttatcttgaaaacgtgtcaaacatgccaaaaatcgtgtcac 3051610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 107
Target Start/End: Original strand, 4456429 - 4456522
Alignment:
Q  15 gtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaag-ccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgat 107  Q
    |||||||||||||||  |||||||||||||||| ||||||| | | |||||||   |||||||  |||||||||||||||| ||||| ||||||    
T  4456429 gtgcgtacgacccaaaatacgaccaaccttatcgtgaaaacgtattcagcaagtttgaaaatcacgtcacgttttcccaaattcgtgacacgat 4456522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 190 - 240
Target Start/End: Complemental strand, 4733422 - 4733372
Alignment:
Q  190 tttgaaggcaaaaacaacattctccaccttaacttcaaattgatgatgatg 240  Q
    |||||||||| | |||||||||||||||||  |||||||||||||||||||    
T  4733422 tttgaaggcatacacaacattctccaccttggcttcaaattgatgatgatg 4733372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 107
Target Start/End: Complemental strand, 10929567 - 10929493
Alignment:
Q  33 acgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgat 107  Q
    ||||||||||||||||| ||||| |||| |||| ||| |||||||| ||||| ||   |||||||||||||||||    
T  10929567 acgaccaaccttatcctcaaaacgtgtcaagcatgccaaaaatcgtatcacgattgatcaaaatcgtgtcacgat 10929493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 23799266 - 23799212
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaac 55  Q
    |||||||||  |||||||||||||||||| |||||||||||||||| || |||||    
T  23799266 tcgtgacacaattggtgcgtacgacccaacgtacgaccaaccttattctaaaaac 23799212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 204 - 242
Target Start/End: Original strand, 34254895 - 34254933
Alignment:
Q  204 caacattctccaccttaacttcaaattgatgatgatgtc 242  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  34254895 caacattctccaccttgacttcaaattgatgatgatgtc 34254933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 107
Target Start/End: Complemental strand, 2627464 - 2627429
Alignment:
Q  72 aaatcgtgtcacgttttcccaaaatcgtgtcacgat 107  Q
    ||||||||||||| ||||||||||||||||||||||    
T  2627464 aaatcgtgtcacgatttcccaaaatcgtgtcacgat 2627429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 96
Target Start/End: Original strand, 7412764 - 7412830
Alignment:
Q  31 gtacgaccaaccttatcctgaaaacttgtccagcaag-ccgaaaatcgtgtcacgttttcccaaaat 96  Q
    ||||||||||| |||||||||||||||  ||||||||   ||||||||||||||| |||| ||||||    
T  7412764 gtacgaccaacgttatcctgaaaacttaaccagcaagtttgaaaatcgtgtcacgatttcacaaaat 7412830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 240
Target Start/End: Original strand, 41365393 - 41365439
Alignment:
Q  194 aaggcaaaaacaacattctccaccttaacttcaaattgatgatgatg 240  Q
    |||||| | |||||||||||||||||  |||||||||||||||||||    
T  41365393 aaggcatacacaacattctccaccttgccttcaaattgatgatgatg 41365439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 107
Target Start/End: Complemental strand, 1261562 - 1261525
Alignment:
Q  70 gaaaatcgtgtcacgttttcccaaaatcgtgtcacgat 107  Q
    ||||||||||||||| |||||||| |||||||||||||    
T  1261562 gaaaatcgtgtcacgatttcccaagatcgtgtcacgat 1261525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 91; Significance: 3e-44; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 42426609 - 42426715
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  42426609 tcgtgacatgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgcccagcaaaccgaaaattgtgtcacgttttcccaaaatcgtg 42426708  T
Q  101 tcacgat 107  Q
    |||||||    
T  42426709 tcacgat 42426715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 32636618 - 32636414
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctg-aaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgt 99  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||| |||||||||||||||||||    
T  32636618 tcgtgacacgtttggtgcgtaagacccaaggtacgaccaaccttatcctgaaaaacttgcccagcaagtcgaaaatcgtgccacgttttcccaaaatcgt 32636519  T
Q  100 gtcacga----------tgcaaaacatgctttcggcgttggaaaatcgtgacacgcttgctaaaccgtgtcacgattctattcatccccaacttcacaaa 189  Q
    |||||||          ||||||||||| |  | || | |  |||| ||||||||||||| ||| ||||||||||||||  |||| | ||||||||||||    
T  32636518 gtcacgattggacaccttgcaaaacatgttcactgcctag--aaatggtgacacgcttgccaaatcgtgtcacgattcttatcattctcaacttcacaaa 32636421  T
Q  190 tttgaag 196  Q
    |||||||    
T  32636420 tttgaag 32636414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 13487997 - 13487893
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    |||||||||||||||||    
T  13487997 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgcccagcaagccgaaaatcgtg--ctgttttcccaaaatcgtg 13487900  T
Q  101 tcacgat 107  Q
    |||||||    
T  13487899 tcacgat 13487893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 535697 - 535614
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacg 84  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  535697 tcgtgacacgtttggtgcatacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacg 535614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 13239546 - 13239440
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    ||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||| ||||||||| ||    
T  13239546 tcgtgtcacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagtcaaagatcgtgtcacgtttacccaaaatcttg 13239447  T
Q  101 tcacgat 107  Q
    |||||||    
T  13239446 tcacgat 13239440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 3 - 107
Target Start/End: Complemental strand, 5057623 - 5057519
Alignment:
Q  3 gtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtc 102  Q
    |||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||  || |||| ||||||| |||||||||||| |||||||||||||    
T  5057623 gtgacacggttgatgcgtacgaccaaaggtacgaccaaccttatcctgaaaacttgctcaacaagtcgaaaattgtgtcacgttttaccaaaatcgtgtc 5057524  T
Q  103 acgat 107  Q
    |||||    
T  5057523 acgat 5057519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 39468909 - 39468989
Alignment:
Q  4 tgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacg 84  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  39468909 tgacacgtttggtgcatacgacccaaggtacgaccaaccttatcctaaaaacgtgtccagcaagccgaaaatcgtgtcacg 39468989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 19806200 - 19806117
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacg 84  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || | |||||||||||||||||||||||    
T  19806200 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctaaaaacgtgcctagcaagccgaaaatcgtgtcacg 19806117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 27015108 - 27015025
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacg 84  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||| |||||||||||||||    
T  27015108 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacatgcccaacaagctgaaaatcgtgtcacg 27015025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 37438940 - 37438833
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgt 99  Q
    ||||| |||| ||| |||||||||||||||||||||| |||||||||||||||| |||| ||| |||||| ||||||||||||||||||||||||||| |    
T  37438940 tcgtgtcacgattgatgcgtacgacccaaggtacgacaaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgttttcccaaaatcat 37438841  T
Q  100 gtcacgat 107  Q
    ||||||||    
T  37438840 gtcacgat 37438833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 31 - 107
Target Start/End: Complemental strand, 38746534 - 38746458
Alignment:
Q  31 gtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgat 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||    
T  38746534 gtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgtttttccaaaaatgtgtcacgat 38746458  T

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Target: chr5; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 31 - 107
Target Start/End: Original strand, 42428822 - 42428898
Alignment:
Q  31 gtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgat 107  Q
    ||||||||||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  42428822 gtacgaccaaccttatcctaaaaacttgcccagcaagccaaaaatcgtgtcacgttttcccaaaatcgtgtcacgat 42428898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 16650996 - 16651098
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |  ||| ||||    |||||||||||||||||||||||||||||    
T  16650996 tcgtgacacggttggtgcgtacgatccaaggtacgaccaaccttatcctgaaaacgtacccaacaagttataaatcgtgtcacgttttcccaaaatcgtg 16651095  T
Q  101 tca 103  Q
    |||    
T  16651096 tca 16651098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 31 - 107
Target Start/End: Original strand, 30683312 - 30683388
Alignment:
Q  31 gtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgat 107  Q
    |||||||||||||||||||||||||||| | |||||| |||||||||||||||||||||||||||| ||||||||||    
T  30683312 gtacgaccaaccttatcctgaaaacttgcctagcaagtcgaaaatcgtgtcacgttttcccaaaattgtgtcacgat 30683388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 11916662 - 11916555
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaag-ccgaaaatcgtgtcacgttttcccaaaatcgt 99  Q
    |||||| ||| |||||||||||||||||||||||||||||||| ||||||||||| |  ||| ||||   ||||||||||||||||||||||||||||||    
T  11916662 tcgtgatacgattggtgcgtacgacccaaggtacgaccaacctgatcctgaaaacatacccaacaagtttgaaaatcgtgtcacgttttcccaaaatcgt 11916563  T
Q  100 gtcacgat 107  Q
    | ||||||    
T  11916562 gacacgat 11916555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 19 - 107
Target Start/End: Complemental strand, 40146825 - 40146737
Alignment:
Q  19 gtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgat 107  Q
    ||||||||||||||||||||||| || |||||||||| || ||| ||||| |||||||| ||||| |||||||||||||||||||||||    
T  40146825 gtacgacccaaggtacgaccaactttttcctgaaaacgtgaccaacaagctgaaaatcgagtcacattttcccaaaatcgtgtcacgat 40146737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 12083868 - 12083773
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaag-ccgaaaatcgtgtcacgttttcccaaaa 95  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||||||| |  ||| ||||   ||||||||||||||||||||||||||    
T  12083868 tcgtgacacgattggtgcatacgacccaaggtacgaccaaccttatcctgaaaacgtacccaacaagtttgaaaatcgtgtcacgttttcccaaaa 12083773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 14520636 - 14520743
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaag-ccgaaaatcgtgtcacgttttcccaaaatcgt 99  Q
    |||||||||| ||  |||||||||||||||||||||||||||||||||||||||| |  ||| ||||   |||||||||||||||||||||||||||| |    
T  14520636 tcgtgacacgattaatgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtacccaacaagtttgaaaatcgtgtcacgttttcccaaaatcat 14520735  T
Q  100 gtcacgat 107  Q
    | ||||||    
T  14520736 gacacgat 14520743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 25412556 - 25412472
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgtccagcaagccgaaaatcgtgtcacg 84  Q
    ||||| |||| ||| ||||||||| ||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||    
T  25412556 tcgtgccacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacg 25412472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 31004844 - 31004737
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcct-gaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgt 99  Q
    |||||||||| |||||||||||||||||| |||| ||||||||||||||  ||||| || ||||||||  ||| ||||| ||||||||||||| ||||||    
T  31004844 tcgtgacacgattggtgcgtacgacccaaagtacaaccaaccttatcctaaaaaacgtgcccagcaagttgaatatcgtatcacgttttcccacaatcgt 31004745  T
Q  100 gtcacgat 107  Q
    | ||||||    
T  31004744 gacacgat 31004737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 107
Target Start/End: Complemental strand, 9353007 - 9352918
Alignment:
Q  19 gtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaag-ccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgat 107  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||   ||||||||||||||| |||| || ||||||| ||||||    
T  9353007 gtacgacccaaggtacgaccaaccttatcctgaaaacttaaccagcaagtttgaaaatcgtgtcacgatttcacagaatcgtgccacgat 9352918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 13342855 - 13342771
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgtccagcaagccgaaaatcgtgtcacg 84  Q
    ||||| |||| ||| ||||||||| | ||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||    
T  13342855 tcgtgccacgattgatgcgtacgatctaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacg 13342771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 30182382 - 30182302
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgtccagcaagccgaaaatcgtgt 80  Q
    ||||| |||| ||| ||||||||| ||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||    
T  30182382 tcgtgccacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgt 30182302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 533545 - 533492
Alignment:
Q  31 gtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacg 84  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  533545 gtacgaccaaccttatcctgaaaacttgcccagcaagccgaaaaccgtgtcacg 533492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 38746579 - 38746535
Alignment:
Q  3 gtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatc 47  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  38746579 gtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatc 38746535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 16649997 - 16650044
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcc 48  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||    
T  16649997 tcgtgacacggttggtgcgtacgatccaaggtacgaccaaccttatcc 16650044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 36932023 - 36931984
Alignment:
Q  18 cgtacgacccaaggtacgaccaaccttatcctgaaaactt 57  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  36932023 cgtacgacccaaggtacgaccaaccttatcctgaaaactt 36931984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 36074433 - 36074503
Alignment:
Q  16 tgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgtccagcaagcc-gaaaatcgtgtcacg 84  Q
    ||||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||  ||||||||||||||    
T  36074433 tgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaaatcgtgtcacg 36074503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 107
Target Start/End: Complemental strand, 213068 - 213032
Alignment:
Q  71 aaaatcgtgtcacgttttcccaaaatcgtgtcacgat 107  Q
    |||||||||||||||||||||||||||||||||||||    
T  213068 aaaatcgtgtcacgttttcccaaaatcgtgtcacgat 213032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 203 - 240
Target Start/End: Complemental strand, 13487802 - 13487765
Alignment:
Q  203 acaacattctccaccttaacttcaaattgatgatgatg 240  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  13487802 acaacattctccaccttgacttcaaattgatgatgatg 13487765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 193
Target Start/End: Original strand, 16651137 - 16651198
Alignment:
Q  132 aaatcgtgacacgcttgctaaaccgtgtcacgattctattcatccccaacttcacaaatttg 193  Q
    |||||||| |||| |||||||| |||| |||||||||  |||| ||||||||||||||||||    
T  16651137 aaatcgtgtcacgtttgctaaatcgtgacacgattcttatcattcccaacttcacaaatttg 16651198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 107
Target Start/End: Original strand, 30683269 - 30683305
Alignment:
Q  71 aaaatcgtgtcacgttttcccaaaatcgtgtcacgat 107  Q
    |||||||||||||||||||||||||| ||||||||||    
T  30683269 aaaatcgtgtcacgttttcccaaaattgtgtcacgat 30683305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 107
Target Start/End: Original strand, 28751027 - 28751062
Alignment:
Q  72 aaatcgtgtcacgttttcccaaaatcgtgtcacgat 107  Q
    |||| |||||||||||||||||||||||||||||||    
T  28751027 aaattgtgtcacgttttcccaaaatcgtgtcacgat 28751062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 84
Target Start/End: Original strand, 15464958 - 15465012
Alignment:
Q  31 gtacgaccaaccttatcctgaaaacttgtccagcaag-ccgaaaatcgtgtcacg 84  Q
    |||||||||||||||||||||||||||  ||||||||   |||||||||||||||    
T  15464958 gtacgaccaaccttatcctgaaaacttaaccagcaagtttgaaaatcgtgtcacg 15465012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 107
Target Start/End: Original strand, 30631804 - 30631838
Alignment:
Q  73 aatcgtgtcacgttttcccaaaatcgtgtcacgat 107  Q
    |||||||||||| ||||||||||||||||||||||    
T  30631804 aatcgtgtcacgatttcccaaaatcgtgtcacgat 30631838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 107
Target Start/End: Original strand, 24136336 - 24136373
Alignment:
Q  70 gaaaatcgtgtcacgttttcccaaaatcgtgtcacgat 107  Q
    ||||||||||||||| |||||||| |||||||||||||    
T  24136336 gaaaatcgtgtcacgatttcccaagatcgtgtcacgat 24136373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 89; Significance: 5e-43; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 31659032 - 31658782
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  |||||||||  ||||| ||||||||||||||||||||||||    
T  31659032 tcgtgacacgtttggtgcgtacgacccaaggtacaaccaaccttatcctgaaaactttcccagcaagcaaaaaattgtgtcacgttttcccaaaatcgtg 31658933  T
Q  101 tcacga----------tgcaaaacatgctttcggcgttggaaaatcgtgacacgcttgctaaaccgtgtcacgattctattcatccccaacttcacaaat 190  Q
    ||||||          ||||||||| ||| ||| | ||| ||||||||||||||| |   ||| ||||||||||||    |  |  |||||||||||| |    
T  31658932 tcacgattgggcaccctgcaaaaca-gctctcgacattgcaaaatcgtgacacgcctatgaaatcgtgtcacgatttctctgttttccaacttcacaatt 31658834  T
Q  191 ttgaaggcaaaaacaacattctccaccttaacttcaaattgatgatgatgtc 242  Q
    ||||||| | | |||||||| ||||||||  |||||||||||||||||||||    
T  31658833 ttgaaggaatacacaacattatccaccttgccttcaaattgatgatgatgtc 31658782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 44454953 - 44454847
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  44454953 tcgtgacacgtttagtgcgtacgacccaaggtacaaccaaccttatcttgaaaacttgcccagcaagccgaaaatcgtgtcacgtttccccaaaatcgtg 44454854  T
Q  101 tcacgat 107  Q
    |||||||    
T  44454853 tcacgat 44454847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 11348295 - 11348189
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||  |||||||||||    
T  11348295 tcgtgacacgtttggtgcgtacgatccaatgtacgaccaaccttatcctgaaaacttgcccaacaagccgaaaatcgtgtcacgtttctccaaaatcgtg 11348196  T
Q  101 tcacgat 107  Q
    |||||||    
T  11348195 tcacgat 11348189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 37033661 - 37033767
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| |||||||||||||| |||| || |||||||||    
T  37033661 tcgtgacacgtttggtgcgtacgacccaaggtacaaccaaccttatcctgaaaacttgccctgcaaggcgaaaatcgtgtcatgtttcccgaaaatcgtg 37033760  T
Q  101 tcacgat 107  Q
    |||||||    
T  37033761 tcacgat 37033767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 37879483 - 37879589
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||| |||| |||||||||||    
T  37879483 tcgtgacatgtttggtgcgtgcgacccaaggtacgaccaaccttatcctaaaaacttgtccagtaagctgaaaatcgtgtcacatttttccaaaatcgtg 37879582  T
Q  101 tcacgat 107  Q
    |||||||    
T  37879583 tcacgat 37879589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 28220600 - 28220707
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagc-aagccgaaaatcgtgtcacgttttcccaaaatcgt 99  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| | || |||||||  || |||||||||||||||||||||||||||||||||||    
T  28220600 tcgtgacacgttttgtgcgtacgacccaaggtacgaccaaccttatcttaaatacttgtcgtgcaaagccgaaaatcgtgtcacgttttcccaaaatcgt 28220699  T
Q  100 gtcacgat 107  Q
    ||||||||    
T  28220700 gtcacgat 28220707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 3 - 107
Target Start/End: Original strand, 28223797 - 28223902
Alignment:
Q  3 gtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaa-gccgaaaatcgtgtcacgttttcccaaaatcgtgt 101  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| | || |||||||  |||| |||||||||||||||||||||||||||||||||||    
T  28223797 gtgacacgttttgtgcgtacgacccaaggtacgaccaaccttatcttaaatacttgtcgtgcaaagccgaaaatcgtgtcacgttttcccaaaatcgtgt 28223896  T
Q  102 cacgat 107  Q
    ||||||    
T  28223897 cacgat 28223902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 5 - 103
Target Start/End: Complemental strand, 193184 - 193086
Alignment:
Q  5 gacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtca 103  Q
    |||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||| || ||||||||| ||||||| ||||||    
T  193184 gacacgtttggtgcgtacgacccaaggtacgaccaatcttatcctaaaaacttgcccagcaagccgaaaatggtatcacgtttttccaaaattgtgtca 193086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 3 - 107
Target Start/End: Complemental strand, 3156658 - 3156555
Alignment:
Q  3 gtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtc 102  Q
    ||||||||||||||| ||| |||| |||||||||||||||||||||||||||| |||||||||| || |||||||||| | |||||||||||||||||||    
T  3156658 gtgacacgtttggtgtgtatgacc-aaggtacgaccaaccttatcctgaaaacgtgtccagcaaaccaaaaatcgtgttatgttttcccaaaatcgtgtc 3156560  T
Q  103 acgat 107  Q
    |||||    
T  3156559 acgat 3156555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 29135844 - 29135762
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcac 83  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||||||| ||||||    
T  29135844 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtgcccagcaagctgaaaatcatgtcac 29135762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 49918143 - 49918037
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||||||||| |||||| ||||||||||||||| ||||||||||||||||||||| || ||||||||   |||||||||||||||||| | |||||||||    
T  49918143 tcgtgacacgattggtgtgtacgacccaaggtatgaccaaccttatcctgaaaacgtgcccagcaagttaaaaatcgtgtcacgtttttcgaaaatcgtg 49918044  T
Q  101 tcacgat 107  Q
    |||||||    
T  49918043 tcacgat 49918037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 37070174 - 37070281
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaag-ccgaaaatcgtgtcacgttttcccaaaatcgt 99  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||||| |  ||| ||||   ||||||||||||||||||||||||||||||    
T  37070174 tcgtggcacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtacccaacaagtttgaaaatcgtgtcacgttttcccaaaatcgt 37070273  T
Q  100 gtcacgat 107  Q
    | ||||||    
T  37070274 gacacgat 37070281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 7 - 107
Target Start/End: Complemental strand, 3189140 - 3189038
Alignment:
Q  7 cacgtttggtgcgtacgacccaaggta-cgaccaaccttatcctgaaaa-cttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcac 104  Q
    |||| ||| |||||||||||||||||| |||||||||||||||| |||| |||| |||||||| |||||||||||||||||||||||||||| |||||||    
T  3189140 cacgattgatgcgtacgacccaaggtaacgaccaaccttatcctaaaaaacttgcccagcaagtcgaaaatcgtgtcacgttttcccaaaattgtgtcac 3189041  T
Q  105 gat 107  Q
    |||    
T  3189040 gat 3189038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 7 - 107
Target Start/End: Complemental strand, 3197957 - 3197855
Alignment:
Q  7 cacgtttggtgcgtacgacccaaggta-cgaccaaccttatcctgaaaa-cttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcac 104  Q
    |||| ||| |||||||||||||||||| |||||||||||||||| |||| |||| |||||||| |||||||||||||||||||||||||||| |||||||    
T  3197957 cacgattgatgcgtacgacccaaggtaacgaccaaccttatcctaaaaaacttgcccagcaagtcgaaaatcgtgtcacgttttcccaaaattgtgtcac 3197858  T
Q  105 gat 107  Q
    |||    
T  3197857 gat 3197855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 7 - 107
Target Start/End: Complemental strand, 3206775 - 3206673
Alignment:
Q  7 cacgtttggtgcgtacgacccaaggta-cgaccaaccttatcctgaaaa-cttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcac 104  Q
    |||| ||| |||||||||||||||||| |||||||||||||||| |||| |||| |||||||| |||||||||||||||||||||||||||| |||||||    
T  3206775 cacgattgatgcgtacgacccaaggtaacgaccaaccttatcctaaaaaacttgcccagcaagtcgaaaatcgtgtcacgttttcccaaaattgtgtcac 3206676  T
Q  105 gat 107  Q
    |||    
T  3206675 gat 3206673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 3 - 107
Target Start/End: Original strand, 13598809 - 13598914
Alignment:
Q  3 gtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaag-ccgaaaatcgtgtcacgttttcccaaaatcgtgt 101  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||| |  ||||||||   |||||||||||||| ||||||||||||| ||     
T  13598809 gtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtacccagcaagtttgaaaatcgtgtcacattttcccaaaatcatga 13598908  T
Q  102 cacgat 107  Q
    ||||||    
T  13598909 cacgat 13598914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 20762466 - 20762359
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgt 99  Q
    ||||| |||| ||| ||||| ||| | ||||||||||||||||||||||||||| |||| ||| |||||| |||||||||||||| ||||||||||||||    
T  20762466 tcgtgccacgattgatgcgttcgatcaaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgatttcccaaaatcgt 20762367  T
Q  100 gtcacgat 107  Q
    ||||||||    
T  20762366 gtcacgat 20762359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 30476822 - 30476905
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacg 84  Q
    ||||||||||||||||| |||||||||||||| | |||||||||||| |||||||||| ||||||| |||||||||||||||||    
T  30476822 tcgtgacacgtttggtgtgtacgacccaaggttcaaccaaccttatcttgaaaacttgcccagcaaaccgaaaatcgtgtcacg 30476905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 10925017 - 10924911
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||||||||| ||| |||||| ||||||||||| ||||||| ||||  |||||||||| | | |||||||||||||||||||| |||| |||||||||||    
T  10925017 tcgtgacacggttgatgcgtatgacccaaggtatgaccaactttattttgaaaacttgcctaccaagccgaaaatcgtgtcacatttttccaaaatcgtg 10924918  T
Q  101 tcacgat 107  Q
    |||||||    
T  10924917 tcacgat 10924911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 1833316 - 1833212
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaact-tgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgt 99  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||| |||||| | |   ||||||||| |||||||||| | ||||||||||||||||    
T  1833316 tcgtgacacgtttggtgcgtacaacccaaggtatgaccaaccttatcttgaaaaatgtactcagcaagccaaaaatcgtgttatgttttcccaaaatcgt 1833217  T
Q  100 gtcac 104  Q
    |||||    
T  1833216 gtcac 1833212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 3282113 - 3282220
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaag-ccgaaaatcgtgtcacgttttcccaaaatcgt 99  Q
    ||||| |||| |||||||||||||||||||||| ||||||||||||| ||||||| |  ||||||||   |||||||||||||||||||| |||||||||    
T  3282113 tcgtggcacgattggtgcgtacgacccaaggtatgaccaaccttatcttgaaaacgtacccagcaagtttgaaaatcgtgtcacgttttctcaaaatcgt 3282212  T
Q  100 gtcacgat 107  Q
    | ||||||    
T  3282213 gacacgat 3282220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 4553022 - 4553128
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||||||||| ||| |||||||||| || | |||||| ||||||||||||||||| |||| | |||| |||||||| | |||||||||| ||||||||||    
T  4553022 tcgtgacacggttgatgcgtacgactcacgatacgactaaccttatcctgaaaacgtgtcaaacaagtcgaaaatcatatcacgttttctcaaaatcgtg 4553121  T
Q  101 tcacgat 107  Q
    |||||||    
T  4553122 tcacgat 4553128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 13316692 - 13316776
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgtccagcaagccgaaaatcgtgtcacg 84  Q
    ||||| |||| ||| ||||||||| ||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||    
T  13316692 tcgtgccacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacg 13316776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 13547681 - 13547763
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacg 84  Q
    |||||||||| |||||||||||||||||||||||||||||||||||  ||||||| || ||||||||| |||||| ||||||||    
T  13547681 tcgtgacacggttggtgcgtacgacccaaggtacgaccaaccttat-ttgaaaacgtgcccagcaagctgaaaattgtgtcacg 13547763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 13549592 - 13549674
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacg 84  Q
    |||||||||| |||||||||||||||||||||||||||||||||||  ||||||| || ||||||||| |||||| ||||||||    
T  13549592 tcgtgacacggttggtgcgtacgacccaaggtacgaccaaccttat-ttgaaaacgtgcccagcaagctgaaaattgtgtcacg 13549674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 13604313 - 13604206
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaag-ccgaaaatcgtgtcacgttttcccaaaatcgt 99  Q
    ||||| |||| ||| | ||||||||||||||||||||||||||||||||||||||||  ||||||||   ||||||| ||||||| || | |||||||||    
T  13604313 tcgtgtcacgattgatacgtacgacccaaggtacgaccaaccttatcctgaaaacttaaccagcaagtttgaaaatcatgtcacgattccacaaaatcgt 13604214  T
Q  100 gtcacgat 107  Q
    ||||||||    
T  13604213 gtcacgat 13604206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 29652220 - 29652273
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa 54  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  29652220 tcgtgacacgattggtgtgtacgacccaaggtacgaccaaccttatcctgaaaa 29652273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 7 - 86
Target Start/End: Complemental strand, 21536255 - 21536175
Alignment:
Q  7 cacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaag-ccgaaaatcgtgtcacgtt 86  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||| |  ||||||||   |||||||||||||||||    
T  21536255 cacgattggtgcgtacgacccaaggtacgaccaacctcatcctgaaaacgtacccagcaagtttgaaaatcgtgtcacgtt 21536175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 107
Target Start/End: Original strand, 13659694 - 13659780
Alignment:
Q  18 cgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgat 107  Q
    ||||||||||| |||||||||||||||||   |  ||| |||| |||||||||||||||||| ||| ||||||||||||||| |||||||    
T  13659694 cgtacgacccacggtacgaccaaccttat---gtcaacgtgtcaagcaagccgaaaatcgtgacacattttcccaaaatcgtatcacgat 13659780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 46064712 - 46064629
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacg 84  Q
    ||||| |||| ||| | |||||||||||||||||||||||| ||||||||||||  || | |||| ||| ||||||||||||||    
T  46064712 tcgtgtcacggttgatacgtacgacccaaggtacgaccaactttatcctgaaaatgtgccaagcatgccaaaaatcgtgtcacg 46064629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 105
Target Start/End: Complemental strand, 16124327 - 16124245
Alignment:
Q  24 acccaaggtacgaccaaccttatcctgaaaacttgtccagcaag-ccgaaaatcgtgtcacgttttcccaaaatcgtgtcacg 105  Q
    |||||||||||||||||||||||||||||||| |  |||  |||   ||||||||||||||||||||| ||||||||| ||||    
T  16124327 acccaaggtacgaccaaccttatcctgaaaacgtacccaaaaagtttgaaaatcgtgtcacgttttccgaaaatcgtgacacg 16124245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 16455440 - 16455334
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    ||||| |||| ||| ||||||||||||||||||||| ||| |||||||||||||| || | | ||  || |||||| ||||||| || | |||||||||     
T  16455440 tcgtgtcacggttgatgcgtacgacccaaggtacgagcaaacttatcctgaaaacgtgccaaacataccaaaaatcatgtcacgattgctcaaaatcgta 16455341  T
Q  101 tcacgat 107  Q
    |||||||    
T  16455340 tcacgat 16455334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 130 - 196
Target Start/End: Original strand, 30476939 - 30477005
Alignment:
Q  130 gaaaatcgtgacacgcttgctaaaccgtgtcacgattctattcatccccaacttcacaaatttgaag 196  Q
    |||||||||||||||||| ||||| ||||||||||||||  |||| | ||||||||||| |||||||    
T  30476939 gaaaatcgtgacacgcttactaaatcgtgtcacgattcttatcattctcaacttcacaattttgaag 30477005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 104
Target Start/End: Original strand, 22819852 - 22819940
Alignment:
Q  16 tgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcac 104  Q
    ||||||||||||||||||||||||| ||||| |||||||| |||| | || ||  |||||| ||||||  |||| ||||||| ||||||    
T  22819852 tgcgtacgacccaaggtacgaccaaacttattctgaaaacgtgtcaaacatgcgaaaaatcatgtcacagtttctcaaaatcatgtcac 22819940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 54
Target Start/End: Complemental strand, 15820086 - 15820048
Alignment:
Q  16 tgcgtacgacccaaggtacgaccaaccttatcctgaaaa 54  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  15820086 tgcgtacgacccaaggtacgaccaaccttatcctaaaaa 15820048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 26644588 - 26644484
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagcc-gaaaatcgtgtcacgttttcccaaaatcgt 99  Q
    ||||| |||| |||||||||||||||||   ||||||| ||||||| |||||||  |  ||| ||||   |||||||||||||||||||| |||||||||    
T  26644588 tcgtgccacgattggtgcgtacgaccca---tacgaccgaccttattctgaaaaggtacccaacaagtttgaaaatcgtgtcacgttttcacaaaatcgt 26644492  T
Q  100 gtcacgat 107  Q
    | ||||||    
T  26644491 gccacgat 26644484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 19361131 - 19361023
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaa-ccttatcctgaaaacttgtccagcaagcc-gaaaatcgtgtcacgttttcccaaaatcg 98  Q
    ||||| |||| ||||| |||||| | ||||||||||||   |||||||||| ||||||  | ||||||   ||||||||||||||| |||||||| ||||    
T  19361131 tcgtgtcacgattggtacgtacgtcacaaggtacgacctgtccttatcctggaaacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcg 19361032  T
Q  99 tgtcacgat 107  Q
    |||||||||    
T  19361031 tgtcacgat 19361023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 107
Target Start/End: Complemental strand, 9986931 - 9986896
Alignment:
Q  72 aaatcgtgtcacgttttcccaaaatcgtgtcacgat 107  Q
    ||||||||||||| ||||||||||||||||||||||    
T  9986931 aaatcgtgtcacgatttcccaaaatcgtgtcacgat 9986896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 107
Target Start/End: Complemental strand, 19365916 - 19365879
Alignment:
Q  70 gaaaatcgtgtcacgttttcccaaaatcgtgtcacgat 107  Q
    ||||||||||||||| |||||||| |||||||||||||    
T  19365916 gaaaatcgtgtcacgatttcccaagatcgtgtcacgat 19365879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 88; Significance: 2e-42; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 2837221 - 2837324
Alignment:
Q  4 tgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||  ||||||||||||||||||||||||||||||||||    
T  2837221 tgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttacccagcaaggtgaaaatcgtgtcacgttttcccaaaatcgtgtca 2837320  T
Q  104 cgat 107  Q
    ||||    
T  2837321 cgat 2837324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 3 - 107
Target Start/End: Original strand, 20522631 - 20522735
Alignment:
Q  3 gtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtc 102  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||| || ||||||||  |||||||||||||||||||| |||||||||| |    
T  20522631 gtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtgcccagcaagttgaaaatcgtgtcacgttttctcaaaatcgtgac 20522730  T
Q  103 acgat 107  Q
    |||||    
T  20522731 acgat 20522735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 34389257 - 34389364
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaag-ccgaaaatcgtgtcacgttttcccaaaatcgt 99  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |  ||||||||   ||||||||||||||||||||||||||||||    
T  34389257 tcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtacccagcaagtttgaaaatcgtgtcacgttttcccaaaatcgt 34389356  T
Q  100 gtcacgat 107  Q
    ||||||||    
T  34389357 gtcacgat 34389364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 3 - 107
Target Start/End: Original strand, 36318385 - 36318490
Alignment:
Q  3 gtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttccc-aaaatcgtgt 101  Q
    |||||||| |||||||||||||  ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||| ||||||||||    
T  36318385 gtgacacggttggtgcgtacgattcaaggtacgaccaaccttatcctgaaaacgtggccagcaagccgaaaatcgtgtcacgtttccccaaaaatcgtgt 36318484  T
Q  102 cacgat 107  Q
    ||||||    
T  36318485 cacgat 36318490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 107
Target Start/End: Original strand, 36988464 - 36988556
Alignment:
Q  16 tgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgat 107  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||| |||||||||    
T  36988464 tgcgtacgacccaaggtacgaccaaccttatcctgaaaaacttgcccagcaagtcgaaaatcgtgtcacgttttcccaaaatcatgtcacgat 36988556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 35447475 - 35447575
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||  ||| |||| ||||||||||| ||||||||||||||||    
T  35447475 tcgtgacacgtttggtgcgtacgacccaaggtacgagcaaccttatcttgaaaacttgcccgacaaaccgataatcgtgtcacattttcccaaaatcgtg 35447574  T
Q  101 t 101  Q
    |    
T  35447575 t 35447575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 21630352 - 21630458
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||||||||| |||||| ||||||||||| ||||||||||||||||||||||||| || ||||||||  ||||||||||||| ||||||||||||| |||    
T  21630352 tcgtgacacgattggtgtgtacgacccaaagtacgaccaaccttatcctgaaaacgtgcccagcaagttgaaaatcgtgtcatgttttcccaaaattgtg 21630451  T
Q  101 tcacgat 107  Q
     ||||||    
T  21630452 acacgat 21630458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 12 - 100
Target Start/End: Complemental strand, 14698688 - 14698600
Alignment:
Q  12 ttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||  || ||| ||||  |||||||||||||||||||||||||||||||    
T  14698688 ttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaatgtgcccaacaagttgaaaatcgtgtcacgttttcccaaaatcgtg 14698600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 31 - 107
Target Start/End: Complemental strand, 39284661 - 39284585
Alignment:
Q  31 gtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgat 107  Q
    |||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||    
T  39284661 gtacgaccaaccttatcctgaaaactttcccagcaagccgaaaattgtgtcacgttttcccaaaatcgtgtcacgat 39284585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 33528314 - 33528207
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaag-ccgaaaatcgtgtcacgttttcccaaaatcgt 99  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||| |||||||| |  ||||||||   ||||||||||||||||||||||||||||||    
T  33528314 tcgtgacacgattggtgcgtacgacccaaggtacgatcaaccttattctgaaaacgtacccagcaagtttgaaaatcgtgtcacgttttcccaaaatcgt 33528215  T
Q  100 gtcacgat 107  Q
    | ||||||    
T  33528214 gacacgat 33528207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 39483283 - 39483390
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaag-ccgaaaatcgtgtcacgttttcccaaaatcgt 99  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |  ||| ||||   ||||||||||||||||||||||||||||||    
T  39483283 tcgtgacacgattggtgcgtaagacccaaggtacgaccaaccttatcctgaaaacgtacccaacaagtttgaaaatcgtgtcacgttttcccaaaatcgt 39483382  T
Q  100 gtcacgat 107  Q
    | ||||||    
T  39483383 gacacgat 39483390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 5723628 - 5723712
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgtccagcaagccgaaaatcgtgtcacg 84  Q
    ||||| |||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  5723628 tcgtgccacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaatcttgtccagcaagccaaaaatcgtgtcacg 5723712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 10706942 - 10706843
Alignment:
Q  2 cgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaag-ccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||| |||| |||||| ||||||||||||||||||||||||||||||| ||||| | |||||||||   |||||||||||||||||||||||||||||||    
T  10706942 cgtggcacgattggtgtgtacgacccaaggtacgaccaaccttatccttaaaacgtatccagcaagtttgaaaatcgtgtcacgttttcccaaaatcgtg 10706843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 100
Target Start/End: Original strand, 17865589 - 17865684
Alignment:
Q  6 acacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaag-ccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| |  ||||||||   |||||||||||||| ||||||||||||||||    
T  17865589 acacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtacccagcaagtttgaaaatcgtgtcacattttcccaaaatcgtg 17865684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 45099549 - 45099442
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgt 99  Q
    ||||| |||| ||| |||||||||  |||||||||||||||||||||||||||| |||| |||||||||| |||||||||||||  ||||||||||| ||    
T  45099549 tcgtgccacgattgatgcgtacgattcaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacaatttcccaaaattgt 45099450  T
Q  100 gtcacgat 107  Q
    ||||||||    
T  45099449 gtcacgat 45099442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 33118542 - 33118648
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||| ||||||  || ||||||||  |||||| |||||||||||||| |||| ||||    
T  33118542 tcgtgacacgattggtgcgtacgacccaaggtacggccaaccttatcttgaaaatgtgcccagcaagttgaaaattgtgtcacgttttcctaaaaacgtg 33118641  T
Q  101 tcacgat 107  Q
     ||||||    
T  33118642 acacgat 33118648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 23078162 - 23078062
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaag-ccgaaaatcgtgtcacgttttcccaaaatcgt 99  Q
    ||||| |||| ||||||||||||||||||| |||||||||||||||||||||||| |  ||| ||||   ||||||||||||||||||||||||||||||    
T  23078162 tcgtggcacgattggtgcgtacgacccaagatacgaccaaccttatcctgaaaacgtacccaacaagtttgaaaatcgtgtcacgttttcccaaaatcgt 23078063  T
Q  100 g 100  Q
    |    
T  23078062 g 23078062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 28258868 - 28258761
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaag-ccgaaaatcgtgtcacgttttcccaaaatcgt 99  Q
    ||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||   ||||||||||||||| |||| |||||| ||    
T  28258868 tcgtgccacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaacttaaccagcaagtttgaaaatcgtgtcacgatttcacaaaattgt 28258769  T
Q  100 gtcacgat 107  Q
    | ||||||    
T  28258768 gccacgat 28258761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 31 - 107
Target Start/End: Complemental strand, 29867644 - 29867567
Alignment:
Q  31 gtacgaccaaccttatcctgaaaa-cttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgat 107  Q
    |||| |||||||||||| |||||| |||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  29867644 gtacaaccaaccttatcttgaaaaacttgcccagcaagtcgaaaatcgtgtcacgttttcccaaaatcgtgtcacgat 29867567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 2334791 - 2334875
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgtccagcaagccgaaaatcgtgtcacg 84  Q
    ||||| |||| ||| || |||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||    
T  2334791 tcgtgtcacgattgatgtgtacgacccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacg 2334875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 4503521 - 4503590
Alignment:
Q  16 tgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgtccagcaagccgaaaatcgtgtcacg 84  Q
    ||||||||| ||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||    
T  4503521 tgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacg 4503590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 31 - 107
Target Start/End: Original strand, 6595398 - 6595475
Alignment:
Q  31 gtacgaccaaccttatcctgaaaa-cttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgat 107  Q
    ||||||| |||||||||||||||| || | |||||||||| |||||||||||||||||||||||||| ||||||||||    
T  6595398 gtacgactaaccttatcctgaaaatctagcccagcaagccaaaaatcgtgtcacgttttcccaaaattgtgtcacgat 6595475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 12 - 106
Target Start/End: Complemental strand, 8389828 - 8389732
Alignment:
Q  12 ttggtgcgtacgacccaaggtacgaccaaccttatcctg-aaaacttgtccagcaag-ccgaaaatcgtgtcacgttttcccaaaatcgtgtcacga 106  Q
    |||||||||||||||||||||||| |||||||||||||| ||||| |   |||||||   ||||||||||||||||||||||||||||||| |||||    
T  8389828 ttggtgcgtacgacccaaggtacgtccaaccttatcctgaaaaacgtactcagcaagtttgaaaatcgtgtcacgttttcccaaaatcgtgacacga 8389732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 36206054 - 36206123
Alignment:
Q  16 tgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgtccagcaagccgaaaatcgtgtcacg 84  Q
    ||||||| | ||||||||||||||||||||||||||||| |||  |||||||||| ||||||||||||||    
T  36206054 tgcgtacaatccaaggtacgaccaaccttatcctgaaaatctttcccagcaagccaaaaatcgtgtcacg 36206123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 33 - 107
Target Start/End: Complemental strand, 17863955 - 17863880
Alignment:
Q  33 acgaccaaccttatcctgaaaa-cttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgat 107  Q
    ||||||||||||||||| |||| |||| ||||||||   ||||||||||||||||||||||||||  |||||||||    
T  17863955 acgaccaaccttatcctcaaaaacttgcccagcaagtaaaaaatcgtgtcacgttttcccaaaattatgtcacgat 17863880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 107
Target Start/End: Original strand, 40015319 - 40015419
Alignment:
Q  7 cacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacga 106  Q
    |||| ||| ||| ||||| |||||||||||||||| ||||| ||||||| |||| | || ||| |||||||||||||| || | ||||||  ||||||||    
T  40015319 cacgattgatgcttacgatccaaggtacgaccaacattatcatgaaaacgtgtcaatcatgccaaaaatcgtgtcacgattgctcaaaattatgtcacga 40015418  T
Q  107 t 107  Q
    |    
T  40015419 t 40015419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 13569737 - 13569789
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa 54  Q
    |||||||||| ||||||| ||||| ||||||||||| |||||||||||||||||    
T  13569737 tcgtgacacgattggtgcttacgatccaaggtacga-caaccttatcctgaaaa 13569789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 30833140 - 30833032
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaa-ccttatcctgaaaacttgtccagcaagcc-gaaaatcgtgtcacgttttcccaaaatcg 98  Q
    ||||| |||| ||||| |||||| | ||||||||||||   |||||||||| ||||||  | ||||||   ||||||||||||||| |||||||| ||||    
T  30833140 tcgtgtcacgattggtacgtacgtcacaaggtacgacctgtccttatcctggaaacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcg 30833041  T
Q  99 tgtcacgat 107  Q
    |||||||||    
T  30833040 tgtcacgat 30833032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 242
Target Start/End: Original strand, 39483476 - 39483535
Alignment:
Q  184 cacaaatttgaaggcaa-aaacaacattctccaccttaacttcaaattgatgatgatgtc 242  Q
    ||||||||||||| ||| ||||||||||||||||||| ||||| ||||| || |||||||    
T  39483476 cacaaatttgaagccaataaacaacattctccaccttgacttctaattggtggtgatgtc 39483535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 107
Target Start/End: Original strand, 25410118 - 25410155
Alignment:
Q  70 gaaaatcgtgtcacgttttcccaaaatcgtgtcacgat 107  Q
    ||||||||||||||| |||||||| |||||||||||||    
T  25410118 gaaaatcgtgtcacgatttcccaagatcgtgtcacgat 25410155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 107
Target Start/End: Complemental strand, 7450905 - 7450870
Alignment:
Q  71 aaaatcgtgtcacgttttcccaaaatcgtgtcacgat 107  Q
    ||||||||||||||||||||| |||||||||||||||    
T  7450905 aaaatcgtgtcacgttttccc-aaatcgtgtcacgat 7450870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 11134 - 11028
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||| ||||||||||||    
T  11134 tcgtgacacgtttggtgcgtacgacccaatgtacgaccaaccttatcctgaaaacttgcccagcaaaccgaaaatcgtgtcacatttccccaaaatcgtg 11035  T
Q  101 tcacgat 107  Q
    |||||||    
T  11034 tcacgat 11028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 86; Significance: 3e-41; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 603612 - 603717
Alignment:
Q  2 cgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgt 101  Q
    ||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  603612 cgtgacacgtttggtgcgtacgatccaagatacgatcaaccttatcctgaaaacttgcccagcaagccgaaaatcatgtcacgttttcccaaaatcgtgt 603711  T
Q  102 cacgat 107  Q
    ||||||    
T  603712 cacgat 603717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 3 - 107
Target Start/End: Original strand, 22964107 - 22964211
Alignment:
Q  3 gtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtc 102  Q
    ||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||    
T  22964107 gtgacacgtttggcgcgtacgatacaaggtacgaccaaccttatcctgaaaacttgtccagcaagccaaaaatcgtgtcacgttttcccaaaatcgtatc 22964206  T
Q  103 acgat 107  Q
    |||||    
T  22964207 acgat 22964211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 3 - 107
Target Start/End: Complemental strand, 23824286 - 23824182
Alignment:
Q  3 gtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtc 102  Q
    ||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||    
T  23824286 gtgacacgtttggcgcgtacgatacaaggtacgaccaaccttatcctgaaaacttgtccagcaagccaaaaatcgtgtcacgttttcccaaaatcgtatc 23824187  T
Q  103 acgat 107  Q
    |||||    
T  23824186 acgat 23824182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 9183384 - 9183490
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    ||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||    
T  9183384 tcgtgtcacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgcccagcaagtcaaaaatcgtgtcacgttttcccaaaatcgtg 9183483  T
Q  101 tcacgat 107  Q
    |||||||    
T  9183484 tcacgat 9183490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 21593242 - 21593136
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||||||||| ||||| || ||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||| |||    
T  21593242 tcgtgacacggttggtacgaacgacccaaggtacgaccaaccttatcctaaaaacatgcccagcaagccgaaaatcgtgtcacgttttcccaaaattgtg 21593143  T
Q  101 tcacgat 107  Q
    |||||||    
T  21593142 tcacgat 21593136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 12 - 105
Target Start/End: Complemental strand, 26661514 - 26661421
Alignment:
Q  12 ttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacg 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||| |||||| |||||||||||||||||||||    
T  26661514 ttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgagtccagcaagtcgaaaatcttgtcacattttcccaaaatcgtgtcacg 26661421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 12 - 105
Target Start/End: Complemental strand, 26767485 - 26767392
Alignment:
Q  12 ttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacg 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||| |||||| |||||||||||||||||||||    
T  26767485 ttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgagtccagcaagtcgaaaatcttgtcacattttcccaaaatcgtgtcacg 26767392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 3809304 - 3809404
Alignment:
Q  4 tgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtca 103  Q
    |||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||| |||||||||||||||    
T  3809304 tgacacatttggtacgtacgacccaaggtacgaccaaccttatcctgaaaactt-tcc--caagccgaaaatcgtgtcacgtttccccaaaatcgtgtca 3809400  T
Q  104 cgat 107  Q
    ||||    
T  3809401 cgat 3809404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 5571954 - 5571848
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    ||||| |||| |||||||||||||||||||||||||||||||||| ||| ||||| || ||||||||  |||||||||||||||||||| ||||||||||    
T  5571954 tcgtgtcacgattggtgcgtacgacccaaggtacgaccaaccttaacctaaaaacgtgcccagcaagttgaaaatcgtgtcacgttttctcaaaatcgtg 5571855  T
Q  101 tcacgat 107  Q
     ||||||    
T  5571854 acacgat 5571848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 24435662 - 24435556
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||||||||| || | | ||||  |||||||||||||||||||||||||||| ||    
T  24435662 tcgtgacacggttggtgcgtacaacccaaggtacgaccaaccttatcctgaaaacgtgccaaacaagttgaaaatcgtgtcacgttttcccaaaatcatg 24435563  T
Q  101 tcacgat 107  Q
     ||||||    
T  24435562 acacgat 24435556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 31979924 - 31980030
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||||||||| |||||||||||||| ||| ||||||||||||||||||||||||| || ||||||||  |||||| |||||||||||| |||||||||||    
T  31979924 tcgtgacacgattggtgcgtacgactcaaagtacgaccaaccttatcctgaaaacgtgcccagcaagttgaaaattgtgtcacgtttttccaaaatcgtg 31980023  T
Q  101 tcacgat 107  Q
     ||||||    
T  31980024 acacgat 31980030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 18234490 - 18234597
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaag-ccgaaaatcgtgtcacgttttcccaaaatcgt 99  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |  ||||||||   ||||||||| |||||||||||||||||| |    
T  18234490 tcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtacccagcaagtttgaaaatcgtatcacgttttcccaaaatcct 18234589  T
Q  100 gtcacgat 107  Q
    | ||||||    
T  18234590 gacacgat 18234597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 10076881 - 10076783
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgt 99  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |   |||||||   |||||||| ||||||||||||||||||||    
T  10076881 tcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtaatcagcaagttaaaaatcgtatcacgttttcccaaaatcgt 10076783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 5407282 - 5407389
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgt 99  Q
    ||||| |||| ||| |||||||||||||||||||||||||||||||| |||||| |||| |||||||||| ||||  |||||||| ||| ||||||||||    
T  5407282 tcgtgtcacgattgatgcgtacgacccaaggtacgaccaaccttatcttgaaaatcttgcccagcaagccaaaaaatgtgtcacgattttccaaaatcgt 5407381  T
Q  100 gtcacgat 107  Q
    ||||||||    
T  5407382 gtcacgat 5407389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 5411607 - 5411714
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgt 99  Q
    ||||| |||| ||| |||||||||||||||||||||||||||||||| |||||| |||| |||||||||| ||||  |||||||| ||| ||||||||||    
T  5411607 tcgtgccacgattgatgcgtacgacccaaggtacgaccaaccttatcttgaaaatcttgcccagcaagccaaaaaatgtgtcacgattttccaaaatcgt 5411706  T
Q  100 gtcacgat 107  Q
    ||||||||    
T  5411707 gtcacgat 5411714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 38 - 105
Target Start/End: Complemental strand, 17759494 - 17759427
Alignment:
Q  38 caaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacg 105  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  17759494 caaccttatcctgaaaacttgtccagcaagccgaaaattgtgtcacgtttccccaaaatcgtgtcacg 17759427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 5017186 - 5017078
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaact-tgtccagcaag-ccgaaaatcgtgtcacgttttcccaaaatcg 98  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||| | |  |||| |||   |||||||||||||||||||| ||||||||    
T  5017186 tcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaaatgtacccagtaagtttgaaaatcgtgtcacgttttctcaaaatcg 5017087  T
Q  99 tgtcacgat 107  Q
    || ||||||    
T  5017086 tgacacgat 5017078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 5413822 - 5413906
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgtccagcaagccgaaaatcgtgtcacg 84  Q
    ||||| |||| ||| ||||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||    
T  5413822 tcgtgccacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacg 5413906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 31086163 - 31086055
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctg-aaaacttgtccagcaag-ccgaaaatcgtgtcacgttttcccaaaatcg 98  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| |  | ||||||   ||||||||||||||||||| |||||||||    
T  31086163 tcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaaacgtacctagcaagtttgaaaatcgtgtcacgtttttccaaaatcg 31086064  T
Q  99 tgtcacgat 107  Q
    || ||||||    
T  31086063 tgacacgat 31086055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 26954677 - 26954764
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgtttt 88  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||  |||| |||| ||| ||||||||| ||||||||    
T  26954677 tcgtgacacggttgatgcgtacgacccaaggtacgaccaaccttatcctgaaaatgtgtcaagcatgccaaaaatcgtgacacgtttt 26954764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 5406572 - 5406656
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgtccagcaagccgaaaatcgtgtcacg 84  Q
    ||||| |||| ||| |||||||||||||||||||||||||||||||||| |||| |||| |||||||||| ||||||||||||||    
T  5406572 tcgtgccacgattgatgcgtacgacccaaggtacgaccaaccttatcctaaaaatcttgcccagcaagccaaaaatcgtgtcacg 5406656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 5410897 - 5410981
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgtccagcaagccgaaaatcgtgtcacg 84  Q
    ||||| |||| ||| |||||||||||||||||||||||||||||||||| |||| |||| |||||||||| ||||||||||||||    
T  5410897 tcgtgccacgattgatgcgtacgacccaaggtacgaccaaccttatcctaaaaatcttgcccagcaagccaaaaatcgtgtcacg 5410981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 16452814 - 16452898
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgtccagcaagccgaaaatcgtgtcacg 84  Q
    ||||| |||| ||| ||||||||||||||||||||||||||||||||||||||| |||  |||||||||| ||||||||||||||    
T  16452814 tcgtgccacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaatctttcccagcaagccaaaaatcgtgtcacg 16452898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 30834911 - 30834995
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgtccagcaagccgaaaatcgtgtcacg 84  Q
    ||||| |||| ||| ||||||||| ||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||    
T  30834911 tcgtgccacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacg 30834995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 33160728 - 33160812
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgtccagcaagccgaaaatcgtgtcacg 84  Q
    ||||| |||| ||| |||||||||||||| |||||||||||||||||||||||| |||| |||||||||| ||||||||||||||    
T  33160728 tcgtgtcacgattgatgcgtacgacccaatgtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacg 33160812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 21272676 - 21272573
Alignment:
Q  4 tgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtca 103  Q
    ||||||| ||||||||||||| |||||||| ||||||||||||||||||||| || | | || | | ||||||||| |||| || |||||||||||||||    
T  21272676 tgacacggttggtgcgtacgatccaaggtatgaccaaccttatcctgaaaacgtgccaaacatgtcaaaaatcgtgacacgattacccaaaatcgtgtca 21272577  T
Q  104 cgat 107  Q
    ||||    
T  21272576 cgat 21272573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 24714779 - 24714884
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||||||||| ||||  |||| ||||||  |||||||||| |||||||||||||| || ||||||||  ||||||||||||||||||| || ||||||||    
T  24714779 tcgtgacacggttggatcgtatgacccacagtacgaccaatcttatcctgaaaacgtgcccagcaagttgaaaatcgtgtcacgtttttcc-aaatcgtg 24714877  T
Q  101 tcacgat 107  Q
     ||||||    
T  24714878 gcacgat 24714884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 5757150 - 5757070
Alignment:
Q  20 tacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaag-ccgaaaatcgtgtcacgttttcccaaaatcgt 99  Q
    ||||||| ||||||||||||||||||||||||||||||  ||||||||   ||||||||||||||| |||| |||||||||    
T  5757150 tacgaccaaaggtacgaccaaccttatcctgaaaacttaaccagcaagtttgaaaatcgtgtcacgatttcacaaaatcgt 5757070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 23896739 - 23896838
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaag-ccgaaaatcgtgtcacgttttcccaaaatcgt 99  Q
    ||||| |||| ||| | ||||||||| ||||||||||||||||||||||||||||||  ||||||||    |||||||||||||| |||| |||||||||    
T  23896739 tcgtgccacgattgatacgtacgaccgaaggtacgaccaaccttatcctgaaaacttaaccagcaagtttaaaaatcgtgtcacgatttcacaaaatcgt 23896838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 33211559 - 33211664
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    |||||||| | |||||||||||||||||| ||||||  |||| |||||| ||||| || ||| |||||| |||||| || |||||||| |||||||||||    
T  33211559 tcgtgacatggttggtgcgtacgacccaaagtacgataaaccatatcctaaaaacgtgcccaacaagcc-aaaatcatgacacgtttttccaaaatcgtg 33211657  T
Q  101 tcacgat 107  Q
    | |||||    
T  33211658 ttacgat 33211664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 31405048 - 31405132
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaa-acttgtccagcaagccgaaaatcgtgtcacg 84  Q
    ||||| |||| ||| ||||||||||| ||||||||||||||||||||||||||  |||  |||||||||| |||| |||||||||    
T  31405048 tcgtgccacgattgatgcgtacgacctaaggtacgaccaaccttatcctgaaagtctttcccagcaagccaaaaaacgtgtcacg 31405132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 54
Target Start/End: Original strand, 16452718 - 16452756
Alignment:
Q  16 tgcgtacgacccaaggtacgaccaaccttatcctgaaaa 54  Q
    |||||||||||||||||||||||||||||||||||||||    
T  16452718 tgcgtacgacccaaggtacgaccaaccttatcctgaaaa 16452756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 188 - 240
Target Start/End: Original strand, 5407497 - 5407549
Alignment:
Q  188 aatttgaaggcaaaaacaacattctccaccttaacttcaaattgatgatgatg 240  Q
    ||||||||| || | ||||||||||||||||| ||||||||||||||||||||    
T  5407497 aatttgaagacatacacaacattctccaccttgacttcaaattgatgatgatg 5407549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 188 - 240
Target Start/End: Original strand, 5411822 - 5411874
Alignment:
Q  188 aatttgaaggcaaaaacaacattctccaccttaacttcaaattgatgatgatg 240  Q
    ||||||||| || | ||||||||||||||||| ||||||||||||||||||||    
T  5411822 aatttgaagacatacacaacattctccaccttgacttcaaattgatgatgatg 5411874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 240
Target Start/End: Original strand, 5406729 - 5406781
Alignment:
Q  188 aatttgaaggcaaaaacaacattctccaccttaacttcaaattgatgatgatg 240  Q
    ||||||||| || | ||||||||||||||||| |||| |||||||||||||||    
T  5406729 aatttgaagacatacacaacattctccaccttgacttgaaattgatgatgatg 5406781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 240
Target Start/End: Original strand, 5411054 - 5411106
Alignment:
Q  188 aatttgaaggcaaaaacaacattctccaccttaacttcaaattgatgatgatg 240  Q
    ||||||||| || | ||||||||||||||||| |||| |||||||||||||||    
T  5411054 aatttgaagacatacacaacattctccaccttgacttgaaattgatgatgatg 5411106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 107
Target Start/End: Original strand, 22709497 - 22709534
Alignment:
Q  70 gaaaatcgtgtcacgttttcccaaaatcgtgtcacgat 107  Q
    ||||||||||||||| |||||||| |||||||||||||    
T  22709497 gaaaatcgtgtcacgatttcccaagatcgtgtcacgat 22709534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 17638 - 17742
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    ||||||||||||||||||||||||| || |||||||||||||||||| ||||| |||| |||||||||| ||||||||||||||||||||||||||||||    
T  17638 tcgtgacacgtttggtgcgtacgactcagggtacgaccaaccttatcatgaaagcttgcccagcaagccaaaaatcgtgtcacgttttcccaaaatcgtg 17737  T
Q  101 tcacg 105  Q
    |||||    
T  17738 tcacg 17742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 20789 - 20891
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| || |||||||  ||| |||||||||||||||||||||||||||||||||||||    
T  20789 tcgtgacacgtttagtgcgtacgacccaaggtacgaccaaccttattctaaaaactttcccaacaagccgaaaatcgtgtcacgttttcccaaaatcgtg 20888  T
Q  101 tca 103  Q
    |||    
T  20889 tca 20891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 68; Significance: 2e-30; HSPs: 4)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 2900 - 3007
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaag-ccgaaaatcgtgtcacgttttcccaaaatcgt 99  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |  ||||||||   |||||||| |||||||||||||||||||||    
T  2900 tcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacatacccagcaagtttgaaaatcgggtcacgttttcccaaaatcgt 2999  T
Q  100 gtcacgat 107  Q
    | ||||||    
T  3000 gacacgat 3007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 3 - 107
Target Start/End: Original strand, 6094 - 6199
Alignment:
Q  3 gtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaag-ccgaaaatcgtgtcacgttttcccaaaatcgtgt 101  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||| |  ||||||||   |||||||||||||| ||||||||||||| ||     
T  6094 gtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtacccagcaagtttgaaaatcgtgtcacattttcccaaaatcatga 6193  T
Q  102 cacgat 107  Q
    ||||||    
T  6194 cacgat 6199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 132970 - 132863
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaag-ccgaaaatcgtgtcacgttttcccaaaatcgt 99  Q
    ||||| |||| ||| | ||||||||||||||||||||||||||||||||||||||||  ||||||||   ||||||| ||||||| || | |||||||||    
T  132970 tcgtgtcacgattgatacgtacgacccaaggtacgaccaaccttatcctgaaaacttaaccagcaagtttgaaaatcatgtcacgattccacaaaatcgt 132871  T
Q  100 gtcacgat 107  Q
    ||||||||    
T  132870 gtcacgat 132863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 107
Target Start/End: Original strand, 149455 - 149541
Alignment:
Q  18 cgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgat 107  Q
    ||||||||||| |||||||||||||||||   |  ||| |||| |||||||||||||||||| ||| ||||||||||||||| |||||||    
T  149455 cgtacgacccacggtacgaccaaccttat---gtcaacgtgtcaagcaagccgaaaatcgtgacacattttcccaaaatcgtatcacgat 149541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 107
Target Start/End: Complemental strand, 434312 - 434219
Alignment:
Q  16 tgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgtccagcaagcc-gaaaatcgtgtcacgttttcccaaaatcgtgtcacgat 107  Q
    ||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||  |||||||||||||| ||||||||||||||||||||||    
T  434312 tgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaaatcgtgtcacgatttcccaaaatcgtgtcacgat 434219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 57; Significance: 6e-24; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 12 - 107
Target Start/End: Complemental strand, 36512 - 36416
Alignment:
Q  12 ttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaag-ccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgat 107  Q
    |||||||||||||||||||||||||||||||||||||||||||| |  ||||||||   |||||| ||||||||||||| |||||||||| ||||||    
T  36512 ttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtacccagcaagtttgaaaattgtgtcacgttttcacaaaatcgtgccacgat 36416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 43633 - 43553
Alignment:
Q  20 tacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaag-ccgaaaatcgtgtcacgttttcccaaaatcgt 99  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||   ||||||| ||||||| |||| |||||||||    
T  43633 tacgacccaaggtacgaccaaccttatcctgaaaacttaaccagcaagtttgaaaatcatgtcacgatttcacaaaatcgt 43553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 16 - 103
Target Start/End: Complemental strand, 114365 - 114278
Alignment:
Q  16 tgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtca 103  Q
    ||||||||||||||||||| |||||||||||||||||||  ||| |||||||||| ||||||||||||||||||||||| |||||||||    
T  114365 tgcgtacgacccaaggtaccaccaaccttatcctgaaaattttgcccagcaagcc-aaaatcgtgtcacgttttcccaatatcgtgtca 114278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 107
Target Start/End: Original strand, 45623 - 45712
Alignment:
Q  19 gtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaag-ccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgat 107  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||   ||||||||||||||| |||| || ||||||| ||||||    
T  45623 gtacgacccaaggtacgaccaaccttatcctgaaaacttagccagcaagtttgaaaatcgtgtcacgatttcacagaatcgtgccacgat 45712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 6903 - 6820
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacg 84  Q
    |||||||| | ||||||||||||||||||||||| |||||||||||||||||||| |  | ||||||  |||||||||||||||    
T  6903 tcgtgacatggttggtgcgtacgacccaaggtacaaccaaccttatcctgaaaacgttcctagcaagttgaaaatcgtgtcacg 6820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 1284 - 1202
Alignment:
Q  18 cgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaag-ccgaaaatcgtgtcacgttttcccaaaatcgt 99  Q
    ||||||||| ||||||||||||||||||||||||||||||  ||||||||    |||||||||||||| |||| |||||||||    
T  1284 cgtacgaccgaaggtacgaccaaccttatcctgaaaacttaaccagcaagtttaaaaatcgtgtcacgatttcacaaaatcgt 1202  T

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Target: scaffold0140 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 8108 - 8052
Alignment:
Q  1 tcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaactt 57  Q
    ||||| |||| ||| | ||||||||||||||||||||||||||||||||||||||||    
T  8108 tcgtgtcacgattgatacgtacgacccaaggtacgaccaaccttatcctgaaaactt 8052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 100
Target Start/End: Original strand, 86066 - 86095
Alignment:
Q  71 aaaatcgtgtcacgttttcccaaaatcgtg 100  Q
    ||||||||||||||||||||||||||||||    
T  86066 aaaatcgtgtcacgttttcccaaaatcgtg 86095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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