View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17754_low_24 (Length: 274)
Name: NF17754_low_24
Description: NF17754
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17754_low_24 |
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Alignment Details
Target: chr3 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 12 - 257
Target Start/End: Original strand, 46559316 - 46559561
Alignment:
| Q |
12 |
agaagaacaaatggtagagtttgaattggaaaattgatgttaatgtttccttcgtgggagtttctctaaactctctctaccaaataatcaatacaacaac |
111 |
Q |
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| T |
46559316 |
agaagaacaaatggtagagtttgaattggaaaattgatgttaatgtttccttcgtgggagtttctctaaactctctctaccaaataatcaatacaacaac |
46559415 |
T |
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| Q |
112 |
aaaacactctgaatgaggacttcaacaaaaacaaacaccaatgactcctactactactaacaaatcttgttcttcttcttcaagccaaggtagtaaagga |
211 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46559416 |
aaaacactctgaatgaggacttcaacaaaaacaaacaccaatgactcctactactactaacaaatcttgttcttcttcttcaagccaaggtagtaaagga |
46559515 |
T |
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| Q |
212 |
caatcgattcaacaacgtaggcttactagacagaaaaggttatgtt |
257 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46559516 |
caatcgattcaacaacgtaggcttactagacagaaaaggttatgtt |
46559561 |
T |
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