View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17752_high_9 (Length: 473)

Name: NF17752_high_9
Description: NF17752
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17752_high_9
NF17752_high_9
[»] chr7 (8 HSPs)
chr7 (74-231)||(24533102-24533262)
chr7 (131-231)||(12239884-12239984)
chr7 (268-306)||(10254770-10254808)
chr7 (265-303)||(20598016-20598054)
chr7 (373-421)||(5075794-5075843)
chr7 (265-306)||(9762358-9762399)
chr7 (265-301)||(18362010-18362046)
chr7 (374-421)||(28980857-28980905)
[»] chr1 (11 HSPs)
chr1 (268-432)||(11104952-11105121)
chr1 (268-397)||(14968977-14969110)
chr1 (265-308)||(10153708-10153751)
chr1 (265-308)||(23917503-23917546)
chr1 (268-307)||(25399045-25399084)
chr1 (341-421)||(31587309-31587393)
chr1 (341-398)||(16534035-16534093)
chr1 (349-421)||(19965691-19965764)
chr1 (268-314)||(23486305-23486351)
chr1 (341-417)||(15440357-15440433)
chr1 (265-301)||(21684425-21684461)
[»] chr2 (6 HSPs)
chr2 (266-421)||(26704191-26704349)
chr2 (268-306)||(27939657-27939695)
chr2 (132-228)||(34681364-34681461)
chr2 (265-306)||(40202778-40202819)
chr2 (373-421)||(22268332-22268380)
chr2 (277-309)||(24109802-24109834)
[»] chr5 (7 HSPs)
chr5 (266-417)||(19903187-19903342)
chr5 (165-231)||(36202905-36202971)
chr5 (373-421)||(12860226-12860274)
chr5 (341-398)||(36740718-36740776)
chr5 (373-421)||(19642425-19642473)
chr5 (171-231)||(29006264-29006327)
chr5 (341-408)||(22185613-22185681)
[»] chr8 (10 HSPs)
chr8 (266-449)||(34062638-34062824)
chr8 (341-421)||(10649834-10649916)
chr8 (169-231)||(28696345-28696407)
chr8 (342-422)||(12012747-12012827)
chr8 (132-231)||(12729146-12729246)
chr8 (265-308)||(17687648-17687691)
chr8 (341-421)||(6589782-6589863)
chr8 (265-305)||(15598424-15598464)
chr8 (342-421)||(18528392-18528472)
chr8 (268-308)||(24634985-24635025)
[»] chr4 (11 HSPs)
chr4 (348-421)||(13977696-13977770)
chr4 (375-454)||(46979100-46979180)
chr4 (265-306)||(24619321-24619362)
chr4 (357-432)||(12790934-12791010)
chr4 (342-420)||(20243588-20243667)
chr4 (373-418)||(11861834-11861879)
chr4 (143-231)||(20251163-20251252)
chr4 (131-231)||(48780123-48780223)
chr4 (277-309)||(8860346-8860378)
chr4 (265-301)||(13693476-13693512)
chr4 (268-308)||(32468922-32468962)
[»] chr3 (4 HSPs)
chr3 (266-421)||(31779269-31779427)
chr3 (265-305)||(7921142-7921182)
chr3 (265-301)||(16305588-16305624)
chr3 (264-308)||(18122053-18122097)
[»] scaffold0340 (1 HSPs)
scaffold0340 (265-308)||(17636-17679)
[»] chr6 (3 HSPs)
chr6 (341-423)||(30701770-30701853)
chr6 (265-308)||(31720052-31720095)
chr6 (340-421)||(11130499-11130580)
[»] scaffold1190 (1 HSPs)
scaffold1190 (348-421)||(887-961)
[»] scaffold0007 (1 HSPs)
scaffold0007 (131-234)||(215645-215747)
[»] scaffold0040 (1 HSPs)
scaffold0040 (342-407)||(8206-8272)
[»] scaffold0329 (1 HSPs)
scaffold0329 (341-420)||(3958-4038)
[»] scaffold0043 (1 HSPs)
scaffold0043 (265-301)||(2217-2253)


Alignment Details
Target: chr7 (Bit Score: 90; Significance: 3e-43; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 74 - 231
Target Start/End: Original strand, 24533102 - 24533262
Alignment:
Q  74 acaaagataaatcaaaaggttcaaatttaagtttgaaacatttgcataataaatctat--gagaaattcgcaaaatatattggaaagttgtggtggttaa 171  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |  |||||||| ||||| |||||||| |||||| |||||||||    
T  24533102 acaaagataaatcaaaaggttcaaatctaagtttgaaacatttgcattataaatctgtgagagaaatttgcaaagtatattgggaagttgcggtggttaa 24533201  T
Q  172 aaagaga-tcttttaaacaaaatgtgtaatgtttgacaattgtagcaatgtaaccattcat 231  Q
    | ||||| | ||||| | ||||| |||||||||| ||||||||||||||||||||||||||    
T  24533202 atagagatttttttagagaaaatatgtaatgtttaacaattgtagcaatgtaaccattcat 24533262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 131 - 231
Target Start/End: Complemental strand, 12239984 - 12239884
Alignment:
Q  131 tgagaaattcgcaaaatatattggaaagttgtggtggttaaaaagagatcttttaaacaaaatgtgtaatgtttgacaattgtagcaatgtaaccattca 230  Q
    |||||||||  ||||||||||| ||||||||   |||||||| | ||| ||||||   |||| ||||| || ||||||||||  ||||||||||||||||    
T  12239984 tgagaaatttccaaaatatatttgaaagttgcaatggttaaagaaagaccttttagtgaaaaagtgtattgcttgacaattgatgcaatgtaaccattca 12239885  T
Q  231 t 231  Q
    |    
T  12239884 t 12239884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 268 - 306
Target Start/End: Original strand, 10254770 - 10254808
Alignment:
Q  268 aattttttctaaactttcatatcttagaaattcttaagt 306  Q
    ||||| || ||||||||||||||||||||||||||||||    
T  10254770 aatttcttataaactttcatatcttagaaattcttaagt 10254808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 265 - 303
Target Start/End: Complemental strand, 20598054 - 20598016
Alignment:
Q  265 tagaattttttctaaactttcatatcttagaaattctta 303  Q
    |||||||| || |||||||||||||||||||||||||||    
T  20598054 tagaatttcttgtaaactttcatatcttagaaattctta 20598016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 421
Target Start/End: Original strand, 5075794 - 5075843
Alignment:
Q  373 tttatttgattaagatagattgt-agatgtctcttttagttgtgattgag 421  Q
    |||||||||| ||| |||||||| ||| ||||||||||||||||||||||    
T  5075794 tttatttgatcaagttagattgtgagaagtctcttttagttgtgattgag 5075843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 306
Target Start/End: Complemental strand, 9762399 - 9762358
Alignment:
Q  265 tagaattttttctaaactttcatatcttagaaattcttaagt 306  Q
    |||||||| || |||||||||| |||||||||||||||||||    
T  9762399 tagaatttcttataaactttcaaatcttagaaattcttaagt 9762358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 265 - 301
Target Start/End: Original strand, 18362010 - 18362046
Alignment:
Q  265 tagaattttttctaaactttcatatcttagaaattct 301  Q
    |||||||| || |||||||||||||||||||||||||    
T  18362010 tagaatttcttataaactttcatatcttagaaattct 18362046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 374 - 421
Target Start/End: Complemental strand, 28980905 - 28980857
Alignment:
Q  374 ttatttgattaagatagattgt-agatgtctcttttagttgtgattgag 421  Q
    |||||||||||||||||| ||| ||| |||||||||||||||| |||||    
T  28980905 ttatttgattaagatagagtgtgagaagtctcttttagttgtgcttgag 28980857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 1e-20; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 268 - 432
Target Start/End: Complemental strand, 11105121 - 11104952
Alignment:
Q  268 aattttttctaaactttcatatcttagaaattcttaagtctcgtagtccaatttgaactgta-ttgattaca---aagattgtctatcaagtgtaaaacc 363  Q
    ||||| || |||||||||||||||||||||||||||||||    |||||||| |||| |||| |||||||||   | | |||| ||| ||||||||||||    
T  11105121 aatttcttataaactttcatatcttagaaattcttaagtcctagagtccaatctgaattgtatttgattacacctatgcttgtatattaagtgtaaaacc 11105022  T
Q  364 caaacaat-atttatttgattaagatagattgtagatgtctcttttagttgtgattgagaagaggaagtc 432  Q
    ||||||||  |||||||||| ||| | |||||||||  ||||||| | ||||||||||| | ||||||||    
T  11105021 caaacaatcttttatttgataaagtttgattgtagaaatctctttcaattgtgattgagcaaaggaagtc 11104952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 14968977 - 14969110
Alignment:
Q  268 aattttttctaaactttcatatcttagaaattcttaagtctcgtagtccaatttgaactgtattg-attaca---aagattgtctatcaagtgtaaaacc 363  Q
    ||||| || |||||||||||||||||||||||||||||||||  |||||| | ||||||  |||| ||||||     |||||| |||||||||| ||| |    
T  14968977 aatttcttataaactttcatatcttagaaattcttaagtctcaaagtccattatgaacttcattgtattacacctttgattgtatatcaagtgtgaaa-c 14969075  T
Q  364 caaacaat-atttatttgattaagatagattgtag 397  Q
    ||||||||  |||||||||||||| ||||||||||    
T  14969076 caaacaatcttttatttgattaagttagattgtag 14969110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 308
Target Start/End: Complemental strand, 10153751 - 10153708
Alignment:
Q  265 tagaattttttctaaactttcatatcttagaaattcttaagtct 308  Q
    |||||||| || |||||||||||||||||||||||||| |||||    
T  10153751 tagaatttcttataaactttcatatcttagaaattctttagtct 10153708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 308
Target Start/End: Complemental strand, 23917546 - 23917503
Alignment:
Q  265 tagaattttttctaaactttcatatcttagaaattcttaagtct 308  Q
    |||||||| || |||||| |||||||||||||||||||||||||    
T  23917546 tagaatttcttataaactatcatatcttagaaattcttaagtct 23917503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 307
Target Start/End: Complemental strand, 25399084 - 25399045
Alignment:
Q  268 aattttttctaaactttcatatcttagaaattcttaagtc 307  Q
    ||||| || |||||||||||||||||||||||||||||||    
T  25399084 aatttcttataaactttcatatcttagaaattcttaagtc 25399045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 421
Target Start/End: Original strand, 31587309 - 31587393
Alignment:
Q  341 gattgtctatcaagtgtaaaacccaaacaatattt----atttgattaagatagattgtagatgtctcttttagttgtgattgag 421  Q
    |||||| |||||||||||||| ||||||||| |||    ||||||||||| |||||| |||| || ||||||| |||| ||||||    
T  31587309 gattgtatatcaagtgtaaaaaccaaacaatctttttttatttgattaagttagattatagaagtttcttttaattgtaattgag 31587393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 398
Target Start/End: Complemental strand, 16534093 - 16534035
Alignment:
Q  341 gattgtctatcaagtgtaaaacccaaacaatattt-atttgattaagatagattgtaga 398  Q
    |||||| ||||||||||||||| |||| ||| ||| ||||||||||| |||||||||||    
T  16534093 gattgtatatcaagtgtaaaacacaaataattttttatttgattaagttagattgtaga 16534035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 421
Target Start/End: Original strand, 19965691 - 19965764
Alignment:
Q  349 atcaagtgtaaaacccaaacaatattt-atttgattaagatagattgt-agatgtctcttttagttgtgattgag 421  Q
    |||||||||||| || ||||||| ||| ||||||||||| |||||||| | | ||||||||||||||||||||||    
T  19965691 atcaagtgtaaatcc-aaacaatcttttatttgattaagttagattgtgataagtctcttttagttgtgattgag 19965764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 268 - 314
Target Start/End: Complemental strand, 23486351 - 23486305
Alignment:
Q  268 aattttttctaaactttcatatcttagaaattcttaagtctcgtagt 314  Q
    ||||| || ||||||||||||||||||||||||| ||||||| ||||    
T  23486351 aatttcttataaactttcatatcttagaaattctgaagtctcatagt 23486305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 417
Target Start/End: Complemental strand, 15440433 - 15440357
Alignment:
Q  341 gattgtctatcaagtgtaaaacccaaacaatattt-atttgattaagatagattgtagatgtctcttttagttgtgat 417  Q
    |||||| |||||||||||||||  ||||||| ||| |||||||| || |||||||||||  ||||||| |||||||||    
T  15440433 gattgtatatcaagtgtaaaact-aaacaattttttatttgatttagttagattgtagaattctctttcagttgtgat 15440357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 265 - 301
Target Start/End: Original strand, 21684425 - 21684461
Alignment:
Q  265 tagaattttttctaaactttcatatcttagaaattct 301  Q
    |||||||| || |||||||||||||||||||||||||    
T  21684425 tagaatttcttataaactttcatatcttagaaattct 21684461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 1e-17; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 266 - 421
Target Start/End: Complemental strand, 26704349 - 26704191
Alignment:
Q  266 agaattttttctaaactttcatatcttagaaattcttaagtctcgtagtccaatttgaactgtattg-attacaaa---gattgtctatcaagtgtaaaa 361  Q
    ||||||| || |||||||||||||||||||||||| |||||||   |||||| | |||||| || || |||||| |   |||||| |||||||| |||||    
T  26704349 agaatttcttataaactttcatatcttagaaattcgtaagtcttagagtcca-tatgaactttaatgtattacacatctgattgtatatcaagtttaaaa 26704251  T
Q  362 cccaaacaatattt-atttgattaagatagattgtagatgtctcttttagttgtgattgag 421  Q
    || ||||||||||| ||||||||||| |||||| |||| ||||||||  ||||||||||||    
T  26704250 cc-aaacaatattttatttgattaagttagattatagaagtctctttcggttgtgattgag 26704191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 268 - 306
Target Start/End: Complemental strand, 27939695 - 27939657
Alignment:
Q  268 aattttttctaaactttcatatcttagaaattcttaagt 306  Q
    ||||| || ||||||||||||||||||||||||||||||    
T  27939695 aatttcttataaactttcatatcttagaaattcttaagt 27939657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 228
Target Start/End: Complemental strand, 34681461 - 34681364
Alignment:
Q  132 gagaaattcgcaaaatatatt-ggaaagttgtggtggttaaaaagagatcttttaaacaaaatgtgtaatgtttgacaattgtagcaatgtaaccatt 228  Q
    ||||||||  ||||||||||| |||| ||||   |||||||| | | | |||||| | |||| ||||||||||||||||||| |||||||| ||||||    
T  34681461 gagaaattttcaaaatatatttggaatgttgcaatggttaaacataaaccttttagagaaaaagtgtaatgtttgacaattgaagcaatgttaccatt 34681364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 306
Target Start/End: Original strand, 40202778 - 40202819
Alignment:
Q  265 tagaattttttctaaactttcatatcttagaaattcttaagt 306  Q
    |||||||| || ||||||||||||||||| ||||||||||||    
T  40202778 tagaatttcttataaactttcatatcttaaaaattcttaagt 40202819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 373 - 421
Target Start/End: Complemental strand, 22268380 - 22268332
Alignment:
Q  373 tttatttgattaagatagattgtagatgtctcttttagttgtgattgag 421  Q
    |||||||||||||| ||||||||||| |||||||| | || ||||||||    
T  22268380 tttatttgattaagttagattgtagaagtctctttcaattttgattgag 22268332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 277 - 309
Target Start/End: Original strand, 24109802 - 24109834
Alignment:
Q  277 taaactttcatatcttagaaattcttaagtctc 309  Q
    |||||||| ||||||||||||||||||||||||    
T  24109802 taaacttttatatcttagaaattcttaagtctc 24109834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 5e-17; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 266 - 417
Target Start/End: Complemental strand, 19903342 - 19903187
Alignment:
Q  266 agaattttttctaaactttcatatcttagaaattcttaagtctcgtagtccaatttgaactgtattgattacaaa---gattgtctatcaagtgtaaaac 362  Q
    ||||||| || ||||||||||||||||||||||||||||||||   ||| |||| | || | ||||||||||      ||| || |||||||| ||||||    
T  19903342 agaatttcttataaactttcatatcttagaaattcttaagtcttagagttcaatctaaattttattgattactcctctgatcgtatatcaagtataaaac 19903243  T
Q  363 ccaaacaatattt-atttgattaagatagattgtagatgtctcttttagttgtgat 417  Q
    ||||| ||| ||| ||||||||||| || |||||||| ||||||||||||| ||||    
T  19903242 ccaaataatcttttatttgattaagttaaattgtagaagtctcttttagttatgat 19903187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 165 - 231
Target Start/End: Original strand, 36202905 - 36202971
Alignment:
Q  165 tggttaaaaagagatcttttaaacaaaatgtgtaatgtttgacaattgtagcaatgtaaccattcat 231  Q
    |||||||||||||| |||||| | |||| |||||||| |||||||||| | ||||||||||||||||    
T  36202905 tggttaaaaagagaccttttagagaaaaggtgtaatgcttgacaattgaatcaatgtaaccattcat 36202971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 373 - 421
Target Start/End: Original strand, 12860226 - 12860274
Alignment:
Q  373 tttatttgattaagatagattgtagatgtctcttttagttgtgattgag 421  Q
    |||||||||||||| ||||||||||| |||||||| |||||||||||||    
T  12860226 tttatttgattaagttagattgtagaagtctctttcagttgtgattgag 12860274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 398
Target Start/End: Original strand, 36740718 - 36740776
Alignment:
Q  341 gattgtctatcaagtgtaaaacccaaacaat-atttatttgattaagatagattgtaga 398  Q
    |||||| ||||||||||||||||||||||||  ||||||||| |||| |||||||||||    
T  36740718 gattgtatatcaagtgtaaaacccaaacaatcttttatttgactaagttagattgtaga 36740776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 421
Target Start/End: Original strand, 19642425 - 19642473
Alignment:
Q  373 tttatttgattaagatagattgtagatgtctcttttagttgtgattgag 421  Q
    |||||||||||||| ||||||||||| |||||||| | |||||||||||    
T  19642425 tttatttgattaagttagattgtagaagtctctttcaattgtgattgag 19642473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 29006264 - 29006327
Alignment:
Q  171 aaaagagatctttta---aacaaaatgtgtaatgtttgacaattgtagcaatgtaaccattcat 231  Q
    |||||||||||||||   || |||| ||||||||||| || |||| ||||||||||||||||||    
T  29006264 aaaagagatcttttagaaaaaaaaaagtgtaatgttttacgattgaagcaatgtaaccattcat 29006327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 341 - 408
Target Start/End: Complemental strand, 22185681 - 22185613
Alignment:
Q  341 gattgtctatcaagtgtaaaacccaaacaatattt-atttgattaagatagattgtagatgtctctttt 408  Q
    |||||| ||||||||||||||  | |||||| ||| ||||||||||| |||||| ||||||||| ||||    
T  22185681 gattgtatatcaagtgtaaaaatctaacaatcttttatttgattaagttagattatagatgtctttttt 22185613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 266 - 449
Target Start/End: Original strand, 34062638 - 34062824
Alignment:
Q  266 agaattttttctaaactttcatatcttagaaattcttaagtctcgtagtccaatttgaactgtattgattaca---aagattgtctatcaagtgtaaaac 362  Q
    ||||||| || ||||||||||||||||| |||| |||| || |   |||| ||| |||| |||||||||||||   | |||  | |||||||||||||||    
T  34062638 agaatttcttataaactttcatatcttaaaaatccttatgtttaa-agtcgaatatgaattgtattgattacacttatgatattatatcaagtgtaaaac 34062736  T
Q  363 ccaaacaatattt-atttgattaagatagattgtagatgtctcttttagttgtgattgagaagaggaagtcattttgttatgtgattg 449  Q
    | ||||||||||| ||||  ||||| ||||| ||||| |||||||| | || |||||||| |||| |||||  ||| |||||||||||    
T  34062737 ctaaacaatattttatttagttaagttagatcgtagaagtctctttcaattatgattgagtagagaaagtctctttcttatgtgattg 34062824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 341 - 421
Target Start/End: Original strand, 10649834 - 10649916
Alignment:
Q  341 gattgtctatcaagtgtaaaacccaaacaata-tttatttgattaagatagattgt-agatgtctcttttagttgtgattgag 421  Q
    |||||| |||||||||||||| ||||| |||| ||||||| |||||| |||||||| ||| |||||||| |||||||||||||    
T  10649834 gattgtatatcaagtgtaaaaaccaaataatattttattttattaagttagattgtaagaagtctctttcagttgtgattgag 10649916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 169 - 231
Target Start/End: Complemental strand, 28696407 - 28696345
Alignment:
Q  169 taaaaagagatcttttaaacaaaatgtgtaatgtttgacaattgtagcaatgtaaccattcat 231  Q
    |||| |||||||||||| | ||||||||||||| || ||||||| ||||||||||||||||||    
T  28696407 taaatagagatcttttagagaaaatgtgtaatgcttaacaattgaagcaatgtaaccattcat 28696345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 422
Target Start/End: Original strand, 12012747 - 12012827
Alignment:
Q  342 attgtctatcaagtgtaaaacccaaacaatatttatttgattaagatagattgtagatgtctcttttagttgtgattgaga 422  Q
    ||||| |||||  ||||||||  ||||||| |||| ||||||||| |||||||||||  ||||||| ||||||||||||||    
T  12012747 attgtatatcatatgtaaaacttaaacaatctttaattgattaagttagattgtagaaatctctttcagttgtgattgaga 12012827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 132 - 231
Target Start/End: Original strand, 12729146 - 12729246
Alignment:
Q  132 gagaaattcgcaaaatatatt-ggaaagttgtggtggttaaaaagagatcttttaaacaaaatgtgtaatgtttgacaattgtagcaatgtaaccattca 230  Q
    ||||||||  ||||||||||| |||||||||   |||||||| ||||| |||||| | |||| |||||||| | |||||||| |||||| ||||||||||    
T  12729146 gagaaatttccaaaatatatttggaaagttgcaatggttaaatagagaccttttagagaaaaggtgtaatgctcgacaattgaagcaatataaccattca 12729245  T
Q  231 t 231  Q
    |    
T  12729246 t 12729246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 265 - 308
Target Start/End: Complemental strand, 17687691 - 17687648
Alignment:
Q  265 tagaattttttctaaactttcatatcttagaaattcttaagtct 308  Q
    |||||||| || ||||||||||||||||||||||||||||||||    
T  17687691 tagaatttcttataaactttcatatcttagaaattcttaagtct 17687648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 341 - 421
Target Start/End: Original strand, 6589782 - 6589863
Alignment:
Q  341 gattgtctatcaagtgtaaaacccaaacaatatttatttgattaagatagatt-gtagatgtctcttttagttgtgattgag 421  Q
    |||||| |||||| |||||||| ||||| || |||||||||||||| ||||||  |||| ||||| || |||||||||||||    
T  6589782 gattgtatatcaaatgtaaaactcaaacgatctttatttgattaagttagattattagaagtctcattcagttgtgattgag 6589863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 265 - 305
Target Start/End: Complemental strand, 15598464 - 15598424
Alignment:
Q  265 tagaattttttctaaactttcatatcttagaaattcttaag 305  Q
    |||||||| || |||||||||||||||||||||||||||||    
T  15598464 tagaatttcttataaactttcatatcttagaaattcttaag 15598424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 342 - 421
Target Start/End: Original strand, 18528392 - 18528472
Alignment:
Q  342 attgtctatcaagtgtaaaacccaaacaatattt-atttgattaagatagattgtagatgtctcttttagttgtgattgag 421  Q
    ||||| |||||||| |||||  |||||||| ||| ||||||||||| | | ||||||| |||||||| |||||||||||||    
T  18528392 attgtatatcaagtataaaaatcaaacaatcttttatttgattaagttggtttgtagaagtctctttcagttgtgattgag 18528472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 268 - 308
Target Start/End: Complemental strand, 24635025 - 24634985
Alignment:
Q  268 aattttttctaaactttcatatcttagaaattcttaagtct 308  Q
    ||||| || ||||||||||||||||||||||||||||||||    
T  24635025 aatttcttataaactttcatatcttagaaattcttaagtct 24634985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 348 - 421
Target Start/End: Original strand, 13977696 - 13977770
Alignment:
Q  348 tatcaagtgtaaaacccaaacaatattt-atttgattaagatagattgtagatgtctcttttagttgtgattgag 421  Q
    ||||||| |||||||||||||||| ||| ||||||||||| || |||||||| |||| ||| |||||||||||||    
T  13977696 tatcaagcgtaaaacccaaacaattttttatttgattaagttaaattgtagaagtctttttcagttgtgattgag 13977770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 454
Target Start/End: Complemental strand, 46979180 - 46979100
Alignment:
Q  375 tatttgattaagatagattgtagatgtctctttt-agttgtgattgagaagaggaagtcattttgttatgtgattgggcaa 454  Q
    |||||||||||| ||||||||||| ||||||||| ||||||||||||| |||  |||||  ||| ||||||||||| ||||    
T  46979180 tatttgattaagttagattgtagaagtctcttttcagttgtgattgagcagaaaaagtctatttcttatgtgattgagcaa 46979100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 265 - 306
Target Start/End: Complemental strand, 24619362 - 24619321
Alignment:
Q  265 tagaattttttctaaactttcatatcttagaaattcttaagt 306  Q
    |||||||| || ||||||||||||||||||||||||||||||    
T  24619362 tagaatttcttataaactttcatatcttagaaattcttaagt 24619321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 357 - 432
Target Start/End: Complemental strand, 12791010 - 12790934
Alignment:
Q  357 taaaacccaaacaatattt-atttgattaagatagattgtagatgtctcttttagttgtgattgagaagaggaagtc 432  Q
    |||||| |||||||| ||| || |||||||| ||||||||||| || ||||| | ||||||||||| ||||||||||    
T  12791010 taaaactcaaacaattttttatatgattaagttagattgtagaagtttctttcatttgtgattgagtagaggaagtc 12790934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 342 - 420
Target Start/End: Complemental strand, 20243667 - 20243588
Alignment:
Q  342 attgtctatcaagtgtaaaacccaaacaatattt-atttgattaagatagattgt-agatgtctcttttagttgtgattga 420  Q
    ||||| |||||||||||||||| ||||||| ||| ||||||||||| |||||||| ||| |||||||| ||||||| ||||    
T  20243667 attgtatatcaagtgtaaaacc-aaacaatcttttatttgattaagttagattgtaagaagtctctttcagttgtggttga 20243588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 418
Target Start/End: Complemental strand, 11861879 - 11861834
Alignment:
Q  373 tttatttgattaagatagattgtagatgtctcttttagttgtgatt 418  Q
    ||||| |||||||  ||||||||||| |||||||||||||||||||    
T  11861879 tttatctgattaaattagattgtagaagtctcttttagttgtgatt 11861834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 143 - 231
Target Start/End: Original strand, 20251163 - 20251252
Alignment:
Q  143 aaaatatatt-ggaaagttgtggtggttaaaaagagatcttttaaacaaaatgtgtaatgtttgacaattgtagcaatgtaaccattcat 231  Q
    |||||||||| |||||||||   | |||||| |||||||||||| | |||| ||||| ||||||| ||||| | ||||||||| ||||||    
T  20251163 aaaatatatttggaaagttgcaattgttaaatagagatcttttagagaaaaagtgtattgtttgataattgaaacaatgtaactattcat 20251252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 231
Target Start/End: Complemental strand, 48780223 - 48780123
Alignment:
Q  131 tgagaaattcgcaaaatatatt-ggaaagttgtggtggttaaaaagagatcttttaaacaaaatgtgtaatgtttgacaattgtagcaatgtaaccattc 229  Q
    |||||||||  ||||||||||| |||||||||   || ||||| | |||||||||| | |||| || |||||||||||||||| |||||| |||| ||||    
T  48780223 tgagaaattttcaaaatatatttggaaagttgcaatgattaaaca-agatcttttagagaaaaggtataatgtttgacaattgaagcaatataactattc 48780125  T
Q  230 at 231  Q
    ||    
T  48780124 at 48780123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 277 - 309
Target Start/End: Complemental strand, 8860378 - 8860346
Alignment:
Q  277 taaactttcatatcttagaaattcttaagtctc 309  Q
    ||||||||||||||||||||||||||| |||||    
T  8860378 taaactttcatatcttagaaattcttatgtctc 8860346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 265 - 301
Target Start/End: Complemental strand, 13693512 - 13693476
Alignment:
Q  265 tagaattttttctaaactttcatatcttagaaattct 301  Q
    |||||||| || |||||||||||||||||||||||||    
T  13693512 tagaatttcttataaactttcatatcttagaaattct 13693476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 268 - 308
Target Start/End: Original strand, 32468922 - 32468962
Alignment:
Q  268 aattttttctaaactttcatatcttagaaattcttaagtct 308  Q
    ||||| || ||||||||||||||||| ||||||||||||||    
T  32468922 aatttcttataaactttcatatcttataaattcttaagtct 32468962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000003; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 266 - 421
Target Start/End: Complemental strand, 31779427 - 31779269
Alignment:
Q  266 agaattttttctaaactttcatatcttagaaattcttaagtctcgtagtccaatttgaactgtattgattacaaa---gattgtctatcaagtgtaaaac 362  Q
    ||||||| || |||||||| |||||||| ||||||||||  ||   |||||||| || | |||||||||||||     |||||| |||||||||||||||    
T  31779427 agaatttcttataaacttttatatcttataaattcttaacacttagagtccaatatgtattgtattgattacacctttgattgtatatcaagtgtaaaac 31779328  T
Q  363 ccaaacaata-tttatttgattaagatagattgtagatgtctcttttagttgtgattgag 421  Q
    || || |||| ||||||| |||||| ||||||| ||| |||||||| | || ||||||||    
T  31779327 cc-aataatattttatttaattaagttagattgcagaagtctctttcaattatgattgag 31779269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 265 - 305
Target Start/End: Original strand, 7921142 - 7921182
Alignment:
Q  265 tagaattttttctaaactttcatatcttagaaattcttaag 305  Q
    |||||||| || |||||||||||||||||||||||| ||||    
T  7921142 tagaatttcttataaactttcatatcttagaaattcataag 7921182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 265 - 301
Target Start/End: Original strand, 16305588 - 16305624
Alignment:
Q  265 tagaattttttctaaactttcatatcttagaaattct 301  Q
    |||||||| || |||||||||||||||||||||||||    
T  16305588 tagaatttcttataaactttcatatcttagaaattct 16305624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 308
Target Start/End: Original strand, 18122053 - 18122097
Alignment:
Q  264 ctagaattttttctaaactttcatatcttagaaattcttaagtct 308  Q
    ||||||||| || | ||||||||||||||||||||||| ||||||    
T  18122053 ctagaatttcttatcaactttcatatcttagaaattctaaagtct 18122097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 265 - 308
Target Start/End: Complemental strand, 17679 - 17636
Alignment:
Q  265 tagaattttttctaaactttcatatcttagaaattcttaagtct 308  Q
    |||||||| || ||||||||||||||||||||||||||||||||    
T  17679 tagaatttcttataaactttcatatcttagaaattcttaagtct 17636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000004; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 341 - 423
Target Start/End: Original strand, 30701770 - 30701853
Alignment:
Q  341 gattgtctatcaagtgtaaaacccaaacaatattt-atttgattaagatagattgtagatgtctcttttagttgtgattgagaa 423  Q
    |||||| ||||||||||||||  |||||| | ||| || | |||||| ||||||||||| ||||| ||||||||||||||||||    
T  30701770 gattgtatatcaagtgtaaaaatcaaacagtcttttatctaattaagttagattgtagaagtctcatttagttgtgattgagaa 30701853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 308
Target Start/End: Original strand, 31720052 - 31720095
Alignment:
Q  265 tagaattttttctaaactttcatatcttagaaattcttaagtct 308  Q
    |||||||| || |||| |||||||||||||||||||||||||||    
T  31720052 tagaatttcttataaattttcatatcttagaaattcttaagtct 31720095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 421
Target Start/End: Complemental strand, 11130580 - 11130499
Alignment:
Q  340 agattgtctatcaagtgtaaaacccaaacaatattt-atttgattaagatagattgtagatgtctcttttagttgtgattgag 421  Q
    ||||||| |||||  ||||||||| ||||||| ||| ||||||||||| ||| ||||||| |||||||| || ||||||||||    
T  11130580 agattgtatatcatttgtaaaacc-aaacaatcttttatttgattaagttagcttgtagacgtctctttcagctgtgattgag 11130499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1190 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold1190
Description:

Target: scaffold1190; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 421
Target Start/End: Complemental strand, 961 - 887
Alignment:
Q  348 tatcaagtgtaaaacccaaacaatatttatttgattaagatagatt-gtagatgtctcttttagttgtgattgag 421  Q
    |||||| |||||||| ||||| || |||||||||||||| ||||||  |||| |||||||| |||||||||||||    
T  961 tatcaaatgtaaaactcaaacgatctttatttgattaagttagattattagaagtctctttcagttgtgattgag 887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 131 - 234
Target Start/End: Original strand, 215645 - 215747
Alignment:
Q  131 tgagaaattcgcaaaatatattg-gaaagttgtggtggttaaaaagagatcttttaaacaaaatgtgtaatgtttgacaattgtagcaatgtaaccattc 229  Q
    |||||||||  |||||||||||  ||||||||   |||||||| ||||||||||| || ||||| ||||||||||||| |||| ||   |||||||||||    
T  215645 tgagaaatttccaaaatatatttagaaagttgcaatggttaaatagagatcttttgaagaaaatatgtaatgtttgacgattgaag--ttgtaaccattc 215742  T
Q  230 ataaa 234  Q
    |||||    
T  215743 ataaa 215747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 407
Target Start/End: Original strand, 8206 - 8272
Alignment:
Q  342 attgtctatcaagtgtaaaacccaaacaat-atttatttgattaagatagattgtagatgtctcttt 407  Q
    ||||| |||||||||||||| |||||||||  |||||||||||| | |||| |||||| ||||||||    
T  8206 attgtatatcaagtgtaaaagccaaacaatcttttatttgattaggttagaatgtagaagtctcttt 8272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0329 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0329
Description:

Target: scaffold0329; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 420
Target Start/End: Complemental strand, 4038 - 3958
Alignment:
Q  341 gattgtctatcaagtgtaaaacccaaacaata-tttatttgattaagatagattgta-gatgtctcttttagttgtgattga 420  Q
    |||||| |||||||| ||||||| |||||||  ||||||| || ||| ||||||||| || |||||||||||||||||||||    
T  4038 gattgtatatcaagtataaaacc-aaacaattgtttatttaataaagttagattgtaagaagtctcttttagttgtgattga 3958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 265 - 301
Target Start/End: Original strand, 2217 - 2253
Alignment:
Q  265 tagaattttttctaaactttcatatcttagaaattct 301  Q
    |||||||| || |||||||||||||||||||||||||    
T  2217 tagaatttcttataaactttcatatcttagaaattct 2253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University